HEADER ISOMERASE 20-NOV-24 9KOJ TITLE CRYSTAL STRUCTURE OF THE ISOMERASE ART22 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ART22; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ISOMERIZATION, OXYGENATION, CLEAVAGE OF KETOHEXOSE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.GUO,P.W.LI,D.F.LI,Y.H.CHEN REVDAT 2 22-OCT-25 9KOJ 1 JRNL REVDAT 1 30-JUL-25 9KOJ 0 JRNL AUTH P.LI,D.WANG,L.GUO,Y.CHEN,H.MAO,Z.ZHAO,M.WANG,M.CHEN,Z.XU, JRNL AUTH 2 B.WANG,D.LI,Y.CHEN JRNL TITL OXIDATIVE CLEAVAGE OF HEXOPYRANOSE BY A TIM-BARREL ISOMERASE JRNL REF NAT CATAL 2025 JRNL REFN ESSN 2520-1158 JRNL DOI 10.1038/S41929-025-01412-8 REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 98510 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.5990 - 3.4810 1.00 7304 151 0.1613 0.1704 REMARK 3 2 3.4810 - 2.7633 1.00 7022 146 0.1804 0.2161 REMARK 3 3 2.7633 - 2.4140 1.00 6988 144 0.1826 0.2205 REMARK 3 4 2.4140 - 2.1933 1.00 6928 144 0.1778 0.1878 REMARK 3 5 2.1933 - 2.0362 1.00 6905 143 0.1718 0.1901 REMARK 3 6 2.0362 - 1.9161 1.00 6897 143 0.1812 0.2175 REMARK 3 7 1.9161 - 1.8202 1.00 6866 143 0.1930 0.2509 REMARK 3 8 1.8202 - 1.7409 1.00 6870 141 0.1823 0.2097 REMARK 3 9 1.7409 - 1.6739 1.00 6853 143 0.1815 0.2214 REMARK 3 10 1.6739 - 1.6161 1.00 6819 142 0.1777 0.1897 REMARK 3 11 1.6161 - 1.5656 1.00 6850 141 0.1875 0.2220 REMARK 3 12 1.5656 - 1.5209 1.00 6827 142 0.1998 0.2112 REMARK 3 13 1.5209 - 1.4808 1.00 6825 140 0.2141 0.2377 REMARK 3 14 1.4808 - 1.4450 0.96 6558 135 0.2539 0.2762 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4461 REMARK 3 ANGLE : 0.941 6020 REMARK 3 CHIRALITY : 0.079 684 REMARK 3 PLANARITY : 0.006 777 REMARK 3 DIHEDRAL : 3.769 1686 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6282 0.7857 -9.3422 REMARK 3 T TENSOR REMARK 3 T11: 0.1495 T22: 0.1564 REMARK 3 T33: 0.1495 T12: -0.0129 REMARK 3 T13: 0.0039 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.4340 L22: 0.2619 REMARK 3 L33: 0.5540 L12: -0.0222 REMARK 3 L13: -0.5068 L23: -0.0885 REMARK 3 S TENSOR REMARK 3 S11: -0.0107 S12: 0.0392 S13: 0.0239 REMARK 3 S21: 0.0884 S22: 0.0296 S23: 0.0180 REMARK 3 S31: 0.0734 S32: -0.0742 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3410 5.7452 -18.2357 REMARK 3 T TENSOR REMARK 3 T11: 0.1503 T22: 0.1456 REMARK 3 T33: 0.1400 T12: 0.0074 REMARK 3 T13: -0.0043 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 0.5663 L22: 0.4940 REMARK 3 L33: 0.1355 L12: 0.2269 REMARK 3 L13: -0.2082 L23: -0.2024 REMARK 3 S TENSOR REMARK 3 S11: 0.0211 S12: -0.0003 S13: 0.0471 REMARK 3 S21: -0.0393 S22: 0.0523 S23: 0.0666 REMARK 3 S31: 0.0469 S32: -0.0418 S33: 0.0020 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 75 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5103 2.7475 -25.6322 REMARK 3 T TENSOR REMARK 3 T11: 0.1378 T22: 0.1220 REMARK 3 T33: 0.1360 T12: -0.0050 REMARK 3 T13: 0.0025 T23: 0.0185 REMARK 3 L TENSOR REMARK 3 L11: 0.2705 L22: 0.4141 REMARK 3 L33: 0.1839 L12: 0.1166 REMARK 3 L13: -0.0724 L23: -0.1035 REMARK 3 S TENSOR REMARK 3 S11: -0.0126 S12: 0.0260 S13: 0.0055 REMARK 3 S21: -0.0897 S22: 0.0539 S23: 0.0240 REMARK 3 S31: -0.0067 S32: -0.0359 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 113 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.9103 3.7753 -25.4607 REMARK 3 T TENSOR REMARK 3 T11: 0.1518 T22: 0.1582 REMARK 3 T33: 0.1170 T12: -0.0005 REMARK 3 T13: 0.0113 T23: 0.0189 REMARK 3 L TENSOR REMARK 3 L11: 0.5508 L22: 0.4835 REMARK 3 L33: 0.1391 L12: 0.5488 REMARK 3 L13: -0.1377 L23: -0.0982 REMARK 3 S TENSOR REMARK 3 S11: 0.0190 S12: 0.1438 S13: 0.0405 REMARK 3 S21: -0.0319 S22: -0.0570 S23: -0.1731 REMARK 3 S31: -0.0260 S32: 0.0408 S33: -0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 138 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.6306 2.9550 -12.6052 REMARK 3 T TENSOR REMARK 3 T11: 0.1528 T22: 0.1406 REMARK 3 T33: 0.1346 T12: -0.0137 REMARK 3 T13: 0.0039 T23: 0.0215 REMARK 3 L TENSOR REMARK 3 L11: 0.4967 L22: 0.2174 REMARK 3 L33: 0.6814 L12: -0.3581 REMARK 3 L13: 0.2219 L23: 0.0890 REMARK 3 S TENSOR REMARK 3 S11: 0.0332 S12: -0.0702 S13: 0.0186 REMARK 3 S21: 0.0333 S22: 0.0059 S23: 0.0149 REMARK 3 S31: 0.0540 S32: 0.0120 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 185 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7375 8.9272 -5.3950 REMARK 3 T TENSOR REMARK 3 T11: 0.1670 T22: 0.1931 REMARK 3 T33: 0.1559 T12: -0.0233 REMARK 3 T13: -0.0035 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 0.1269 L22: 0.3143 REMARK 3 L33: 0.1385 L12: -0.0486 REMARK 3 L13: -0.1475 L23: -0.0551 REMARK 3 S TENSOR REMARK 3 S11: 0.0806 S12: -0.1999 S13: 0.1128 REMARK 3 S21: 0.0110 S22: -0.0316 S23: -0.0254 REMARK 3 S31: 0.0014 S32: 0.0916 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 202 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.9204 -12.2575 -1.3747 REMARK 3 T TENSOR REMARK 3 T11: 0.1715 T22: 0.2097 REMARK 3 T33: 0.5535 T12: 0.0095 REMARK 3 T13: -0.0408 T23: 0.0685 REMARK 3 L TENSOR REMARK 3 L11: 0.1786 L22: 0.1810 REMARK 3 L33: 1.1319 L12: -0.0941 REMARK 3 L13: 0.2344 L23: -0.0166 REMARK 3 S TENSOR REMARK 3 S11: 0.1165 S12: -0.2361 S13: -0.8051 REMARK 3 S21: 0.0876 S22: 0.0025 S23: -0.5906 REMARK 3 S31: 0.0378 S32: -0.0531 S33: 0.0388 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 221 THROUGH 278 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4112 3.5463 1.8462 REMARK 3 T TENSOR REMARK 3 T11: 0.1495 T22: 0.2273 REMARK 3 T33: 0.1213 T12: -0.0236 REMARK 3 T13: 0.0046 T23: -0.0207 REMARK 3 L TENSOR REMARK 3 L11: 1.5945 L22: 0.4872 REMARK 3 L33: 0.9777 L12: 0.0746 REMARK 3 L13: -0.1816 L23: -0.1216 REMARK 3 S TENSOR REMARK 3 S11: 0.0107 S12: -0.3646 S13: -0.0118 REMARK 3 S21: 0.0576 S22: -0.0210 S23: -0.0299 REMARK 3 S31: -0.0910 S32: 0.1073 S33: -0.0006 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.5872 -25.4753 -21.5827 REMARK 3 T TENSOR REMARK 3 T11: 0.1485 T22: 0.1319 REMARK 3 T33: 0.1697 T12: 0.0028 REMARK 3 T13: -0.0046 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.2368 L22: 0.2525 REMARK 3 L33: 0.3251 L12: -0.2171 REMARK 3 L13: 0.0445 L23: -0.1113 REMARK 3 S TENSOR REMARK 3 S11: -0.0196 S12: 0.0074 S13: 0.0197 REMARK 3 S21: 0.0597 S22: -0.0020 S23: -0.0275 REMARK 3 S31: 0.0211 S32: 0.1172 S33: 0.0001 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.7965 -21.9400 -31.0489 REMARK 3 T TENSOR REMARK 3 T11: 0.1507 T22: 0.1525 REMARK 3 T33: 0.1548 T12: -0.0054 REMARK 3 T13: 0.0064 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 0.7335 L22: 0.1762 REMARK 3 L33: 0.9667 L12: 0.2422 REMARK 3 L13: 0.0185 L23: -0.0867 REMARK 3 S TENSOR REMARK 3 S11: 0.0443 S12: 0.0543 S13: 0.0072 REMARK 3 S21: 0.0370 S22: -0.0685 S23: -0.0054 REMARK 3 S31: -0.0928 S32: 0.1559 S33: 0.0003 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5505 -14.0432 -33.5416 REMARK 3 T TENSOR REMARK 3 T11: 0.1507 T22: 0.1413 REMARK 3 T33: 0.1331 T12: -0.0013 REMARK 3 T13: 0.0194 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 0.4600 L22: -0.0016 REMARK 3 L33: 0.5080 L12: -0.0584 REMARK 3 L13: -0.0487 L23: 0.3793 REMARK 3 S TENSOR REMARK 3 S11: 0.0155 S12: 0.0223 S13: 0.0505 REMARK 3 S21: -0.0176 S22: 0.0397 S23: 0.0040 REMARK 3 S31: -0.0680 S32: 0.0870 S33: 0.0005 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0874 -20.9918 -28.5588 REMARK 3 T TENSOR REMARK 3 T11: 0.1429 T22: 0.1371 REMARK 3 T33: 0.1256 T12: 0.0085 REMARK 3 T13: -0.0053 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.9802 L22: 0.7271 REMARK 3 L33: 0.4785 L12: 0.1842 REMARK 3 L13: -0.3991 L23: 0.0365 REMARK 3 S TENSOR REMARK 3 S11: 0.0392 S12: 0.0370 S13: -0.0585 REMARK 3 S21: 0.0303 S22: -0.0370 S23: 0.0478 REMARK 3 S31: -0.0145 S32: -0.0838 S33: 0.0001 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 185 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4966 -33.7040 -25.3189 REMARK 3 T TENSOR REMARK 3 T11: 0.1523 T22: 0.1514 REMARK 3 T33: 0.2320 T12: -0.0134 REMARK 3 T13: -0.0140 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 0.1242 L22: 0.2609 REMARK 3 L33: 0.2027 L12: -0.1918 REMARK 3 L13: -0.0025 L23: 0.0138 REMARK 3 S TENSOR REMARK 3 S11: 0.0356 S12: -0.0163 S13: -0.1868 REMARK 3 S21: 0.0633 S22: -0.0407 S23: 0.1707 REMARK 3 S31: 0.0246 S32: -0.0805 S33: 0.0001 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 202 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4480 -23.5112 -6.6471 REMARK 3 T TENSOR REMARK 3 T11: 0.1735 T22: 0.4340 REMARK 3 T33: 0.2646 T12: 0.0173 REMARK 3 T13: 0.0194 T23: -0.0420 REMARK 3 L TENSOR REMARK 3 L11: 0.0206 L22: 0.3006 REMARK 3 L33: 0.2814 L12: -0.0236 REMARK 3 L13: 0.0005 L23: -0.0483 REMARK 3 S TENSOR REMARK 3 S11: 0.0400 S12: -0.4339 S13: 0.2354 REMARK 3 S21: -0.0102 S22: -0.1843 S23: 0.2232 REMARK 3 S31: -0.0450 S32: -0.4214 S33: -0.0045 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 220 THROUGH 278 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.5926 -35.4728 -16.2239 REMARK 3 T TENSOR REMARK 3 T11: 0.1606 T22: 0.1391 REMARK 3 T33: 0.2397 T12: -0.0060 REMARK 3 T13: -0.0097 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 1.5199 L22: 0.7256 REMARK 3 L33: 0.6931 L12: 0.0951 REMARK 3 L13: 0.1501 L23: -0.3295 REMARK 3 S TENSOR REMARK 3 S11: -0.0317 S12: -0.1860 S13: -0.3016 REMARK 3 S21: -0.0234 S22: 0.0493 S23: 0.0809 REMARK 3 S31: 0.0815 S32: 0.0210 S33: 0.0130 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9KOJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-APR-24. REMARK 100 THE DEPOSITION ID IS D_1300053856. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 98532 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.445 REMARK 200 RESOLUTION RANGE LOW (A) : 37.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.11180 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.69860 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.03M CITRIC ACID, 0.07M BIS-TRIS REMARK 280 PROPANE, 20% W/V POLYETHYLENE GLYCOL 3350, PH 7.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.23000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.19900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.00250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.19900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.23000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.00250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 GLY A 279 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 GLY B 279 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN B 210 O HOH B 401 1.88 REMARK 500 OE2 GLU B 164 OH TYR B 195 2.02 REMARK 500 O PRO A 223 O HOH B 401 2.06 REMARK 500 O HOH B 548 O HOH B 562 2.08 REMARK 500 NE2 GLN B 118 O HOH B 402 2.12 REMARK 500 OE2 GLU A 164 OH TYR A 195 2.15 REMARK 500 NE2 GLN B 118 O HOH B 403 2.15 REMARK 500 OE2 GLU B 190 O HOH B 404 2.18 REMARK 500 NZ LYS A 129 O HOH A 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 152 48.53 -80.45 REMARK 500 PHE A 153 46.87 -156.52 REMARK 500 PRO B 152 48.21 -80.94 REMARK 500 PHE B 153 48.09 -153.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 144 OE1 REMARK 620 2 ASP A 174 OD2 88.4 REMARK 620 3 HIS A 200 ND1 88.5 109.4 REMARK 620 4 GLU A 252 OE1 174.1 88.0 88.3 REMARK 620 5 HOH A 420 O 97.3 85.5 164.2 87.1 REMARK 620 6 HOH A 540 O 88.5 162.1 88.1 96.4 77.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 144 OE1 REMARK 620 2 ASP B 174 OD2 87.4 REMARK 620 3 HIS B 200 ND1 90.7 111.4 REMARK 620 4 GLU B 252 OE1 172.9 88.1 85.9 REMARK 620 5 HOH B 416 O 94.6 85.5 162.6 90.5 REMARK 620 6 HOH B 549 O 87.6 161.2 86.8 98.3 76.8 REMARK 620 N 1 2 3 4 5 DBREF 9KOJ A -19 279 PDB 9KOJ 9KOJ -19 279 DBREF 9KOJ B -19 279 PDB 9KOJ 9KOJ -19 279 SEQRES 1 A 299 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 299 LEU VAL PRO ARG GLY SER HIS MET LYS PHE SER LEU MET SEQRES 3 A 299 THR TYR SER MET VAL SER LEU MET ARG SER GLY GLU MET SEQRES 4 A 299 ASN LEU GLU ASP VAL ILE ALA PHE ALA ALA ASN GLU GLY SEQRES 5 A 299 PHE ASP ALA ILE GLU LEU LEU MET VAL ASN PHE SER ARG SEQRES 6 A 299 SER SER ASP GLU ILE ARG ARG MET LEU GLU THR HIS GLN SEQRES 7 A 299 MET LYS ILE SER CYS ILE ASP ALA PHE VAL ASP LEU ALA SEQRES 8 A 299 ALA GLN GLN GLU GLU ASN PHE LEU GLU ASN ILE SER LEU SEQRES 9 A 299 SER GLN ARG ILE ILE ASP GLN ALA VAL GLU LEU SER ALA SEQRES 10 A 299 PRO MET VAL MET LEU VAL PRO GLY PHE PRO ASP LEU ILE SEQRES 11 A 299 ALA SER GLU LYS ASP LYS GLN GLN ALA LEU PRO ARG ILE SEQRES 12 A 299 ILE SER ALA LEU GLN LYS ILE THR PRO TYR ALA GLN SER SEQRES 13 A 299 LYS GLY ILE VAL LEU THR ILE GLU ASN TYR SER ALA LEU SEQRES 14 A 299 GLN MET PRO PHE CYS SER ILE ALA GLU VAL LEU THR ILE SEQRES 15 A 299 LEU GLU GLN VAL PRO GLY LEU ARG LEU THR LEU ASP TYR SEQRES 16 A 299 GLY ASN MET LEU VAL ALA GLY GLU ASP PRO LEU GLU ALA SEQRES 17 A 299 TYR GLU LYS LEU ARG LYS TYR ILE VAL ASN ALA HIS LEU SEQRES 18 A 299 LYS ASP TRP LYS VAL THR SER GLY GLN THR GLY THR ARG SEQRES 19 A 299 CYS ALA ASP GLY ARG HIS LEU GLU PRO SER LEU HIS GLY SEQRES 20 A 299 GLN GLY VAL ILE ASN PHE LYS SER LEU PHE ALA GLU MET SEQRES 21 A 299 VAL SER ASN ASN TYR LYS GLY TYR LEU SER PHE GLU TYR SEQRES 22 A 299 GLU GLY ASP ILE ASN ALA LYS GLU ALA VAL ARG LEU GLY SEQRES 23 A 299 MET MET HIS LEU ARG GLU GLN LEU ASN GLU VAL ILE GLY SEQRES 1 B 299 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 299 LEU VAL PRO ARG GLY SER HIS MET LYS PHE SER LEU MET SEQRES 3 B 299 THR TYR SER MET VAL SER LEU MET ARG SER GLY GLU MET SEQRES 4 B 299 ASN LEU GLU ASP VAL ILE ALA PHE ALA ALA ASN GLU GLY SEQRES 5 B 299 PHE ASP ALA ILE GLU LEU LEU MET VAL ASN PHE SER ARG SEQRES 6 B 299 SER SER ASP GLU ILE ARG ARG MET LEU GLU THR HIS GLN SEQRES 7 B 299 MET LYS ILE SER CYS ILE ASP ALA PHE VAL ASP LEU ALA SEQRES 8 B 299 ALA GLN GLN GLU GLU ASN PHE LEU GLU ASN ILE SER LEU SEQRES 9 B 299 SER GLN ARG ILE ILE ASP GLN ALA VAL GLU LEU SER ALA SEQRES 10 B 299 PRO MET VAL MET LEU VAL PRO GLY PHE PRO ASP LEU ILE SEQRES 11 B 299 ALA SER GLU LYS ASP LYS GLN GLN ALA LEU PRO ARG ILE SEQRES 12 B 299 ILE SER ALA LEU GLN LYS ILE THR PRO TYR ALA GLN SER SEQRES 13 B 299 LYS GLY ILE VAL LEU THR ILE GLU ASN TYR SER ALA LEU SEQRES 14 B 299 GLN MET PRO PHE CYS SER ILE ALA GLU VAL LEU THR ILE SEQRES 15 B 299 LEU GLU GLN VAL PRO GLY LEU ARG LEU THR LEU ASP TYR SEQRES 16 B 299 GLY ASN MET LEU VAL ALA GLY GLU ASP PRO LEU GLU ALA SEQRES 17 B 299 TYR GLU LYS LEU ARG LYS TYR ILE VAL ASN ALA HIS LEU SEQRES 18 B 299 LYS ASP TRP LYS VAL THR SER GLY GLN THR GLY THR ARG SEQRES 19 B 299 CYS ALA ASP GLY ARG HIS LEU GLU PRO SER LEU HIS GLY SEQRES 20 B 299 GLN GLY VAL ILE ASN PHE LYS SER LEU PHE ALA GLU MET SEQRES 21 B 299 VAL SER ASN ASN TYR LYS GLY TYR LEU SER PHE GLU TYR SEQRES 22 B 299 GLU GLY ASP ILE ASN ALA LYS GLU ALA VAL ARG LEU GLY SEQRES 23 B 299 MET MET HIS LEU ARG GLU GLN LEU ASN GLU VAL ILE GLY HET MN A 301 1 HET SO4 A 302 5 HET SO4 A 303 5 HET MN B 301 1 HET SO4 B 302 5 HETNAM MN MANGANESE (II) ION HETNAM SO4 SULFATE ION FORMUL 3 MN 2(MN 2+) FORMUL 4 SO4 3(O4 S 2-) FORMUL 8 HOH *397(H2 O) HELIX 1 AA1 MET A 10 SER A 16 1 7 HELIX 2 AA2 ASN A 20 GLU A 31 1 12 HELIX 3 AA3 SER A 46 GLN A 58 1 13 HELIX 4 AA4 GLN A 74 SER A 96 1 23 HELIX 5 AA5 PHE A 106 ILE A 110 5 5 HELIX 6 AA6 SER A 112 LYS A 137 1 26 HELIX 7 AA7 SER A 155 GLU A 164 1 10 HELIX 8 AA8 TYR A 175 ALA A 181 1 7 HELIX 9 AA9 ASP A 184 ARG A 193 1 10 HELIX 10 AB1 ASN A 232 ASN A 243 1 12 HELIX 11 AB2 ASN A 258 ILE A 278 1 21 HELIX 12 AB3 MET B 10 SER B 16 1 7 HELIX 13 AB4 ASN B 20 GLU B 31 1 12 HELIX 14 AB5 SER B 46 GLN B 58 1 13 HELIX 15 AB6 GLN B 74 LEU B 95 1 22 HELIX 16 AB7 PHE B 106 ILE B 110 5 5 HELIX 17 AB8 SER B 112 LYS B 137 1 26 HELIX 18 AB9 SER B 155 GLU B 164 1 10 HELIX 19 AC1 TYR B 175 ALA B 181 1 7 HELIX 20 AC2 ASP B 184 ARG B 193 1 10 HELIX 21 AC3 ASN B 232 ASN B 243 1 12 HELIX 22 AC4 ASN B 258 ILE B 278 1 21 SHEET 1 AA1 9 LYS A 2 MET A 6 0 SHEET 2 AA1 9 ALA A 35 LEU A 39 1 O GLU A 37 N LEU A 5 SHEET 3 AA1 9 ILE A 61 PHE A 67 1 O ASP A 65 N LEU A 38 SHEET 4 AA1 9 MET A 99 VAL A 103 1 O MET A 101 N ILE A 64 SHEET 5 AA1 9 VAL A 140 GLU A 144 1 O THR A 142 N LEU A 102 SHEET 6 AA1 9 ARG A 170 ASP A 174 1 O THR A 172 N ILE A 143 SHEET 7 AA1 9 ILE A 196 LEU A 201 1 O HIS A 200 N LEU A 173 SHEET 8 AA1 9 TYR A 248 PHE A 251 1 O SER A 250 N LEU A 201 SHEET 9 AA1 9 LYS A 2 MET A 6 1 N SER A 4 O PHE A 251 SHEET 1 AA2 2 ASP A 203 THR A 207 0 SHEET 2 AA2 2 HIS A 220 SER A 224 -1 O GLU A 222 N LYS A 205 SHEET 1 AA3 9 LYS B 2 MET B 6 0 SHEET 2 AA3 9 ALA B 35 LEU B 39 1 O GLU B 37 N LEU B 5 SHEET 3 AA3 9 ILE B 61 PHE B 67 1 O ASP B 65 N LEU B 38 SHEET 4 AA3 9 MET B 99 VAL B 103 1 O MET B 101 N ILE B 64 SHEET 5 AA3 9 VAL B 140 GLU B 144 1 O THR B 142 N LEU B 102 SHEET 6 AA3 9 ARG B 170 ASP B 174 1 O THR B 172 N ILE B 143 SHEET 7 AA3 9 ILE B 196 LEU B 201 1 O HIS B 200 N LEU B 173 SHEET 8 AA3 9 TYR B 248 PHE B 251 1 O SER B 250 N LEU B 201 SHEET 9 AA3 9 LYS B 2 MET B 6 1 N SER B 4 O PHE B 251 SHEET 1 AA4 2 ASP B 203 THR B 207 0 SHEET 2 AA4 2 HIS B 220 SER B 224 -1 O GLU B 222 N LYS B 205 LINK OE1 GLU A 144 MN MN A 301 1555 1555 2.03 LINK OD2 ASP A 174 MN MN A 301 1555 1555 2.16 LINK ND1 HIS A 200 MN MN A 301 1555 1555 2.28 LINK OE1 GLU A 252 MN MN A 301 1555 1555 2.20 LINK MN MN A 301 O HOH A 420 1555 1555 2.28 LINK MN MN A 301 O HOH A 540 1555 1555 2.27 LINK OE1 GLU B 144 MN MN B 301 1555 1555 1.98 LINK OD2 ASP B 174 MN MN B 301 1555 1555 2.15 LINK ND1 HIS B 200 MN MN B 301 1555 1555 2.32 LINK OE1 GLU B 252 MN MN B 301 1555 1555 2.19 LINK MN MN B 301 O HOH B 416 1555 1555 2.24 LINK MN MN B 301 O HOH B 549 1555 1555 2.29 CRYST1 46.460 78.005 150.398 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021524 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012820 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006649 0.00000 CONECT 1125 4377 CONECT 1358 4377 CONECT 1565 4377 CONECT 1976 4377 CONECT 3313 4388 CONECT 3546 4388 CONECT 3753 4388 CONECT 4164 4388 CONECT 4377 1125 1358 1565 1976 CONECT 4377 4413 4533 CONECT 4378 4379 4380 4381 4382 CONECT 4379 4378 CONECT 4380 4378 CONECT 4381 4378 CONECT 4382 4378 CONECT 4383 4384 4385 4386 4387 CONECT 4384 4383 CONECT 4385 4383 CONECT 4386 4383 CONECT 4387 4383 CONECT 4388 3313 3546 3753 4164 CONECT 4388 4604 4737 CONECT 4389 4390 4391 4392 4393 CONECT 4390 4389 CONECT 4391 4389 CONECT 4392 4389 CONECT 4393 4389 CONECT 4413 4377 CONECT 4533 4377 CONECT 4604 4388 CONECT 4737 4388 MASTER 545 0 5 22 22 0 0 6 4788 2 31 46 END