data_9L8D # _entry.id 9L8D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.413 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9L8D pdb_00009l8d 10.2210/pdb9l8d/pdb WWPDB D_1300055147 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-04-29 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9L8D _pdbx_database_status.recvd_initial_deposition_date 2024-12-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email zhouw@sustech.edu.cn _pdbx_contact_author.name_first Wen _pdbx_contact_author.name_last Zhou _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7351-6057 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhu, J.' 1 ? 'Wang, L.' 2 0000-0003-4138-5122 'Lin, C.' 3 ? 'Zhou, W.' 4 0000-0001-7351-6057 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Immunity _citation.journal_id_ASTM IUNIEH _citation.journal_id_CSD 2048 _citation.journal_id_ISSN 1074-7613 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Distinct recognition pattern for double-stranded DNA allows TREX1 to maintain immune homeostasis' _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhu, J.' 1 ? primary 'Wang, L.' 2 0000-0003-4138-5122 primary 'Lin, C.' 3 ? primary 'Zhou, W.' 4 0000-0001-7351-6057 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Three-prime repair exonuclease 1' 26182.941 1 3.1.11.2 ? ? ? 2 polymer syn ;DNA (5'-D(*GP*TP*TP*GP*GP*CP*CP*CP*TP*CP*TP*TP*TP*AP*GP*GP*GP*CP*CP*AP*TP*C)-3') ; 6710.313 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 76 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SMGSQALPHGHMQTLIFLDLEATGLPYSQPKITELCLLAVHRHALENSSMSEGQPPLVPKPPRVVDKLSLCIAPGKPCSS GASEITGLTTAGLEAHGRQRFNDNLATLLQVFLQRQPQPCCLVAHNGDRYDFPLLQAELASLSVISPLDGTFCVDSIAAL KTLEQASSPSEHGPRKSYSLGSIYTRLYGQAPTDSHTAEGDVLALLSICQWKPQALLQWVDKHARPFSTIKPMYGMAATT GTA ; ;SMGSQALPHGHMQTLIFLDLEATGLPYSQPKITELCLLAVHRHALENSSMSEGQPPLVPKPPRVVDKLSLCIAPGKPCSS GASEITGLTTAGLEAHGRQRFNDNLATLLQVFLQRQPQPCCLVAHNGDRYDFPLLQAELASLSVISPLDGTFCVDSIAAL KTLEQASSPSEHGPRKSYSLGSIYTRLYGQAPTDSHTAEGDVLALLSICQWKPQALLQWVDKHARPFSTIKPMYGMAATT GTA ; A ? 2 polydeoxyribonucleotide no no ;(DG)(DT)(DT)(DG)(DG)(DC)(DC)(DC)(DT)(DC)(DT)(DT)(DT)(DA)(DG)(DG)(DG)(DC)(DC)(DA) (DT)(DC) ; GTTGGCCCTCTTTAGGGCCATC B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 GLY n 1 4 SER n 1 5 GLN n 1 6 ALA n 1 7 LEU n 1 8 PRO n 1 9 HIS n 1 10 GLY n 1 11 HIS n 1 12 MET n 1 13 GLN n 1 14 THR n 1 15 LEU n 1 16 ILE n 1 17 PHE n 1 18 LEU n 1 19 ASP n 1 20 LEU n 1 21 GLU n 1 22 ALA n 1 23 THR n 1 24 GLY n 1 25 LEU n 1 26 PRO n 1 27 TYR n 1 28 SER n 1 29 GLN n 1 30 PRO n 1 31 LYS n 1 32 ILE n 1 33 THR n 1 34 GLU n 1 35 LEU n 1 36 CYS n 1 37 LEU n 1 38 LEU n 1 39 ALA n 1 40 VAL n 1 41 HIS n 1 42 ARG n 1 43 HIS n 1 44 ALA n 1 45 LEU n 1 46 GLU n 1 47 ASN n 1 48 SER n 1 49 SER n 1 50 MET n 1 51 SER n 1 52 GLU n 1 53 GLY n 1 54 GLN n 1 55 PRO n 1 56 PRO n 1 57 LEU n 1 58 VAL n 1 59 PRO n 1 60 LYS n 1 61 PRO n 1 62 PRO n 1 63 ARG n 1 64 VAL n 1 65 VAL n 1 66 ASP n 1 67 LYS n 1 68 LEU n 1 69 SER n 1 70 LEU n 1 71 CYS n 1 72 ILE n 1 73 ALA n 1 74 PRO n 1 75 GLY n 1 76 LYS n 1 77 PRO n 1 78 CYS n 1 79 SER n 1 80 SER n 1 81 GLY n 1 82 ALA n 1 83 SER n 1 84 GLU n 1 85 ILE n 1 86 THR n 1 87 GLY n 1 88 LEU n 1 89 THR n 1 90 THR n 1 91 ALA n 1 92 GLY n 1 93 LEU n 1 94 GLU n 1 95 ALA n 1 96 HIS n 1 97 GLY n 1 98 ARG n 1 99 GLN n 1 100 ARG n 1 101 PHE n 1 102 ASN n 1 103 ASP n 1 104 ASN n 1 105 LEU n 1 106 ALA n 1 107 THR n 1 108 LEU n 1 109 LEU n 1 110 GLN n 1 111 VAL n 1 112 PHE n 1 113 LEU n 1 114 GLN n 1 115 ARG n 1 116 GLN n 1 117 PRO n 1 118 GLN n 1 119 PRO n 1 120 CYS n 1 121 CYS n 1 122 LEU n 1 123 VAL n 1 124 ALA n 1 125 HIS n 1 126 ASN n 1 127 GLY n 1 128 ASP n 1 129 ARG n 1 130 TYR n 1 131 ASP n 1 132 PHE n 1 133 PRO n 1 134 LEU n 1 135 LEU n 1 136 GLN n 1 137 ALA n 1 138 GLU n 1 139 LEU n 1 140 ALA n 1 141 SER n 1 142 LEU n 1 143 SER n 1 144 VAL n 1 145 ILE n 1 146 SER n 1 147 PRO n 1 148 LEU n 1 149 ASP n 1 150 GLY n 1 151 THR n 1 152 PHE n 1 153 CYS n 1 154 VAL n 1 155 ASP n 1 156 SER n 1 157 ILE n 1 158 ALA n 1 159 ALA n 1 160 LEU n 1 161 LYS n 1 162 THR n 1 163 LEU n 1 164 GLU n 1 165 GLN n 1 166 ALA n 1 167 SER n 1 168 SER n 1 169 PRO n 1 170 SER n 1 171 GLU n 1 172 HIS n 1 173 GLY n 1 174 PRO n 1 175 ARG n 1 176 LYS n 1 177 SER n 1 178 TYR n 1 179 SER n 1 180 LEU n 1 181 GLY n 1 182 SER n 1 183 ILE n 1 184 TYR n 1 185 THR n 1 186 ARG n 1 187 LEU n 1 188 TYR n 1 189 GLY n 1 190 GLN n 1 191 ALA n 1 192 PRO n 1 193 THR n 1 194 ASP n 1 195 SER n 1 196 HIS n 1 197 THR n 1 198 ALA n 1 199 GLU n 1 200 GLY n 1 201 ASP n 1 202 VAL n 1 203 LEU n 1 204 ALA n 1 205 LEU n 1 206 LEU n 1 207 SER n 1 208 ILE n 1 209 CYS n 1 210 GLN n 1 211 TRP n 1 212 LYS n 1 213 PRO n 1 214 GLN n 1 215 ALA n 1 216 LEU n 1 217 LEU n 1 218 GLN n 1 219 TRP n 1 220 VAL n 1 221 ASP n 1 222 LYS n 1 223 HIS n 1 224 ALA n 1 225 ARG n 1 226 PRO n 1 227 PHE n 1 228 SER n 1 229 THR n 1 230 ILE n 1 231 LYS n 1 232 PRO n 1 233 MET n 1 234 TYR n 1 235 GLY n 1 236 MET n 1 237 ALA n 1 238 ALA n 1 239 THR n 1 240 THR n 1 241 GLY n 1 242 THR n 1 243 ALA n 2 1 DG n 2 2 DT n 2 3 DT n 2 4 DG n 2 5 DG n 2 6 DC n 2 7 DC n 2 8 DC n 2 9 DT n 2 10 DC n 2 11 DT n 2 12 DT n 2 13 DT n 2 14 DA n 2 15 DG n 2 16 DG n 2 17 DG n 2 18 DC n 2 19 DC n 2 20 DA n 2 21 DT n 2 22 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 243 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene RiTREX1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Ranitomeya imitator' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 111125 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 22 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 ? ? ? A . n A 1 2 MET 2 1 ? ? ? A . n A 1 3 GLY 3 2 ? ? ? A . n A 1 4 SER 4 3 ? ? ? A . n A 1 5 GLN 5 4 ? ? ? A . n A 1 6 ALA 6 5 5 ALA ALA A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 PRO 8 7 7 PRO PRO A . n A 1 9 HIS 9 8 8 HIS HIS A . n A 1 10 GLY 10 9 9 GLY GLY A . n A 1 11 HIS 11 10 10 HIS HIS A . n A 1 12 MET 12 11 11 MET MET A . n A 1 13 GLN 13 12 12 GLN GLN A . n A 1 14 THR 14 13 13 THR THR A . n A 1 15 LEU 15 14 14 LEU LEU A . n A 1 16 ILE 16 15 15 ILE ILE A . n A 1 17 PHE 17 16 16 PHE PHE A . n A 1 18 LEU 18 17 17 LEU LEU A . n A 1 19 ASP 19 18 18 ASP ASP A . n A 1 20 LEU 20 19 19 LEU LEU A . n A 1 21 GLU 21 20 20 GLU GLU A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 THR 23 22 22 THR THR A . n A 1 24 GLY 24 23 23 GLY GLY A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 PRO 26 25 25 PRO PRO A . n A 1 27 TYR 27 26 26 TYR TYR A . n A 1 28 SER 28 27 27 SER SER A . n A 1 29 GLN 29 28 28 GLN GLN A . n A 1 30 PRO 30 29 29 PRO PRO A . n A 1 31 LYS 31 30 30 LYS LYS A . n A 1 32 ILE 32 31 31 ILE ILE A . n A 1 33 THR 33 32 32 THR THR A . n A 1 34 GLU 34 33 33 GLU GLU A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 CYS 36 35 35 CYS CYS A . n A 1 37 LEU 37 36 36 LEU LEU A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 ALA 39 38 38 ALA ALA A . n A 1 40 VAL 40 39 39 VAL VAL A . n A 1 41 HIS 41 40 40 HIS HIS A . n A 1 42 ARG 42 41 41 ARG ARG A . n A 1 43 HIS 43 42 42 HIS HIS A . n A 1 44 ALA 44 43 43 ALA ALA A . n A 1 45 LEU 45 44 44 LEU LEU A . n A 1 46 GLU 46 45 45 GLU GLU A . n A 1 47 ASN 47 46 46 ASN ASN A . n A 1 48 SER 48 47 47 SER SER A . n A 1 49 SER 49 48 48 SER SER A . n A 1 50 MET 50 49 49 MET MET A . n A 1 51 SER 51 50 50 SER SER A . n A 1 52 GLU 52 51 51 GLU GLU A . n A 1 53 GLY 53 52 52 GLY GLY A . n A 1 54 GLN 54 53 53 GLN GLN A . n A 1 55 PRO 55 54 54 PRO PRO A . n A 1 56 PRO 56 55 55 PRO PRO A . n A 1 57 LEU 57 56 56 LEU LEU A . n A 1 58 VAL 58 57 57 VAL VAL A . n A 1 59 PRO 59 58 58 PRO PRO A . n A 1 60 LYS 60 59 59 LYS LYS A . n A 1 61 PRO 61 60 60 PRO PRO A . n A 1 62 PRO 62 61 61 PRO PRO A . n A 1 63 ARG 63 62 62 ARG ARG A . n A 1 64 VAL 64 63 63 VAL VAL A . n A 1 65 VAL 65 64 64 VAL VAL A . n A 1 66 ASP 66 65 65 ASP ASP A . n A 1 67 LYS 67 66 66 LYS LYS A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 SER 69 68 68 SER SER A . n A 1 70 LEU 70 69 69 LEU LEU A . n A 1 71 CYS 71 70 70 CYS CYS A . n A 1 72 ILE 72 71 71 ILE ILE A . n A 1 73 ALA 73 72 72 ALA ALA A . n A 1 74 PRO 74 73 73 PRO PRO A . n A 1 75 GLY 75 74 74 GLY GLY A . n A 1 76 LYS 76 75 75 LYS LYS A . n A 1 77 PRO 77 76 76 PRO PRO A . n A 1 78 CYS 78 77 77 CYS CYS A . n A 1 79 SER 79 78 78 SER SER A . n A 1 80 SER 80 79 79 SER SER A . n A 1 81 GLY 81 80 80 GLY GLY A . n A 1 82 ALA 82 81 81 ALA ALA A . n A 1 83 SER 83 82 82 SER SER A . n A 1 84 GLU 84 83 83 GLU GLU A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 THR 86 85 85 THR THR A . n A 1 87 GLY 87 86 86 GLY GLY A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 THR 89 88 88 THR THR A . n A 1 90 THR 90 89 89 THR THR A . n A 1 91 ALA 91 90 90 ALA ALA A . n A 1 92 GLY 92 91 91 GLY GLY A . n A 1 93 LEU 93 92 92 LEU LEU A . n A 1 94 GLU 94 93 93 GLU GLU A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 HIS 96 95 95 HIS HIS A . n A 1 97 GLY 97 96 96 GLY GLY A . n A 1 98 ARG 98 97 97 ARG ARG A . n A 1 99 GLN 99 98 98 GLN GLN A . n A 1 100 ARG 100 99 99 ARG ARG A . n A 1 101 PHE 101 100 100 PHE PHE A . n A 1 102 ASN 102 101 101 ASN ASN A . n A 1 103 ASP 103 102 102 ASP ASP A . n A 1 104 ASN 104 103 103 ASN ASN A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 ALA 106 105 105 ALA ALA A . n A 1 107 THR 107 106 106 THR THR A . n A 1 108 LEU 108 107 107 LEU LEU A . n A 1 109 LEU 109 108 108 LEU LEU A . n A 1 110 GLN 110 109 109 GLN GLN A . n A 1 111 VAL 111 110 110 VAL VAL A . n A 1 112 PHE 112 111 111 PHE PHE A . n A 1 113 LEU 113 112 112 LEU LEU A . n A 1 114 GLN 114 113 113 GLN GLN A . n A 1 115 ARG 115 114 114 ARG ARG A . n A 1 116 GLN 116 115 115 GLN GLN A . n A 1 117 PRO 117 116 116 PRO PRO A . n A 1 118 GLN 118 117 117 GLN GLN A . n A 1 119 PRO 119 118 118 PRO PRO A . n A 1 120 CYS 120 119 119 CYS CYS A . n A 1 121 CYS 121 120 120 CYS CYS A . n A 1 122 LEU 122 121 121 LEU LEU A . n A 1 123 VAL 123 122 122 VAL VAL A . n A 1 124 ALA 124 123 123 ALA ALA A . n A 1 125 HIS 125 124 124 HIS HIS A . n A 1 126 ASN 126 125 125 ASN ASN A . n A 1 127 GLY 127 126 126 GLY GLY A . n A 1 128 ASP 128 127 127 ASP ASP A . n A 1 129 ARG 129 128 128 ARG ARG A . n A 1 130 TYR 130 129 129 TYR TYR A . n A 1 131 ASP 131 130 130 ASP ASP A . n A 1 132 PHE 132 131 131 PHE PHE A . n A 1 133 PRO 133 132 132 PRO PRO A . n A 1 134 LEU 134 133 133 LEU LEU A . n A 1 135 LEU 135 134 134 LEU LEU A . n A 1 136 GLN 136 135 135 GLN GLN A . n A 1 137 ALA 137 136 136 ALA ALA A . n A 1 138 GLU 138 137 137 GLU GLU A . n A 1 139 LEU 139 138 138 LEU LEU A . n A 1 140 ALA 140 139 139 ALA ALA A . n A 1 141 SER 141 140 140 SER SER A . n A 1 142 LEU 142 141 141 LEU LEU A . n A 1 143 SER 143 142 142 SER SER A . n A 1 144 VAL 144 143 143 VAL VAL A . n A 1 145 ILE 145 144 144 ILE ILE A . n A 1 146 SER 146 145 145 SER SER A . n A 1 147 PRO 147 146 146 PRO PRO A . n A 1 148 LEU 148 147 147 LEU LEU A . n A 1 149 ASP 149 148 148 ASP ASP A . n A 1 150 GLY 150 149 149 GLY GLY A . n A 1 151 THR 151 150 150 THR THR A . n A 1 152 PHE 152 151 151 PHE PHE A . n A 1 153 CYS 153 152 152 CYS CYS A . n A 1 154 VAL 154 153 153 VAL VAL A . n A 1 155 ASP 155 154 154 ASP ASP A . n A 1 156 SER 156 155 155 SER SER A . n A 1 157 ILE 157 156 156 ILE ILE A . n A 1 158 ALA 158 157 157 ALA ALA A . n A 1 159 ALA 159 158 158 ALA ALA A . n A 1 160 LEU 160 159 159 LEU LEU A . n A 1 161 LYS 161 160 160 LYS LYS A . n A 1 162 THR 162 161 161 THR THR A . n A 1 163 LEU 163 162 162 LEU LEU A . n A 1 164 GLU 164 163 163 GLU GLU A . n A 1 165 GLN 165 164 164 GLN GLN A . n A 1 166 ALA 166 165 165 ALA ALA A . n A 1 167 SER 167 166 166 SER SER A . n A 1 168 SER 168 167 ? ? ? A . n A 1 169 PRO 169 168 ? ? ? A . n A 1 170 SER 170 169 ? ? ? A . n A 1 171 GLU 171 170 ? ? ? A . n A 1 172 HIS 172 171 ? ? ? A . n A 1 173 GLY 173 172 ? ? ? A . n A 1 174 PRO 174 173 173 PRO PRO A . n A 1 175 ARG 175 174 174 ARG ARG A . n A 1 176 LYS 176 175 175 LYS LYS A . n A 1 177 SER 177 176 176 SER SER A . n A 1 178 TYR 178 177 177 TYR TYR A . n A 1 179 SER 179 178 178 SER SER A . n A 1 180 LEU 180 179 179 LEU LEU A . n A 1 181 GLY 181 180 180 GLY GLY A . n A 1 182 SER 182 181 181 SER SER A . n A 1 183 ILE 183 182 182 ILE ILE A . n A 1 184 TYR 184 183 183 TYR TYR A . n A 1 185 THR 185 184 184 THR THR A . n A 1 186 ARG 186 185 185 ARG ARG A . n A 1 187 LEU 187 186 186 LEU LEU A . n A 1 188 TYR 188 187 187 TYR TYR A . n A 1 189 GLY 189 188 188 GLY GLY A . n A 1 190 GLN 190 189 189 GLN GLN A . n A 1 191 ALA 191 190 190 ALA ALA A . n A 1 192 PRO 192 191 191 PRO PRO A . n A 1 193 THR 193 192 192 THR THR A . n A 1 194 ASP 194 193 193 ASP ASP A . n A 1 195 SER 195 194 194 SER SER A . n A 1 196 HIS 196 195 195 HIS HIS A . n A 1 197 THR 197 196 196 THR THR A . n A 1 198 ALA 198 197 197 ALA ALA A . n A 1 199 GLU 199 198 198 GLU GLU A . n A 1 200 GLY 200 199 199 GLY GLY A . n A 1 201 ASP 201 200 200 ASP ASP A . n A 1 202 VAL 202 201 201 VAL VAL A . n A 1 203 LEU 203 202 202 LEU LEU A . n A 1 204 ALA 204 203 203 ALA ALA A . n A 1 205 LEU 205 204 204 LEU LEU A . n A 1 206 LEU 206 205 205 LEU LEU A . n A 1 207 SER 207 206 206 SER SER A . n A 1 208 ILE 208 207 207 ILE ILE A . n A 1 209 CYS 209 208 208 CYS CYS A . n A 1 210 GLN 210 209 209 GLN GLN A . n A 1 211 TRP 211 210 210 TRP TRP A . n A 1 212 LYS 212 211 211 LYS LYS A . n A 1 213 PRO 213 212 212 PRO PRO A . n A 1 214 GLN 214 213 213 GLN GLN A . n A 1 215 ALA 215 214 214 ALA ALA A . n A 1 216 LEU 216 215 215 LEU LEU A . n A 1 217 LEU 217 216 216 LEU LEU A . n A 1 218 GLN 218 217 217 GLN GLN A . n A 1 219 TRP 219 218 218 TRP TRP A . n A 1 220 VAL 220 219 219 VAL VAL A . n A 1 221 ASP 221 220 220 ASP ASP A . n A 1 222 LYS 222 221 221 LYS LYS A . n A 1 223 HIS 223 222 222 HIS HIS A . n A 1 224 ALA 224 223 223 ALA ALA A . n A 1 225 ARG 225 224 224 ARG ARG A . n A 1 226 PRO 226 225 225 PRO PRO A . n A 1 227 PHE 227 226 226 PHE PHE A . n A 1 228 SER 228 227 227 SER SER A . n A 1 229 THR 229 228 228 THR THR A . n A 1 230 ILE 230 229 229 ILE ILE A . n A 1 231 LYS 231 230 230 LYS LYS A . n A 1 232 PRO 232 231 231 PRO PRO A . n A 1 233 MET 233 232 232 MET MET A . n A 1 234 TYR 234 233 233 TYR TYR A . n A 1 235 GLY 235 234 234 GLY GLY A . n A 1 236 MET 236 235 ? ? ? A . n A 1 237 ALA 237 236 ? ? ? A . n A 1 238 ALA 238 237 ? ? ? A . n A 1 239 THR 239 238 ? ? ? A . n A 1 240 THR 240 239 ? ? ? A . n A 1 241 GLY 241 240 ? ? ? A . n A 1 242 THR 242 241 ? ? ? A . n A 1 243 ALA 243 242 ? ? ? A . n B 2 1 DG 1 1 1 DG DG B . n B 2 2 DT 2 2 2 DT DT B . n B 2 3 DT 3 3 3 DT DT B . n B 2 4 DG 4 4 4 DG DG B . n B 2 5 DG 5 5 5 DG DG B . n B 2 6 DC 6 6 6 DC DC B . n B 2 7 DC 7 7 7 DC DC B . n B 2 8 DC 8 8 8 DC DC B . n B 2 9 DT 9 9 9 DT DT B . n B 2 10 DC 10 10 ? ? ? B . n B 2 11 DT 11 11 ? ? ? B . n B 2 12 DT 12 12 ? ? ? B . n B 2 13 DT 13 13 13 DT DT B . n B 2 14 DA 14 14 14 DA DA B . n B 2 15 DG 15 15 15 DG DG B . n B 2 16 DG 16 16 16 DG DG B . n B 2 17 DG 17 17 17 DG DG B . n B 2 18 DC 18 18 18 DC DC B . n B 2 19 DC 19 19 19 DC DC B . n B 2 20 DA 20 20 20 DA DA B . n B 2 21 DT 21 21 21 DT DT B . n B 2 22 DC 22 22 22 DC DC B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 101 101 MG MG B . D 4 HOH 1 301 39 HOH HOH A . D 4 HOH 2 302 36 HOH HOH A . D 4 HOH 3 303 14 HOH HOH A . D 4 HOH 4 304 29 HOH HOH A . D 4 HOH 5 305 16 HOH HOH A . D 4 HOH 6 306 75 HOH HOH A . D 4 HOH 7 307 2 HOH HOH A . D 4 HOH 8 308 43 HOH HOH A . D 4 HOH 9 309 33 HOH HOH A . D 4 HOH 10 310 7 HOH HOH A . D 4 HOH 11 311 40 HOH HOH A . D 4 HOH 12 312 55 HOH HOH A . D 4 HOH 13 313 54 HOH HOH A . D 4 HOH 14 314 1 HOH HOH A . D 4 HOH 15 315 37 HOH HOH A . D 4 HOH 16 316 48 HOH HOH A . D 4 HOH 17 317 25 HOH HOH A . D 4 HOH 18 318 13 HOH HOH A . D 4 HOH 19 319 4 HOH HOH A . D 4 HOH 20 320 42 HOH HOH A . D 4 HOH 21 321 5 HOH HOH A . D 4 HOH 22 322 34 HOH HOH A . D 4 HOH 23 323 56 HOH HOH A . D 4 HOH 24 324 15 HOH HOH A . D 4 HOH 25 325 45 HOH HOH A . D 4 HOH 26 326 28 HOH HOH A . D 4 HOH 27 327 44 HOH HOH A . D 4 HOH 28 328 68 HOH HOH A . D 4 HOH 29 329 11 HOH HOH A . D 4 HOH 30 330 41 HOH HOH A . D 4 HOH 31 331 73 HOH HOH A . D 4 HOH 32 332 27 HOH HOH A . D 4 HOH 33 333 58 HOH HOH A . D 4 HOH 34 334 9 HOH HOH A . D 4 HOH 35 335 12 HOH HOH A . D 4 HOH 36 336 59 HOH HOH A . D 4 HOH 37 337 61 HOH HOH A . D 4 HOH 38 338 6 HOH HOH A . D 4 HOH 39 339 57 HOH HOH A . D 4 HOH 40 340 19 HOH HOH A . D 4 HOH 41 341 70 HOH HOH A . D 4 HOH 42 342 8 HOH HOH A . D 4 HOH 43 343 38 HOH HOH A . D 4 HOH 44 344 10 HOH HOH A . D 4 HOH 45 345 66 HOH HOH A . D 4 HOH 46 346 67 HOH HOH A . D 4 HOH 47 347 52 HOH HOH A . D 4 HOH 48 348 62 HOH HOH A . D 4 HOH 49 349 51 HOH HOH A . D 4 HOH 50 350 22 HOH HOH A . D 4 HOH 51 351 35 HOH HOH A . D 4 HOH 52 352 17 HOH HOH A . D 4 HOH 53 353 24 HOH HOH A . D 4 HOH 54 354 50 HOH HOH A . D 4 HOH 55 355 60 HOH HOH A . D 4 HOH 56 356 76 HOH HOH A . D 4 HOH 57 357 49 HOH HOH A . D 4 HOH 58 358 20 HOH HOH A . D 4 HOH 59 359 69 HOH HOH A . D 4 HOH 60 360 23 HOH HOH A . D 4 HOH 61 361 53 HOH HOH A . D 4 HOH 62 362 63 HOH HOH A . D 4 HOH 63 363 74 HOH HOH A . D 4 HOH 64 364 18 HOH HOH A . D 4 HOH 65 365 30 HOH HOH A . D 4 HOH 66 366 46 HOH HOH A . D 4 HOH 67 367 72 HOH HOH A . D 4 HOH 68 368 31 HOH HOH A . D 4 HOH 69 369 64 HOH HOH A . D 4 HOH 70 370 32 HOH HOH A . E 4 HOH 1 201 3 HOH HOH B . E 4 HOH 2 202 71 HOH HOH B . E 4 HOH 3 203 47 HOH HOH B . E 4 HOH 4 204 21 HOH HOH B . E 4 HOH 5 205 26 HOH HOH B . E 4 HOH 6 206 65 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.21.1_5127 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9L8D _cell.details ? _cell.formula_units_Z ? _cell.length_a 144.684 _cell.length_a_esd ? _cell.length_b 144.684 _cell.length_b_esd ? _cell.length_c 82.201 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9L8D _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9L8D _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.27 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 62.38 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M Citric acid pH 4.0, 20% PEG 6000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 289 # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-08-22 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97849 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97849 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate 41.19 _reflns.entry_id 9L8D _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.03 _reflns.d_resolution_low 36.17 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 28440 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.89 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 31.9 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.019 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.981 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.03 _reflns_shell.d_res_low 2.10 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.35 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2788 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 32.5 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.174 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.507 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 99.25 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9L8D _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.03 _refine.ls_d_res_low 36.17 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 28428 _refine.ls_number_reflns_R_free 1377 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.90 _refine.ls_percent_reflns_R_free 4.84 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2034 _refine.ls_R_factor_R_free 0.2293 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2022 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 7TQN _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.95 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.23 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1711 _refine_hist.pdbx_number_atoms_nucleic_acid 385 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 76 _refine_hist.number_atoms_total 2173 _refine_hist.d_res_high 2.03 _refine_hist.d_res_low 36.17 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.003 ? 2181 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.638 ? 3044 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 20.851 ? 832 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.039 ? 350 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 327 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.03 2.10 . . 119 2669 99.00 . . . . 0.3621 . . . . . . . . . . . 0.3703 'X-RAY DIFFRACTION' 2.10 2.19 . . 141 2666 100.00 . . . . 0.3184 . . . . . . . . . . . 0.3117 'X-RAY DIFFRACTION' 2.19 2.29 . . 136 2660 100.00 . . . . 0.2758 . . . . . . . . . . . 0.2969 'X-RAY DIFFRACTION' 2.29 2.41 . . 146 2666 100.00 . . . . 0.2552 . . . . . . . . . . . 0.2567 'X-RAY DIFFRACTION' 2.41 2.56 . . 145 2672 100.00 . . . . 0.2269 . . . . . . . . . . . 0.2419 'X-RAY DIFFRACTION' 2.56 2.75 . . 118 2697 100.00 . . . . 0.2296 . . . . . . . . . . . 0.2518 'X-RAY DIFFRACTION' 2.75 3.03 . . 154 2683 100.00 . . . . 0.2115 . . . . . . . . . . . 0.2189 'X-RAY DIFFRACTION' 3.03 3.47 . . 147 2721 100.00 . . . . 0.2051 . . . . . . . . . . . 0.2415 'X-RAY DIFFRACTION' 3.47 4.37 . . 140 2735 100.00 . . . . 0.1636 . . . . . . . . . . . 0.2029 'X-RAY DIFFRACTION' 4.37 36.17 . . 131 2882 100.00 . . . . 0.1739 . . . . . . . . . . . 0.2035 # _struct.entry_id 9L8D _struct.title 'Structure of frog TREX1-DNA complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9L8D _struct_keywords.text 'nuclease, DNase, innate immunity, autoimmunity, cancer, IMMUNE SYSTEM/DNA, IMMUNE SYSTEM-DNA complex' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9L8D 9L8D ? 1 ? 1 2 PDB 9L8D 9L8D ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9L8D A 1 ? 243 ? 9L8D 0 ? 242 ? 0 242 2 2 9L8D B 1 ? 22 ? 9L8D 1 ? 22 ? 1 22 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA tetrameric 4 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7350 ? 1 MORE -30 ? 1 'SSA (A^2)' 23460 ? 2 'ABSA (A^2)' 1970 ? 2 MORE -14 ? 2 'SSA (A^2)' 13430 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C,D,E 2 1 A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 15_554 y,x,-z-1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -82.2010000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LEU A 25 ? GLN A 29 ? LEU A 24 GLN A 28 5 ? 5 HELX_P HELX_P2 AA2 ARG A 42 ? ASN A 47 ? ARG A 41 ASN A 46 1 ? 6 HELX_P HELX_P3 AA3 SER A 79 ? GLY A 87 ? SER A 78 GLY A 86 1 ? 9 HELX_P HELX_P4 AA4 THR A 89 ? HIS A 96 ? THR A 88 HIS A 95 1 ? 8 HELX_P HELX_P5 AA5 ASN A 102 ? ARG A 115 ? ASN A 101 ARG A 114 1 ? 14 HELX_P HELX_P6 AA6 TYR A 130 ? LEU A 142 ? TYR A 129 LEU A 141 1 ? 13 HELX_P HELX_P7 AA7 SER A 156 ? SER A 167 ? SER A 155 SER A 166 1 ? 12 HELX_P HELX_P8 AA8 SER A 179 ? GLY A 189 ? SER A 178 GLY A 188 1 ? 11 HELX_P HELX_P9 AA9 THR A 197 ? GLN A 210 ? THR A 196 GLN A 209 1 ? 14 HELX_P HELX_P10 AB1 LYS A 212 ? ALA A 224 ? LYS A 211 ALA A 223 1 ? 13 HELX_P HELX_P11 AB2 SER A 228 ? ILE A 230 ? SER A 227 ILE A 229 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 19 OD1 ? ? ? 1_555 C MG . MG ? ? A ASP 18 B MG 101 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc2 metalc ? ? D HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 309 B MG 101 1_555 ? ? ? ? ? ? ? 2.235 ? ? metalc3 metalc ? ? D HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 322 B MG 101 1_555 ? ? ? ? ? ? ? 2.357 ? ? metalc4 metalc ? ? B DT 21 "O3'" ? ? ? 1_555 C MG . MG ? ? B DT 21 B MG 101 1_555 ? ? ? ? ? ? ? 2.682 ? ? metalc5 metalc ? ? B DC 22 OP1 ? ? ? 1_555 C MG . MG ? ? B DC 22 B MG 101 1_555 ? ? ? ? ? ? ? 2.285 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 B DC 22 N3 ? ? B DG 1 B DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 B DC 22 O2 ? ? B DG 1 B DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 B DC 22 N4 ? ? B DG 1 B DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 3 N3 ? ? ? 1_555 B DA 20 N1 ? ? B DT 3 B DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 3 O4 ? ? ? 1_555 B DA 20 N6 ? ? B DT 3 B DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 4 N1 ? ? ? 1_555 B DC 19 N3 ? ? B DG 4 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 4 N2 ? ? ? 1_555 B DC 19 O2 ? ? B DG 4 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 4 O6 ? ? ? 1_555 B DC 19 N4 ? ? B DG 4 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 5 N1 ? ? ? 1_555 B DC 18 N3 ? ? B DG 5 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 5 N2 ? ? ? 1_555 B DC 18 O2 ? ? B DG 5 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 5 O6 ? ? ? 1_555 B DC 18 N4 ? ? B DG 5 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 6 N3 ? ? ? 1_555 B DG 17 N1 ? ? B DC 6 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 6 N4 ? ? ? 1_555 B DG 17 O6 ? ? B DC 6 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 6 O2 ? ? ? 1_555 B DG 17 N2 ? ? B DC 6 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 7 N3 ? ? ? 1_555 B DG 16 N1 ? ? B DC 7 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 7 N4 ? ? ? 1_555 B DG 16 O6 ? ? B DC 7 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 7 O2 ? ? ? 1_555 B DG 16 N2 ? ? B DC 7 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 8 N3 ? ? ? 1_555 B DG 15 N1 ? ? B DC 8 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 8 N4 ? ? ? 1_555 B DG 15 O6 ? ? B DC 8 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 8 O2 ? ? ? 1_555 B DG 15 N2 ? ? B DC 8 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 9 N3 ? ? ? 1_555 B DA 14 N1 ? ? B DT 9 B DA 14 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 19 ? A ASP 18 ? 1_555 MG ? C MG . ? B MG 101 ? 1_555 O ? D HOH . ? A HOH 309 ? 1_555 92.6 ? 2 OD1 ? A ASP 19 ? A ASP 18 ? 1_555 MG ? C MG . ? B MG 101 ? 1_555 O ? D HOH . ? A HOH 322 ? 1_555 88.5 ? 3 O ? D HOH . ? A HOH 309 ? 1_555 MG ? C MG . ? B MG 101 ? 1_555 O ? D HOH . ? A HOH 322 ? 1_555 79.5 ? 4 OD1 ? A ASP 19 ? A ASP 18 ? 1_555 MG ? C MG . ? B MG 101 ? 1_555 "O3'" ? B DT 21 ? B DT 21 ? 1_555 161.0 ? 5 O ? D HOH . ? A HOH 309 ? 1_555 MG ? C MG . ? B MG 101 ? 1_555 "O3'" ? B DT 21 ? B DT 21 ? 1_555 101.9 ? 6 O ? D HOH . ? A HOH 322 ? 1_555 MG ? C MG . ? B MG 101 ? 1_555 "O3'" ? B DT 21 ? B DT 21 ? 1_555 82.1 ? 7 OD1 ? A ASP 19 ? A ASP 18 ? 1_555 MG ? C MG . ? B MG 101 ? 1_555 OP1 ? B DC 22 ? B DC 22 ? 1_555 105.0 ? 8 O ? D HOH . ? A HOH 309 ? 1_555 MG ? C MG . ? B MG 101 ? 1_555 OP1 ? B DC 22 ? B DC 22 ? 1_555 160.7 ? 9 O ? D HOH . ? A HOH 322 ? 1_555 MG ? C MG . ? B MG 101 ? 1_555 OP1 ? B DC 22 ? B DC 22 ? 1_555 92.8 ? 10 "O3'" ? B DT 21 ? B DT 21 ? 1_555 MG ? C MG . ? B MG 101 ? 1_555 OP1 ? B DC 22 ? B DC 22 ? 1_555 59.3 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLN 54 A . ? GLN 53 A PRO 55 A ? PRO 54 A 1 5.56 2 GLN 118 A . ? GLN 117 A PRO 119 A ? PRO 118 A 1 0.02 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASP A 66 ? CYS A 71 ? ASP A 65 CYS A 70 AA1 2 ILE A 32 ? HIS A 41 ? ILE A 31 HIS A 40 AA1 3 THR A 14 ? ALA A 22 ? THR A 13 ALA A 21 AA1 4 CYS A 120 ? ALA A 124 ? CYS A 119 ALA A 123 AA1 5 PHE A 152 ? ASP A 155 ? PHE A 151 ASP A 154 AA1 6 ARG A 225 ? PRO A 226 ? ARG A 224 PRO A 225 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ASP A 66 ? O ASP A 65 N ALA A 39 ? N ALA A 38 AA1 2 3 O VAL A 40 ? O VAL A 39 N LEU A 15 ? N LEU A 14 AA1 3 4 N ILE A 16 ? N ILE A 15 O CYS A 121 ? O CYS A 120 AA1 4 5 N LEU A 122 ? N LEU A 121 O PHE A 152 ? O PHE A 151 AA1 5 6 N CYS A 153 ? N CYS A 152 O ARG A 225 ? O ARG A 224 # _pdbx_entry_details.entry_id 9L8D _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A PRO 25 ? ? O A HOH 301 ? ? 2.04 2 1 OD2 A ASP 200 ? ? O A HOH 302 ? ? 2.18 3 1 O A HOH 344 ? ? O A HOH 367 ? ? 2.18 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 367 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 367 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 8_554 _pdbx_validate_symm_contact.dist 2.10 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TYR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 129 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -133.82 _pdbx_validate_torsion.psi -70.13 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 361 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -10.9566 -12.5855 -27.2884 0.4152 ? -0.0640 ? 0.1072 ? 0.3749 ? 0.0265 ? 0.3520 ? 3.4794 ? -0.8817 ? -0.3507 ? 4.8872 ? 0.0380 ? 2.5112 ? 0.0215 ? -0.2460 ? -0.0832 ? 0.4675 ? -0.1904 ? 0.1670 ? 0.1360 ? -0.1991 ? 0.2139 ? 2 'X-RAY DIFFRACTION' ? refined -30.5701 -15.4344 -29.7508 0.6071 ? -0.0240 ? 0.2006 ? 0.7422 ? -0.0016 ? 0.9138 ? 4.9736 ? 5.5237 ? -2.3258 ? 6.7072 ? -2.7637 ? 1.5204 ? 0.1644 ? -0.7861 ? -0.0707 ? 0.8894 ? -0.1702 ? 0.8813 ? -0.0804 ? -0.2686 ? -0.0776 ? 3 'X-RAY DIFFRACTION' ? refined -1.7533 -17.4242 -38.2345 0.3936 ? 0.0063 ? 0.0663 ? 0.3371 ? 0.0611 ? 0.3550 ? 2.9164 ? -0.6265 ? 0.1861 ? 4.8555 ? 0.8303 ? 1.3242 ? -0.0505 ? 0.0002 ? -0.3739 ? -0.0893 ? -0.0491 ? -0.3861 ? 0.1688 ? 0.0204 ? 0.1064 ? 4 'X-RAY DIFFRACTION' ? refined -3.9519 -10.7020 -25.7188 0.5284 ? -0.0312 ? 0.0191 ? 0.4296 ? 0.0617 ? 0.3027 ? 4.9111 ? 0.1223 ? 0.4415 ? 2.6513 ? 0.3503 ? 1.1213 ? -0.1064 ? -0.6215 ? -0.2158 ? 0.5151 ? -0.1299 ? -0.4377 ? 0.2081 ? -0.0562 ? 0.2258 ? 5 'X-RAY DIFFRACTION' ? refined -17.3111 -18.1669 -21.9378 0.5332 ? -0.0332 ? 0.1983 ? 0.4892 ? 0.0400 ? 0.5017 ? 2.2498 ? 0.6267 ? -0.5688 ? 3.3158 ? -0.6399 ? 3.5191 ? -0.0622 ? -0.4294 ? -0.2783 ? 0.8404 ? -0.0400 ? 0.5312 ? 0.1758 ? -0.2955 ? 0.0888 ? 6 'X-RAY DIFFRACTION' ? refined -5.4207 -28.1385 -9.6281 1.0954 ? -0.2595 ? 0.1062 ? 0.7353 ? 0.0581 ? 0.5843 ? 7.6179 ? -2.0673 ? -0.2911 ? 5.0018 ? 1.5052 ? 7.5137 ? -0.2950 ? -1.3877 ? -0.4410 ? 1.3063 ? -0.1348 ? 0.6893 ? 0.3141 ? -0.2232 ? 0.1970 ? 7 'X-RAY DIFFRACTION' ? refined -6.7456 -29.8405 -10.4102 1.4125 ? -0.2292 ? 0.0315 ? 0.8152 ? 0.0595 ? 0.5931 ? 4.2419 ? -1.0968 ? -1.8962 ? 2.2732 ? 2.0342 ? 5.5447 ? 0.5097 ? -1.3796 ? -0.1019 ? 1.7616 ? 0.2292 ? 0.0909 ? 0.8774 ? 0.1522 ? -0.6085 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 5 through 45 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 46 through 64 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 65 through 114 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 115 through 150 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 151 through 234 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 1 through 13 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 14 through 22 ) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 0 ? A SER 1 2 1 Y 1 A MET 1 ? A MET 2 3 1 Y 1 A GLY 2 ? A GLY 3 4 1 Y 1 A SER 3 ? A SER 4 5 1 Y 1 A GLN 4 ? A GLN 5 6 1 Y 1 A SER 167 ? A SER 168 7 1 Y 1 A PRO 168 ? A PRO 169 8 1 Y 1 A SER 169 ? A SER 170 9 1 Y 1 A GLU 170 ? A GLU 171 10 1 Y 1 A HIS 171 ? A HIS 172 11 1 Y 1 A GLY 172 ? A GLY 173 12 1 Y 1 A MET 235 ? A MET 236 13 1 Y 1 A ALA 236 ? A ALA 237 14 1 Y 1 A ALA 237 ? A ALA 238 15 1 Y 1 A THR 238 ? A THR 239 16 1 Y 1 A THR 239 ? A THR 240 17 1 Y 1 A GLY 240 ? A GLY 241 18 1 Y 1 A THR 241 ? A THR 242 19 1 Y 1 A ALA 242 ? A ALA 243 20 1 Y 1 B DC 10 ? B DC 10 21 1 Y 1 B DT 11 ? B DT 11 22 1 Y 1 B DT 12 ? B DT 12 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 MG MG MG N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 SER N N N N 434 SER CA C N S 435 SER C C N N 436 SER O O N N 437 SER CB C N N 438 SER OG O N N 439 SER OXT O N N 440 SER H H N N 441 SER H2 H N N 442 SER HA H N N 443 SER HB2 H N N 444 SER HB3 H N N 445 SER HG H N N 446 SER HXT H N N 447 THR N N N N 448 THR CA C N S 449 THR C C N N 450 THR O O N N 451 THR CB C N R 452 THR OG1 O N N 453 THR CG2 C N N 454 THR OXT O N N 455 THR H H N N 456 THR H2 H N N 457 THR HA H N N 458 THR HB H N N 459 THR HG1 H N N 460 THR HG21 H N N 461 THR HG22 H N N 462 THR HG23 H N N 463 THR HXT H N N 464 TRP N N N N 465 TRP CA C N S 466 TRP C C N N 467 TRP O O N N 468 TRP CB C N N 469 TRP CG C Y N 470 TRP CD1 C Y N 471 TRP CD2 C Y N 472 TRP NE1 N Y N 473 TRP CE2 C Y N 474 TRP CE3 C Y N 475 TRP CZ2 C Y N 476 TRP CZ3 C Y N 477 TRP CH2 C Y N 478 TRP OXT O N N 479 TRP H H N N 480 TRP H2 H N N 481 TRP HA H N N 482 TRP HB2 H N N 483 TRP HB3 H N N 484 TRP HD1 H N N 485 TRP HE1 H N N 486 TRP HE3 H N N 487 TRP HZ2 H N N 488 TRP HZ3 H N N 489 TRP HH2 H N N 490 TRP HXT H N N 491 TYR N N N N 492 TYR CA C N S 493 TYR C C N N 494 TYR O O N N 495 TYR CB C N N 496 TYR CG C Y N 497 TYR CD1 C Y N 498 TYR CD2 C Y N 499 TYR CE1 C Y N 500 TYR CE2 C Y N 501 TYR CZ C Y N 502 TYR OH O N N 503 TYR OXT O N N 504 TYR H H N N 505 TYR H2 H N N 506 TYR HA H N N 507 TYR HB2 H N N 508 TYR HB3 H N N 509 TYR HD1 H N N 510 TYR HD2 H N N 511 TYR HE1 H N N 512 TYR HE2 H N N 513 TYR HH H N N 514 TYR HXT H N N 515 VAL N N N N 516 VAL CA C N S 517 VAL C C N N 518 VAL O O N N 519 VAL CB C N N 520 VAL CG1 C N N 521 VAL CG2 C N N 522 VAL OXT O N N 523 VAL H H N N 524 VAL H2 H N N 525 VAL HA H N N 526 VAL HB H N N 527 VAL HG11 H N N 528 VAL HG12 H N N 529 VAL HG13 H N N 530 VAL HG21 H N N 531 VAL HG22 H N N 532 VAL HG23 H N N 533 VAL HXT H N N 534 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9L8D 'double helix' 9L8D 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 B DC 22 1_555 -0.232 -0.031 0.301 30.781 5.335 0.765 1 B_DG1:DC22_B B 1 ? B 22 ? 19 1 1 B DT 3 1_555 B DA 20 1_555 0.016 -0.013 0.115 -10.645 -1.969 -0.817 2 B_DT3:DA20_B B 3 ? B 20 ? 20 1 1 B DG 4 1_555 B DC 19 1_555 -0.311 -0.269 0.135 -3.164 -12.329 -2.141 3 B_DG4:DC19_B B 4 ? B 19 ? 19 1 1 B DG 5 1_555 B DC 18 1_555 0.645 -0.065 0.322 10.825 -13.065 2.627 4 B_DG5:DC18_B B 5 ? B 18 ? 19 1 1 B DC 6 1_555 B DG 17 1_555 -0.189 -0.127 0.360 0.637 -18.123 -8.105 5 B_DC6:DG17_B B 6 ? B 17 ? 19 1 1 B DC 7 1_555 B DG 16 1_555 0.294 -0.234 0.362 -4.761 -14.160 1.042 6 B_DC7:DG16_B B 7 ? B 16 ? 19 1 1 B DC 8 1_555 B DG 15 1_555 0.407 -0.387 -0.513 -4.230 -1.184 -10.880 7 B_DC8:DG15_B B 8 ? B 15 ? 19 1 1 B DT 9 1_555 B DA 14 1_555 -2.561 0.015 -0.124 5.401 -12.332 30.274 8 B_DT9:DA14_B B 9 ? B 14 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DT 3 1_555 B DA 20 1_555 B DG 4 1_555 B DC 19 1_555 -0.696 1.917 3.250 -2.525 -4.541 39.905 3.285 0.734 3.060 -6.619 3.680 40.228 1 BB_DT3DG4:DC19DA20_BB B 3 ? B 20 ? B 4 ? B 19 ? 1 B DG 4 1_555 B DC 19 1_555 B DG 5 1_555 B DC 18 1_555 0.469 0.809 3.114 -1.545 6.961 35.356 0.347 -0.970 3.188 11.319 2.512 36.045 2 BB_DG4DG5:DC18DC19_BB B 4 ? B 19 ? B 5 ? B 18 ? 1 B DG 5 1_555 B DC 18 1_555 B DC 6 1_555 B DG 17 1_555 -0.412 0.348 3.535 -2.614 -6.671 39.976 1.302 0.281 3.455 -9.663 3.786 40.587 3 BB_DG5DC6:DG17DC18_BB B 5 ? B 18 ? B 6 ? B 17 ? 1 B DC 6 1_555 B DG 17 1_555 B DC 7 1_555 B DG 16 1_555 0.600 0.349 3.447 3.175 0.054 42.771 0.472 -0.486 3.481 0.073 -4.346 42.883 4 BB_DC6DC7:DG16DG17_BB B 6 ? B 17 ? B 7 ? B 16 ? 1 B DC 7 1_555 B DG 16 1_555 B DC 8 1_555 B DG 15 1_555 -0.549 0.838 3.300 6.230 0.405 36.480 1.267 1.701 3.176 0.642 -9.863 36.993 5 BB_DC7DC8:DG15DG16_BB B 7 ? B 16 ? B 8 ? B 15 ? 1 B DC 8 1_555 B DG 15 1_555 B DT 9 1_555 B DA 14 1_555 0.806 0.251 3.114 -2.119 8.523 17.832 -3.129 -3.297 2.820 25.579 6.359 19.861 6 BB_DC8DT9:DA14DG15_BB B 8 ? B 15 ? B 9 ? B 14 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 32270920 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7TQN _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9L8D _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.006912 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006912 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012165 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H MG N O P S # loop_ # loop_ #