data_9KTJ # _entry.id 9KTJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9KTJ pdb_00009ktj 10.2210/pdb9ktj/pdb WWPDB D_1300051244 ? ? BMRB 36716 ? 10.13018/BMR36716 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-08-06 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 9KTJ _pdbx_database_status.recvd_initial_deposition_date 2024-12-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs . _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution NMR structures of ATP-binding DNA aptamer in complex with ATP' _pdbx_database_related.db_id 36716 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email guopei@ibmc.ac.cn _pdbx_contact_author.name_first Pei _pdbx_contact_author.name_last Guo _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7760-5786 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jiang, Y.' 1 0009-0002-3957-731X 'Wan, L.' 2 0000-0003-3663-2678 'Guo, P.' 3 0000-0001-7760-5786 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Solution NMR structures of ATP-binding DNA aptamer in complex with ATP' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jiang, Y.' 1 ? primary 'Guo, P.' 2 ? primary 'Wan, L.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'DNA (34-MER)' 10588.812 1 ? ? ? ? 2 non-polymer syn "ADENOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DC)(DG)(DA)(DC)(DG)(DT)(DT)(DT)(DG)(DC)(DG)(DA)(DT)(DG)(DA)(DG)(DA)(DA)(DC)(DG) (DA)(DA)(DG)(DT)(DT)(DC)(DG)(DA)(DA)(DG)(DG)(DT)(DC)(DG) ; _entity_poly.pdbx_seq_one_letter_code_can CGACGTTTGCGATGAGAACGAAGTTCGAAGGTCG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name "ADENOSINE-5'-TRIPHOSPHATE" _pdbx_entity_nonpoly.comp_id ATP # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DA n 1 4 DC n 1 5 DG n 1 6 DT n 1 7 DT n 1 8 DT n 1 9 DG n 1 10 DC n 1 11 DG n 1 12 DA n 1 13 DT n 1 14 DG n 1 15 DA n 1 16 DG n 1 17 DA n 1 18 DA n 1 19 DC n 1 20 DG n 1 21 DA n 1 22 DA n 1 23 DG n 1 24 DT n 1 25 DT n 1 26 DC n 1 27 DG n 1 28 DA n 1 29 DA n 1 30 DG n 1 31 DG n 1 32 DT n 1 33 DC n 1 34 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 34 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ATP non-polymer . "ADENOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DA 3 3 3 DA DA A . n A 1 4 DC 4 4 4 DC DC A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DC 10 10 10 DC DC A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DA 12 12 12 DA DA A . n A 1 13 DT 13 13 13 DT DT A . n A 1 14 DG 14 14 14 DG DG A . n A 1 15 DA 15 15 15 DA DA A . n A 1 16 DG 16 16 16 DG DG A . n A 1 17 DA 17 17 17 DA DA A . n A 1 18 DA 18 18 18 DA DA A . n A 1 19 DC 19 19 19 DC DC A . n A 1 20 DG 20 20 20 DG DG A . n A 1 21 DA 21 21 21 DA DA A . n A 1 22 DA 22 22 22 DA DA A . n A 1 23 DG 23 23 23 DG DG A . n A 1 24 DT 24 24 24 DT DT A . n A 1 25 DT 25 25 25 DT DT A . n A 1 26 DC 26 26 26 DC DC A . n A 1 27 DG 27 27 27 DG DG A . n A 1 28 DA 28 28 28 DA DA A . n A 1 29 DA 29 29 29 DA DA A . n A 1 30 DG 30 30 30 DG DG A . n A 1 31 DG 31 31 31 DG DG A . n A 1 32 DT 32 32 32 DT DT A . n A 1 33 DC 33 33 33 DC DC A . n A 1 34 DG 34 34 34 DG DG A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ATP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ATP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id ATP _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 35 _pdbx_nonpoly_scheme.pdb_mon_id ATP _pdbx_nonpoly_scheme.auth_mon_id ATP _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9KTJ _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 9KTJ _struct.title 'Solution NMR structures of ATP-binding DNA aptamer in complex with ATP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9KTJ _struct_keywords.text 'DNA aptamer, ATP, three-way junction, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9KTJ _struct_ref.pdbx_db_accession 9KTJ _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9KTJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 34 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 9KTJ _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 34 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 34 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 34 N1 ? ? A DC 1 A DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 34 O6 ? ? A DC 1 A DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 34 N2 ? ? A DC 1 A DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 33 N3 ? ? A DG 2 A DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 33 O2 ? ? A DG 2 A DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DC 33 N4 ? ? A DG 2 A DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 A DT 32 N3 ? ? A DA 3 A DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A DT 32 O4 ? ? A DA 3 A DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N3 ? ? ? 1_555 A DG 31 N1 ? ? A DC 4 A DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 N4 ? ? ? 1_555 A DG 31 O6 ? ? A DC 4 A DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 4 O2 ? ? ? 1_555 A DG 31 N2 ? ? A DC 4 A DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 7 N3 ? ? ? 1_555 A DA 29 N1 ? ? A DT 7 A DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 7 O4 ? ? ? 1_555 A DA 29 N6 ? ? A DT 7 A DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 8 N3 ? ? ? 1_555 A DA 28 N1 ? ? A DT 8 A DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 8 O4 ? ? ? 1_555 A DA 28 N6 ? ? A DT 8 A DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DT 13 O4 ? ? A DG 9 A DT 13 1_555 ? ? ? ? ? ? 'DG-DT MISPAIR' ? ? ? hydrog17 hydrog ? ? A DG 11 N2 ? ? ? 1_555 A DT 13 O2 ? ? A DG 11 A DT 13 1_555 ? ? ? ? ? ? 'DG-DT MISPAIR' ? ? ? hydrog18 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DC 26 N3 ? ? A DG 16 A DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DC 26 O2 ? ? A DG 16 A DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 16 O6 ? ? ? 1_555 A DC 26 N4 ? ? A DG 16 A DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 17 N1 ? ? ? 1_555 A DT 25 N3 ? ? A DA 17 A DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 17 N6 ? ? ? 1_555 A DT 25 O4 ? ? A DA 17 A DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 18 N1 ? ? ? 1_555 A DT 24 N3 ? ? A DA 18 A DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 18 N6 ? ? ? 1_555 A DT 24 O4 ? ? A DA 18 A DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 19 N3 ? ? ? 1_555 A DG 23 N1 ? ? A DC 19 A DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 19 N4 ? ? ? 1_555 A DG 23 O6 ? ? A DC 19 A DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 19 O2 ? ? ? 1_555 A DG 23 N2 ? ? A DC 19 A DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 20 N2 ? ? ? 1_555 A DA 22 N7 ? ? A DG 20 A DA 22 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog29 hydrog ? ? A DG 20 N3 ? ? ? 1_555 A DA 22 N6 ? ? A DG 20 A DA 22 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 9KTJ _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.10 108.30 3.80 0.30 N 2 1 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.85 108.30 4.55 0.30 N 3 1 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 114.19 108.30 5.89 0.30 N 4 1 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 113.23 108.30 4.93 0.30 N 5 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.56 108.30 4.26 0.30 N 6 1 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 115.98 108.30 7.68 0.30 N 7 1 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.45 108.30 2.15 0.30 N 8 1 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 111.95 108.30 3.65 0.30 N 9 1 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 112.32 108.30 4.02 0.30 N 10 1 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.89 108.30 2.59 0.30 N 11 1 "O4'" A DA 17 ? ? "C1'" A DA 17 ? ? N9 A DA 17 ? ? 111.51 108.30 3.21 0.30 N 12 1 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.66 108.30 2.36 0.30 N 13 1 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 112.56 108.30 4.26 0.30 N 14 1 "O4'" A DA 21 ? ? "C1'" A DA 21 ? ? N9 A DA 21 ? ? 110.44 108.30 2.14 0.30 N 15 1 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 111.27 108.30 2.97 0.30 N 16 1 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 114.28 108.30 5.98 0.30 N 17 1 "O4'" A DT 24 ? ? "C1'" A DT 24 ? ? N1 A DT 24 ? ? 112.07 108.30 3.77 0.30 N 18 1 "O4'" A DG 27 ? ? "C1'" A DG 27 ? ? N9 A DG 27 ? ? 112.90 108.30 4.60 0.30 N 19 1 "O4'" A DA 28 ? ? "C1'" A DA 28 ? ? N9 A DA 28 ? ? 110.91 108.30 2.61 0.30 N 20 1 "O4'" A DG 31 ? ? "C1'" A DG 31 ? ? N9 A DG 31 ? ? 112.36 108.30 4.06 0.30 N 21 1 "O4'" A DC 33 ? ? "C1'" A DC 33 ? ? N1 A DC 33 ? ? 112.43 108.30 4.13 0.30 N 22 1 "O4'" A DG 34 ? ? "C1'" A DG 34 ? ? N9 A DG 34 ? ? 111.02 108.30 2.72 0.30 N 23 2 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.40 108.30 4.10 0.30 N 24 2 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 111.74 108.30 3.44 0.30 N 25 2 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 112.10 108.30 3.80 0.30 N 26 2 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.13 108.30 1.83 0.30 N 27 2 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 113.61 108.30 5.31 0.30 N 28 2 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.68 108.30 3.38 0.30 N 29 2 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 116.75 108.30 8.45 0.30 N 30 2 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 110.25 108.30 1.95 0.30 N 31 2 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.98 108.30 3.68 0.30 N 32 2 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.52 108.30 3.22 0.30 N 33 2 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.57 108.30 2.27 0.30 N 34 2 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 110.64 108.30 2.34 0.30 N 35 2 "O4'" A DA 21 ? ? "C1'" A DA 21 ? ? N9 A DA 21 ? ? 111.59 108.30 3.29 0.30 N 36 2 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 110.75 108.30 2.45 0.30 N 37 2 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 114.40 108.30 6.10 0.30 N 38 2 "O4'" A DT 24 ? ? "C1'" A DT 24 ? ? N1 A DT 24 ? ? 111.14 108.30 2.84 0.30 N 39 2 "O4'" A DC 26 ? ? "C1'" A DC 26 ? ? N1 A DC 26 ? ? 110.24 108.30 1.94 0.30 N 40 2 "O4'" A DG 27 ? ? "C1'" A DG 27 ? ? N9 A DG 27 ? ? 112.89 108.30 4.59 0.30 N 41 2 "O4'" A DA 28 ? ? "C1'" A DA 28 ? ? N9 A DA 28 ? ? 112.03 108.30 3.73 0.30 N 42 2 "O4'" A DG 31 ? ? "C1'" A DG 31 ? ? N9 A DG 31 ? ? 110.74 108.30 2.44 0.30 N 43 2 "O4'" A DC 33 ? ? "C1'" A DC 33 ? ? "C2'" A DC 33 ? ? 100.78 105.90 -5.12 0.80 N 44 2 "O4'" A DC 33 ? ? "C1'" A DC 33 ? ? N1 A DC 33 ? ? 113.16 108.30 4.86 0.30 N 45 2 "O4'" A DG 34 ? ? "C1'" A DG 34 ? ? N9 A DG 34 ? ? 110.97 108.30 2.67 0.30 N 46 3 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.40 108.30 2.10 0.30 N 47 3 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 115.58 108.30 7.28 0.30 N 48 3 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.14 108.30 3.84 0.30 N 49 3 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 113.86 108.30 5.56 0.30 N 50 3 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 113.79 108.30 5.49 0.30 N 51 3 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.26 108.30 3.96 0.30 N 52 3 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 115.17 108.30 6.87 0.30 N 53 3 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 110.73 108.30 2.43 0.30 N 54 3 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 113.20 108.30 4.90 0.30 N 55 3 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.71 108.30 3.41 0.30 N 56 3 "O4'" A DA 17 ? ? "C1'" A DA 17 ? ? N9 A DA 17 ? ? 111.92 108.30 3.62 0.30 N 57 3 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 112.16 108.30 3.86 0.30 N 58 3 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 113.02 108.30 4.72 0.30 N 59 3 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? "C2'" A DA 22 ? ? 100.96 105.90 -4.94 0.80 N 60 3 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 111.53 108.30 3.23 0.30 N 61 3 "C1'" A DG 23 ? ? "O4'" A DG 23 ? ? "C4'" A DG 23 ? ? 104.09 110.10 -6.01 1.00 N 62 3 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 114.36 108.30 6.06 0.30 N 63 3 "O4'" A DT 24 ? ? "C1'" A DT 24 ? ? N1 A DT 24 ? ? 112.80 108.30 4.50 0.30 N 64 3 "O4'" A DT 25 ? ? "C1'" A DT 25 ? ? N1 A DT 25 ? ? 110.24 108.30 1.94 0.30 N 65 3 "O4'" A DC 26 ? ? "C1'" A DC 26 ? ? N1 A DC 26 ? ? 110.59 108.30 2.29 0.30 N 66 3 "O4'" A DG 27 ? ? "C1'" A DG 27 ? ? N9 A DG 27 ? ? 113.85 108.30 5.55 0.30 N 67 3 "O4'" A DA 29 ? ? "C1'" A DA 29 ? ? N9 A DA 29 ? ? 110.24 108.30 1.94 0.30 N 68 3 "O4'" A DG 31 ? ? "C1'" A DG 31 ? ? N9 A DG 31 ? ? 110.94 108.30 2.64 0.30 N 69 3 "O4'" A DC 33 ? ? "C1'" A DC 33 ? ? "C2'" A DC 33 ? ? 100.43 105.90 -5.47 0.80 N 70 3 "O4'" A DC 33 ? ? "C1'" A DC 33 ? ? N1 A DC 33 ? ? 113.10 108.30 4.80 0.30 N 71 3 "O4'" A DG 34 ? ? "C1'" A DG 34 ? ? N9 A DG 34 ? ? 111.17 108.30 2.87 0.30 N 72 4 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 110.83 108.30 2.53 0.30 N 73 4 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 110.89 108.30 2.59 0.30 N 74 4 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 111.75 108.30 3.45 0.30 N 75 4 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? "C2'" A DG 5 ? ? 100.91 105.90 -4.99 0.80 N 76 4 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 113.38 108.30 5.08 0.30 N 77 4 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 114.18 108.30 5.88 0.30 N 78 4 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.80 108.30 2.50 0.30 N 79 4 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 115.68 108.30 7.38 0.30 N 80 4 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 110.14 108.30 1.84 0.30 N 81 4 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.29 108.30 2.99 0.30 N 82 4 C8 A DG 16 ? ? N9 A DG 16 ? ? C4 A DG 16 ? ? 103.98 106.40 -2.42 0.40 N 83 4 "O4'" A DA 17 ? ? "C1'" A DA 17 ? ? N9 A DA 17 ? ? 112.54 108.30 4.24 0.30 N 84 4 "C4'" A DA 18 ? ? "C3'" A DA 18 ? ? "C2'" A DA 18 ? ? 96.90 102.20 -5.30 0.70 N 85 4 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 113.99 108.30 5.69 0.30 N 86 4 "C3'" A DG 20 ? ? "C2'" A DG 20 ? ? "C1'" A DG 20 ? ? 97.45 102.40 -4.95 0.80 N 87 4 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 112.60 108.30 4.30 0.30 N 88 4 "O4'" A DA 21 ? ? "C1'" A DA 21 ? ? N9 A DA 21 ? ? 111.37 108.30 3.07 0.30 N 89 4 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 111.85 108.30 3.55 0.30 N 90 4 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 110.21 108.30 1.91 0.30 N 91 4 "O4'" A DT 24 ? ? "C1'" A DT 24 ? ? N1 A DT 24 ? ? 111.23 108.30 2.93 0.30 N 92 4 "O4'" A DT 25 ? ? "C1'" A DT 25 ? ? N1 A DT 25 ? ? 111.85 108.30 3.55 0.30 N 93 4 "O4'" A DG 27 ? ? "C1'" A DG 27 ? ? N9 A DG 27 ? ? 114.18 108.30 5.88 0.30 N 94 4 "O4'" A DA 29 ? ? "C1'" A DA 29 ? ? N9 A DA 29 ? ? 110.16 108.30 1.86 0.30 N 95 4 "O4'" A DG 31 ? ? "C1'" A DG 31 ? ? N9 A DG 31 ? ? 110.29 108.30 1.99 0.30 N 96 4 "O4'" A DC 33 ? ? "C1'" A DC 33 ? ? "C2'" A DC 33 ? ? 100.78 105.90 -5.12 0.80 N 97 4 "O4'" A DC 33 ? ? "C1'" A DC 33 ? ? N1 A DC 33 ? ? 113.73 108.30 5.43 0.30 N 98 4 "O4'" A DG 34 ? ? "C1'" A DG 34 ? ? N9 A DG 34 ? ? 110.36 108.30 2.06 0.30 N 99 5 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.02 108.30 4.72 0.30 N 100 5 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.19 108.30 3.89 0.30 N 101 5 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.40 108.30 2.10 0.30 N 102 5 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.88 108.30 2.58 0.30 N 103 5 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.05 108.30 2.75 0.30 N 104 5 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 116.32 108.30 8.02 0.30 N 105 5 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 110.54 108.30 2.24 0.30 N 106 5 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.62 108.30 3.32 0.30 N 107 5 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.82 108.30 3.52 0.30 N 108 5 "C3'" A DA 15 ? ? "C2'" A DA 15 ? ? "C1'" A DA 15 ? ? 97.06 102.40 -5.34 0.80 N 109 5 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.44 108.30 3.14 0.30 N 110 5 "O4'" A DA 17 ? ? "C1'" A DA 17 ? ? N9 A DA 17 ? ? 114.85 108.30 6.55 0.30 N 111 5 "O4'" A DA 18 ? ? "C1'" A DA 18 ? ? N9 A DA 18 ? ? 110.18 108.30 1.88 0.30 N 112 5 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 112.31 108.30 4.01 0.30 N 113 5 "O4'" A DA 21 ? ? "C1'" A DA 21 ? ? N9 A DA 21 ? ? 110.78 108.30 2.48 0.30 N 114 5 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 111.07 108.30 2.77 0.30 N 115 5 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.13 108.30 3.83 0.30 N 116 5 "O4'" A DG 27 ? ? "C1'" A DG 27 ? ? N9 A DG 27 ? ? 111.09 108.30 2.79 0.30 N 117 5 "O4'" A DA 28 ? ? "C1'" A DA 28 ? ? N9 A DA 28 ? ? 110.50 108.30 2.20 0.30 N 118 5 "O4'" A DA 29 ? ? "C1'" A DA 29 ? ? N9 A DA 29 ? ? 111.03 108.30 2.73 0.30 N 119 5 "O4'" A DG 34 ? ? "C1'" A DG 34 ? ? N9 A DG 34 ? ? 112.90 108.30 4.60 0.30 N 120 6 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 115.74 108.30 7.44 0.30 N 121 6 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 111.90 108.30 3.60 0.30 N 122 6 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 112.39 108.30 4.09 0.30 N 123 6 "C3'" A DT 7 ? ? "C2'" A DT 7 ? ? "C1'" A DT 7 ? ? 97.36 102.40 -5.04 0.80 N 124 6 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.23 108.30 1.93 0.30 N 125 6 "C1'" A DT 8 ? ? "O4'" A DT 8 ? ? "C4'" A DT 8 ? ? 104.08 110.10 -6.02 1.00 N 126 6 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 114.43 108.30 6.13 0.30 N 127 6 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.59 108.30 4.29 0.30 N 128 6 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 115.40 108.30 7.10 0.30 N 129 6 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 110.91 108.30 2.61 0.30 N 130 6 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.58 108.30 2.28 0.30 N 131 6 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.59 108.30 3.29 0.30 N 132 6 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 110.64 108.30 2.34 0.30 N 133 6 C8 A DG 16 ? ? N9 A DG 16 ? ? C4 A DG 16 ? ? 103.93 106.40 -2.47 0.40 N 134 6 "O4'" A DA 17 ? ? "C1'" A DA 17 ? ? N9 A DA 17 ? ? 112.23 108.30 3.93 0.30 N 135 6 "O4'" A DA 18 ? ? "C1'" A DA 18 ? ? N9 A DA 18 ? ? 113.45 108.30 5.15 0.30 N 136 6 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 112.45 108.30 4.15 0.30 N 137 6 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 112.02 108.30 3.72 0.30 N 138 6 "O4'" A DA 21 ? ? "C1'" A DA 21 ? ? N9 A DA 21 ? ? 110.85 108.30 2.55 0.30 N 139 6 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 110.61 108.30 2.31 0.30 N 140 6 "O4'" A DG 27 ? ? "C1'" A DG 27 ? ? "C2'" A DG 27 ? ? 101.01 105.90 -4.89 0.80 N 141 6 "O4'" A DG 27 ? ? "C1'" A DG 27 ? ? N9 A DG 27 ? ? 113.73 108.30 5.43 0.30 N 142 6 "O4'" A DA 29 ? ? "C1'" A DA 29 ? ? N9 A DA 29 ? ? 111.77 108.30 3.47 0.30 N 143 6 "O4'" A DG 31 ? ? "C1'" A DG 31 ? ? N9 A DG 31 ? ? 111.76 108.30 3.46 0.30 N 144 6 "O4'" A DC 33 ? ? "C1'" A DC 33 ? ? N1 A DC 33 ? ? 110.43 108.30 2.13 0.30 N 145 6 "O4'" A DG 34 ? ? "C1'" A DG 34 ? ? N9 A DG 34 ? ? 110.40 108.30 2.10 0.30 N 146 7 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.30 108.30 2.00 0.30 N 147 7 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 116.93 108.30 8.63 0.30 N 148 7 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 110.17 108.30 1.87 0.30 N 149 7 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.21 108.30 3.91 0.30 N 150 7 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.99 108.30 2.69 0.30 N 151 7 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 114.11 108.30 5.81 0.30 N 152 7 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.55 108.30 2.25 0.30 N 153 7 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 115.94 108.30 7.64 0.30 N 154 7 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 111.80 108.30 3.50 0.30 N 155 7 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.98 108.30 3.68 0.30 N 156 7 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 110.21 108.30 1.91 0.30 N 157 7 "O4'" A DA 17 ? ? "C1'" A DA 17 ? ? N9 A DA 17 ? ? 112.70 108.30 4.40 0.30 N 158 7 "O4'" A DA 18 ? ? "C1'" A DA 18 ? ? N9 A DA 18 ? ? 110.89 108.30 2.59 0.30 N 159 7 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 111.47 108.30 3.17 0.30 N 160 7 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 110.57 108.30 2.27 0.30 N 161 7 "O4'" A DC 26 ? ? "C1'" A DC 26 ? ? N1 A DC 26 ? ? 110.11 108.30 1.81 0.30 N 162 7 N3 A DC 26 ? ? C2 A DC 26 ? ? O2 A DC 26 ? ? 117.45 121.90 -4.45 0.70 N 163 7 "O4'" A DG 27 ? ? "C1'" A DG 27 ? ? N9 A DG 27 ? ? 111.06 108.30 2.76 0.30 N 164 7 "O4'" A DA 29 ? ? "C1'" A DA 29 ? ? N9 A DA 29 ? ? 111.77 108.30 3.47 0.30 N 165 7 "O4'" A DG 31 ? ? "C1'" A DG 31 ? ? N9 A DG 31 ? ? 111.73 108.30 3.43 0.30 N 166 8 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 115.01 108.30 6.71 0.30 N 167 8 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.15 108.30 1.85 0.30 N 168 8 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.11 108.30 2.81 0.30 N 169 8 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.95 108.30 3.65 0.30 N 170 8 "C1'" A DT 8 ? ? "O4'" A DT 8 ? ? "C4'" A DT 8 ? ? 104.07 110.10 -6.03 1.00 N 171 8 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 114.24 108.30 5.94 0.30 N 172 8 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.25 122.90 -3.65 0.60 N 173 8 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.37 108.30 3.07 0.30 N 174 8 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 114.56 108.30 6.26 0.30 N 175 8 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 111.59 108.30 3.29 0.30 N 176 8 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.95 108.30 2.65 0.30 N 177 8 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 112.85 108.30 4.55 0.30 N 178 8 "O4'" A DA 17 ? ? "C1'" A DA 17 ? ? N9 A DA 17 ? ? 112.52 108.30 4.22 0.30 N 179 8 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 111.61 108.30 3.31 0.30 N 180 8 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.23 108.30 3.93 0.30 N 181 8 "O4'" A DT 25 ? ? "C1'" A DT 25 ? ? N1 A DT 25 ? ? 110.58 108.30 2.28 0.30 N 182 8 "O4'" A DC 26 ? ? "C1'" A DC 26 ? ? N1 A DC 26 ? ? 110.81 108.30 2.51 0.30 N 183 8 "O4'" A DG 27 ? ? "C1'" A DG 27 ? ? "C2'" A DG 27 ? ? 100.17 105.90 -5.73 0.80 N 184 8 "O4'" A DG 27 ? ? "C1'" A DG 27 ? ? N9 A DG 27 ? ? 114.30 108.30 6.00 0.30 N 185 8 "O4'" A DA 29 ? ? "C1'" A DA 29 ? ? N9 A DA 29 ? ? 111.48 108.30 3.18 0.30 N 186 8 "O4'" A DT 32 ? ? "C1'" A DT 32 ? ? "C2'" A DT 32 ? ? 99.45 105.90 -6.45 0.80 N 187 8 "O4'" A DT 32 ? ? "C1'" A DT 32 ? ? N1 A DT 32 ? ? 114.08 108.30 5.78 0.30 N 188 8 C6 A DT 32 ? ? C5 A DT 32 ? ? C7 A DT 32 ? ? 118.88 122.90 -4.02 0.60 N 189 8 "O4'" A DC 33 ? ? "C1'" A DC 33 ? ? N1 A DC 33 ? ? 112.00 108.30 3.70 0.30 N 190 9 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.68 108.30 3.38 0.30 N 191 9 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 118.49 108.30 10.19 0.30 N 192 9 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.76 108.30 4.46 0.30 N 193 9 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.61 108.30 3.31 0.30 N 194 9 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.25 108.30 1.95 0.30 N 195 9 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.56 108.30 2.26 0.30 N 196 9 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 113.64 108.30 5.34 0.30 N 197 9 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 116.01 108.30 7.71 0.30 N 198 9 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.14 108.30 2.84 0.30 N 199 9 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 112.14 108.30 3.84 0.30 N 200 9 "C3'" A DA 15 ? ? "C2'" A DA 15 ? ? "C1'" A DA 15 ? ? 97.19 102.40 -5.21 0.80 N 201 9 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.13 108.30 2.83 0.30 N 202 9 "O4'" A DA 17 ? ? "C1'" A DA 17 ? ? N9 A DA 17 ? ? 112.77 108.30 4.47 0.30 N 203 9 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.61 108.30 2.31 0.30 N 204 9 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 112.58 108.30 4.28 0.30 N 205 9 "O4'" A DA 21 ? ? "C1'" A DA 21 ? ? N9 A DA 21 ? ? 111.07 108.30 2.77 0.30 N 206 9 "O4'" A DG 23 ? ? "C4'" A DG 23 ? ? "C3'" A DG 23 ? ? 109.74 106.00 3.74 0.60 N 207 9 "O4'" A DT 25 ? ? "C1'" A DT 25 ? ? N1 A DT 25 ? ? 110.79 108.30 2.49 0.30 N 208 9 "C4'" A DC 26 ? ? "C3'" A DC 26 ? ? "C2'" A DC 26 ? ? 97.77 102.20 -4.43 0.70 N 209 9 "O4'" A DC 26 ? ? "C1'" A DC 26 ? ? N1 A DC 26 ? ? 110.15 108.30 1.85 0.30 N 210 9 "O4'" A DG 27 ? ? "C1'" A DG 27 ? ? N9 A DG 27 ? ? 112.46 108.30 4.16 0.30 N 211 9 "O4'" A DA 28 ? ? "C1'" A DA 28 ? ? N9 A DA 28 ? ? 110.38 108.30 2.08 0.30 N 212 9 "O4'" A DA 29 ? ? "C1'" A DA 29 ? ? N9 A DA 29 ? ? 110.38 108.30 2.08 0.30 N 213 9 "O4'" A DC 33 ? ? "C1'" A DC 33 ? ? N1 A DC 33 ? ? 110.99 108.30 2.69 0.30 N 214 9 "O4'" A DG 34 ? ? "C1'" A DG 34 ? ? N9 A DG 34 ? ? 110.43 108.30 2.13 0.30 N 215 10 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.76 108.30 4.46 0.30 N 216 10 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 110.17 108.30 1.87 0.30 N 217 10 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 111.68 108.30 3.38 0.30 N 218 10 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.00 108.30 2.70 0.30 N 219 10 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 112.50 108.30 4.20 0.30 N 220 10 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.91 108.30 4.61 0.30 N 221 10 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 114.19 108.30 5.89 0.30 N 222 10 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 114.65 108.30 6.35 0.30 N 223 10 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.80 108.30 2.50 0.30 N 224 10 "O4'" A DA 18 ? ? "C1'" A DA 18 ? ? N9 A DA 18 ? ? 112.45 108.30 4.15 0.30 N 225 10 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 112.29 108.30 3.99 0.30 N 226 10 "O4'" A DA 21 ? ? "C1'" A DA 21 ? ? N9 A DA 21 ? ? 112.16 108.30 3.86 0.30 N 227 10 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 110.33 108.30 2.03 0.30 N 228 10 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 113.60 108.30 5.30 0.30 N 229 10 "O4'" A DC 26 ? ? "C1'" A DC 26 ? ? N1 A DC 26 ? ? 110.12 108.30 1.82 0.30 N 230 10 "O4'" A DG 27 ? ? "C1'" A DG 27 ? ? N9 A DG 27 ? ? 114.02 108.30 5.72 0.30 N 231 10 "O4'" A DA 28 ? ? "C1'" A DA 28 ? ? N9 A DA 28 ? ? 110.59 108.30 2.29 0.30 N 232 10 "O4'" A DA 29 ? ? "C1'" A DA 29 ? ? N9 A DA 29 ? ? 110.51 108.30 2.21 0.30 N 233 10 "O4'" A DG 31 ? ? "C1'" A DG 31 ? ? N9 A DG 31 ? ? 110.69 108.30 2.39 0.30 N 234 10 "O4'" A DC 33 ? ? "C1'" A DC 33 ? ? N1 A DC 33 ? ? 112.14 108.30 3.84 0.30 N 235 10 "O4'" A DG 34 ? ? "C1'" A DG 34 ? ? N9 A DG 34 ? ? 110.69 108.30 2.39 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC A 1 ? ? 0.060 'SIDE CHAIN' 2 1 DG A 5 ? ? 0.104 'SIDE CHAIN' 3 1 DA A 15 ? ? 0.064 'SIDE CHAIN' 4 1 DG A 23 ? ? 0.072 'SIDE CHAIN' 5 1 DT A 25 ? ? 0.087 'SIDE CHAIN' 6 1 DG A 31 ? ? 0.062 'SIDE CHAIN' 7 2 DG A 5 ? ? 0.073 'SIDE CHAIN' 8 2 DG A 9 ? ? 0.068 'SIDE CHAIN' 9 2 DT A 13 ? ? 0.062 'SIDE CHAIN' 10 2 DA A 21 ? ? 0.057 'SIDE CHAIN' 11 2 DG A 23 ? ? 0.077 'SIDE CHAIN' 12 2 DA A 28 ? ? 0.089 'SIDE CHAIN' 13 2 DG A 31 ? ? 0.090 'SIDE CHAIN' 14 3 DG A 5 ? ? 0.104 'SIDE CHAIN' 15 3 DT A 6 ? ? 0.059 'SIDE CHAIN' 16 3 DA A 21 ? ? 0.054 'SIDE CHAIN' 17 3 DG A 23 ? ? 0.088 'SIDE CHAIN' 18 3 DG A 31 ? ? 0.068 'SIDE CHAIN' 19 3 DT A 32 ? ? 0.062 'SIDE CHAIN' 20 4 DG A 5 ? ? 0.071 'SIDE CHAIN' 21 4 DA A 18 ? ? 0.060 'SIDE CHAIN' 22 4 DC A 19 ? ? 0.065 'SIDE CHAIN' 23 4 DG A 27 ? ? 0.067 'SIDE CHAIN' 24 4 DG A 30 ? ? 0.056 'SIDE CHAIN' 25 4 DG A 31 ? ? 0.064 'SIDE CHAIN' 26 5 DC A 1 ? ? 0.074 'SIDE CHAIN' 27 5 DG A 5 ? ? 0.075 'SIDE CHAIN' 28 5 DT A 7 ? ? 0.073 'SIDE CHAIN' 29 5 DG A 14 ? ? 0.082 'SIDE CHAIN' 30 5 DT A 25 ? ? 0.076 'SIDE CHAIN' 31 5 DG A 31 ? ? 0.074 'SIDE CHAIN' 32 5 DT A 32 ? ? 0.080 'SIDE CHAIN' 33 6 DG A 5 ? ? 0.076 'SIDE CHAIN' 34 6 DA A 18 ? ? 0.051 'SIDE CHAIN' 35 6 DG A 20 ? ? 0.066 'SIDE CHAIN' 36 6 DA A 21 ? ? 0.061 'SIDE CHAIN' 37 6 DA A 22 ? ? 0.081 'SIDE CHAIN' 38 6 DT A 24 ? ? 0.058 'SIDE CHAIN' 39 6 DT A 25 ? ? 0.092 'SIDE CHAIN' 40 6 DG A 31 ? ? 0.085 'SIDE CHAIN' 41 7 DG A 5 ? ? 0.056 'SIDE CHAIN' 42 7 DG A 20 ? ? 0.057 'SIDE CHAIN' 43 7 DT A 24 ? ? 0.112 'SIDE CHAIN' 44 7 DG A 31 ? ? 0.084 'SIDE CHAIN' 45 8 DC A 10 ? ? 0.147 'SIDE CHAIN' 46 8 DG A 14 ? ? 0.060 'SIDE CHAIN' 47 8 DG A 16 ? ? 0.083 'SIDE CHAIN' 48 8 DG A 20 ? ? 0.075 'SIDE CHAIN' 49 8 DG A 27 ? ? 0.049 'SIDE CHAIN' 50 8 DG A 31 ? ? 0.083 'SIDE CHAIN' 51 9 DG A 5 ? ? 0.062 'SIDE CHAIN' 52 9 DG A 9 ? ? 0.101 'SIDE CHAIN' 53 9 DG A 11 ? ? 0.075 'SIDE CHAIN' 54 9 DG A 14 ? ? 0.082 'SIDE CHAIN' 55 9 DA A 15 ? ? 0.094 'SIDE CHAIN' 56 9 DA A 22 ? ? 0.052 'SIDE CHAIN' 57 9 DG A 31 ? ? 0.061 'SIDE CHAIN' 58 9 DT A 32 ? ? 0.097 'SIDE CHAIN' 59 9 DC A 33 ? ? 0.067 'SIDE CHAIN' 60 10 DC A 1 ? ? 0.057 'SIDE CHAIN' 61 10 DG A 5 ? ? 0.060 'SIDE CHAIN' 62 10 DC A 10 ? ? 0.099 'SIDE CHAIN' 63 10 DA A 15 ? ? 0.064 'SIDE CHAIN' 64 10 DA A 21 ? ? 0.061 'SIDE CHAIN' 65 10 DT A 32 ? ? 0.060 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 9KTJ _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 9KTJ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '0.8 mM DNA, 0.8 mM ATP, 10 mM sodium phosphate, 50 mM sodium chloride, 10 mM magnesium chloride, 0.02 mM DSS, 99.96%D2O' 99.96%D2O 1 solution ? 2 '0.8 mM DNA, 0.8 mM ATP, 10 mM sodium phosphate, 50 mM sodium chloride, 10 mM magnesium chloride, 0.02 mM DSS, 90% H2O/10% D2O' '90% H2O/10% D2O' 2 solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 DNA 0.8 ? mM 'natural abundance' 1 ATP 0.8 ? mM 'natural abundance' 1 'sodium phosphate' 10 ? mM 'natural abundance' 1 'sodium chloride' 50 ? mM 'natural abundance' 1 'magnesium chloride' 10 ? mM 'natural abundance' 1 DSS 0.02 ? mM 'natural abundance' 2 DNA 0.8 ? mM 'natural abundance' 2 ATP 0.8 ? mM 'natural abundance' 2 'sodium phosphate' 10 ? mM 'natural abundance' 2 'sodium chloride' 50 ? mM 'natural abundance' 2 'magnesium chloride' 10 ? mM 'natural abundance' 2 DSS 0.02 ? mM 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.ionic_strength 70 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label 1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 4 1 2 '2D 1H-1H NOESY' 1 isotropic 2 1 1 '2D 1H-1H COSY' 1 isotropic 3 1 1 '2D 1H-1H TOCSY' 1 isotropic # loop_ _pdbx_nmr_refine.entry_id _pdbx_nmr_refine.method _pdbx_nmr_refine.details _pdbx_nmr_refine.software_ordinal 9KTJ 'simulated annealing' ? 2 9KTJ 'energy minimization' ? 3 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' TopSpin ? 'Bruker Biospin' 2 'structure calculation' GROMACS ? 'GROMACS development team' 3 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ATP PG P N N 1 ATP O1G O N N 2 ATP O2G O N N 3 ATP O3G O N N 4 ATP PB P N R 5 ATP O1B O N N 6 ATP O2B O N N 7 ATP O3B O N N 8 ATP PA P N R 9 ATP O1A O N N 10 ATP O2A O N N 11 ATP O3A O N N 12 ATP "O5'" O N N 13 ATP "C5'" C N N 14 ATP "C4'" C N R 15 ATP "O4'" O N N 16 ATP "C3'" C N S 17 ATP "O3'" O N N 18 ATP "C2'" C N R 19 ATP "O2'" O N N 20 ATP "C1'" C N R 21 ATP N9 N Y N 22 ATP C8 C Y N 23 ATP N7 N Y N 24 ATP C5 C Y N 25 ATP C6 C Y N 26 ATP N6 N N N 27 ATP N1 N Y N 28 ATP C2 C Y N 29 ATP N3 N Y N 30 ATP C4 C Y N 31 ATP HOG2 H N N 32 ATP HOG3 H N N 33 ATP HOB2 H N N 34 ATP HOA2 H N N 35 ATP "H5'1" H N N 36 ATP "H5'2" H N N 37 ATP "H4'" H N N 38 ATP "H3'" H N N 39 ATP "HO3'" H N N 40 ATP "H2'" H N N 41 ATP "HO2'" H N N 42 ATP "H1'" H N N 43 ATP H8 H N N 44 ATP HN61 H N N 45 ATP HN62 H N N 46 ATP H2 H N N 47 DA OP3 O N N 48 DA P P N N 49 DA OP1 O N N 50 DA OP2 O N N 51 DA "O5'" O N N 52 DA "C5'" C N N 53 DA "C4'" C N R 54 DA "O4'" O N N 55 DA "C3'" C N S 56 DA "O3'" O N N 57 DA "C2'" C N N 58 DA "C1'" C N R 59 DA N9 N Y N 60 DA C8 C Y N 61 DA N7 N Y N 62 DA C5 C Y N 63 DA C6 C Y N 64 DA N6 N N N 65 DA N1 N Y N 66 DA C2 C Y N 67 DA N3 N Y N 68 DA C4 C Y N 69 DA HOP3 H N N 70 DA HOP2 H N N 71 DA "H5'" H N N 72 DA "H5''" H N N 73 DA "H4'" H N N 74 DA "H3'" H N N 75 DA "HO3'" H N N 76 DA "H2'" H N N 77 DA "H2''" H N N 78 DA "H1'" H N N 79 DA H8 H N N 80 DA H61 H N N 81 DA H62 H N N 82 DA H2 H N N 83 DC OP3 O N N 84 DC P P N N 85 DC OP1 O N N 86 DC OP2 O N N 87 DC "O5'" O N N 88 DC "C5'" C N N 89 DC "C4'" C N R 90 DC "O4'" O N N 91 DC "C3'" C N S 92 DC "O3'" O N N 93 DC "C2'" C N N 94 DC "C1'" C N R 95 DC N1 N N N 96 DC C2 C N N 97 DC O2 O N N 98 DC N3 N N N 99 DC C4 C N N 100 DC N4 N N N 101 DC C5 C N N 102 DC C6 C N N 103 DC HOP3 H N N 104 DC HOP2 H N N 105 DC "H5'" H N N 106 DC "H5''" H N N 107 DC "H4'" H N N 108 DC "H3'" H N N 109 DC "HO3'" H N N 110 DC "H2'" H N N 111 DC "H2''" H N N 112 DC "H1'" H N N 113 DC H41 H N N 114 DC H42 H N N 115 DC H5 H N N 116 DC H6 H N N 117 DG OP3 O N N 118 DG P P N N 119 DG OP1 O N N 120 DG OP2 O N N 121 DG "O5'" O N N 122 DG "C5'" C N N 123 DG "C4'" C N R 124 DG "O4'" O N N 125 DG "C3'" C N S 126 DG "O3'" O N N 127 DG "C2'" C N N 128 DG "C1'" C N R 129 DG N9 N Y N 130 DG C8 C Y N 131 DG N7 N Y N 132 DG C5 C Y N 133 DG C6 C N N 134 DG O6 O N N 135 DG N1 N N N 136 DG C2 C N N 137 DG N2 N N N 138 DG N3 N N N 139 DG C4 C Y N 140 DG HOP3 H N N 141 DG HOP2 H N N 142 DG "H5'" H N N 143 DG "H5''" H N N 144 DG "H4'" H N N 145 DG "H3'" H N N 146 DG "HO3'" H N N 147 DG "H2'" H N N 148 DG "H2''" H N N 149 DG "H1'" H N N 150 DG H8 H N N 151 DG H1 H N N 152 DG H21 H N N 153 DG H22 H N N 154 DT OP3 O N N 155 DT P P N N 156 DT OP1 O N N 157 DT OP2 O N N 158 DT "O5'" O N N 159 DT "C5'" C N N 160 DT "C4'" C N R 161 DT "O4'" O N N 162 DT "C3'" C N S 163 DT "O3'" O N N 164 DT "C2'" C N N 165 DT "C1'" C N R 166 DT N1 N N N 167 DT C2 C N N 168 DT O2 O N N 169 DT N3 N N N 170 DT C4 C N N 171 DT O4 O N N 172 DT C5 C N N 173 DT C7 C N N 174 DT C6 C N N 175 DT HOP3 H N N 176 DT HOP2 H N N 177 DT "H5'" H N N 178 DT "H5''" H N N 179 DT "H4'" H N N 180 DT "H3'" H N N 181 DT "HO3'" H N N 182 DT "H2'" H N N 183 DT "H2''" H N N 184 DT "H1'" H N N 185 DT H3 H N N 186 DT H71 H N N 187 DT H72 H N N 188 DT H73 H N N 189 DT H6 H N N 190 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ATP PG O1G doub N N 1 ATP PG O2G sing N N 2 ATP PG O3G sing N N 3 ATP PG O3B sing N N 4 ATP O2G HOG2 sing N N 5 ATP O3G HOG3 sing N N 6 ATP PB O1B doub N N 7 ATP PB O2B sing N N 8 ATP PB O3B sing N N 9 ATP PB O3A sing N N 10 ATP O2B HOB2 sing N N 11 ATP PA O1A doub N N 12 ATP PA O2A sing N N 13 ATP PA O3A sing N N 14 ATP PA "O5'" sing N N 15 ATP O2A HOA2 sing N N 16 ATP "O5'" "C5'" sing N N 17 ATP "C5'" "C4'" sing N N 18 ATP "C5'" "H5'1" sing N N 19 ATP "C5'" "H5'2" sing N N 20 ATP "C4'" "O4'" sing N N 21 ATP "C4'" "C3'" sing N N 22 ATP "C4'" "H4'" sing N N 23 ATP "O4'" "C1'" sing N N 24 ATP "C3'" "O3'" sing N N 25 ATP "C3'" "C2'" sing N N 26 ATP "C3'" "H3'" sing N N 27 ATP "O3'" "HO3'" sing N N 28 ATP "C2'" "O2'" sing N N 29 ATP "C2'" "C1'" sing N N 30 ATP "C2'" "H2'" sing N N 31 ATP "O2'" "HO2'" sing N N 32 ATP "C1'" N9 sing N N 33 ATP "C1'" "H1'" sing N N 34 ATP N9 C8 sing Y N 35 ATP N9 C4 sing Y N 36 ATP C8 N7 doub Y N 37 ATP C8 H8 sing N N 38 ATP N7 C5 sing Y N 39 ATP C5 C6 sing Y N 40 ATP C5 C4 doub Y N 41 ATP C6 N6 sing N N 42 ATP C6 N1 doub Y N 43 ATP N6 HN61 sing N N 44 ATP N6 HN62 sing N N 45 ATP N1 C2 sing Y N 46 ATP C2 N3 doub Y N 47 ATP C2 H2 sing N N 48 ATP N3 C4 sing Y N 49 DA OP3 P sing N N 50 DA OP3 HOP3 sing N N 51 DA P OP1 doub N N 52 DA P OP2 sing N N 53 DA P "O5'" sing N N 54 DA OP2 HOP2 sing N N 55 DA "O5'" "C5'" sing N N 56 DA "C5'" "C4'" sing N N 57 DA "C5'" "H5'" sing N N 58 DA "C5'" "H5''" sing N N 59 DA "C4'" "O4'" sing N N 60 DA "C4'" "C3'" sing N N 61 DA "C4'" "H4'" sing N N 62 DA "O4'" "C1'" sing N N 63 DA "C3'" "O3'" sing N N 64 DA "C3'" "C2'" sing N N 65 DA "C3'" "H3'" sing N N 66 DA "O3'" "HO3'" sing N N 67 DA "C2'" "C1'" sing N N 68 DA "C2'" "H2'" sing N N 69 DA "C2'" "H2''" sing N N 70 DA "C1'" N9 sing N N 71 DA "C1'" "H1'" sing N N 72 DA N9 C8 sing Y N 73 DA N9 C4 sing Y N 74 DA C8 N7 doub Y N 75 DA C8 H8 sing N N 76 DA N7 C5 sing Y N 77 DA C5 C6 sing Y N 78 DA C5 C4 doub Y N 79 DA C6 N6 sing N N 80 DA C6 N1 doub Y N 81 DA N6 H61 sing N N 82 DA N6 H62 sing N N 83 DA N1 C2 sing Y N 84 DA C2 N3 doub Y N 85 DA C2 H2 sing N N 86 DA N3 C4 sing Y N 87 DC OP3 P sing N N 88 DC OP3 HOP3 sing N N 89 DC P OP1 doub N N 90 DC P OP2 sing N N 91 DC P "O5'" sing N N 92 DC OP2 HOP2 sing N N 93 DC "O5'" "C5'" sing N N 94 DC "C5'" "C4'" sing N N 95 DC "C5'" "H5'" sing N N 96 DC "C5'" "H5''" sing N N 97 DC "C4'" "O4'" sing N N 98 DC "C4'" "C3'" sing N N 99 DC "C4'" "H4'" sing N N 100 DC "O4'" "C1'" sing N N 101 DC "C3'" "O3'" sing N N 102 DC "C3'" "C2'" sing N N 103 DC "C3'" "H3'" sing N N 104 DC "O3'" "HO3'" sing N N 105 DC "C2'" "C1'" sing N N 106 DC "C2'" "H2'" sing N N 107 DC "C2'" "H2''" sing N N 108 DC "C1'" N1 sing N N 109 DC "C1'" "H1'" sing N N 110 DC N1 C2 sing N N 111 DC N1 C6 sing N N 112 DC C2 O2 doub N N 113 DC C2 N3 sing N N 114 DC N3 C4 doub N N 115 DC C4 N4 sing N N 116 DC C4 C5 sing N N 117 DC N4 H41 sing N N 118 DC N4 H42 sing N N 119 DC C5 C6 doub N N 120 DC C5 H5 sing N N 121 DC C6 H6 sing N N 122 DG OP3 P sing N N 123 DG OP3 HOP3 sing N N 124 DG P OP1 doub N N 125 DG P OP2 sing N N 126 DG P "O5'" sing N N 127 DG OP2 HOP2 sing N N 128 DG "O5'" "C5'" sing N N 129 DG "C5'" "C4'" sing N N 130 DG "C5'" "H5'" sing N N 131 DG "C5'" "H5''" sing N N 132 DG "C4'" "O4'" sing N N 133 DG "C4'" "C3'" sing N N 134 DG "C4'" "H4'" sing N N 135 DG "O4'" "C1'" sing N N 136 DG "C3'" "O3'" sing N N 137 DG "C3'" "C2'" sing N N 138 DG "C3'" "H3'" sing N N 139 DG "O3'" "HO3'" sing N N 140 DG "C2'" "C1'" sing N N 141 DG "C2'" "H2'" sing N N 142 DG "C2'" "H2''" sing N N 143 DG "C1'" N9 sing N N 144 DG "C1'" "H1'" sing N N 145 DG N9 C8 sing Y N 146 DG N9 C4 sing Y N 147 DG C8 N7 doub Y N 148 DG C8 H8 sing N N 149 DG N7 C5 sing Y N 150 DG C5 C6 sing N N 151 DG C5 C4 doub Y N 152 DG C6 O6 doub N N 153 DG C6 N1 sing N N 154 DG N1 C2 sing N N 155 DG N1 H1 sing N N 156 DG C2 N2 sing N N 157 DG C2 N3 doub N N 158 DG N2 H21 sing N N 159 DG N2 H22 sing N N 160 DG N3 C4 sing N N 161 DT OP3 P sing N N 162 DT OP3 HOP3 sing N N 163 DT P OP1 doub N N 164 DT P OP2 sing N N 165 DT P "O5'" sing N N 166 DT OP2 HOP2 sing N N 167 DT "O5'" "C5'" sing N N 168 DT "C5'" "C4'" sing N N 169 DT "C5'" "H5'" sing N N 170 DT "C5'" "H5''" sing N N 171 DT "C4'" "O4'" sing N N 172 DT "C4'" "C3'" sing N N 173 DT "C4'" "H4'" sing N N 174 DT "O4'" "C1'" sing N N 175 DT "C3'" "O3'" sing N N 176 DT "C3'" "C2'" sing N N 177 DT "C3'" "H3'" sing N N 178 DT "O3'" "HO3'" sing N N 179 DT "C2'" "C1'" sing N N 180 DT "C2'" "H2'" sing N N 181 DT "C2'" "H2''" sing N N 182 DT "C1'" N1 sing N N 183 DT "C1'" "H1'" sing N N 184 DT N1 C2 sing N N 185 DT N1 C6 sing N N 186 DT C2 O2 doub N N 187 DT C2 N3 sing N N 188 DT N3 C4 sing N N 189 DT N3 H3 sing N N 190 DT C4 O4 doub N N 191 DT C4 C5 sing N N 192 DT C5 C7 sing N N 193 DT C5 C6 doub N N 194 DT C7 H71 sing N N 195 DT C7 H72 sing N N 196 DT C7 H73 sing N N 197 DT C6 H6 sing N N 198 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9KTJ 'double helix' 9KTJ 'b-form double helix' 9KTJ 'hairpin loop' 9KTJ 'mismatched base pair' 9KTJ 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 A DG 34 1_555 0.151 -0.086 0.339 -8.568 -6.060 -2.456 1 A_DC1:DG34_A A 1 ? A 34 ? 19 1 1 A DG 2 1_555 A DC 33 1_555 -0.317 -0.128 -0.189 -6.174 -4.981 -1.540 2 A_DG2:DC33_A A 2 ? A 33 ? 19 1 1 A DA 3 1_555 A DT 32 1_555 0.222 0.053 0.202 5.588 -0.499 -7.529 3 A_DA3:DT32_A A 3 ? A 32 ? 20 1 1 A DC 4 1_555 A DG 31 1_555 0.152 -0.058 -0.384 12.499 10.326 0.966 4 A_DC4:DG31_A A 4 ? A 31 ? 19 1 1 A DT 7 1_555 A DA 29 1_555 0.341 -0.144 -0.669 16.188 2.663 -0.559 5 A_DT7:DA29_A A 7 ? A 29 ? 20 1 1 A DT 8 1_555 A DA 28 1_555 0.416 -0.092 -0.933 24.932 -11.597 5.003 6 A_DT8:DA28_A A 8 ? A 28 ? 20 1 1 A DG 11 1_555 A DT 13 1_555 0.003 -4.070 0.335 -41.546 39.705 -87.522 7 A_DG11:DT13_A A 11 ? A 13 ? ? 6 1 A DG 16 1_555 A DC 26 1_555 -0.432 -0.146 -0.193 -6.921 0.445 -1.353 8 A_DG16:DC26_A A 16 ? A 26 ? 19 1 1 A DA 17 1_555 A DT 25 1_555 -0.093 -0.006 0.273 6.613 0.697 0.148 9 A_DA17:DT25_A A 17 ? A 25 ? 20 1 1 A DA 18 1_555 A DT 24 1_555 -0.003 -0.031 -0.158 -4.409 -5.722 -2.050 10 A_DA18:DT24_A A 18 ? A 24 ? 20 1 1 A DC 19 1_555 A DG 23 1_555 0.369 -0.142 -0.511 11.491 9.591 -1.328 11 A_DC19:DG23_A A 19 ? A 23 ? 19 1 1 A DG 20 1_555 A DA 22 1_555 6.229 -3.998 1.146 35.055 9.719 15.623 12 A_DG20:DA22_A A 20 ? A 22 ? 11 9 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 A DG 34 1_555 A DG 2 1_555 A DC 33 1_555 1.062 0.799 3.249 5.749 4.663 30.721 0.566 -0.841 3.467 8.645 -10.659 31.580 1 AA_DC1DG2:DC33DG34_AA A 1 ? A 34 ? A 2 ? A 33 ? 1 A DG 2 1_555 A DC 33 1_555 A DA 3 1_555 A DT 32 1_555 -1.816 0.824 3.144 -6.300 8.008 33.395 0.110 2.035 3.517 13.549 10.658 34.873 2 AA_DG2DA3:DT32DC33_AA A 2 ? A 33 ? A 3 ? A 32 ? 1 A DA 3 1_555 A DT 32 1_555 A DC 4 1_555 A DG 31 1_555 1.760 -0.866 3.437 -1.105 -0.413 29.556 -1.606 -3.691 3.382 -0.809 2.164 29.579 3 AA_DA3DC4:DG31DT32_AA A 3 ? A 32 ? A 4 ? A 31 ? 1 A DC 4 1_555 A DG 31 1_555 A DT 7 1_555 A DA 29 1_555 -5.671 -0.199 1.966 -24.108 52.494 79.238 -0.928 3.477 2.800 37.133 17.054 95.171 4 AA_DC4DT7:DA29DG31_AA A 4 ? A 31 ? A 7 ? A 29 ? 1 A DT 7 1_555 A DA 29 1_555 A DT 8 1_555 A DA 28 1_555 0.703 -0.433 3.086 0.844 0.324 32.124 -0.838 -1.128 3.099 0.585 -1.525 32.136 5 AA_DT7DT8:DA28DA29_AA A 7 ? A 29 ? A 8 ? A 28 ? 1 A DG 16 1_555 A DC 26 1_555 A DA 17 1_555 A DT 25 1_555 0.746 2.311 3.108 -3.769 8.783 16.837 2.064 -4.287 3.606 27.316 11.723 19.344 6 AA_DG16DA17:DT25DC26_AA A 16 ? A 26 ? A 17 ? A 25 ? 1 A DA 17 1_555 A DT 25 1_555 A DA 18 1_555 A DT 24 1_555 -0.780 1.900 4.400 -4.247 15.755 40.359 0.321 0.449 4.838 21.790 5.873 43.405 7 AA_DA17DA18:DT24DT25_AA A 17 ? A 25 ? A 18 ? A 24 ? 1 A DA 18 1_555 A DT 24 1_555 A DC 19 1_555 A DG 23 1_555 0.936 0.166 3.044 1.745 0.968 24.644 0.111 -1.685 3.106 2.262 -4.080 24.723 8 AA_DA18DC19:DG23DT24_AA A 18 ? A 24 ? A 19 ? A 23 ? 1 A DC 19 1_555 A DG 23 1_555 A DG 20 1_555 A DA 22 1_555 -0.166 1.167 2.683 -3.453 13.764 30.832 0.006 -0.216 2.928 24.338 6.105 33.869 9 AA_DC19DG20:DA22DG23_AA A 19 ? A 23 ? A 20 ? A 22 ? # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 9KTJ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_ #