HEADER PLANT PROTEIN 23-DEC-24 9L56 TITLE PLASTID-LOCALIZED EXONUCLEASE 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-3' EXONUCLEASE FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PLASTID-LOCALIZED EXONUCLEASE 1,DNA POLYMERASE I; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: EXPRESSION USING THE PET28A-HIS-SUMOSTAR COMPND 7 PLASMID.DELETED THE FIRST 91 AMINO ACIDS OF THE ORIGINAL SEQUENCE(THE COMPND 8 DELETED SEQUENCE WAS THE SIGNAL PEPTIDE). SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZEA MAYS; SOURCE 3 ORGANISM_TAXID: 4577; SOURCE 4 GENE: LOC100285516, ZEAMMB73_ZM00001D047988; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A-HIS-SMUOSTAR KEYWDS EXONUCLEASE, PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.SHI,Y.ZHANG REVDAT 2 06-AUG-25 9L56 1 JRNL REVDAT 1 16-JUL-25 9L56 0 JRNL AUTH X.HUANG,G.SHI,Q.XIAO,J.FENG,Y.HUANG,H.SHI,Q.WANG,Y.SU, JRNL AUTH 2 J.WANG,X.WU,Y.CAO,H.WANG,W.WANG,Y.ZHANG,Y.WU JRNL TITL PEN1 CATALYSES RNA PRIMER REMOVAL DURING PLASTID DNA JRNL TITL 2 REPLICATION IN MAIZE. JRNL REF NAT.PLANTS V. 11 1325 2025 JRNL REFN ESSN 2055-0278 JRNL PMID 40562815 JRNL DOI 10.1038/S41477-025-02027-4 REMARK 2 REMARK 2 RESOLUTION. 2.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21_5207 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 33819 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1651 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.1800 - 5.5400 0.99 2835 147 0.2112 0.2299 REMARK 3 2 5.5400 - 4.4000 1.00 2752 121 0.1934 0.2236 REMARK 3 3 4.4000 - 3.8500 1.00 2701 137 0.2020 0.2095 REMARK 3 4 3.8500 - 3.4900 1.00 2699 133 0.2307 0.2760 REMARK 3 5 3.4900 - 3.2400 1.00 2675 133 0.2613 0.3081 REMARK 3 6 3.2400 - 3.0500 1.00 2649 144 0.2788 0.3290 REMARK 3 7 3.0500 - 2.9000 1.00 2671 128 0.2700 0.3459 REMARK 3 8 2.9000 - 2.7700 1.00 2661 142 0.2924 0.3627 REMARK 3 9 2.7700 - 2.6700 1.00 2644 131 0.3132 0.3280 REMARK 3 10 2.6700 - 2.5800 0.99 2628 146 0.2947 0.3237 REMARK 3 11 2.5800 - 2.4900 1.00 2643 124 0.2840 0.2753 REMARK 3 12 2.4900 - 2.4200 0.99 2610 165 0.2983 0.3327 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.637 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4884 REMARK 3 ANGLE : 0.717 6609 REMARK 3 CHIRALITY : 0.048 760 REMARK 3 PLANARITY : 0.006 839 REMARK 3 DIHEDRAL : 14.470 1809 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9L56 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 24-DEC-24. REMARK 100 THE DEPOSITION ID IS D_1300055007. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAY-24 REMARK 200 TEMPERATURE (KELVIN) : 300 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL10U2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979183 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS 1.0.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33874 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.420 REMARK 200 RESOLUTION RANGE LOW (A) : 92.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.50 REMARK 200 R MERGE (I) : 0.12900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 10.60 REMARK 200 R MERGE FOR SHELL (I) : 1.60000 REMARK 200 R SYM FOR SHELL (I) : 1.40000 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1M TRIS-HCL REMARK 280 PH 7.5, 20% W/V PEG 4000 AND SOAKED WITH 10 MM MNCL2, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.14433 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 88.28867 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 88.28867 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 44.14433 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 117 REMARK 465 GLN A 118 REMARK 465 LEU A 119 REMARK 465 GLU A 120 REMARK 465 HIS A 121 REMARK 465 ALA A 122 REMARK 465 ASP A 123 REMARK 465 GLY A 124 REMARK 465 ASN A 125 REMARK 465 TYR A 161 REMARK 465 GLY A 162 REMARK 465 HIS A 163 REMARK 465 TYR A 164 REMARK 465 THR A 165 REMARK 465 ALA A 166 REMARK 465 MET A 167 REMARK 465 PRO A 168 REMARK 465 SER A 169 REMARK 465 LYS A 170 REMARK 465 GLU A 171 REMARK 465 CYS A 172 REMARK 465 HIS A 173 REMARK 465 MET A 174 REMARK 465 ALA A 175 REMARK 465 GLY B 117 REMARK 465 GLN B 118 REMARK 465 LEU B 119 REMARK 465 GLU B 120 REMARK 465 HIS B 121 REMARK 465 ALA B 122 REMARK 465 ASP B 123 REMARK 465 TYR B 164 REMARK 465 THR B 165 REMARK 465 ALA B 166 REMARK 465 MET B 167 REMARK 465 PRO B 168 REMARK 465 SER B 169 REMARK 465 LYS B 170 REMARK 465 GLU B 171 REMARK 465 CYS B 172 REMARK 465 HIS B 173 REMARK 465 MET B 174 REMARK 465 ALA B 175 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 193 OG1 CG2 REMARK 470 LYS A 302 CG CD CE NZ REMARK 470 LYS A 381 CG CD CE NZ REMARK 470 GLU A 388 CG CD OE1 OE2 REMARK 470 LYS A 421 CG CD CE NZ REMARK 470 LYS B 109 CG CD CE NZ REMARK 470 GLN B 201 CG CD OE1 NE2 REMARK 470 LYS B 302 CG CD CE NZ REMARK 470 LYS B 343 CG CD CE NZ REMARK 470 HIS B 368 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 374 CG CD CE NZ REMARK 470 LYS B 381 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 333 49.09 -104.66 REMARK 500 ASP A 386 -153.70 67.00 REMARK 500 ASP B 98 99.38 -68.98 REMARK 500 ASN B 125 -40.02 82.38 REMARK 500 SER B 333 47.11 -104.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 226 OD2 REMARK 620 2 ASP A 249 OD2 94.3 REMARK 620 3 ASP A 251 OD2 87.4 100.5 REMARK 620 4 HOH A 603 O 85.8 178.9 78.4 REMARK 620 5 HOH A 623 O 171.0 80.1 100.5 99.9 REMARK 620 6 HOH A 635 O 97.8 78.6 174.7 102.6 74.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 251 OD1 REMARK 620 2 ASP A 251 OD2 52.2 REMARK 620 3 ASP A 301 OD2 106.1 158.3 REMARK 620 4 ASP A 304 OD2 140.2 88.2 113.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 226 OD2 REMARK 620 2 ASP B 249 OD2 99.4 REMARK 620 3 ASP B 251 OD2 83.9 92.7 REMARK 620 4 HOH B 601 O 86.2 169.1 78.5 REMARK 620 5 HOH B 624 O 173.7 77.3 90.8 96.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 251 OD1 REMARK 620 2 ASP B 251 OD2 55.1 REMARK 620 3 ASP B 301 OD2 113.4 164.6 REMARK 620 4 ASP B 304 OD2 149.5 95.0 97.1 REMARK 620 N 1 2 3 DBREF 9L56 A 92 422 UNP B4FJZ1 B4FJZ1_MAIZE 92 422 DBREF 9L56 B 92 422 UNP B4FJZ1 B4FJZ1_MAIZE 92 422 SEQRES 1 A 331 SER ARG ILE MET LEU VAL ASP GLY THR SER MET MET TYR SEQRES 2 A 331 ARG SER TYR TYR LYS ILE LEU ALA GLN LEU GLN HIS GLY SEQRES 3 A 331 GLN LEU GLU HIS ALA ASP GLY ASN GLY ASP TRP VAL LEU SEQRES 4 A 331 THR ILE PHE LYS ALA LEU SER LEU LEU LEU ASP MET LEU SEQRES 5 A 331 GLU PHE ILE PRO SER HIS ALA ALA VAL VAL PHE ASP HIS SEQRES 6 A 331 ASP GLY VAL PRO TYR GLY HIS TYR THR ALA MET PRO SER SEQRES 7 A 331 LYS GLU CYS HIS MET ALA LYS GLY MET THR PHE ARG HIS SEQRES 8 A 331 MET LEU TYR PRO ALA TYR LYS SER ASN ARG THR PRO THR SEQRES 9 A 331 PRO ASP THR VAL VAL GLN GLY MET GLN TYR LEU LYS ALA SEQRES 10 A 331 SER ILE LYS ALA MET SER ILE LYS VAL ILE GLU VAL PRO SEQRES 11 A 331 GLY VAL GLU ALA ASP ASP VAL ILE GLY THR LEU ALA ILE SEQRES 12 A 331 ASN SER VAL SER ALA GLY TYR LYS VAL ARG ILE VAL SER SEQRES 13 A 331 PRO ASP LYS ASP PHE PHE GLN ILE LEU SER PRO SER LEU SEQRES 14 A 331 ARG LEU LEU ARG ILE ALA PRO ARG GLY SER GLY MET VAL SEQRES 15 A 331 SER PHE GLY VAL GLU ASP PHE VAL LYS ARG TYR GLY PRO SEQRES 16 A 331 LEU LYS PRO SER GLN PHE VAL ASP VAL VAL ALA LEU SER SEQRES 17 A 331 GLY ASP LYS ALA ASP ASN ILE PRO GLY VAL GLU GLY ILE SEQRES 18 A 331 GLY ASP ILE ASN ALA VAL LYS LEU ILE SER LYS PHE GLY SEQRES 19 A 331 SER LEU ASP ASN LEU LEU LYS SER VAL ASP GLU VAL GLU SEQRES 20 A 331 ASP GLU ARG ILE LYS GLN ALA LEU ILE SER HIS SER GLU SEQRES 21 A 331 GLN ALA ILE LEU CYS LYS ASN LEU ALA THR LEU ARG SER SEQRES 22 A 331 ASP LEU PRO HIS TYR MET VAL PRO PHE LYS THR ALA ASP SEQRES 23 A 331 LEU VAL PHE LYS LYS PRO GLN ASP ASP GLY GLU LYS PHE SEQRES 24 A 331 ILE LYS LEU LEU ARG ALA LEU GLU ALA TYR ALA GLU GLY SEQRES 25 A 331 SER SER VAL ASN PRO ILE ILE ARG ARG ALA ALA TYR LEU SEQRES 26 A 331 TRP ASN LYS LEU LYS SER SEQRES 1 B 331 SER ARG ILE MET LEU VAL ASP GLY THR SER MET MET TYR SEQRES 2 B 331 ARG SER TYR TYR LYS ILE LEU ALA GLN LEU GLN HIS GLY SEQRES 3 B 331 GLN LEU GLU HIS ALA ASP GLY ASN GLY ASP TRP VAL LEU SEQRES 4 B 331 THR ILE PHE LYS ALA LEU SER LEU LEU LEU ASP MET LEU SEQRES 5 B 331 GLU PHE ILE PRO SER HIS ALA ALA VAL VAL PHE ASP HIS SEQRES 6 B 331 ASP GLY VAL PRO TYR GLY HIS TYR THR ALA MET PRO SER SEQRES 7 B 331 LYS GLU CYS HIS MET ALA LYS GLY MET THR PHE ARG HIS SEQRES 8 B 331 MET LEU TYR PRO ALA TYR LYS SER ASN ARG THR PRO THR SEQRES 9 B 331 PRO ASP THR VAL VAL GLN GLY MET GLN TYR LEU LYS ALA SEQRES 10 B 331 SER ILE LYS ALA MET SER ILE LYS VAL ILE GLU VAL PRO SEQRES 11 B 331 GLY VAL GLU ALA ASP ASP VAL ILE GLY THR LEU ALA ILE SEQRES 12 B 331 ASN SER VAL SER ALA GLY TYR LYS VAL ARG ILE VAL SER SEQRES 13 B 331 PRO ASP LYS ASP PHE PHE GLN ILE LEU SER PRO SER LEU SEQRES 14 B 331 ARG LEU LEU ARG ILE ALA PRO ARG GLY SER GLY MET VAL SEQRES 15 B 331 SER PHE GLY VAL GLU ASP PHE VAL LYS ARG TYR GLY PRO SEQRES 16 B 331 LEU LYS PRO SER GLN PHE VAL ASP VAL VAL ALA LEU SER SEQRES 17 B 331 GLY ASP LYS ALA ASP ASN ILE PRO GLY VAL GLU GLY ILE SEQRES 18 B 331 GLY ASP ILE ASN ALA VAL LYS LEU ILE SER LYS PHE GLY SEQRES 19 B 331 SER LEU ASP ASN LEU LEU LYS SER VAL ASP GLU VAL GLU SEQRES 20 B 331 ASP GLU ARG ILE LYS GLN ALA LEU ILE SER HIS SER GLU SEQRES 21 B 331 GLN ALA ILE LEU CYS LYS ASN LEU ALA THR LEU ARG SER SEQRES 22 B 331 ASP LEU PRO HIS TYR MET VAL PRO PHE LYS THR ALA ASP SEQRES 23 B 331 LEU VAL PHE LYS LYS PRO GLN ASP ASP GLY GLU LYS PHE SEQRES 24 B 331 ILE LYS LEU LEU ARG ALA LEU GLU ALA TYR ALA GLU GLY SEQRES 25 B 331 SER SER VAL ASN PRO ILE ILE ARG ARG ALA ALA TYR LEU SEQRES 26 B 331 TRP ASN LYS LEU LYS SER HET MN A 501 1 HET MN A 502 1 HET MN B 501 1 HET MN B 502 1 HETNAM MN MANGANESE (II) ION FORMUL 3 MN 4(MN 2+) FORMUL 7 HOH *104(H2 O) HELIX 1 AA1 GLY A 99 HIS A 116 1 18 HELIX 2 AA2 ASP A 127 GLU A 144 1 18 HELIX 3 AA3 THR A 179 TYR A 185 1 7 HELIX 4 AA4 PRO A 196 MET A 213 1 18 HELIX 5 AA5 GLU A 224 ALA A 239 1 16 HELIX 6 AA6 ASP A 249 LEU A 256 5 8 HELIX 7 AA7 GLY A 276 GLY A 285 1 10 HELIX 8 AA8 LYS A 288 SER A 290 5 3 HELIX 9 AA9 GLN A 291 GLY A 300 1 10 HELIX 10 AB1 ASP A 301 ASN A 305 5 5 HELIX 11 AB2 GLY A 313 GLY A 325 1 13 HELIX 12 AB3 SER A 326 SER A 333 1 8 HELIX 13 AB4 VAL A 334 VAL A 337 5 4 HELIX 14 AB5 ASP A 339 HIS A 349 1 11 HELIX 15 AB6 HIS A 349 THR A 361 1 13 HELIX 16 AB7 LYS A 374 VAL A 379 5 6 HELIX 17 AB8 GLY A 387 ALA A 399 1 13 HELIX 18 AB9 VAL A 406 LEU A 420 1 15 HELIX 19 AC1 GLY B 99 HIS B 116 1 18 HELIX 20 AC2 ASN B 125 GLU B 144 1 20 HELIX 21 AC3 THR B 179 TYR B 185 1 7 HELIX 22 AC4 PRO B 196 MET B 213 1 18 HELIX 23 AC5 GLU B 224 ALA B 239 1 16 HELIX 24 AC6 ASP B 249 LEU B 256 5 8 HELIX 25 AC7 GLY B 276 GLY B 285 1 10 HELIX 26 AC8 LYS B 288 GLY B 300 1 13 HELIX 27 AC9 ASP B 301 ASN B 305 5 5 HELIX 28 AD1 GLY B 313 GLY B 325 1 13 HELIX 29 AD2 SER B 326 SER B 333 1 8 HELIX 30 AD3 VAL B 334 VAL B 337 5 4 HELIX 31 AD4 ASP B 339 HIS B 349 1 11 HELIX 32 AD5 HIS B 349 THR B 361 1 13 HELIX 33 AD6 LYS B 374 VAL B 379 5 6 HELIX 34 AD7 GLY B 387 ALA B 399 1 13 HELIX 35 AD8 VAL B 406 ASN B 418 1 13 SHEET 1 AA1 6 LYS A 216 ILE A 218 0 SHEET 2 AA1 6 HIS A 149 VAL A 153 1 N VAL A 152 O LYS A 216 SHEET 3 AA1 6 ARG A 93 ASP A 98 1 N VAL A 97 O ALA A 151 SHEET 4 AA1 6 LYS A 242 VAL A 246 1 O ARG A 244 N ILE A 94 SHEET 5 AA1 6 LEU A 260 ILE A 265 1 O ARG A 261 N VAL A 243 SHEET 6 AA1 6 MET A 272 PHE A 275 -1 O PHE A 275 N LEU A 262 SHEET 1 AA2 6 LYS B 216 ILE B 218 0 SHEET 2 AA2 6 HIS B 149 VAL B 153 1 N VAL B 152 O LYS B 216 SHEET 3 AA2 6 ARG B 93 ASP B 98 1 N VAL B 97 O ALA B 151 SHEET 4 AA2 6 LYS B 242 VAL B 246 1 O ARG B 244 N ILE B 94 SHEET 5 AA2 6 LEU B 260 ILE B 265 1 O ARG B 261 N ILE B 245 SHEET 6 AA2 6 MET B 272 PHE B 275 -1 O PHE B 275 N LEU B 262 LINK OD2 ASP A 226 MN MN A 502 1555 1555 2.15 LINK OD2 ASP A 249 MN MN A 502 1555 1555 2.13 LINK OD1 ASP A 251 MN MN A 501 1555 1555 2.31 LINK OD2 ASP A 251 MN MN A 501 1555 1555 2.64 LINK OD2 ASP A 251 MN MN A 502 1555 1555 2.23 LINK OD2 ASP A 301 MN MN A 501 1555 1555 2.13 LINK OD2 ASP A 304 MN MN A 501 1555 1555 2.20 LINK MN MN A 502 O HOH A 603 1555 1555 2.26 LINK MN MN A 502 O HOH A 623 1555 1555 2.37 LINK MN MN A 502 O HOH A 635 1555 1555 2.79 LINK OD2 ASP B 226 MN MN B 502 1555 1555 2.11 LINK OD2 ASP B 249 MN MN B 502 1555 1555 2.14 LINK OD1 ASP B 251 MN MN B 501 1555 1555 2.21 LINK OD2 ASP B 251 MN MN B 501 1555 1555 2.51 LINK OD2 ASP B 251 MN MN B 502 1555 1555 2.28 LINK OD2 ASP B 301 MN MN B 501 1555 1555 2.18 LINK OD2 ASP B 304 MN MN B 501 1555 1555 2.17 LINK MN MN B 502 O HOH B 601 1555 1555 2.49 LINK MN MN B 502 O HOH B 624 1555 1555 2.41 CRYST1 107.147 107.147 132.433 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009333 0.005388 0.000000 0.00000 SCALE2 0.000000 0.010777 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007551 0.00000 TER 4809 SER A 422 TER 9649 SER B 422 HETATM 9650 MN MN A 501 -44.837 45.368 -24.731 1.00 73.70 MN HETATM 9651 MN MN A 502 -45.059 41.257 -25.145 1.00 54.16 MN HETATM 9652 MN MN B 501 -18.848 21.078 -17.215 1.00 72.17 MN HETATM 9653 MN MN B 502 -19.713 24.574 -15.254 1.00 67.48 MN HETATM 9654 O HOH A 601 -50.499 17.249 -35.150 1.00 74.69 O HETATM 9655 O HOH A 602 -46.736 32.727 -25.459 1.00 59.29 O HETATM 9656 O HOH A 603 -43.253 41.771 -23.891 1.00 55.37 O HETATM 9657 O HOH A 604 -51.191 11.530 -29.873 1.00 76.11 O HETATM 9658 O HOH A 605 -29.605 24.240 -26.884 1.00 57.68 O HETATM 9659 O HOH A 606 -50.422 41.141 -32.274 1.00 52.24 O HETATM 9660 O HOH A 607 -39.822 32.168 -22.456 1.00 54.60 O HETATM 9661 O HOH A 608 -47.129 11.064 -30.463 1.00 87.49 O HETATM 9662 O HOH A 609 -61.087 19.612 -37.311 1.00 68.01 O HETATM 9663 O HOH A 610 -46.330 30.387 -20.844 1.00 65.48 O HETATM 9664 O HOH A 611 -46.854 37.971 -26.054 1.00 54.90 O HETATM 9665 O HOH A 612 -32.741 35.584 -36.650 1.00 67.80 O HETATM 9666 O HOH A 613 -41.032 40.423 -46.711 1.00 66.99 O HETATM 9667 O HOH A 614 -54.337 36.597 -31.443 1.00 54.63 O HETATM 9668 O HOH A 615 -52.426 33.132 -29.399 1.00 54.05 O HETATM 9669 O HOH A 616 -54.839 47.597 -31.194 1.00 48.02 O HETATM 9670 O HOH A 617 -55.882 36.009 -27.829 1.00 55.59 O HETATM 9671 O HOH A 618 -37.299 32.712 -18.008 1.00 64.16 O HETATM 9672 O HOH A 619 -39.079 49.073 -34.310 1.00 64.70 O HETATM 9673 O HOH A 620 -45.363 11.851 -34.316 1.00 82.40 O HETATM 9674 O HOH A 621 -34.562 44.034 -25.281 1.00 49.13 O HETATM 9675 O HOH A 622 -30.655 33.660 -35.074 1.00 69.98 O HETATM 9676 O HOH A 623 -46.781 42.071 -23.735 1.00 53.80 O HETATM 9677 O HOH A 624 -39.443 48.394 -41.264 1.00 71.66 O HETATM 9678 O HOH A 625 -31.369 42.530 -31.338 1.00 68.96 O HETATM 9679 O HOH A 626 -36.562 47.823 -43.314 1.00105.20 O HETATM 9680 O HOH A 627 -36.407 42.869 -34.271 1.00 63.61 O HETATM 9681 O HOH A 628 -40.000 31.113 -24.707 1.00 53.77 O HETATM 9682 O HOH A 629 -44.057 37.216 -24.094 1.00 67.76 O HETATM 9683 O HOH A 630 -49.573 41.804 -23.387 1.00 72.31 O HETATM 9684 O HOH A 631 -40.056 33.858 -19.131 1.00 68.09 O HETATM 9685 O HOH A 632 -46.587 36.411 -24.319 1.00 59.38 O HETATM 9686 O HOH A 633 -64.038 21.378 -29.751 1.00 65.16 O HETATM 9687 O HOH A 634 -32.895 31.518 -42.277 1.00 74.23 O HETATM 9688 O HOH A 635 -46.088 39.019 -23.838 1.00 52.56 O HETATM 9689 O HOH A 636 -41.162 42.498 -26.265 1.00 55.95 O HETATM 9690 O HOH A 637 -63.879 26.869 -29.956 1.00 75.52 O HETATM 9691 O HOH A 638 -30.258 47.205 -29.723 1.00 65.78 O HETATM 9692 O HOH A 639 -47.707 6.376 -27.656 1.00 83.64 O HETATM 9693 O HOH A 640 -54.603 34.272 -29.380 1.00 60.91 O HETATM 9694 O HOH A 641 -33.533 66.148 -38.549 1.00 90.19 O HETATM 9695 O HOH A 642 -42.374 22.745 -22.769 1.00 71.94 O HETATM 9696 O HOH A 643 -39.072 44.213 -40.579 1.00 61.46 O HETATM 9697 O HOH A 644 -47.451 52.570 -29.469 1.00 72.93 O HETATM 9698 O HOH A 645 -50.176 15.602 -10.291 1.00 93.82 O HETATM 9699 O HOH A 646 -40.121 22.715 -24.414 1.00 69.21 O HETATM 9700 O HOH A 647 -55.661 39.189 -45.668 1.00 77.98 O HETATM 9701 O HOH A 648 -52.542 58.621 -38.613 1.00 79.64 O HETATM 9702 O HOH A 649 -35.561 31.474 -15.566 1.00 64.53 O HETATM 9703 O HOH A 650 -51.798 56.133 -32.800 1.00 76.00 O HETATM 9704 O HOH A 651 -43.437 77.173 -36.841 1.00 82.93 O HETATM 9705 O HOH A 652 -34.092 39.877 -40.987 1.00 73.61 O HETATM 9706 O HOH A 653 -43.831 13.562 -31.660 1.00 86.10 O HETATM 9707 O HOH A 654 -53.946 46.298 -49.865 1.00 85.54 O HETATM 9708 O HOH A 655 -67.552 22.051 -8.369 1.00 84.55 O HETATM 9709 O HOH B 601 -21.629 23.913 -16.706 1.00 62.02 O HETATM 9710 O HOH B 602 -12.380 23.719 -26.681 1.00 65.79 O HETATM 9711 O HOH B 603 -27.165 32.152 -14.881 1.00 52.68 O HETATM 9712 O HOH B 604 -15.362 47.561 -3.346 1.00 58.40 O HETATM 9713 O HOH B 605 -19.140 27.034 -12.851 1.00 56.07 O HETATM 9714 O HOH B 606 -10.924 26.437 -13.613 1.00 57.22 O HETATM 9715 O HOH B 607 -15.564 27.161 -26.985 1.00 68.50 O HETATM 9716 O HOH B 608 -9.120 34.159 -24.119 1.00 57.12 O HETATM 9717 O HOH B 609 -14.876 31.237 -7.599 1.00 56.20 O HETATM 9718 O HOH B 610 -15.897 29.685 -26.368 1.00 63.91 O HETATM 9719 O HOH B 611 -7.154 43.924 3.013 1.00 59.88 O HETATM 9720 O HOH B 612 -21.067 28.122 -11.659 1.00 57.33 O HETATM 9721 O HOH B 613 -11.065 28.738 -7.951 1.00 61.06 O HETATM 9722 O HOH B 614 -32.192 30.471 -15.521 1.00 59.25 O HETATM 9723 O HOH B 615 -24.218 24.772 -25.403 1.00 58.62 O HETATM 9724 O HOH B 616 -17.097 46.243 -9.835 1.00 49.67 O HETATM 9725 O HOH B 617 -2.718 31.590 -20.215 1.00 68.36 O HETATM 9726 O HOH B 618 -15.443 55.633 -5.232 1.00 70.79 O HETATM 9727 O HOH B 619 -17.133 24.392 -6.950 1.00 69.45 O HETATM 9728 O HOH B 620 -21.314 50.035 2.116 1.00 61.75 O HETATM 9729 O HOH B 621 -22.566 46.861 -7.805 1.00 67.62 O HETATM 9730 O HOH B 622 -12.508 53.705 -5.547 1.00 63.85 O HETATM 9731 O HOH B 623 -24.214 41.270 -29.240 1.00 71.37 O HETATM 9732 O HOH B 624 -19.640 22.535 -13.976 1.00 69.99 O HETATM 9733 O HOH B 625 -2.470 36.921 -19.153 1.00 61.62 O HETATM 9734 O HOH B 626 -25.497 34.312 -14.740 1.00 55.11 O HETATM 9735 O HOH B 627 -5.063 47.775 -10.351 1.00 51.64 O HETATM 9736 O HOH B 628 -23.950 45.119 -8.632 1.00 61.68 O HETATM 9737 O HOH B 629 -15.819 39.807 -28.963 1.00 71.19 O HETATM 9738 O HOH B 630 -11.230 36.971 -27.452 1.00 60.04 O HETATM 9739 O HOH B 631 -16.332 42.924 -21.033 1.00 68.69 O HETATM 9740 O HOH B 632 0.276 29.682 -9.135 1.00 72.62 O HETATM 9741 O HOH B 633 -22.850 23.834 -31.017 1.00 69.81 O HETATM 9742 O HOH B 634 -1.937 35.429 -11.971 1.00 73.85 O HETATM 9743 O HOH B 635 -15.824 15.395 -14.789 1.00 90.38 O HETATM 9744 O HOH B 636 -11.487 54.438 2.722 1.00 66.99 O HETATM 9745 O HOH B 637 -24.408 45.630 -24.422 1.00 75.24 O HETATM 9746 O HOH B 638 -9.270 29.175 -27.104 1.00 68.57 O HETATM 9747 O HOH B 639 -21.443 53.856 -5.020 1.00 72.55 O HETATM 9748 O HOH B 640 -20.688 25.320 -19.588 1.00 60.76 O HETATM 9749 O HOH B 641 -20.854 25.608 -12.319 1.00 67.08 O HETATM 9750 O HOH B 642 -26.248 48.294 -2.455 1.00 70.10 O HETATM 9751 O HOH B 643 -13.857 23.455 -4.955 1.00 98.82 O HETATM 9752 O HOH B 644 -21.446 48.767 -8.770 1.00 66.58 O HETATM 9753 O HOH B 645 -2.343 43.088 0.581 1.00 72.94 O HETATM 9754 O HOH B 646 -17.858 56.295 -8.048 1.00 80.76 O HETATM 9755 O HOH B 647 -18.401 54.348 8.088 1.00 72.91 O HETATM 9756 O HOH B 648 -28.765 40.583 -9.255 1.00 72.65 O HETATM 9757 O HOH B 649 -32.866 17.920 3.057 1.00 90.59 O CONECT 1761 9651 CONECT 2101 9651 CONECT 2134 9650 CONECT 2135 9650 9651 CONECT 2923 9650 CONECT 2952 9650 CONECT 6618 9653 CONECT 6958 9653 CONECT 6991 9652 CONECT 6992 9652 9653 CONECT 7780 9652 CONECT 7809 9652 CONECT 9650 2134 2135 2923 2952 CONECT 9651 1761 2101 2135 9656 CONECT 9651 9676 9688 CONECT 9652 6991 6992 7780 7809 CONECT 9653 6618 6958 6992 9709 CONECT 9653 9732 CONECT 9656 9651 CONECT 9676 9651 CONECT 9688 9651 CONECT 9709 9653 CONECT 9732 9653 MASTER 369 0 4 35 12 0 0 6 4897 2 23 52 END