data_9KXX # _entry.id 9KXX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.407 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9KXX pdb_00009kxx 10.2210/pdb9kxx/pdb WWPDB D_1300054239 ? ? EMDB EMD-62631 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-12-10 ? 2 'EM metadata' 1 0 2025-12-10 ? 3 'Half map' 1 0 2025-12-10 1 4 'Half map' 1 0 2025-12-10 2 5 Image 1 0 2025-12-10 ? 6 'Primary map' 1 0 2025-12-10 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Half map' repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 Image repository 'Initial release' ? ? 6 6 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9KXX _pdbx_database_status.recvd_initial_deposition_date 2024-12-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Inward-open Structure of human B0AT1' _pdbx_database_related.db_id EMD-62631 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email ikuko.miyaguchi@gmail.com _pdbx_contact_author.name_first Ikuko _pdbx_contact_author.name_last Miyaguchi _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-0021-7296 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Imazu, T.' 1 0009-0000-9340-380X 'Miyaguchi, I.' 2 0000-0003-0021-7296 'Hiraizumi, M.' 3 0000-0002-4340-2937 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure-guided development of a potent human B0AT1 inhibitor effective in a mouse model of phenylketonuria' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Imazu, T.' 1 ? primary 'Akashi, T.' 2 ? primary 'Hiraizumi, M.' 3 ? primary 'Inui, Y.' 4 ? primary 'Sasaki, W.' 5 ? primary 'Takahashi, T.' 6 ? primary 'Todoroki, H.' 7 ? primary 'Kumanomidou, T.' 8 ? primary 'Hisano, H.' 9 ? primary 'Asada, H.' 10 ? primary 'Kusakizako, T.' 11 ? primary 'Nishizawa, T.' 12 ? primary 'Iwata, S.' 13 ? primary 'Nureki, O.' 14 ? primary 'Miyaguchi, I.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sodium-dependent neutral amino acid transporter B(0)AT1' 68874.625 1 ? ? ? ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Solute carrier family 6 member 19,System B(0) neutral amino acid transporter AT1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNPGLDARIPSLAELETIEQEEASSRPKWDNKAQYMLTCLGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVLLGIPLL YLEFAIGQRLRRGSLGVWSSIHPALKGIGLASMLTSFMVGLYYNTIISWIMWYLFNSFQEPLPWSDCPLNENQTGYVDEC ARSSPVDYFWYRETLNISTSISDSGSIQWWMLLCLACAWSVLYMCTIRGIETTGKAVYITSTLPYVVLTIFLIRGLTLKG ATNGIVFLFTPNVTELAQPDTWLDAGAQVFFSFSLAFGGLISFASYNSVHNNCEKDSVIVSIINGFTSVYVAIVVYSVIG FRATQRYDDCFSTNILTLINGFDLPEGNVTQENFVDMQQRCNASDPAAYAQLVFQTCDINAFLSEAVEGTGLAFIVFTEA ITKMPLSPLWSVLFFIMLFCLGLSSMFGNMEGVVVPLQDLRVIPPKWPKEVLTGLICLGTFLIGLIFTLNSGQYWLSLLD SYAGSIPLLIIAFAEMFSVVWVYGVDRFNKDIEFMIGHKPNIFWQVTWRVVSPLLLLIIFLFFFVVEVSQELTYSIWDPG YEEFPKSQKISYPNWVYVVVVIVAGVPSLTIPGYAIYKLIRNHAQKPGDHQGLV ; _entity_poly.pdbx_seq_one_letter_code_can ;MNPGLDARIPSLAELETIEQEEASSRPKWDNKAQYMLTCLGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVLLGIPLL YLEFAIGQRLRRGSLGVWSSIHPALKGIGLASMLTSFMVGLYYNTIISWIMWYLFNSFQEPLPWSDCPLNENQTGYVDEC ARSSPVDYFWYRETLNISTSISDSGSIQWWMLLCLACAWSVLYMCTIRGIETTGKAVYITSTLPYVVLTIFLIRGLTLKG ATNGIVFLFTPNVTELAQPDTWLDAGAQVFFSFSLAFGGLISFASYNSVHNNCEKDSVIVSIINGFTSVYVAIVVYSVIG FRATQRYDDCFSTNILTLINGFDLPEGNVTQENFVDMQQRCNASDPAAYAQLVFQTCDINAFLSEAVEGTGLAFIVFTEA ITKMPLSPLWSVLFFIMLFCLGLSSMFGNMEGVVVPLQDLRVIPPKWPKEVLTGLICLGTFLIGLIFTLNSGQYWLSLLD SYAGSIPLLIIAFAEMFSVVWVYGVDRFNKDIEFMIGHKPNIFWQVTWRVVSPLLLLIIFLFFFVVEVSQELTYSIWDPG YEEFPKSQKISYPNWVYVVVVIVAGVPSLTIPGYAIYKLIRNHAQKPGDHQGLV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 PRO n 1 4 GLY n 1 5 LEU n 1 6 ASP n 1 7 ALA n 1 8 ARG n 1 9 ILE n 1 10 PRO n 1 11 SER n 1 12 LEU n 1 13 ALA n 1 14 GLU n 1 15 LEU n 1 16 GLU n 1 17 THR n 1 18 ILE n 1 19 GLU n 1 20 GLN n 1 21 GLU n 1 22 GLU n 1 23 ALA n 1 24 SER n 1 25 SER n 1 26 ARG n 1 27 PRO n 1 28 LYS n 1 29 TRP n 1 30 ASP n 1 31 ASN n 1 32 LYS n 1 33 ALA n 1 34 GLN n 1 35 TYR n 1 36 MET n 1 37 LEU n 1 38 THR n 1 39 CYS n 1 40 LEU n 1 41 GLY n 1 42 PHE n 1 43 CYS n 1 44 VAL n 1 45 GLY n 1 46 LEU n 1 47 GLY n 1 48 ASN n 1 49 VAL n 1 50 TRP n 1 51 ARG n 1 52 PHE n 1 53 PRO n 1 54 TYR n 1 55 LEU n 1 56 CYS n 1 57 GLN n 1 58 SER n 1 59 HIS n 1 60 GLY n 1 61 GLY n 1 62 GLY n 1 63 ALA n 1 64 PHE n 1 65 MET n 1 66 ILE n 1 67 PRO n 1 68 PHE n 1 69 LEU n 1 70 ILE n 1 71 LEU n 1 72 LEU n 1 73 VAL n 1 74 LEU n 1 75 LEU n 1 76 GLY n 1 77 ILE n 1 78 PRO n 1 79 LEU n 1 80 LEU n 1 81 TYR n 1 82 LEU n 1 83 GLU n 1 84 PHE n 1 85 ALA n 1 86 ILE n 1 87 GLY n 1 88 GLN n 1 89 ARG n 1 90 LEU n 1 91 ARG n 1 92 ARG n 1 93 GLY n 1 94 SER n 1 95 LEU n 1 96 GLY n 1 97 VAL n 1 98 TRP n 1 99 SER n 1 100 SER n 1 101 ILE n 1 102 HIS n 1 103 PRO n 1 104 ALA n 1 105 LEU n 1 106 LYS n 1 107 GLY n 1 108 ILE n 1 109 GLY n 1 110 LEU n 1 111 ALA n 1 112 SER n 1 113 MET n 1 114 LEU n 1 115 THR n 1 116 SER n 1 117 PHE n 1 118 MET n 1 119 VAL n 1 120 GLY n 1 121 LEU n 1 122 TYR n 1 123 TYR n 1 124 ASN n 1 125 THR n 1 126 ILE n 1 127 ILE n 1 128 SER n 1 129 TRP n 1 130 ILE n 1 131 MET n 1 132 TRP n 1 133 TYR n 1 134 LEU n 1 135 PHE n 1 136 ASN n 1 137 SER n 1 138 PHE n 1 139 GLN n 1 140 GLU n 1 141 PRO n 1 142 LEU n 1 143 PRO n 1 144 TRP n 1 145 SER n 1 146 ASP n 1 147 CYS n 1 148 PRO n 1 149 LEU n 1 150 ASN n 1 151 GLU n 1 152 ASN n 1 153 GLN n 1 154 THR n 1 155 GLY n 1 156 TYR n 1 157 VAL n 1 158 ASP n 1 159 GLU n 1 160 CYS n 1 161 ALA n 1 162 ARG n 1 163 SER n 1 164 SER n 1 165 PRO n 1 166 VAL n 1 167 ASP n 1 168 TYR n 1 169 PHE n 1 170 TRP n 1 171 TYR n 1 172 ARG n 1 173 GLU n 1 174 THR n 1 175 LEU n 1 176 ASN n 1 177 ILE n 1 178 SER n 1 179 THR n 1 180 SER n 1 181 ILE n 1 182 SER n 1 183 ASP n 1 184 SER n 1 185 GLY n 1 186 SER n 1 187 ILE n 1 188 GLN n 1 189 TRP n 1 190 TRP n 1 191 MET n 1 192 LEU n 1 193 LEU n 1 194 CYS n 1 195 LEU n 1 196 ALA n 1 197 CYS n 1 198 ALA n 1 199 TRP n 1 200 SER n 1 201 VAL n 1 202 LEU n 1 203 TYR n 1 204 MET n 1 205 CYS n 1 206 THR n 1 207 ILE n 1 208 ARG n 1 209 GLY n 1 210 ILE n 1 211 GLU n 1 212 THR n 1 213 THR n 1 214 GLY n 1 215 LYS n 1 216 ALA n 1 217 VAL n 1 218 TYR n 1 219 ILE n 1 220 THR n 1 221 SER n 1 222 THR n 1 223 LEU n 1 224 PRO n 1 225 TYR n 1 226 VAL n 1 227 VAL n 1 228 LEU n 1 229 THR n 1 230 ILE n 1 231 PHE n 1 232 LEU n 1 233 ILE n 1 234 ARG n 1 235 GLY n 1 236 LEU n 1 237 THR n 1 238 LEU n 1 239 LYS n 1 240 GLY n 1 241 ALA n 1 242 THR n 1 243 ASN n 1 244 GLY n 1 245 ILE n 1 246 VAL n 1 247 PHE n 1 248 LEU n 1 249 PHE n 1 250 THR n 1 251 PRO n 1 252 ASN n 1 253 VAL n 1 254 THR n 1 255 GLU n 1 256 LEU n 1 257 ALA n 1 258 GLN n 1 259 PRO n 1 260 ASP n 1 261 THR n 1 262 TRP n 1 263 LEU n 1 264 ASP n 1 265 ALA n 1 266 GLY n 1 267 ALA n 1 268 GLN n 1 269 VAL n 1 270 PHE n 1 271 PHE n 1 272 SER n 1 273 PHE n 1 274 SER n 1 275 LEU n 1 276 ALA n 1 277 PHE n 1 278 GLY n 1 279 GLY n 1 280 LEU n 1 281 ILE n 1 282 SER n 1 283 PHE n 1 284 ALA n 1 285 SER n 1 286 TYR n 1 287 ASN n 1 288 SER n 1 289 VAL n 1 290 HIS n 1 291 ASN n 1 292 ASN n 1 293 CYS n 1 294 GLU n 1 295 LYS n 1 296 ASP n 1 297 SER n 1 298 VAL n 1 299 ILE n 1 300 VAL n 1 301 SER n 1 302 ILE n 1 303 ILE n 1 304 ASN n 1 305 GLY n 1 306 PHE n 1 307 THR n 1 308 SER n 1 309 VAL n 1 310 TYR n 1 311 VAL n 1 312 ALA n 1 313 ILE n 1 314 VAL n 1 315 VAL n 1 316 TYR n 1 317 SER n 1 318 VAL n 1 319 ILE n 1 320 GLY n 1 321 PHE n 1 322 ARG n 1 323 ALA n 1 324 THR n 1 325 GLN n 1 326 ARG n 1 327 TYR n 1 328 ASP n 1 329 ASP n 1 330 CYS n 1 331 PHE n 1 332 SER n 1 333 THR n 1 334 ASN n 1 335 ILE n 1 336 LEU n 1 337 THR n 1 338 LEU n 1 339 ILE n 1 340 ASN n 1 341 GLY n 1 342 PHE n 1 343 ASP n 1 344 LEU n 1 345 PRO n 1 346 GLU n 1 347 GLY n 1 348 ASN n 1 349 VAL n 1 350 THR n 1 351 GLN n 1 352 GLU n 1 353 ASN n 1 354 PHE n 1 355 VAL n 1 356 ASP n 1 357 MET n 1 358 GLN n 1 359 GLN n 1 360 ARG n 1 361 CYS n 1 362 ASN n 1 363 ALA n 1 364 SER n 1 365 ASP n 1 366 PRO n 1 367 ALA n 1 368 ALA n 1 369 TYR n 1 370 ALA n 1 371 GLN n 1 372 LEU n 1 373 VAL n 1 374 PHE n 1 375 GLN n 1 376 THR n 1 377 CYS n 1 378 ASP n 1 379 ILE n 1 380 ASN n 1 381 ALA n 1 382 PHE n 1 383 LEU n 1 384 SER n 1 385 GLU n 1 386 ALA n 1 387 VAL n 1 388 GLU n 1 389 GLY n 1 390 THR n 1 391 GLY n 1 392 LEU n 1 393 ALA n 1 394 PHE n 1 395 ILE n 1 396 VAL n 1 397 PHE n 1 398 THR n 1 399 GLU n 1 400 ALA n 1 401 ILE n 1 402 THR n 1 403 LYS n 1 404 MET n 1 405 PRO n 1 406 LEU n 1 407 SER n 1 408 PRO n 1 409 LEU n 1 410 TRP n 1 411 SER n 1 412 VAL n 1 413 LEU n 1 414 PHE n 1 415 PHE n 1 416 ILE n 1 417 MET n 1 418 LEU n 1 419 PHE n 1 420 CYS n 1 421 LEU n 1 422 GLY n 1 423 LEU n 1 424 SER n 1 425 SER n 1 426 MET n 1 427 PHE n 1 428 GLY n 1 429 ASN n 1 430 MET n 1 431 GLU n 1 432 GLY n 1 433 VAL n 1 434 VAL n 1 435 VAL n 1 436 PRO n 1 437 LEU n 1 438 GLN n 1 439 ASP n 1 440 LEU n 1 441 ARG n 1 442 VAL n 1 443 ILE n 1 444 PRO n 1 445 PRO n 1 446 LYS n 1 447 TRP n 1 448 PRO n 1 449 LYS n 1 450 GLU n 1 451 VAL n 1 452 LEU n 1 453 THR n 1 454 GLY n 1 455 LEU n 1 456 ILE n 1 457 CYS n 1 458 LEU n 1 459 GLY n 1 460 THR n 1 461 PHE n 1 462 LEU n 1 463 ILE n 1 464 GLY n 1 465 LEU n 1 466 ILE n 1 467 PHE n 1 468 THR n 1 469 LEU n 1 470 ASN n 1 471 SER n 1 472 GLY n 1 473 GLN n 1 474 TYR n 1 475 TRP n 1 476 LEU n 1 477 SER n 1 478 LEU n 1 479 LEU n 1 480 ASP n 1 481 SER n 1 482 TYR n 1 483 ALA n 1 484 GLY n 1 485 SER n 1 486 ILE n 1 487 PRO n 1 488 LEU n 1 489 LEU n 1 490 ILE n 1 491 ILE n 1 492 ALA n 1 493 PHE n 1 494 ALA n 1 495 GLU n 1 496 MET n 1 497 PHE n 1 498 SER n 1 499 VAL n 1 500 VAL n 1 501 TRP n 1 502 VAL n 1 503 TYR n 1 504 GLY n 1 505 VAL n 1 506 ASP n 1 507 ARG n 1 508 PHE n 1 509 ASN n 1 510 LYS n 1 511 ASP n 1 512 ILE n 1 513 GLU n 1 514 PHE n 1 515 MET n 1 516 ILE n 1 517 GLY n 1 518 HIS n 1 519 LYS n 1 520 PRO n 1 521 ASN n 1 522 ILE n 1 523 PHE n 1 524 TRP n 1 525 GLN n 1 526 VAL n 1 527 THR n 1 528 TRP n 1 529 ARG n 1 530 VAL n 1 531 VAL n 1 532 SER n 1 533 PRO n 1 534 LEU n 1 535 LEU n 1 536 LEU n 1 537 LEU n 1 538 ILE n 1 539 ILE n 1 540 PHE n 1 541 LEU n 1 542 PHE n 1 543 PHE n 1 544 PHE n 1 545 VAL n 1 546 VAL n 1 547 GLU n 1 548 VAL n 1 549 SER n 1 550 GLN n 1 551 GLU n 1 552 LEU n 1 553 THR n 1 554 TYR n 1 555 SER n 1 556 ILE n 1 557 TRP n 1 558 ASP n 1 559 PRO n 1 560 GLY n 1 561 TYR n 1 562 GLU n 1 563 GLU n 1 564 PHE n 1 565 PRO n 1 566 LYS n 1 567 SER n 1 568 GLN n 1 569 LYS n 1 570 ILE n 1 571 SER n 1 572 TYR n 1 573 PRO n 1 574 ASN n 1 575 TRP n 1 576 VAL n 1 577 TYR n 1 578 VAL n 1 579 VAL n 1 580 VAL n 1 581 VAL n 1 582 ILE n 1 583 VAL n 1 584 ALA n 1 585 GLY n 1 586 VAL n 1 587 PRO n 1 588 SER n 1 589 LEU n 1 590 THR n 1 591 ILE n 1 592 PRO n 1 593 GLY n 1 594 TYR n 1 595 ALA n 1 596 ILE n 1 597 TYR n 1 598 LYS n 1 599 LEU n 1 600 ILE n 1 601 ARG n 1 602 ASN n 1 603 HIS n 1 604 ALA n 1 605 GLN n 1 606 LYS n 1 607 PRO n 1 608 GLY n 1 609 ASP n 1 610 HIS n 1 611 GLN n 1 612 GLY n 1 613 LEU n 1 614 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 614 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SLC6A19, B0AT1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 7 ? ? ? A . n A 1 2 ASN 2 8 ? ? ? A . n A 1 3 PRO 3 9 ? ? ? A . n A 1 4 GLY 4 10 ? ? ? A . n A 1 5 LEU 5 11 ? ? ? A . n A 1 6 ASP 6 12 ? ? ? A . n A 1 7 ALA 7 13 ? ? ? A . n A 1 8 ARG 8 14 ? ? ? A . n A 1 9 ILE 9 15 15 ILE ILE A . n A 1 10 PRO 10 16 16 PRO PRO A . n A 1 11 SER 11 17 17 SER SER A . n A 1 12 LEU 12 18 18 LEU LEU A . n A 1 13 ALA 13 19 19 ALA ALA A . n A 1 14 GLU 14 20 20 GLU GLU A . n A 1 15 LEU 15 21 21 LEU LEU A . n A 1 16 GLU 16 22 22 GLU GLU A . n A 1 17 THR 17 23 23 THR THR A . n A 1 18 ILE 18 24 24 ILE ILE A . n A 1 19 GLU 19 25 25 GLU GLU A . n A 1 20 GLN 20 26 26 GLN GLN A . n A 1 21 GLU 21 27 ? ? ? A . n A 1 22 GLU 22 28 ? ? ? A . n A 1 23 ALA 23 29 ? ? ? A . n A 1 24 SER 24 30 ? ? ? A . n A 1 25 SER 25 31 ? ? ? A . n A 1 26 ARG 26 32 ? ? ? A . n A 1 27 PRO 27 33 ? ? ? A . n A 1 28 LYS 28 34 ? ? ? A . n A 1 29 TRP 29 35 ? ? ? A . n A 1 30 ASP 30 36 ? ? ? A . n A 1 31 ASN 31 37 ? ? ? A . n A 1 32 LYS 32 38 ? ? ? A . n A 1 33 ALA 33 39 39 ALA ALA A . n A 1 34 GLN 34 40 40 GLN GLN A . n A 1 35 TYR 35 41 41 TYR TYR A . n A 1 36 MET 36 42 42 MET MET A . n A 1 37 LEU 37 43 43 LEU LEU A . n A 1 38 THR 38 44 44 THR THR A . n A 1 39 CYS 39 45 45 CYS CYS A . n A 1 40 LEU 40 46 46 LEU LEU A . n A 1 41 GLY 41 47 47 GLY GLY A . n A 1 42 PHE 42 48 48 PHE PHE A . n A 1 43 CYS 43 49 49 CYS CYS A . n A 1 44 VAL 44 50 50 VAL VAL A . n A 1 45 GLY 45 51 51 GLY GLY A . n A 1 46 LEU 46 52 52 LEU LEU A . n A 1 47 GLY 47 53 53 GLY GLY A . n A 1 48 ASN 48 54 54 ASN ASN A . n A 1 49 VAL 49 55 55 VAL VAL A . n A 1 50 TRP 50 56 56 TRP TRP A . n A 1 51 ARG 51 57 57 ARG ARG A . n A 1 52 PHE 52 58 58 PHE PHE A . n A 1 53 PRO 53 59 59 PRO PRO A . n A 1 54 TYR 54 60 60 TYR TYR A . n A 1 55 LEU 55 61 61 LEU LEU A . n A 1 56 CYS 56 62 62 CYS CYS A . n A 1 57 GLN 57 63 63 GLN GLN A . n A 1 58 SER 58 64 64 SER SER A . n A 1 59 HIS 59 65 65 HIS HIS A . n A 1 60 GLY 60 66 66 GLY GLY A . n A 1 61 GLY 61 67 67 GLY GLY A . n A 1 62 GLY 62 68 68 GLY GLY A . n A 1 63 ALA 63 69 69 ALA ALA A . n A 1 64 PHE 64 70 70 PHE PHE A . n A 1 65 MET 65 71 71 MET MET A . n A 1 66 ILE 66 72 72 ILE ILE A . n A 1 67 PRO 67 73 73 PRO PRO A . n A 1 68 PHE 68 74 74 PHE PHE A . n A 1 69 LEU 69 75 75 LEU LEU A . n A 1 70 ILE 70 76 76 ILE ILE A . n A 1 71 LEU 71 77 77 LEU LEU A . n A 1 72 LEU 72 78 78 LEU LEU A . n A 1 73 VAL 73 79 79 VAL VAL A . n A 1 74 LEU 74 80 80 LEU LEU A . n A 1 75 LEU 75 81 81 LEU LEU A . n A 1 76 GLY 76 82 82 GLY GLY A . n A 1 77 ILE 77 83 83 ILE ILE A . n A 1 78 PRO 78 84 84 PRO PRO A . n A 1 79 LEU 79 85 85 LEU LEU A . n A 1 80 LEU 80 86 86 LEU LEU A . n A 1 81 TYR 81 87 87 TYR TYR A . n A 1 82 LEU 82 88 88 LEU LEU A . n A 1 83 GLU 83 89 89 GLU GLU A . n A 1 84 PHE 84 90 90 PHE PHE A . n A 1 85 ALA 85 91 91 ALA ALA A . n A 1 86 ILE 86 92 92 ILE ILE A . n A 1 87 GLY 87 93 93 GLY GLY A . n A 1 88 GLN 88 94 94 GLN GLN A . n A 1 89 ARG 89 95 95 ARG ARG A . n A 1 90 LEU 90 96 96 LEU LEU A . n A 1 91 ARG 91 97 97 ARG ARG A . n A 1 92 ARG 92 98 98 ARG ARG A . n A 1 93 GLY 93 99 99 GLY GLY A . n A 1 94 SER 94 100 100 SER SER A . n A 1 95 LEU 95 101 101 LEU LEU A . n A 1 96 GLY 96 102 102 GLY GLY A . n A 1 97 VAL 97 103 103 VAL VAL A . n A 1 98 TRP 98 104 104 TRP TRP A . n A 1 99 SER 99 105 105 SER SER A . n A 1 100 SER 100 106 106 SER SER A . n A 1 101 ILE 101 107 107 ILE ILE A . n A 1 102 HIS 102 108 108 HIS HIS A . n A 1 103 PRO 103 109 109 PRO PRO A . n A 1 104 ALA 104 110 110 ALA ALA A . n A 1 105 LEU 105 111 111 LEU LEU A . n A 1 106 LYS 106 112 112 LYS LYS A . n A 1 107 GLY 107 113 113 GLY GLY A . n A 1 108 ILE 108 114 114 ILE ILE A . n A 1 109 GLY 109 115 115 GLY GLY A . n A 1 110 LEU 110 116 116 LEU LEU A . n A 1 111 ALA 111 117 117 ALA ALA A . n A 1 112 SER 112 118 118 SER SER A . n A 1 113 MET 113 119 119 MET MET A . n A 1 114 LEU 114 120 120 LEU LEU A . n A 1 115 THR 115 121 121 THR THR A . n A 1 116 SER 116 122 122 SER SER A . n A 1 117 PHE 117 123 123 PHE PHE A . n A 1 118 MET 118 124 124 MET MET A . n A 1 119 VAL 119 125 125 VAL VAL A . n A 1 120 GLY 120 126 126 GLY GLY A . n A 1 121 LEU 121 127 127 LEU LEU A . n A 1 122 TYR 122 128 128 TYR TYR A . n A 1 123 TYR 123 129 129 TYR TYR A . n A 1 124 ASN 124 130 130 ASN ASN A . n A 1 125 THR 125 131 131 THR THR A . n A 1 126 ILE 126 132 132 ILE ILE A . n A 1 127 ILE 127 133 133 ILE ILE A . n A 1 128 SER 128 134 134 SER SER A . n A 1 129 TRP 129 135 135 TRP TRP A . n A 1 130 ILE 130 136 136 ILE ILE A . n A 1 131 MET 131 137 137 MET MET A . n A 1 132 TRP 132 138 138 TRP TRP A . n A 1 133 TYR 133 139 139 TYR TYR A . n A 1 134 LEU 134 140 140 LEU LEU A . n A 1 135 PHE 135 141 141 PHE PHE A . n A 1 136 ASN 136 142 142 ASN ASN A . n A 1 137 SER 137 143 143 SER SER A . n A 1 138 PHE 138 144 144 PHE PHE A . n A 1 139 GLN 139 145 145 GLN GLN A . n A 1 140 GLU 140 146 146 GLU GLU A . n A 1 141 PRO 141 147 147 PRO PRO A . n A 1 142 LEU 142 148 148 LEU LEU A . n A 1 143 PRO 143 149 149 PRO PRO A . n A 1 144 TRP 144 150 150 TRP TRP A . n A 1 145 SER 145 151 151 SER SER A . n A 1 146 ASP 146 152 152 ASP ASP A . n A 1 147 CYS 147 153 153 CYS CYS A . n A 1 148 PRO 148 154 154 PRO PRO A . n A 1 149 LEU 149 155 155 LEU LEU A . n A 1 150 ASN 150 156 156 ASN ASN A . n A 1 151 GLU 151 157 157 GLU GLU A . n A 1 152 ASN 152 158 158 ASN ASN A . n A 1 153 GLN 153 159 159 GLN GLN A . n A 1 154 THR 154 160 160 THR THR A . n A 1 155 GLY 155 161 161 GLY GLY A . n A 1 156 TYR 156 162 162 TYR TYR A . n A 1 157 VAL 157 163 163 VAL VAL A . n A 1 158 ASP 158 164 164 ASP ASP A . n A 1 159 GLU 159 165 165 GLU GLU A . n A 1 160 CYS 160 166 166 CYS CYS A . n A 1 161 ALA 161 167 167 ALA ALA A . n A 1 162 ARG 162 168 168 ARG ARG A . n A 1 163 SER 163 169 169 SER SER A . n A 1 164 SER 164 170 170 SER SER A . n A 1 165 PRO 165 171 171 PRO PRO A . n A 1 166 VAL 166 172 172 VAL VAL A . n A 1 167 ASP 167 173 173 ASP ASP A . n A 1 168 TYR 168 174 174 TYR TYR A . n A 1 169 PHE 169 175 175 PHE PHE A . n A 1 170 TRP 170 176 176 TRP TRP A . n A 1 171 TYR 171 177 177 TYR TYR A . n A 1 172 ARG 172 178 178 ARG ARG A . n A 1 173 GLU 173 179 179 GLU GLU A . n A 1 174 THR 174 180 180 THR THR A . n A 1 175 LEU 175 181 181 LEU LEU A . n A 1 176 ASN 176 182 182 ASN ASN A . n A 1 177 ILE 177 183 183 ILE ILE A . n A 1 178 SER 178 184 184 SER SER A . n A 1 179 THR 179 185 185 THR THR A . n A 1 180 SER 180 186 186 SER SER A . n A 1 181 ILE 181 187 187 ILE ILE A . n A 1 182 SER 182 188 188 SER SER A . n A 1 183 ASP 183 189 189 ASP ASP A . n A 1 184 SER 184 190 190 SER SER A . n A 1 185 GLY 185 191 191 GLY GLY A . n A 1 186 SER 186 192 192 SER SER A . n A 1 187 ILE 187 193 193 ILE ILE A . n A 1 188 GLN 188 194 194 GLN GLN A . n A 1 189 TRP 189 195 195 TRP TRP A . n A 1 190 TRP 190 196 196 TRP TRP A . n A 1 191 MET 191 197 197 MET MET A . n A 1 192 LEU 192 198 198 LEU LEU A . n A 1 193 LEU 193 199 199 LEU LEU A . n A 1 194 CYS 194 200 200 CYS CYS A . n A 1 195 LEU 195 201 201 LEU LEU A . n A 1 196 ALA 196 202 202 ALA ALA A . n A 1 197 CYS 197 203 203 CYS CYS A . n A 1 198 ALA 198 204 204 ALA ALA A . n A 1 199 TRP 199 205 205 TRP TRP A . n A 1 200 SER 200 206 206 SER SER A . n A 1 201 VAL 201 207 207 VAL VAL A . n A 1 202 LEU 202 208 208 LEU LEU A . n A 1 203 TYR 203 209 209 TYR TYR A . n A 1 204 MET 204 210 210 MET MET A . n A 1 205 CYS 205 211 211 CYS CYS A . n A 1 206 THR 206 212 212 THR THR A . n A 1 207 ILE 207 213 213 ILE ILE A . n A 1 208 ARG 208 214 214 ARG ARG A . n A 1 209 GLY 209 215 215 GLY GLY A . n A 1 210 ILE 210 216 216 ILE ILE A . n A 1 211 GLU 211 217 217 GLU GLU A . n A 1 212 THR 212 218 218 THR THR A . n A 1 213 THR 213 219 219 THR THR A . n A 1 214 GLY 214 220 220 GLY GLY A . n A 1 215 LYS 215 221 221 LYS LYS A . n A 1 216 ALA 216 222 222 ALA ALA A . n A 1 217 VAL 217 223 223 VAL VAL A . n A 1 218 TYR 218 224 224 TYR TYR A . n A 1 219 ILE 219 225 225 ILE ILE A . n A 1 220 THR 220 226 226 THR THR A . n A 1 221 SER 221 227 227 SER SER A . n A 1 222 THR 222 228 228 THR THR A . n A 1 223 LEU 223 229 229 LEU LEU A . n A 1 224 PRO 224 230 230 PRO PRO A . n A 1 225 TYR 225 231 231 TYR TYR A . n A 1 226 VAL 226 232 232 VAL VAL A . n A 1 227 VAL 227 233 233 VAL VAL A . n A 1 228 LEU 228 234 234 LEU LEU A . n A 1 229 THR 229 235 235 THR THR A . n A 1 230 ILE 230 236 236 ILE ILE A . n A 1 231 PHE 231 237 237 PHE PHE A . n A 1 232 LEU 232 238 238 LEU LEU A . n A 1 233 ILE 233 239 239 ILE ILE A . n A 1 234 ARG 234 240 240 ARG ARG A . n A 1 235 GLY 235 241 241 GLY GLY A . n A 1 236 LEU 236 242 242 LEU LEU A . n A 1 237 THR 237 243 243 THR THR A . n A 1 238 LEU 238 244 244 LEU LEU A . n A 1 239 LYS 239 245 245 LYS LYS A . n A 1 240 GLY 240 246 246 GLY GLY A . n A 1 241 ALA 241 247 247 ALA ALA A . n A 1 242 THR 242 248 248 THR THR A . n A 1 243 ASN 243 249 249 ASN ASN A . n A 1 244 GLY 244 250 250 GLY GLY A . n A 1 245 ILE 245 251 251 ILE ILE A . n A 1 246 VAL 246 252 252 VAL VAL A . n A 1 247 PHE 247 253 253 PHE PHE A . n A 1 248 LEU 248 254 254 LEU LEU A . n A 1 249 PHE 249 255 255 PHE PHE A . n A 1 250 THR 250 256 256 THR THR A . n A 1 251 PRO 251 257 257 PRO PRO A . n A 1 252 ASN 252 258 258 ASN ASN A . n A 1 253 VAL 253 259 259 VAL VAL A . n A 1 254 THR 254 260 260 THR THR A . n A 1 255 GLU 255 261 261 GLU GLU A . n A 1 256 LEU 256 262 262 LEU LEU A . n A 1 257 ALA 257 263 263 ALA ALA A . n A 1 258 GLN 258 264 264 GLN GLN A . n A 1 259 PRO 259 265 265 PRO PRO A . n A 1 260 ASP 260 266 266 ASP ASP A . n A 1 261 THR 261 267 267 THR THR A . n A 1 262 TRP 262 268 268 TRP TRP A . n A 1 263 LEU 263 269 269 LEU LEU A . n A 1 264 ASP 264 270 270 ASP ASP A . n A 1 265 ALA 265 271 271 ALA ALA A . n A 1 266 GLY 266 272 272 GLY GLY A . n A 1 267 ALA 267 273 273 ALA ALA A . n A 1 268 GLN 268 274 274 GLN GLN A . n A 1 269 VAL 269 275 275 VAL VAL A . n A 1 270 PHE 270 276 276 PHE PHE A . n A 1 271 PHE 271 277 277 PHE PHE A . n A 1 272 SER 272 278 278 SER SER A . n A 1 273 PHE 273 279 279 PHE PHE A . n A 1 274 SER 274 280 280 SER SER A . n A 1 275 LEU 275 281 281 LEU LEU A . n A 1 276 ALA 276 282 282 ALA ALA A . n A 1 277 PHE 277 283 283 PHE PHE A . n A 1 278 GLY 278 284 284 GLY GLY A . n A 1 279 GLY 279 285 285 GLY GLY A . n A 1 280 LEU 280 286 286 LEU LEU A . n A 1 281 ILE 281 287 287 ILE ILE A . n A 1 282 SER 282 288 288 SER SER A . n A 1 283 PHE 283 289 289 PHE PHE A . n A 1 284 ALA 284 290 290 ALA ALA A . n A 1 285 SER 285 291 291 SER SER A . n A 1 286 TYR 286 292 292 TYR TYR A . n A 1 287 ASN 287 293 293 ASN ASN A . n A 1 288 SER 288 294 294 SER SER A . n A 1 289 VAL 289 295 295 VAL VAL A . n A 1 290 HIS 290 296 296 HIS HIS A . n A 1 291 ASN 291 297 297 ASN ASN A . n A 1 292 ASN 292 298 298 ASN ASN A . n A 1 293 CYS 293 299 299 CYS CYS A . n A 1 294 GLU 294 300 300 GLU GLU A . n A 1 295 LYS 295 301 301 LYS LYS A . n A 1 296 ASP 296 302 302 ASP ASP A . n A 1 297 SER 297 303 303 SER SER A . n A 1 298 VAL 298 304 304 VAL VAL A . n A 1 299 ILE 299 305 305 ILE ILE A . n A 1 300 VAL 300 306 306 VAL VAL A . n A 1 301 SER 301 307 307 SER SER A . n A 1 302 ILE 302 308 308 ILE ILE A . n A 1 303 ILE 303 309 309 ILE ILE A . n A 1 304 ASN 304 310 310 ASN ASN A . n A 1 305 GLY 305 311 311 GLY GLY A . n A 1 306 PHE 306 312 312 PHE PHE A . n A 1 307 THR 307 313 313 THR THR A . n A 1 308 SER 308 314 314 SER SER A . n A 1 309 VAL 309 315 315 VAL VAL A . n A 1 310 TYR 310 316 316 TYR TYR A . n A 1 311 VAL 311 317 317 VAL VAL A . n A 1 312 ALA 312 318 318 ALA ALA A . n A 1 313 ILE 313 319 319 ILE ILE A . n A 1 314 VAL 314 320 320 VAL VAL A . n A 1 315 VAL 315 321 321 VAL VAL A . n A 1 316 TYR 316 322 322 TYR TYR A . n A 1 317 SER 317 323 323 SER SER A . n A 1 318 VAL 318 324 324 VAL VAL A . n A 1 319 ILE 319 325 325 ILE ILE A . n A 1 320 GLY 320 326 326 GLY GLY A . n A 1 321 PHE 321 327 327 PHE PHE A . n A 1 322 ARG 322 328 328 ARG ARG A . n A 1 323 ALA 323 329 329 ALA ALA A . n A 1 324 THR 324 330 330 THR THR A . n A 1 325 GLN 325 331 331 GLN GLN A . n A 1 326 ARG 326 332 332 ARG ARG A . n A 1 327 TYR 327 333 333 TYR TYR A . n A 1 328 ASP 328 334 334 ASP ASP A . n A 1 329 ASP 329 335 335 ASP ASP A . n A 1 330 CYS 330 336 336 CYS CYS A . n A 1 331 PHE 331 337 ? ? ? A . n A 1 332 SER 332 338 ? ? ? A . n A 1 333 THR 333 339 ? ? ? A . n A 1 334 ASN 334 340 ? ? ? A . n A 1 335 ILE 335 341 ? ? ? A . n A 1 336 LEU 336 342 ? ? ? A . n A 1 337 THR 337 343 ? ? ? A . n A 1 338 LEU 338 344 ? ? ? A . n A 1 339 ILE 339 345 ? ? ? A . n A 1 340 ASN 340 346 ? ? ? A . n A 1 341 GLY 341 347 ? ? ? A . n A 1 342 PHE 342 348 ? ? ? A . n A 1 343 ASP 343 349 ? ? ? A . n A 1 344 LEU 344 350 ? ? ? A . n A 1 345 PRO 345 351 ? ? ? A . n A 1 346 GLU 346 352 ? ? ? A . n A 1 347 GLY 347 353 ? ? ? A . n A 1 348 ASN 348 354 ? ? ? A . n A 1 349 VAL 349 355 ? ? ? A . n A 1 350 THR 350 356 ? ? ? A . n A 1 351 GLN 351 357 ? ? ? A . n A 1 352 GLU 352 358 ? ? ? A . n A 1 353 ASN 353 359 ? ? ? A . n A 1 354 PHE 354 360 ? ? ? A . n A 1 355 VAL 355 361 ? ? ? A . n A 1 356 ASP 356 362 ? ? ? A . n A 1 357 MET 357 363 ? ? ? A . n A 1 358 GLN 358 364 ? ? ? A . n A 1 359 GLN 359 365 ? ? ? A . n A 1 360 ARG 360 366 ? ? ? A . n A 1 361 CYS 361 367 ? ? ? A . n A 1 362 ASN 362 368 ? ? ? A . n A 1 363 ALA 363 369 ? ? ? A . n A 1 364 SER 364 370 ? ? ? A . n A 1 365 ASP 365 371 ? ? ? A . n A 1 366 PRO 366 372 ? ? ? A . n A 1 367 ALA 367 373 ? ? ? A . n A 1 368 ALA 368 374 ? ? ? A . n A 1 369 TYR 369 375 ? ? ? A . n A 1 370 ALA 370 376 ? ? ? A . n A 1 371 GLN 371 377 ? ? ? A . n A 1 372 LEU 372 378 ? ? ? A . n A 1 373 VAL 373 379 ? ? ? A . n A 1 374 PHE 374 380 ? ? ? A . n A 1 375 GLN 375 381 ? ? ? A . n A 1 376 THR 376 382 ? ? ? A . n A 1 377 CYS 377 383 ? ? ? A . n A 1 378 ASP 378 384 384 ASP ASP A . n A 1 379 ILE 379 385 385 ILE ILE A . n A 1 380 ASN 380 386 386 ASN ASN A . n A 1 381 ALA 381 387 387 ALA ALA A . n A 1 382 PHE 382 388 388 PHE PHE A . n A 1 383 LEU 383 389 389 LEU LEU A . n A 1 384 SER 384 390 390 SER SER A . n A 1 385 GLU 385 391 391 GLU GLU A . n A 1 386 ALA 386 392 392 ALA ALA A . n A 1 387 VAL 387 393 393 VAL VAL A . n A 1 388 GLU 388 394 394 GLU GLU A . n A 1 389 GLY 389 395 395 GLY GLY A . n A 1 390 THR 390 396 396 THR THR A . n A 1 391 GLY 391 397 397 GLY GLY A . n A 1 392 LEU 392 398 398 LEU LEU A . n A 1 393 ALA 393 399 399 ALA ALA A . n A 1 394 PHE 394 400 400 PHE PHE A . n A 1 395 ILE 395 401 401 ILE ILE A . n A 1 396 VAL 396 402 402 VAL VAL A . n A 1 397 PHE 397 403 403 PHE PHE A . n A 1 398 THR 398 404 404 THR THR A . n A 1 399 GLU 399 405 405 GLU GLU A . n A 1 400 ALA 400 406 406 ALA ALA A . n A 1 401 ILE 401 407 407 ILE ILE A . n A 1 402 THR 402 408 408 THR THR A . n A 1 403 LYS 403 409 409 LYS LYS A . n A 1 404 MET 404 410 410 MET MET A . n A 1 405 PRO 405 411 411 PRO PRO A . n A 1 406 LEU 406 412 412 LEU LEU A . n A 1 407 SER 407 413 413 SER SER A . n A 1 408 PRO 408 414 414 PRO PRO A . n A 1 409 LEU 409 415 415 LEU LEU A . n A 1 410 TRP 410 416 416 TRP TRP A . n A 1 411 SER 411 417 417 SER SER A . n A 1 412 VAL 412 418 418 VAL VAL A . n A 1 413 LEU 413 419 419 LEU LEU A . n A 1 414 PHE 414 420 420 PHE PHE A . n A 1 415 PHE 415 421 421 PHE PHE A . n A 1 416 ILE 416 422 422 ILE ILE A . n A 1 417 MET 417 423 423 MET MET A . n A 1 418 LEU 418 424 424 LEU LEU A . n A 1 419 PHE 419 425 425 PHE PHE A . n A 1 420 CYS 420 426 426 CYS CYS A . n A 1 421 LEU 421 427 427 LEU LEU A . n A 1 422 GLY 422 428 428 GLY GLY A . n A 1 423 LEU 423 429 429 LEU LEU A . n A 1 424 SER 424 430 430 SER SER A . n A 1 425 SER 425 431 431 SER SER A . n A 1 426 MET 426 432 432 MET MET A . n A 1 427 PHE 427 433 433 PHE PHE A . n A 1 428 GLY 428 434 434 GLY GLY A . n A 1 429 ASN 429 435 435 ASN ASN A . n A 1 430 MET 430 436 436 MET MET A . n A 1 431 GLU 431 437 437 GLU GLU A . n A 1 432 GLY 432 438 438 GLY GLY A . n A 1 433 VAL 433 439 439 VAL VAL A . n A 1 434 VAL 434 440 440 VAL VAL A . n A 1 435 VAL 435 441 441 VAL VAL A . n A 1 436 PRO 436 442 442 PRO PRO A . n A 1 437 LEU 437 443 443 LEU LEU A . n A 1 438 GLN 438 444 444 GLN GLN A . n A 1 439 ASP 439 445 445 ASP ASP A . n A 1 440 LEU 440 446 446 LEU LEU A . n A 1 441 ARG 441 447 447 ARG ARG A . n A 1 442 VAL 442 448 448 VAL VAL A . n A 1 443 ILE 443 449 449 ILE ILE A . n A 1 444 PRO 444 450 450 PRO PRO A . n A 1 445 PRO 445 451 451 PRO PRO A . n A 1 446 LYS 446 452 452 LYS LYS A . n A 1 447 TRP 447 453 453 TRP TRP A . n A 1 448 PRO 448 454 454 PRO PRO A . n A 1 449 LYS 449 455 455 LYS LYS A . n A 1 450 GLU 450 456 456 GLU GLU A . n A 1 451 VAL 451 457 457 VAL VAL A . n A 1 452 LEU 452 458 458 LEU LEU A . n A 1 453 THR 453 459 459 THR THR A . n A 1 454 GLY 454 460 460 GLY GLY A . n A 1 455 LEU 455 461 461 LEU LEU A . n A 1 456 ILE 456 462 462 ILE ILE A . n A 1 457 CYS 457 463 463 CYS CYS A . n A 1 458 LEU 458 464 464 LEU LEU A . n A 1 459 GLY 459 465 465 GLY GLY A . n A 1 460 THR 460 466 466 THR THR A . n A 1 461 PHE 461 467 467 PHE PHE A . n A 1 462 LEU 462 468 468 LEU LEU A . n A 1 463 ILE 463 469 469 ILE ILE A . n A 1 464 GLY 464 470 470 GLY GLY A . n A 1 465 LEU 465 471 471 LEU LEU A . n A 1 466 ILE 466 472 472 ILE ILE A . n A 1 467 PHE 467 473 473 PHE PHE A . n A 1 468 THR 468 474 474 THR THR A . n A 1 469 LEU 469 475 475 LEU LEU A . n A 1 470 ASN 470 476 476 ASN ASN A . n A 1 471 SER 471 477 477 SER SER A . n A 1 472 GLY 472 478 478 GLY GLY A . n A 1 473 GLN 473 479 479 GLN GLN A . n A 1 474 TYR 474 480 480 TYR TYR A . n A 1 475 TRP 475 481 481 TRP TRP A . n A 1 476 LEU 476 482 482 LEU LEU A . n A 1 477 SER 477 483 483 SER SER A . n A 1 478 LEU 478 484 484 LEU LEU A . n A 1 479 LEU 479 485 485 LEU LEU A . n A 1 480 ASP 480 486 486 ASP ASP A . n A 1 481 SER 481 487 487 SER SER A . n A 1 482 TYR 482 488 488 TYR TYR A . n A 1 483 ALA 483 489 489 ALA ALA A . n A 1 484 GLY 484 490 490 GLY GLY A . n A 1 485 SER 485 491 491 SER SER A . n A 1 486 ILE 486 492 492 ILE ILE A . n A 1 487 PRO 487 493 493 PRO PRO A . n A 1 488 LEU 488 494 494 LEU LEU A . n A 1 489 LEU 489 495 495 LEU LEU A . n A 1 490 ILE 490 496 496 ILE ILE A . n A 1 491 ILE 491 497 497 ILE ILE A . n A 1 492 ALA 492 498 498 ALA ALA A . n A 1 493 PHE 493 499 499 PHE PHE A . n A 1 494 ALA 494 500 500 ALA ALA A . n A 1 495 GLU 495 501 501 GLU GLU A . n A 1 496 MET 496 502 502 MET MET A . n A 1 497 PHE 497 503 503 PHE PHE A . n A 1 498 SER 498 504 504 SER SER A . n A 1 499 VAL 499 505 505 VAL VAL A . n A 1 500 VAL 500 506 506 VAL VAL A . n A 1 501 TRP 501 507 507 TRP TRP A . n A 1 502 VAL 502 508 508 VAL VAL A . n A 1 503 TYR 503 509 509 TYR TYR A . n A 1 504 GLY 504 510 510 GLY GLY A . n A 1 505 VAL 505 511 511 VAL VAL A . n A 1 506 ASP 506 512 512 ASP ASP A . n A 1 507 ARG 507 513 513 ARG ARG A . n A 1 508 PHE 508 514 514 PHE PHE A . n A 1 509 ASN 509 515 515 ASN ASN A . n A 1 510 LYS 510 516 516 LYS LYS A . n A 1 511 ASP 511 517 517 ASP ASP A . n A 1 512 ILE 512 518 518 ILE ILE A . n A 1 513 GLU 513 519 519 GLU GLU A . n A 1 514 PHE 514 520 520 PHE PHE A . n A 1 515 MET 515 521 521 MET MET A . n A 1 516 ILE 516 522 522 ILE ILE A . n A 1 517 GLY 517 523 523 GLY GLY A . n A 1 518 HIS 518 524 524 HIS HIS A . n A 1 519 LYS 519 525 525 LYS LYS A . n A 1 520 PRO 520 526 526 PRO PRO A . n A 1 521 ASN 521 527 527 ASN ASN A . n A 1 522 ILE 522 528 528 ILE ILE A . n A 1 523 PHE 523 529 529 PHE PHE A . n A 1 524 TRP 524 530 530 TRP TRP A . n A 1 525 GLN 525 531 531 GLN GLN A . n A 1 526 VAL 526 532 532 VAL VAL A . n A 1 527 THR 527 533 533 THR THR A . n A 1 528 TRP 528 534 534 TRP TRP A . n A 1 529 ARG 529 535 535 ARG ARG A . n A 1 530 VAL 530 536 536 VAL VAL A . n A 1 531 VAL 531 537 537 VAL VAL A . n A 1 532 SER 532 538 538 SER SER A . n A 1 533 PRO 533 539 539 PRO PRO A . n A 1 534 LEU 534 540 540 LEU LEU A . n A 1 535 LEU 535 541 541 LEU LEU A . n A 1 536 LEU 536 542 542 LEU LEU A . n A 1 537 LEU 537 543 543 LEU LEU A . n A 1 538 ILE 538 544 544 ILE ILE A . n A 1 539 ILE 539 545 545 ILE ILE A . n A 1 540 PHE 540 546 546 PHE PHE A . n A 1 541 LEU 541 547 547 LEU LEU A . n A 1 542 PHE 542 548 548 PHE PHE A . n A 1 543 PHE 543 549 549 PHE PHE A . n A 1 544 PHE 544 550 550 PHE PHE A . n A 1 545 VAL 545 551 551 VAL VAL A . n A 1 546 VAL 546 552 552 VAL VAL A . n A 1 547 GLU 547 553 553 GLU GLU A . n A 1 548 VAL 548 554 554 VAL VAL A . n A 1 549 SER 549 555 555 SER SER A . n A 1 550 GLN 550 556 556 GLN GLN A . n A 1 551 GLU 551 557 557 GLU GLU A . n A 1 552 LEU 552 558 558 LEU LEU A . n A 1 553 THR 553 559 559 THR THR A . n A 1 554 TYR 554 560 560 TYR TYR A . n A 1 555 SER 555 561 561 SER SER A . n A 1 556 ILE 556 562 562 ILE ILE A . n A 1 557 TRP 557 563 563 TRP TRP A . n A 1 558 ASP 558 564 564 ASP ASP A . n A 1 559 PRO 559 565 565 PRO PRO A . n A 1 560 GLY 560 566 566 GLY GLY A . n A 1 561 TYR 561 567 567 TYR TYR A . n A 1 562 GLU 562 568 568 GLU GLU A . n A 1 563 GLU 563 569 569 GLU GLU A . n A 1 564 PHE 564 570 570 PHE PHE A . n A 1 565 PRO 565 571 571 PRO PRO A . n A 1 566 LYS 566 572 572 LYS LYS A . n A 1 567 SER 567 573 573 SER SER A . n A 1 568 GLN 568 574 574 GLN GLN A . n A 1 569 LYS 569 575 575 LYS LYS A . n A 1 570 ILE 570 576 576 ILE ILE A . n A 1 571 SER 571 577 577 SER SER A . n A 1 572 TYR 572 578 578 TYR TYR A . n A 1 573 PRO 573 579 579 PRO PRO A . n A 1 574 ASN 574 580 580 ASN ASN A . n A 1 575 TRP 575 581 581 TRP TRP A . n A 1 576 VAL 576 582 582 VAL VAL A . n A 1 577 TYR 577 583 583 TYR TYR A . n A 1 578 VAL 578 584 584 VAL VAL A . n A 1 579 VAL 579 585 585 VAL VAL A . n A 1 580 VAL 580 586 586 VAL VAL A . n A 1 581 VAL 581 587 587 VAL VAL A . n A 1 582 ILE 582 588 588 ILE ILE A . n A 1 583 VAL 583 589 589 VAL VAL A . n A 1 584 ALA 584 590 590 ALA ALA A . n A 1 585 GLY 585 591 591 GLY GLY A . n A 1 586 VAL 586 592 592 VAL VAL A . n A 1 587 PRO 587 593 593 PRO PRO A . n A 1 588 SER 588 594 594 SER SER A . n A 1 589 LEU 589 595 595 LEU LEU A . n A 1 590 THR 590 596 596 THR THR A . n A 1 591 ILE 591 597 597 ILE ILE A . n A 1 592 PRO 592 598 598 PRO PRO A . n A 1 593 GLY 593 599 599 GLY GLY A . n A 1 594 TYR 594 600 600 TYR TYR A . n A 1 595 ALA 595 601 601 ALA ALA A . n A 1 596 ILE 596 602 602 ILE ILE A . n A 1 597 TYR 597 603 603 TYR TYR A . n A 1 598 LYS 598 604 604 LYS LYS A . n A 1 599 LEU 599 605 605 LEU LEU A . n A 1 600 ILE 600 606 606 ILE ILE A . n A 1 601 ARG 601 607 607 ARG ARG A . n A 1 602 ASN 602 608 608 ASN ASN A . n A 1 603 HIS 603 609 609 HIS HIS A . n A 1 604 ALA 604 610 ? ? ? A . n A 1 605 GLN 605 611 ? ? ? A . n A 1 606 LYS 606 612 ? ? ? A . n A 1 607 PRO 607 613 ? ? ? A . n A 1 608 GLY 608 614 ? ? ? A . n A 1 609 ASP 609 615 ? ? ? A . n A 1 610 HIS 610 616 ? ? ? A . n A 1 611 GLN 611 617 ? ? ? A . n A 1 612 GLY 612 618 ? ? ? A . n A 1 613 LEU 613 619 ? ? ? A . n A 1 614 VAL 614 620 ? ? ? A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 B NAG 1 n B 2 NAG 2 B NAG 2 B NAG 2 n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9KXX _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9KXX _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9KXX _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 88.110 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.789 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9KXX _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.77 _refine.ls_d_res_low 2.77 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 78825 _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.00 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.42021 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.42021 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'PARAMETERS FOR MASK CACLULATION' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.277 _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B 3.816 _refine.overall_SU_ML 0.079 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high . _refine_hist.d_res_low . _refine_hist.number_atoms_solvent ? _refine_hist.number_atoms_total 4284 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein ? _refine_hist.pdbx_number_atoms_nucleic_acid ? _refine_hist.pdbx_number_atoms_ligand ? _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.006 0.013 4414 ? r_bond_refined_d ? ? 'ELECTRON MICROSCOPY' ? 0.035 0.017 4182 ? r_bond_other_d ? ? 'ELECTRON MICROSCOPY' ? 1.251 1.630 6034 ? r_angle_refined_deg ? ? 'ELECTRON MICROSCOPY' ? 1.817 1.565 9600 ? r_angle_other_deg ? ? 'ELECTRON MICROSCOPY' ? 3.770 5.000 533 ? r_dihedral_angle_1_deg ? ? 'ELECTRON MICROSCOPY' ? 34.518 22.324 185 ? r_dihedral_angle_2_deg ? ? 'ELECTRON MICROSCOPY' ? 15.198 15.000 685 ? r_dihedral_angle_3_deg ? ? 'ELECTRON MICROSCOPY' ? 18.461 15.000 14 ? r_dihedral_angle_4_deg ? ? 'ELECTRON MICROSCOPY' ? 0.057 0.200 582 ? r_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.005 0.020 4872 ? r_gen_planes_refined ? ? 'ELECTRON MICROSCOPY' ? 0.005 0.020 1055 ? r_gen_planes_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbd_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbtor_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbtor_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_metal_ion_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_metal_ion_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_vdw_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_hbond_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'ELECTRON MICROSCOPY' ? 1.723 9.407 2141 ? r_mcbond_it ? ? 'ELECTRON MICROSCOPY' ? 1.723 9.404 2140 ? r_mcbond_other ? ? 'ELECTRON MICROSCOPY' ? 3.279 14.095 2671 ? r_mcangle_it ? ? 'ELECTRON MICROSCOPY' ? 3.279 14.099 2672 ? r_mcangle_other ? ? 'ELECTRON MICROSCOPY' ? 1.470 9.505 2273 ? r_scbond_it ? ? 'ELECTRON MICROSCOPY' ? 1.470 9.502 2274 ? r_scbond_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_scangle_it ? ? 'ELECTRON MICROSCOPY' ? 2.641 14.194 3364 ? r_scangle_other ? ? 'ELECTRON MICROSCOPY' ? 11.542 ? 19642 ? r_long_range_B_refined ? ? 'ELECTRON MICROSCOPY' ? 11.542 ? 19643 ? r_long_range_B_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_rigid_bond_restr ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_sphericity_free ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.565 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 0 _refine_ls_shell.number_reflns_R_work 5800 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.815 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.000 # _struct.entry_id 9KXX _struct.title 'Inward-open Structure of human B0AT1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9KXX _struct_keywords.text 'amino acid transporter, SLC6, TRANSPORT PROTEIN' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code S6A19_HUMAN _struct_ref.pdbx_db_accession Q695T7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NPGLDARIPSLAELETIEQEEASSRPKWDNKAQYMLTCLGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVLEGIPLLY LEFAIGQRLRRGSLGVWSSIHPALKGLGLASMLTSFMVGLYYNTIISWIMWYLFNSFQEPLPWSDCPLNENQTGYVDECA RSSPVDYFWYRETLNISTSISDSGSIQWWMLLCLACAWSVLYMCTIRGIETTGKAVYITSTLPYVVLTIFLIRGLTLKGA TNGIVFLFTPNVTELAQPDTWLDAGAQVFFSFSLAFGGLISFSSYNSVHNNCEKDSVIVSIINGFTSVYVAIVVYSVIGF RATQRYDDCFSTNILTLINGFDLPEGNVTQENFVDMQQRCNASDPAAYAQLVFQTCDINAFLSEAVEGTGLAFIVFTEAI TKMPLSPLWSVLFFIMLFCLGLSSMFGNMEGVVVPLQDLRVIPPKWPKEVLTGLICLGTFLIGFIFTLNSGQYWLSLLDS YAGSIPLLIIAFCEMFSVVYVYGVDRFNKDIEFMIGHKPNIFWQVTWRVVSPLLMLIIFLFFFVVEVSQELTYSIWDPGY EEFPKSQKISYPNWVYVVVVIVAGVPSLTIPGYAIYKLIRNHCQKPGDHQGLV ; _struct_ref.pdbx_align_begin 8 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9KXX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 614 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q695T7 _struct_ref_seq.db_align_beg 8 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 620 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 620 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9KXX MET A 1 ? UNP Q695T7 ? ? 'initiating methionine' 7 1 1 9KXX LEU A 75 ? UNP Q695T7 GLU 81 conflict 81 2 1 9KXX ILE A 108 ? UNP Q695T7 LEU 114 conflict 114 3 1 9KXX ALA A 284 ? UNP Q695T7 SER 290 conflict 290 4 1 9KXX LEU A 465 ? UNP Q695T7 PHE 471 conflict 471 5 1 9KXX ALA A 494 ? UNP Q695T7 CYS 500 conflict 500 6 1 9KXX TRP A 501 ? UNP Q695T7 TYR 507 conflict 507 7 1 9KXX LEU A 536 ? UNP Q695T7 MET 542 conflict 542 8 1 9KXX ALA A 604 ? UNP Q695T7 CYS 610 conflict 610 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 11 ? GLU A 19 ? SER A 17 GLU A 25 1 ? 9 HELX_P HELX_P2 AA2 GLN A 34 ? PHE A 42 ? GLN A 40 PHE A 48 1 ? 9 HELX_P HELX_P3 AA3 GLY A 45 ? TRP A 50 ? GLY A 51 TRP A 56 1 ? 6 HELX_P HELX_P4 AA4 TRP A 50 ? SER A 58 ? TRP A 56 SER A 64 1 ? 9 HELX_P HELX_P5 AA5 GLY A 61 ? LEU A 75 ? GLY A 67 LEU A 81 1 ? 15 HELX_P HELX_P6 AA6 LEU A 75 ? ARG A 91 ? LEU A 81 ARG A 97 1 ? 17 HELX_P HELX_P7 AA7 GLY A 93 ? HIS A 102 ? GLY A 99 HIS A 108 1 ? 10 HELX_P HELX_P8 AA8 PRO A 103 ? LEU A 105 ? PRO A 109 LEU A 111 5 ? 3 HELX_P HELX_P9 AA9 LYS A 106 ? ASN A 136 ? LYS A 112 ASN A 142 1 ? 31 HELX_P HELX_P10 AB1 VAL A 157 ? SER A 163 ? VAL A 163 SER A 169 1 ? 7 HELX_P HELX_P11 AB2 SER A 164 ? ARG A 172 ? SER A 170 ARG A 178 1 ? 9 HELX_P HELX_P12 AB3 GLN A 188 ? ARG A 208 ? GLN A 194 ARG A 214 1 ? 21 HELX_P HELX_P13 AB4 ARG A 208 ? SER A 221 ? ARG A 214 SER A 227 1 ? 14 HELX_P HELX_P14 AB5 THR A 222 ? THR A 237 ? THR A 228 THR A 243 1 ? 16 HELX_P HELX_P15 AB6 GLY A 240 ? LEU A 248 ? GLY A 246 LEU A 254 1 ? 9 HELX_P HELX_P16 AB7 ASN A 252 ? ALA A 257 ? ASN A 258 ALA A 263 1 ? 6 HELX_P HELX_P17 AB8 ASP A 260 ? SER A 274 ? ASP A 266 SER A 280 1 ? 15 HELX_P HELX_P18 AB9 GLY A 278 ? SER A 285 ? GLY A 284 SER A 291 1 ? 8 HELX_P HELX_P19 AC1 ASN A 292 ? CYS A 330 ? ASN A 298 CYS A 336 1 ? 39 HELX_P HELX_P20 AC2 ILE A 379 ? GLU A 385 ? ILE A 385 GLU A 391 1 ? 7 HELX_P HELX_P21 AC3 GLY A 391 ? LYS A 403 ? GLY A 397 LYS A 409 1 ? 13 HELX_P HELX_P22 AC4 LEU A 406 ? ARG A 441 ? LEU A 412 ARG A 447 1 ? 36 HELX_P HELX_P23 AC5 PRO A 448 ? LEU A 469 ? PRO A 454 LEU A 475 1 ? 22 HELX_P HELX_P24 AC6 SER A 471 ? GLY A 484 ? SER A 477 GLY A 490 1 ? 14 HELX_P HELX_P25 AC7 SER A 485 ? VAL A 502 ? SER A 491 VAL A 508 1 ? 18 HELX_P HELX_P26 AC8 GLY A 504 ? GLY A 517 ? GLY A 510 GLY A 523 1 ? 14 HELX_P HELX_P27 AC9 ASN A 521 ? VAL A 530 ? ASN A 527 VAL A 536 1 ? 10 HELX_P HELX_P28 AD1 VAL A 530 ? VAL A 548 ? VAL A 536 VAL A 554 1 ? 19 HELX_P HELX_P29 AD2 TRP A 575 ? ALA A 584 ? TRP A 581 ALA A 590 1 ? 10 HELX_P HELX_P30 AD3 GLY A 585 ? ASN A 602 ? GLY A 591 ASN A 608 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 147 SG ? ? ? 1_555 A CYS 160 SG ? ? A CYS 153 A CYS 166 1_555 ? ? ? ? ? ? ? 2.042 ? ? covale1 covale one ? A ASN 252 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 258 B NAG 1 1_555 ? ? ? ? ? ? ? 1.438 ? N-Glycosylation covale2 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.441 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG B . ? ASN A 252 ? NAG B 1 ? 1_555 ASN A 258 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 CYS A 147 ? CYS A 160 ? CYS A 153 ? 1_555 CYS A 166 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 553 ? ILE A 556 ? THR A 559 ILE A 562 AA1 2 GLN A 568 ? SER A 571 ? GLN A 574 SER A 577 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id TYR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 554 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id TYR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 560 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ILE _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 570 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 576 # _pdbx_entry_details.entry_id 9KXX _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 159 ? ? 38.06 42.98 2 1 THR A 180 ? ? -100.29 -63.36 3 1 SER A 184 ? ? -78.49 -141.80 4 1 SER A 192 ? ? -113.91 -168.37 5 1 ARG A 214 ? ? -130.58 -47.21 6 1 TRP A 453 ? ? -38.34 110.86 7 1 TYR A 488 ? ? -125.87 -56.25 8 1 SER A 491 ? ? -144.38 -100.84 9 1 VAL A 508 ? ? -91.05 -61.87 10 1 VAL A 536 ? ? -123.34 -74.53 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9KXX _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9KXX _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.77 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 125620 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Binary complex of B0AT1 and antibody' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9KXX _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 1600 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 9KXX _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9KXX _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 7 ? A MET 1 2 1 Y 1 A ASN 8 ? A ASN 2 3 1 Y 1 A PRO 9 ? A PRO 3 4 1 Y 1 A GLY 10 ? A GLY 4 5 1 Y 1 A LEU 11 ? A LEU 5 6 1 Y 1 A ASP 12 ? A ASP 6 7 1 Y 1 A ALA 13 ? A ALA 7 8 1 Y 1 A ARG 14 ? A ARG 8 9 1 Y 1 A GLU 27 ? A GLU 21 10 1 Y 1 A GLU 28 ? A GLU 22 11 1 Y 1 A ALA 29 ? A ALA 23 12 1 Y 1 A SER 30 ? A SER 24 13 1 Y 1 A SER 31 ? A SER 25 14 1 Y 1 A ARG 32 ? A ARG 26 15 1 Y 1 A PRO 33 ? A PRO 27 16 1 Y 1 A LYS 34 ? A LYS 28 17 1 Y 1 A TRP 35 ? A TRP 29 18 1 Y 1 A ASP 36 ? A ASP 30 19 1 Y 1 A ASN 37 ? A ASN 31 20 1 Y 1 A LYS 38 ? A LYS 32 21 1 Y 1 A PHE 337 ? A PHE 331 22 1 Y 1 A SER 338 ? A SER 332 23 1 Y 1 A THR 339 ? A THR 333 24 1 Y 1 A ASN 340 ? A ASN 334 25 1 Y 1 A ILE 341 ? A ILE 335 26 1 Y 1 A LEU 342 ? A LEU 336 27 1 Y 1 A THR 343 ? A THR 337 28 1 Y 1 A LEU 344 ? A LEU 338 29 1 Y 1 A ILE 345 ? A ILE 339 30 1 Y 1 A ASN 346 ? A ASN 340 31 1 Y 1 A GLY 347 ? A GLY 341 32 1 Y 1 A PHE 348 ? A PHE 342 33 1 Y 1 A ASP 349 ? A ASP 343 34 1 Y 1 A LEU 350 ? A LEU 344 35 1 Y 1 A PRO 351 ? A PRO 345 36 1 Y 1 A GLU 352 ? A GLU 346 37 1 Y 1 A GLY 353 ? A GLY 347 38 1 Y 1 A ASN 354 ? A ASN 348 39 1 Y 1 A VAL 355 ? A VAL 349 40 1 Y 1 A THR 356 ? A THR 350 41 1 Y 1 A GLN 357 ? A GLN 351 42 1 Y 1 A GLU 358 ? A GLU 352 43 1 Y 1 A ASN 359 ? A ASN 353 44 1 Y 1 A PHE 360 ? A PHE 354 45 1 Y 1 A VAL 361 ? A VAL 355 46 1 Y 1 A ASP 362 ? A ASP 356 47 1 Y 1 A MET 363 ? A MET 357 48 1 Y 1 A GLN 364 ? A GLN 358 49 1 Y 1 A GLN 365 ? A GLN 359 50 1 Y 1 A ARG 366 ? A ARG 360 51 1 Y 1 A CYS 367 ? A CYS 361 52 1 Y 1 A ASN 368 ? A ASN 362 53 1 Y 1 A ALA 369 ? A ALA 363 54 1 Y 1 A SER 370 ? A SER 364 55 1 Y 1 A ASP 371 ? A ASP 365 56 1 Y 1 A PRO 372 ? A PRO 366 57 1 Y 1 A ALA 373 ? A ALA 367 58 1 Y 1 A ALA 374 ? A ALA 368 59 1 Y 1 A TYR 375 ? A TYR 369 60 1 Y 1 A ALA 376 ? A ALA 370 61 1 Y 1 A GLN 377 ? A GLN 371 62 1 Y 1 A LEU 378 ? A LEU 372 63 1 Y 1 A VAL 379 ? A VAL 373 64 1 Y 1 A PHE 380 ? A PHE 374 65 1 Y 1 A GLN 381 ? A GLN 375 66 1 Y 1 A THR 382 ? A THR 376 67 1 Y 1 A CYS 383 ? A CYS 377 68 1 Y 1 A ALA 610 ? A ALA 604 69 1 Y 1 A GLN 611 ? A GLN 605 70 1 Y 1 A LYS 612 ? A LYS 606 71 1 Y 1 A PRO 613 ? A PRO 607 72 1 Y 1 A GLY 614 ? A GLY 608 73 1 Y 1 A ASP 615 ? A ASP 609 74 1 Y 1 A HIS 616 ? A HIS 610 75 1 Y 1 A GLN 617 ? A GLN 611 76 1 Y 1 A GLY 618 ? A GLY 612 77 1 Y 1 A LEU 619 ? A LEU 613 78 1 Y 1 A VAL 620 ? A VAL 614 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_admin.current_status REL _em_admin.deposition_date 2024-12-07 _em_admin.deposition_site PDBJ _em_admin.entry_id 9KXX _em_admin.last_update 2025-12-10 _em_admin.map_release_date 2025-12-10 _em_admin.title 'Inward-open Structure of human B0AT1' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.12 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 7.6 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'MODEL REFINEMENT' ? 2 ? ? ? REFMAC 5.8.0267 'IMAGE ACQUISITION' ? 3 1 1 1 ? ? MASKING ? 4 1 1 1 ? ? 'CTF CORRECTION' ? 5 1 ? ? ? ? 'LAYERLINE INDEXING' ? 6 1 1 1 ? ? 'DIFFRACTION INDEXING' ? 7 1 1 1 ? ? 'MODEL FITTING' ? 8 1 1 1 ? ? OTHER ? 9 1 1 1 ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n # _atom_sites.entry_id 9KXX _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #