HEADER NUCLEAR PROTEIN 26-NOV-24 9KQO TITLE CRYO-EM STRUCTURE OF RNF20/RNF40-RAD6A-UB IN COMPLEX WITH TITLE 2 H2BS112GLCNAC NUCLEOSOME COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE BRE1B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BRE1-B,95 KDA RETINOBLASTOMA-ASSOCIATED PROTEIN,RBP95,RING COMPND 5 FINGER PROTEIN 40,RING-TYPE E3 UBIQUITIN TRANSFERASE BRE1B; COMPND 6 EC: 2.3.2.27; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: POLYUBIQUITIN-B; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: HISTONE H2A TYPE 1-B/E; COMPND 14 CHAIN: C, G; COMPND 15 SYNONYM: HISTONE H2A.2,HISTONE H2A/A,HISTONE H2A/M; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: HISTONE H2B TYPE 1-K; COMPND 19 CHAIN: D, H; COMPND 20 SYNONYM: H2B K,HIRA-INTERACTING PROTEIN 1; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 5; COMPND 23 MOLECULE: HISTONE H3; COMPND 24 CHAIN: E, K; COMPND 25 ENGINEERED: YES; COMPND 26 MOL_ID: 6; COMPND 27 MOLECULE: HISTONE H4; COMPND 28 CHAIN: F, L; COMPND 29 ENGINEERED: YES; COMPND 30 MOL_ID: 7; COMPND 31 MOLECULE: DNA (147-MER); COMPND 32 CHAIN: I; COMPND 33 ENGINEERED: YES; COMPND 34 MOL_ID: 8; COMPND 35 MOLECULE: DNA (147-MER); COMPND 36 CHAIN: J; COMPND 37 ENGINEERED: YES; COMPND 38 MOL_ID: 9; COMPND 39 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE BRE1A; COMPND 40 CHAIN: M; COMPND 41 SYNONYM: BRE1-A,HBRE1,RING FINGER PROTEIN 20,RING-TYPE E3 UBIQUITIN COMPND 42 TRANSFERASE BRE1A; COMPND 43 EC: 2.3.2.27; COMPND 44 ENGINEERED: YES; COMPND 45 MOL_ID: 10; COMPND 46 MOLECULE: UBIQUITIN-CONJUGATING ENZYME E2 A; COMPND 47 CHAIN: R; COMPND 48 SYNONYM: E2 UBIQUITIN-CONJUGATING ENZYME A,RAD6 HOMOLOG A,HR6A,HHR6A, COMPND 49 UBIQUITIN CARRIER PROTEIN A,UBIQUITIN-PROTEIN LIGASE A; COMPND 50 EC: 2.3.2.23; COMPND 51 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RNF40, BRE1B, KIAA0661; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: UBB; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: H2AC4, H2AFM, HIST1H2AB, H2AC8, H2AFA, HIST1H2AE; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 GENE: H2BC12, H2BFT, HIRIP1, HIST1H2BK; SOURCE 27 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 29 MOL_ID: 5; SOURCE 30 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 31 ORGANISM_COMMON: HUMAN; SOURCE 32 ORGANISM_TAXID: 9606; SOURCE 33 GENE: CALMAC_LOCUS17614; SOURCE 34 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 35 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 36 MOL_ID: 6; SOURCE 37 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 38 ORGANISM_COMMON: HUMAN; SOURCE 39 ORGANISM_TAXID: 9606; SOURCE 40 GENE: H4C1, H4/A, H4FA, HIST1H4A, H4C2, H4/I, H4FI, HIST1H4B, H4C3, SOURCE 41 H4/G, H4FG, HIST1H4C, H4C4, H4/B, H4FB, HIST1H4D, H4C5, H4/J, H4FJ, SOURCE 42 HIST1H4E, H4C6, H4/C, H4FC, HIST1H4F, H4C8, H4/H, H4FH, HIST1H4H, SOURCE 43 H4C9, H4/M, H4FM, HIST1H4I, H4C11, H4/E, H4FE, HIST1H4J, H4C12, SOURCE 44 H4/D, H4FD, HIST1H4K, H4C13, H4/K, H4FK, HIST1H4L, H4C14, H4/N, SOURCE 45 H4F2, H4FN, HIST2H4, HIST2H4A, H4C15, H4/O, H4FO, HIST2H4B, H4C16, SOURCE 46 H4-16, HIST4H4; SOURCE 47 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 48 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 49 MOL_ID: 7; SOURCE 50 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 51 ORGANISM_TAXID: 9606; SOURCE 52 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 53 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 54 MOL_ID: 8; SOURCE 55 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 56 ORGANISM_TAXID: 9606; SOURCE 57 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 58 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 59 MOL_ID: 9; SOURCE 60 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 61 ORGANISM_COMMON: HUMAN; SOURCE 62 ORGANISM_TAXID: 9606; SOURCE 63 GENE: RNF20, BRE1A; SOURCE 64 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 65 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 66 MOL_ID: 10; SOURCE 67 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 68 ORGANISM_COMMON: HUMAN; SOURCE 69 ORGANISM_TAXID: 9606; SOURCE 70 GENE: UBE2A, RAD6A; SOURCE 71 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 72 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RNF20, RNF40, H2BS112GLCNAC, O-GLCNACYLATION, UBIQUITINATION, KEYWDS 2 H2BK120UB, NUCLEAR PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR Z.H.DENG,H.S.AI,L.LIU REVDAT 1 31-DEC-25 9KQO 0 JRNL AUTH Z.H.DENG,S.X.TAO,Y.X.DU,Y.L.LI,L.LIU,H.S.AI JRNL TITL ALLOSTERIC ACTIVATION OF RNF20/RNF40-RAD6A-MEDIATED H2BK120 JRNL TITL 2 MONOUBIQUITYLATION BY H2BS112 GLCNACYLATION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, PHENIX, RELION, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.480 REMARK 3 NUMBER OF PARTICLES : 119602 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9KQO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-NOV-24. REMARK 100 THE DEPOSITION ID IS D_1300054116. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT; POINT; POINT; POINT; REMARK 245 POINT; POINT; POINT; POINT; REMARK 245 POINT; POINT; POINT; POINT; REMARK 245 POINT; POINT; POINT; POINT; REMARK 245 POINT; POINT; POINT; POINT; REMARK 245 POINT; POINT; POINT; POINT; REMARK 245 POINT; POINT; POINT; POINT; REMARK 245 POINT; POINT; POINT; POINT REMARK 245 NAME OF SAMPLE : RNF20/RNF40-RAD6A-UB BOUND TO REMARK 245 H2BS112GLCNAC NUCLEOSOME REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 18000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRADECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J, REMARK 350 AND CHAINS: K, L, M, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER C 1 REMARK 465 GLY C 2 REMARK 465 ARG C 3 REMARK 465 GLY C 4 REMARK 465 LYS C 5 REMARK 465 GLN C 6 REMARK 465 GLY C 7 REMARK 465 GLY C 8 REMARK 465 LYS C 9 REMARK 465 LYS C 119 REMARK 465 THR C 120 REMARK 465 GLU C 121 REMARK 465 SER C 122 REMARK 465 HIS C 123 REMARK 465 HIS C 124 REMARK 465 LYS C 125 REMARK 465 ALA C 126 REMARK 465 LYS C 127 REMARK 465 GLY C 128 REMARK 465 LYS C 129 REMARK 465 PRO D 1 REMARK 465 GLU D 2 REMARK 465 PRO D 3 REMARK 465 ALA D 4 REMARK 465 LYS D 5 REMARK 465 SER D 6 REMARK 465 ALA D 7 REMARK 465 PRO D 8 REMARK 465 ALA D 9 REMARK 465 PRO D 10 REMARK 465 LYS D 11 REMARK 465 LYS D 12 REMARK 465 GLY D 13 REMARK 465 SER D 14 REMARK 465 LYS D 15 REMARK 465 LYS D 16 REMARK 465 ALA D 17 REMARK 465 VAL D 18 REMARK 465 THR D 19 REMARK 465 LYS D 20 REMARK 465 ALA D 21 REMARK 465 GLN D 22 REMARK 465 LYS D 23 REMARK 465 LYS D 24 REMARK 465 ASP D 25 REMARK 465 GLY D 26 REMARK 465 LYS D 27 REMARK 465 LYS D 28 REMARK 465 ARG D 29 REMARK 465 LYS D 30 REMARK 465 LYS D 125 REMARK 465 ALA E 1 REMARK 465 ARG E 2 REMARK 465 THR E 3 REMARK 465 LYS E 4 REMARK 465 GLN E 5 REMARK 465 THR E 6 REMARK 465 ALA E 7 REMARK 465 ARG E 8 REMARK 465 LYS E 9 REMARK 465 SER E 10 REMARK 465 THR E 11 REMARK 465 GLY E 12 REMARK 465 GLY E 13 REMARK 465 LYS E 14 REMARK 465 ALA E 15 REMARK 465 PRO E 16 REMARK 465 ARG E 17 REMARK 465 LYS E 18 REMARK 465 GLN E 19 REMARK 465 LEU E 20 REMARK 465 ALA E 21 REMARK 465 THR E 22 REMARK 465 LYS E 23 REMARK 465 ALA E 24 REMARK 465 ALA E 25 REMARK 465 ARG E 26 REMARK 465 LYS E 27 REMARK 465 SER E 28 REMARK 465 ALA E 29 REMARK 465 PRO E 30 REMARK 465 ALA E 31 REMARK 465 THR E 32 REMARK 465 GLY E 33 REMARK 465 GLY E 34 REMARK 465 VAL E 35 REMARK 465 LYS E 36 REMARK 465 LYS E 37 REMARK 465 ALA E 135 REMARK 465 SER F 1 REMARK 465 GLY F 2 REMARK 465 ARG F 3 REMARK 465 GLY F 4 REMARK 465 LYS F 5 REMARK 465 GLY F 6 REMARK 465 GLY F 7 REMARK 465 LYS F 8 REMARK 465 GLY F 9 REMARK 465 LEU F 10 REMARK 465 GLY F 11 REMARK 465 LYS F 12 REMARK 465 GLY F 13 REMARK 465 GLY F 14 REMARK 465 ALA F 15 REMARK 465 LYS F 16 REMARK 465 ARG F 17 REMARK 465 HIS F 18 REMARK 465 ARG F 19 REMARK 465 LYS F 20 REMARK 465 VAL F 21 REMARK 465 LEU F 22 REMARK 465 GLY F 102 REMARK 465 SER G 1 REMARK 465 GLY G 2 REMARK 465 ARG G 3 REMARK 465 GLY G 4 REMARK 465 LYS G 5 REMARK 465 GLN G 6 REMARK 465 GLY G 7 REMARK 465 GLY G 8 REMARK 465 LYS G 9 REMARK 465 LYS G 119 REMARK 465 THR G 120 REMARK 465 GLU G 121 REMARK 465 SER G 122 REMARK 465 HIS G 123 REMARK 465 HIS G 124 REMARK 465 LYS G 125 REMARK 465 ALA G 126 REMARK 465 LYS G 127 REMARK 465 GLY G 128 REMARK 465 LYS G 129 REMARK 465 PRO H 1 REMARK 465 GLU H 2 REMARK 465 PRO H 3 REMARK 465 ALA H 4 REMARK 465 LYS H 5 REMARK 465 SER H 6 REMARK 465 ALA H 7 REMARK 465 PRO H 8 REMARK 465 ALA H 9 REMARK 465 PRO H 10 REMARK 465 LYS H 11 REMARK 465 LYS H 12 REMARK 465 GLY H 13 REMARK 465 SER H 14 REMARK 465 LYS H 15 REMARK 465 LYS H 16 REMARK 465 ALA H 17 REMARK 465 VAL H 18 REMARK 465 THR H 19 REMARK 465 LYS H 20 REMARK 465 ALA H 21 REMARK 465 GLN H 22 REMARK 465 LYS H 23 REMARK 465 LYS H 24 REMARK 465 ASP H 25 REMARK 465 GLY H 26 REMARK 465 LYS H 27 REMARK 465 LYS H 28 REMARK 465 ARG H 29 REMARK 465 LYS H 30 REMARK 465 LYS H 125 REMARK 465 ALA K 1 REMARK 465 ARG K 2 REMARK 465 THR K 3 REMARK 465 LYS K 4 REMARK 465 GLN K 5 REMARK 465 THR K 6 REMARK 465 ALA K 7 REMARK 465 ARG K 8 REMARK 465 LYS K 9 REMARK 465 SER K 10 REMARK 465 THR K 11 REMARK 465 GLY K 12 REMARK 465 GLY K 13 REMARK 465 LYS K 14 REMARK 465 ALA K 15 REMARK 465 PRO K 16 REMARK 465 ARG K 17 REMARK 465 LYS K 18 REMARK 465 GLN K 19 REMARK 465 LEU K 20 REMARK 465 ALA K 21 REMARK 465 THR K 22 REMARK 465 LYS K 23 REMARK 465 ALA K 24 REMARK 465 ALA K 25 REMARK 465 ARG K 26 REMARK 465 LYS K 27 REMARK 465 SER K 28 REMARK 465 ALA K 29 REMARK 465 PRO K 30 REMARK 465 ALA K 31 REMARK 465 THR K 32 REMARK 465 GLY K 33 REMARK 465 GLY K 34 REMARK 465 VAL K 35 REMARK 465 LYS K 36 REMARK 465 ALA K 135 REMARK 465 SER L 1 REMARK 465 GLY L 2 REMARK 465 ARG L 3 REMARK 465 GLY L 4 REMARK 465 LYS L 5 REMARK 465 GLY L 6 REMARK 465 GLY L 7 REMARK 465 LYS L 8 REMARK 465 GLY L 9 REMARK 465 LEU L 10 REMARK 465 GLY L 11 REMARK 465 LYS L 12 REMARK 465 GLY L 13 REMARK 465 GLY L 14 REMARK 465 ALA L 15 REMARK 465 LYS L 16 REMARK 465 ARG L 17 REMARK 465 HIS L 18 REMARK 465 ARG L 19 REMARK 465 LYS L 20 REMARK 465 VAL L 21 REMARK 465 GLY L 102 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 941 CG CD OE1 OE2 REMARK 470 ASN A 952 CG OD1 ND2 REMARK 470 LYS A 956 CG CD CE NZ REMARK 470 GLU A 977 CG CD OE1 OE2 REMARK 470 ILE A1000 CG1 CG2 CD1 REMARK 470 LYS C 118 CG CD CE NZ REMARK 470 ARG F 23 CG CD NE CZ NH1 NH2 REMARK 470 LYS G 118 CG CD CE NZ REMARK 470 MET R 1 CG SD CE REMARK 470 ARG R 8 CG CD NE CZ NH1 NH2 REMARK 470 LYS R 14 CG CD CE NZ REMARK 470 GLN R 17 CG CD OE1 NE2 REMARK 470 GLU R 18 CG CD OE1 OE2 REMARK 470 ASP R 19 CG OD1 OD2 REMARK 470 GLU R 30 CG CD OE1 OE2 REMARK 470 ASN R 31 CG OD1 ND2 REMARK 470 ASN R 32 CG OD1 ND2 REMARK 470 MET R 34 CG SD CE REMARK 470 PHE R 41 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU R 44 CG CD OE1 OE2 REMARK 470 ASP R 50 CG OD1 OD2 REMARK 470 GLU R 58 CG CD OE1 OE2 REMARK 470 THR R 60 OG1 CG2 REMARK 470 GLU R 61 CG CD OE1 OE2 REMARK 470 TYR R 63 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN R 65 CG OD1 ND2 REMARK 470 ARG R 71 CG CD NE CZ NH1 NH2 REMARK 470 LYS R 75 CG CD CE NZ REMARK 470 ARG R 95 CG CD NE CZ NH1 NH2 REMARK 470 GLN R 110 CG CD OE1 NE2 REMARK 470 LEU R 112 CG CD1 CD2 REMARK 470 ASP R 114 CG OD1 OD2 REMARK 470 GLN R 131 CG CD OE1 NE2 REMARK 470 GLU R 132 CG CD OE1 OE2 REMARK 470 ASN R 133 CG OD1 ND2 REMARK 470 LYS R 134 CG CD CE NZ REMARK 470 ARG R 135 CG CD NE CZ NH1 NH2 REMARK 470 GLU R 136 CG CD OE1 OE2 REMARK 470 LYS R 139 CG CD CE NZ REMARK 470 GLU R 146 CG CD OE1 OE2 REMARK 470 TRP R 149 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP R 149 CZ3 CH2 REMARK 470 ARG R 150 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS M 937 ND1 HIS M 939 1.90 REMARK 500 OG1 THR M 952 OE1 GLN M 954 1.93 REMARK 500 OH TYR C 50 OE1 GLN D 95 1.95 REMARK 500 OG1 THR H 90 OE1 GLU H 93 2.00 REMARK 500 O TYR R 63 N ASN R 65 2.00 REMARK 500 O TYR G 39 OG SER H 78 2.07 REMARK 500 OE1 GLU C 92 NH1 ARG M 953 2.11 REMARK 500 OG SER R 29 O ASN R 32 2.12 REMARK 500 O ASP B 39 ND2 ASN R 117 2.14 REMARK 500 O LYS R 134 OE1 GLU R 138 2.19 REMARK 500 O THR M 921 NZ LYS M 930 2.19 REMARK 500 NE ARG M 928 OE2 GLU M 944 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC I -48 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG I -37 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG I -7 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DC J -57 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DC J 5 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC J 35 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 979 -5.16 74.68 REMARK 500 ASN B 60 60.90 61.41 REMARK 500 ASP M 931 33.20 -140.26 REMARK 500 GLN M 954 65.61 -100.45 REMARK 500 LYS M 956 118.44 -160.48 REMARK 500 ASP R 19 74.92 -152.26 REMARK 500 PRO R 64 31.68 -54.47 REMARK 500 ASN R 65 -13.15 -153.33 REMARK 500 GLN R 93 -34.40 -130.27 REMARK 500 ASN R 119 30.79 -96.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG B 72 LEU B 73 -149.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 948 SG REMARK 620 2 CYS A 968 SG 57.1 REMARK 620 3 CYS A 971 SG 146.2 156.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1102 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 963 SG REMARK 620 2 HIS A 965 NE2 60.6 REMARK 620 3 CYS A 983 SG 177.2 116.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN M1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS M 922 SG REMARK 620 2 CYS M 925 SG 106.1 REMARK 620 3 CYS M 942 SG 109.0 124.2 REMARK 620 4 CYS M 945 SG 121.8 106.3 90.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN M1002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS M 937 SG REMARK 620 2 HIS M 939 ND1 51.1 REMARK 620 3 CYS M 957 SG 110.0 100.0 REMARK 620 4 CYS M 960 SG 110.9 145.3 114.6 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-62509 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF RNF20/RNF40-RAD6A-UB IN COMPLEX WITH REMARK 900 H2BS112GLCNAC NUCLEOSOME DBREF 9KQO A 941 1000 UNP O75150 BRE1B_HUMAN 941 1000 DBREF 9KQO B 1 75 UNP J3QS39 J3QS39_HUMAN 1 75 DBREF 9KQO C 1 129 UNP P04908 H2A1B_HUMAN 2 130 DBREF 9KQO D 1 125 UNP O60814 H2B1K_HUMAN 2 126 DBREF1 9KQO E 1 135 UNP A0A653DHJ5_CALMS DBREF2 9KQO E A0A653DHJ5 2 136 DBREF 9KQO F 1 102 UNP P62805 H4_HUMAN 2 103 DBREF 9KQO G 1 129 UNP P04908 H2A1B_HUMAN 2 130 DBREF 9KQO H 1 125 UNP O60814 H2B1K_HUMAN 2 126 DBREF 9KQO I -73 73 PDB 9KQO 9KQO -73 73 DBREF 9KQO J -73 73 PDB 9KQO 9KQO -73 73 DBREF1 9KQO K 1 135 UNP A0A653DHJ5_CALMS DBREF2 9KQO K A0A653DHJ5 2 136 DBREF 9KQO L 1 102 UNP P62805 H4_HUMAN 2 103 DBREF 9KQO M 915 974 UNP Q5VTR2 BRE1A_HUMAN 915 974 DBREF 9KQO R 1 150 UNP P49459 UBE2A_HUMAN 1 150 SEQADV 9KQO CYS D 120 UNP O60814 LYS 121 CONFLICT SEQADV 9KQO CYS H 120 UNP O60814 LYS 121 CONFLICT SEQRES 1 A 60 GLU TYR LYS ALA ARG LEU THR CYS PRO CYS CYS ASN THR SEQRES 2 A 60 ARG LYS LYS ASP ALA VAL LEU THR LYS CYS PHE HIS VAL SEQRES 3 A 60 PHE CYS PHE GLU CYS VAL ARG GLY ARG TYR GLU ALA ARG SEQRES 4 A 60 GLN ARG LYS CYS PRO LYS CYS ASN ALA ALA PHE GLY ALA SEQRES 5 A 60 HIS ASP PHE HIS ARG ILE TYR ILE SEQRES 1 B 75 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 B 75 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 B 75 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 B 75 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 B 75 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 B 75 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY SEQRES 1 C 129 SER GLY ARG GLY LYS GLN GLY GLY LYS ALA ARG ALA LYS SEQRES 2 C 129 ALA LYS THR ARG SER SER ARG ALA GLY LEU GLN PHE PRO SEQRES 3 C 129 VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN TYR SEQRES 4 C 129 SER GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR LEU ALA SEQRES 5 C 129 ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU LEU SEQRES 6 C 129 ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG ILE SEQRES 7 C 129 ILE PRO ARG HIS LEU GLN LEU ALA ILE ARG ASN ASP GLU SEQRES 8 C 129 GLU LEU ASN LYS LEU LEU GLY ARG VAL THR ILE ALA GLN SEQRES 9 C 129 GLY GLY VAL LEU PRO ASN ILE GLN ALA VAL LEU LEU PRO SEQRES 10 C 129 LYS LYS THR GLU SER HIS HIS LYS ALA LYS GLY LYS SEQRES 1 D 125 PRO GLU PRO ALA LYS SER ALA PRO ALA PRO LYS LYS GLY SEQRES 2 D 125 SER LYS LYS ALA VAL THR LYS ALA GLN LYS LYS ASP GLY SEQRES 3 D 125 LYS LYS ARG LYS ARG SER ARG LYS GLU SER TYR SER VAL SEQRES 4 D 125 TYR VAL TYR LYS VAL LEU LYS GLN VAL HIS PRO ASP THR SEQRES 5 D 125 GLY ILE SER SER LYS ALA MET GLY ILE MET ASN SER PHE SEQRES 6 D 125 VAL ASN ASP ILE PHE GLU ARG ILE ALA GLY GLU ALA SER SEQRES 7 D 125 ARG LEU ALA HIS TYR ASN LYS ARG SER THR ILE THR SER SEQRES 8 D 125 ARG GLU ILE GLN THR ALA VAL ARG LEU LEU LEU PRO GLY SEQRES 9 D 125 GLU LEU ALA LYS HIS ALA VAL SER GLU GLY THR LYS ALA SEQRES 10 D 125 VAL THR CYS TYR THR SER ALA LYS SEQRES 1 E 135 ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY GLY SEQRES 2 E 135 LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA ARG SEQRES 3 E 135 LYS SER ALA PRO ALA THR GLY GLY VAL LYS LYS PRO HIS SEQRES 4 E 135 ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE ARG SEQRES 5 E 135 ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS LEU SEQRES 6 E 135 PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP PHE SEQRES 7 E 135 LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET ALA SEQRES 8 E 135 LEU GLN GLU ALA SER GLU ALA TYR LEU VAL GLY LEU PHE SEQRES 9 E 135 GLU ASP THR ASN LEU SER ALA ILE HIS ALA LYS ARG VAL SEQRES 10 E 135 THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG ILE SEQRES 11 E 135 ARG GLY GLU ARG ALA SEQRES 1 F 102 SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS GLY SEQRES 2 F 102 GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN ILE SEQRES 3 F 102 GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA ARG SEQRES 4 F 102 ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR GLU SEQRES 5 F 102 GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN VAL SEQRES 6 F 102 ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS ARG SEQRES 7 F 102 LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU LYS SEQRES 8 F 102 ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 G 129 SER GLY ARG GLY LYS GLN GLY GLY LYS ALA ARG ALA LYS SEQRES 2 G 129 ALA LYS THR ARG SER SER ARG ALA GLY LEU GLN PHE PRO SEQRES 3 G 129 VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN TYR SEQRES 4 G 129 SER GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR LEU ALA SEQRES 5 G 129 ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU LEU SEQRES 6 G 129 ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG ILE SEQRES 7 G 129 ILE PRO ARG HIS LEU GLN LEU ALA ILE ARG ASN ASP GLU SEQRES 8 G 129 GLU LEU ASN LYS LEU LEU GLY ARG VAL THR ILE ALA GLN SEQRES 9 G 129 GLY GLY VAL LEU PRO ASN ILE GLN ALA VAL LEU LEU PRO SEQRES 10 G 129 LYS LYS THR GLU SER HIS HIS LYS ALA LYS GLY LYS SEQRES 1 H 125 PRO GLU PRO ALA LYS SER ALA PRO ALA PRO LYS LYS GLY SEQRES 2 H 125 SER LYS LYS ALA VAL THR LYS ALA GLN LYS LYS ASP GLY SEQRES 3 H 125 LYS LYS ARG LYS ARG SER ARG LYS GLU SER TYR SER VAL SEQRES 4 H 125 TYR VAL TYR LYS VAL LEU LYS GLN VAL HIS PRO ASP THR SEQRES 5 H 125 GLY ILE SER SER LYS ALA MET GLY ILE MET ASN SER PHE SEQRES 6 H 125 VAL ASN ASP ILE PHE GLU ARG ILE ALA GLY GLU ALA SER SEQRES 7 H 125 ARG LEU ALA HIS TYR ASN LYS ARG SER THR ILE THR SER SEQRES 8 H 125 ARG GLU ILE GLN THR ALA VAL ARG LEU LEU LEU PRO GLY SEQRES 9 H 125 GLU LEU ALA LYS HIS ALA VAL SER GLU GLY THR LYS ALA SEQRES 10 H 125 VAL THR CYS TYR THR SER ALA LYS SEQRES 1 I 147 DA DC DA DG DG DA DT DG DT DA DT DA DT SEQRES 2 I 147 DA DT DC DT DG DA DC DA DC DG DT DG DC SEQRES 3 I 147 DC DT DG DG DA DG DA DC DT DA DG DG DG SEQRES 4 I 147 DA DG DT DA DA DT DC DC DC DC DT DT DG SEQRES 5 I 147 DG DC DG DG DT DT DA DA DA DA DC DG DC SEQRES 6 I 147 DG DG DG DG DG DA DC DA DG DC DG DC DG SEQRES 7 I 147 DT DA DC DG DT DG DC DG DT DT DT DA DA SEQRES 8 I 147 DG DC DG DG DT DG DC DT DA DG DA DG DC SEQRES 9 I 147 DT DG DT DC DT DA DC DG DA DC DC DA DA SEQRES 10 I 147 DT DT DG DA DG DC DG DG DC DC DT DC DG SEQRES 11 I 147 DG DC DA DC DC DG DG DG DA DT DT DC DT SEQRES 12 I 147 DC DC DA DG SEQRES 1 J 147 DC DT DG DG DA DG DA DA DT DC DC DC DG SEQRES 2 J 147 DG DT DG DC DC DG DA DG DG DC DC DG DC SEQRES 3 J 147 DT DC DA DA DT DT DG DG DT DC DG DT DA SEQRES 4 J 147 DG DA DC DA DG DC DT DC DT DA DG DC DA SEQRES 5 J 147 DC DC DG DC DT DT DA DA DA DC DG DC DA SEQRES 6 J 147 DC DG DT DA DC DG DC DG DC DT DG DT DC SEQRES 7 J 147 DC DC DC DC DG DC DG DT DT DT DT DA DA SEQRES 8 J 147 DC DC DG DC DC DA DA DG DG DG DG DA DT SEQRES 9 J 147 DT DA DC DT DC DC DC DT DA DG DT DC DT SEQRES 10 J 147 DC DC DA DG DG DC DA DC DG DT DG DT DC SEQRES 11 J 147 DA DG DA DT DA DT DA DT DA DC DA DT DC SEQRES 12 J 147 DC DT DG DT SEQRES 1 K 135 ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY GLY SEQRES 2 K 135 LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA ARG SEQRES 3 K 135 LYS SER ALA PRO ALA THR GLY GLY VAL LYS LYS PRO HIS SEQRES 4 K 135 ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE ARG SEQRES 5 K 135 ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS LEU SEQRES 6 K 135 PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP PHE SEQRES 7 K 135 LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET ALA SEQRES 8 K 135 LEU GLN GLU ALA SER GLU ALA TYR LEU VAL GLY LEU PHE SEQRES 9 K 135 GLU ASP THR ASN LEU SER ALA ILE HIS ALA LYS ARG VAL SEQRES 10 K 135 THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG ILE SEQRES 11 K 135 ARG GLY GLU ARG ALA SEQRES 1 L 102 SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS GLY SEQRES 2 L 102 GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN ILE SEQRES 3 L 102 GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA ARG SEQRES 4 L 102 ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR GLU SEQRES 5 L 102 GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN VAL SEQRES 6 L 102 ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS ARG SEQRES 7 L 102 LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU LYS SEQRES 8 L 102 ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 M 60 ASP TYR LYS ALA ARG LEU THR CYS PRO CYS CYS ASN MET SEQRES 2 M 60 ARG LYS LYS ASP ALA VAL LEU THR LYS CYS PHE HIS VAL SEQRES 3 M 60 PHE CYS PHE GLU CYS VAL LYS THR ARG TYR ASP THR ARG SEQRES 4 M 60 GLN ARG LYS CYS PRO LYS CYS ASN ALA ALA PHE GLY ALA SEQRES 5 M 60 ASN ASP PHE HIS ARG ILE TYR ILE SEQRES 1 R 150 MET SER THR PRO ALA ARG ARG ARG LEU MET ARG ASP PHE SEQRES 2 R 150 LYS ARG LEU GLN GLU ASP PRO PRO ALA GLY VAL SER GLY SEQRES 3 R 150 ALA PRO SER GLU ASN ASN ILE MET VAL TRP ASN ALA VAL SEQRES 4 R 150 ILE PHE GLY PRO GLU GLY THR PRO PHE GLU ASP GLY THR SEQRES 5 R 150 PHE LYS LEU THR ILE GLU PHE THR GLU GLU TYR PRO ASN SEQRES 6 R 150 LYS PRO PRO THR VAL ARG PHE VAL SER LYS MET PHE HIS SEQRES 7 R 150 PRO ASN VAL TYR ALA ASP GLY SER ILE CYS LEU ASP ILE SEQRES 8 R 150 LEU GLN ASN ARG TRP SER PRO THR TYR ASP VAL SER SER SEQRES 9 R 150 ILE LEU THR SER ILE GLN SER LEU LEU ASP GLU PRO ASN SEQRES 10 R 150 PRO ASN SER PRO ALA ASN SER GLN ALA ALA GLN LEU TYR SEQRES 11 R 150 GLN GLU ASN LYS ARG GLU TYR GLU LYS ARG VAL SER ALA SEQRES 12 R 150 ILE VAL GLU GLN SER TRP ARG HET ZN A1101 1 HET ZN A1102 1 HET NAG D 201 14 HET ZN M1001 1 HET ZN M1002 1 HETNAM ZN ZINC ION HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 15 ZN 4(ZN 2+) FORMUL 17 NAG C8 H15 N O6 HELIX 1 AA1 GLU A 941 THR A 947 1 7 HELIX 2 AA2 PHE A 969 ALA A 978 1 10 HELIX 3 AA3 THR B 22 GLY B 35 1 14 HELIX 4 AA4 PRO B 37 GLN B 41 5 5 HELIX 5 AA5 LEU B 56 ASN B 60 5 5 HELIX 6 AA6 THR C 16 GLY C 22 1 7 HELIX 7 AA7 PRO C 26 GLY C 37 1 12 HELIX 8 AA8 ALA C 45 ASN C 73 1 29 HELIX 9 AA9 ILE C 79 ASN C 89 1 11 HELIX 10 AB1 ASP C 90 LEU C 97 1 8 HELIX 11 AB2 TYR D 37 HIS D 49 1 13 HELIX 12 AB3 SER D 55 ASN D 84 1 30 HELIX 13 AB4 THR D 90 LEU D 102 1 13 HELIX 14 AB5 GLY D 104 ALA D 124 1 21 HELIX 15 AB6 GLY E 44 GLN E 55 1 12 HELIX 16 AB7 ARG E 63 GLN E 76 1 14 HELIX 17 AB8 GLN E 85 ALA E 114 1 30 HELIX 18 AB9 MET E 120 ARG E 131 1 12 HELIX 19 AC1 ASN F 25 ILE F 29 5 5 HELIX 20 AC2 THR F 30 GLY F 42 1 13 HELIX 21 AC3 LEU F 49 ALA F 76 1 28 HELIX 22 AC4 THR F 82 ARG F 92 1 11 HELIX 23 AC5 THR G 16 GLY G 22 1 7 HELIX 24 AC6 PRO G 26 GLY G 37 1 12 HELIX 25 AC7 ALA G 45 LYS G 74 1 30 HELIX 26 AC8 ILE G 79 ASP G 90 1 12 HELIX 27 AC9 ASP G 90 LEU G 97 1 8 HELIX 28 AD1 TYR H 37 HIS H 49 1 13 HELIX 29 AD2 SER H 55 ASN H 84 1 30 HELIX 30 AD3 THR H 90 LEU H 102 1 13 HELIX 31 AD4 PRO H 103 ALA H 124 1 22 HELIX 32 AD5 GLY K 44 GLN K 55 1 12 HELIX 33 AD6 ARG K 63 GLN K 76 1 14 HELIX 34 AD7 GLN K 85 ALA K 114 1 30 HELIX 35 AD8 MET K 120 GLY K 132 1 13 HELIX 36 AD9 ASN L 25 ILE L 29 5 5 HELIX 37 AE1 THR L 30 GLY L 42 1 13 HELIX 38 AE2 LEU L 49 ALA L 76 1 28 HELIX 39 AE3 THR L 82 GLN L 93 1 12 HELIX 40 AE4 TYR M 916 LEU M 920 1 5 HELIX 41 AE5 CYS M 942 THR M 952 1 11 HELIX 42 AE6 THR R 3 ASP R 19 1 17 HELIX 43 AE7 LEU R 89 ASN R 94 1 6 HELIX 44 AE8 ASP R 101 GLU R 115 1 15 HELIX 45 AE9 ASN R 123 GLU R 132 1 10 HELIX 46 AF1 ASN R 133 TRP R 149 1 17 SHEET 1 AA1 3 VAL A 966 PHE A 967 0 SHEET 2 AA1 3 ALA A 958 LEU A 960 -1 N ALA A 958 O PHE A 967 SHEET 3 AA1 3 PHE A 995 ARG A 997 -1 O HIS A 996 N VAL A 959 SHEET 1 AA2 5 THR B 12 GLU B 16 0 SHEET 2 AA2 5 GLN B 2 LYS B 6 -1 N VAL B 5 O ILE B 13 SHEET 3 AA2 5 THR B 66 VAL B 70 1 O LEU B 67 N LYS B 6 SHEET 4 AA2 5 ARG B 42 PHE B 45 -1 N ILE B 44 O HIS B 68 SHEET 5 AA2 5 LYS B 48 GLN B 49 -1 O LYS B 48 N PHE B 45 SHEET 1 AA3 2 ARG C 42 VAL C 43 0 SHEET 2 AA3 2 THR D 88 ILE D 89 1 O ILE D 89 N ARG C 42 SHEET 1 AA4 2 ARG C 77 ILE C 78 0 SHEET 2 AA4 2 GLY D 53 ILE D 54 1 O GLY D 53 N ILE C 78 SHEET 1 AA5 2 VAL C 100 ILE C 102 0 SHEET 2 AA5 2 THR F 96 TYR F 98 1 O TYR F 98 N THR C 101 SHEET 1 AA6 2 ARG E 83 PHE E 84 0 SHEET 2 AA6 2 THR F 80 VAL F 81 1 O VAL F 81 N ARG E 83 SHEET 1 AA7 2 THR E 118 ILE E 119 0 SHEET 2 AA7 2 ARG F 45 ILE F 46 1 O ARG F 45 N ILE E 119 SHEET 1 AA8 2 ARG G 42 VAL G 43 0 SHEET 2 AA8 2 THR H 88 ILE H 89 1 O ILE H 89 N ARG G 42 SHEET 1 AA9 2 ARG G 77 ILE G 78 0 SHEET 2 AA9 2 GLY H 53 ILE H 54 1 O GLY H 53 N ILE G 78 SHEET 1 AB1 2 THR G 101 ILE G 102 0 SHEET 2 AB1 2 LEU L 97 TYR L 98 1 O TYR L 98 N THR G 101 SHEET 1 AB2 2 THR K 118 ILE K 119 0 SHEET 2 AB2 2 ARG L 45 ILE L 46 1 O ARG L 45 N ILE K 119 SHEET 1 AB3 3 HIS M 939 PHE M 941 0 SHEET 2 AB3 3 ALA M 932 LEU M 934 -1 N LEU M 934 O HIS M 939 SHEET 3 AB3 3 PHE M 969 ARG M 971 -1 O HIS M 970 N VAL M 933 SHEET 1 AB4 4 VAL R 24 PRO R 28 0 SHEET 2 AB4 4 TRP R 36 PHE R 41 -1 O ASN R 37 N ALA R 27 SHEET 3 AB4 4 THR R 52 GLU R 58 -1 O LEU R 55 N ALA R 38 SHEET 4 AB4 4 THR R 69 PHE R 72 -1 O ARG R 71 N THR R 56 LINK OG SER D 112 C1 NAG D 201 1555 1555 1.40 LINK SG CYS A 948 ZN ZN A1101 1555 1555 2.31 LINK SG CYS A 963 ZN ZN A1102 1555 1555 2.30 LINK NE2 HIS A 965 ZN ZN A1102 1555 1555 2.30 LINK SG CYS A 968 ZN ZN A1101 1555 1555 2.32 LINK SG CYS A 971 ZN ZN A1101 1555 1555 2.32 LINK SG CYS A 983 ZN ZN A1102 1555 1555 2.30 LINK SG CYS M 922 ZN ZN M1001 1555 1555 2.33 LINK SG CYS M 925 ZN ZN M1001 1555 1555 2.33 LINK SG CYS M 937 ZN ZN M1002 1555 1555 2.31 LINK ND1 HIS M 939 ZN ZN M1002 1555 1555 2.06 LINK SG CYS M 942 ZN ZN M1001 1555 1555 2.33 LINK SG CYS M 945 ZN ZN M1001 1555 1555 2.32 LINK SG CYS M 957 ZN ZN M1002 1555 1555 2.32 LINK SG CYS M 960 ZN ZN M1002 1555 1555 2.32 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 477 ILE A1000 TER 1075 GLY B 75 TER 1912 LYS C 118 TER 2645 ALA D 124 TER 3447 ARG E 134 TER 4075 GLY F 101 TER 4912 LYS G 118 TER 5645 ALA H 124 TER 8677 DG I 73 TER 11674 DT J 73 TER 12485 ARG K 134 TER 13127 GLY L 101 TER 13622 ILE M 974 TER 14683 ARG R 150 HETATM14684 ZN ZN A1101 121.065 117.665 91.657 1.00378.76 ZN HETATM14685 ZN ZN A1102 119.203 114.459 104.608 1.00366.44 ZN HETATM14686 C1 NAG D 201 146.137 145.684 117.836 1.00238.87 C ANISOU14686 C1 NAG D 201 30917 29334 30510 476 -117 810 C HETATM14687 C2 NAG D 201 146.360 145.121 116.426 1.00238.53 C ANISOU14687 C2 NAG D 201 30845 29299 30487 446 -128 817 C HETATM14688 C3 NAG D 201 147.558 144.171 116.397 1.00233.62 C ANISOU14688 C3 NAG D 201 30236 28675 29853 432 -120 809 C HETATM14689 C4 NAG D 201 148.780 144.837 117.012 1.00235.12 C ANISOU14689 C4 NAG D 201 30466 28835 30033 432 -99 793 C HETATM14690 C5 NAG D 201 148.447 145.324 118.413 1.00235.17 C ANISOU14690 C5 NAG D 201 30502 28832 30019 464 -89 788 C HETATM14691 C6 NAG D 201 149.596 146.042 119.081 1.00238.57 C ANISOU14691 C6 NAG D 201 30978 29231 30438 465 -67 772 C HETATM14692 C7 NAG D 201 144.224 145.034 115.218 1.00239.25 C ANISOU14692 C7 NAG D 201 30874 29427 30602 424 -158 841 C HETATM14693 C8 NAG D 201 144.562 146.402 114.715 1.00239.57 C ANISOU14693 C8 NAG D 201 30887 29495 30642 425 -172 854 C HETATM14694 N2 NAG D 201 145.162 144.438 115.955 1.00238.07 N ANISOU14694 N2 NAG D 201 30753 29269 30433 445 -145 831 N HETATM14695 O3 NAG D 201 147.837 143.827 115.044 1.00233.00 O ANISOU14695 O3 NAG D 201 30132 28603 29793 405 -130 814 O HETATM14696 O4 NAG D 201 149.863 143.918 117.078 1.00235.48 O ANISOU14696 O4 NAG D 201 30524 28881 30065 419 -89 784 O HETATM14697 O5 NAG D 201 147.363 146.257 118.331 1.00237.73 O ANISOU14697 O5 NAG D 201 30811 29159 30357 476 -98 796 O HETATM14698 O6 NAG D 201 150.737 146.080 118.233 1.00241.40 O ANISOU14698 O6 NAG D 201 31338 29576 30806 433 -60 763 O HETATM14699 O7 NAG D 201 143.151 144.497 114.967 1.00240.68 O ANISOU14699 O7 NAG D 201 31054 29596 30799 405 -157 838 O HETATM14700 ZN ZN M1001 141.164 126.818 106.039 1.00247.47 ZN HETATM14701 ZN ZN M1002 131.014 135.659 103.342 1.00243.08 ZN CONECT 6314684 CONECT 16914685 CONECT 19014685 CONECT 21414684 CONECT 24014684 CONECT 34114685 CONECT 256014686 CONECT1319314700 CONECT1321214700 CONECT1330714701 CONECT1332514701 CONECT1335214700 CONECT1337814700 CONECT1348514701 CONECT1350714701 CONECT14684 63 214 240 CONECT14685 169 190 341 CONECT14686 25601468714697 CONECT14687146861468814694 CONECT14688146871468914695 CONECT14689146881469014696 CONECT14690146891469114697 CONECT146911469014698 CONECT14692146931469414699 CONECT1469314692 CONECT146941468714692 CONECT1469514688 CONECT1469614689 CONECT146971468614690 CONECT1469814691 CONECT1469914692 CONECT1470013193132121335213378 CONECT1470113307133251348513507 MASTER 506 0 5 46 33 0 0 614687 14 33 130 END