data_9LBS # _entry.id 9LBS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.403 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9LBS pdb_00009lbs 10.2210/pdb9lbs/pdb WWPDB D_1300055365 ? ? EMDB EMD-62955 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-04-02 ? 2 'EM metadata' 1 0 2025-04-02 ? 3 'Additional map' 1 0 2025-04-02 1 4 FSC 1 0 2025-04-02 ? 5 'Half map' 1 0 2025-04-02 1 6 'Half map' 1 0 2025-04-02 2 7 Image 1 0 2025-04-02 ? 8 Mask 1 0 2025-04-02 1 9 'Primary map' 1 0 2025-04-02 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 FSC repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 'Half map' repository 'Initial release' ? ? 7 7 Image repository 'Initial release' ? ? 8 8 Mask repository 'Initial release' ? ? 9 9 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9LBS _pdbx_database_status.recvd_initial_deposition_date 2025-01-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of Omicron BA.1 RBD complexed with ConBA-998,S309 and S304Fabs' _pdbx_database_related.db_id EMD-62955 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 4 _pdbx_contact_author.email zhangzheng1975@aliyun.com _pdbx_contact_author.name_first zheng _pdbx_contact_author.name_last zhang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-3544-1389 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhang, Z.' 1 0000-0002-3544-1389 'Ju, B.' 2 0000-0003-0768-6327 'Liu, C.' 3 0000-0002-8675-9100 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Cryo-EM structure of Omicron BA.1 RBD complexed with ConBA-998,S309 and S304Fabs' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, Z.' 1 0000-0002-3544-1389 primary 'Ju, B.' 2 0000-0003-0768-6327 primary 'Liu, C.' 3 0000-0002-8675-9100 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Heavy chain of S309 Fab' 13877.397 1 ? ? ? ? 2 polymer man 'Light chain of S309 Fab' 11444.677 1 ? ? ? ? 3 polymer man 'Heavy chain of S304 Fab' 13074.368 1 ? ? ? ? 4 polymer man 'Light chain of S304 Fab' 11609.925 1 ? ? ? ? 5 polymer man 'Heavy chain of ConBA-998' 12721.034 1 ? ? ? ? 6 polymer man 'Spike protein S1' 20660.240 1 ? ? ? ? 7 polymer man 'Light chain of ConBA-998' 11614.658 1 ? ? ? ? 8 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose' 570.542 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;VQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYM ELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSS ; ;VQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYM ELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSS ; A ? 2 'polypeptide(L)' no no ;EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLE PEDFAVYYCQQHDTSLTFGGGTKVEIK ; ;EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLE PEDFAVYYCQQHDTSLTFGGGTKVEIK ; B ? 3 'polypeptide(L)' no no ;EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYDMHWVRQTTGKGLEWVSTIGTAGDTYYPDSVKGRFTISREDAKNSLYL QMNSLRAGDTAVYYCARGDSSGYYYYFDYWGQGTLLTVS ; ;EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYDMHWVRQTTGKGLEWVSTIGTAGDTYYPDSVKGRFTISREDAKNSLYL QMNSLRAGDTAVYYCARGDSSGYYYYFDYWGQGTLLTVS ; H ? 4 'polypeptide(L)' no no ;DIQMTQSPSSLSAAVGDRVTITCRASQSIGSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQP EDFAIYYCQQSYVSPTYTFGPGTKVDIK ; ;DIQMTQSPSSLSAAVGDRVTITCRASQSIGSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQP EDFAIYYCQQSYVSPTYTFGPGTKVDIK ; L ? 5 'polypeptide(L)' no no ;EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGDTYYPDSVQGRFTISRDNSKNTLYL QMNSLRAEDTAVYYCARSPTPPDGFDIWGQGTLVTVSS ; ;EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGDTYYPDSVQGRFTISRDNSKNTLYL QMNSLRAEDTAVYYCARSPTPPDGFDIWGQGTLVTVSS ; D ? 6 'polypeptide(L)' no no ;PFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTG NIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYG FRPTYGVGHQPYRVVVLSFEL ; ;PFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTG NIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYG FRPTYGVGHQPYRVVVLSFEL ; F ? 7 'polypeptide(L)' no no ;SYVLTQPPSVSVAPGKTARISCGGNNIGSYSAHWYQQRPGQAPVLVIYYDSDRPSGIPERFSGSNSGNTATLTISRVEAG DEADYYCQVWDSSSDHWVFGGGTKLTVL ; ;SYVLTQPPSVSVAPGKTARISCGGNNIGSYSAHWYQQRPGQAPVLVIYYDSDRPSGIPERFSGSNSGNTATLTISRVEAG DEADYYCQVWDSSSDHWVFGGGTKLTVL ; C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 GLN n 1 3 LEU n 1 4 VAL n 1 5 GLN n 1 6 SER n 1 7 GLY n 1 8 ALA n 1 9 GLU n 1 10 VAL n 1 11 LYS n 1 12 LYS n 1 13 PRO n 1 14 GLY n 1 15 ALA n 1 16 SER n 1 17 VAL n 1 18 LYS n 1 19 VAL n 1 20 SER n 1 21 CYS n 1 22 LYS n 1 23 ALA n 1 24 SER n 1 25 GLY n 1 26 TYR n 1 27 PRO n 1 28 PHE n 1 29 THR n 1 30 SER n 1 31 TYR n 1 32 GLY n 1 33 ILE n 1 34 SER n 1 35 TRP n 1 36 VAL n 1 37 ARG n 1 38 GLN n 1 39 ALA n 1 40 PRO n 1 41 GLY n 1 42 GLN n 1 43 GLY n 1 44 LEU n 1 45 GLU n 1 46 TRP n 1 47 MET n 1 48 GLY n 1 49 TRP n 1 50 ILE n 1 51 SER n 1 52 THR n 1 53 TYR n 1 54 ASN n 1 55 GLY n 1 56 ASN n 1 57 THR n 1 58 ASN n 1 59 TYR n 1 60 ALA n 1 61 GLN n 1 62 LYS n 1 63 PHE n 1 64 GLN n 1 65 GLY n 1 66 ARG n 1 67 VAL n 1 68 THR n 1 69 MET n 1 70 THR n 1 71 THR n 1 72 ASP n 1 73 THR n 1 74 SER n 1 75 THR n 1 76 THR n 1 77 THR n 1 78 GLY n 1 79 TYR n 1 80 MET n 1 81 GLU n 1 82 LEU n 1 83 ARG n 1 84 ARG n 1 85 LEU n 1 86 ARG n 1 87 SER n 1 88 ASP n 1 89 ASP n 1 90 THR n 1 91 ALA n 1 92 VAL n 1 93 TYR n 1 94 TYR n 1 95 CYS n 1 96 ALA n 1 97 ARG n 1 98 ASP n 1 99 TYR n 1 100 THR n 1 101 ARG n 1 102 GLY n 1 103 ALA n 1 104 TRP n 1 105 PHE n 1 106 GLY n 1 107 GLU n 1 108 SER n 1 109 LEU n 1 110 ILE n 1 111 GLY n 1 112 GLY n 1 113 PHE n 1 114 ASP n 1 115 ASN n 1 116 TRP n 1 117 GLY n 1 118 GLN n 1 119 GLY n 1 120 THR n 1 121 LEU n 1 122 VAL n 1 123 THR n 1 124 VAL n 1 125 SER n 1 126 SER n 2 1 GLU n 2 2 ILE n 2 3 VAL n 2 4 LEU n 2 5 THR n 2 6 GLN n 2 7 SER n 2 8 PRO n 2 9 GLY n 2 10 THR n 2 11 LEU n 2 12 SER n 2 13 LEU n 2 14 SER n 2 15 PRO n 2 16 GLY n 2 17 GLU n 2 18 ARG n 2 19 ALA n 2 20 THR n 2 21 LEU n 2 22 SER n 2 23 CYS n 2 24 ARG n 2 25 ALA n 2 26 SER n 2 27 GLN n 2 28 THR n 2 29 VAL n 2 30 SER n 2 31 SER n 2 32 THR n 2 33 SER n 2 34 LEU n 2 35 ALA n 2 36 TRP n 2 37 TYR n 2 38 GLN n 2 39 GLN n 2 40 LYS n 2 41 PRO n 2 42 GLY n 2 43 GLN n 2 44 ALA n 2 45 PRO n 2 46 ARG n 2 47 LEU n 2 48 LEU n 2 49 ILE n 2 50 TYR n 2 51 GLY n 2 52 ALA n 2 53 SER n 2 54 SER n 2 55 ARG n 2 56 ALA n 2 57 THR n 2 58 GLY n 2 59 ILE n 2 60 PRO n 2 61 ASP n 2 62 ARG n 2 63 PHE n 2 64 SER n 2 65 GLY n 2 66 SER n 2 67 GLY n 2 68 SER n 2 69 GLY n 2 70 THR n 2 71 ASP n 2 72 PHE n 2 73 THR n 2 74 LEU n 2 75 THR n 2 76 ILE n 2 77 SER n 2 78 ARG n 2 79 LEU n 2 80 GLU n 2 81 PRO n 2 82 GLU n 2 83 ASP n 2 84 PHE n 2 85 ALA n 2 86 VAL n 2 87 TYR n 2 88 TYR n 2 89 CYS n 2 90 GLN n 2 91 GLN n 2 92 HIS n 2 93 ASP n 2 94 THR n 2 95 SER n 2 96 LEU n 2 97 THR n 2 98 PHE n 2 99 GLY n 2 100 GLY n 2 101 GLY n 2 102 THR n 2 103 LYS n 2 104 VAL n 2 105 GLU n 2 106 ILE n 2 107 LYS n 3 1 GLU n 3 2 VAL n 3 3 GLN n 3 4 LEU n 3 5 VAL n 3 6 GLU n 3 7 SER n 3 8 GLY n 3 9 GLY n 3 10 GLY n 3 11 LEU n 3 12 VAL n 3 13 GLN n 3 14 PRO n 3 15 GLY n 3 16 GLY n 3 17 SER n 3 18 LEU n 3 19 ARG n 3 20 LEU n 3 21 SER n 3 22 CYS n 3 23 ALA n 3 24 ALA n 3 25 SER n 3 26 GLY n 3 27 PHE n 3 28 THR n 3 29 PHE n 3 30 SER n 3 31 SER n 3 32 TYR n 3 33 ASP n 3 34 MET n 3 35 HIS n 3 36 TRP n 3 37 VAL n 3 38 ARG n 3 39 GLN n 3 40 THR n 3 41 THR n 3 42 GLY n 3 43 LYS n 3 44 GLY n 3 45 LEU n 3 46 GLU n 3 47 TRP n 3 48 VAL n 3 49 SER n 3 50 THR n 3 51 ILE n 3 52 GLY n 3 53 THR n 3 54 ALA n 3 55 GLY n 3 56 ASP n 3 57 THR n 3 58 TYR n 3 59 TYR n 3 60 PRO n 3 61 ASP n 3 62 SER n 3 63 VAL n 3 64 LYS n 3 65 GLY n 3 66 ARG n 3 67 PHE n 3 68 THR n 3 69 ILE n 3 70 SER n 3 71 ARG n 3 72 GLU n 3 73 ASP n 3 74 ALA n 3 75 LYS n 3 76 ASN n 3 77 SER n 3 78 LEU n 3 79 TYR n 3 80 LEU n 3 81 GLN n 3 82 MET n 3 83 ASN n 3 84 SER n 3 85 LEU n 3 86 ARG n 3 87 ALA n 3 88 GLY n 3 89 ASP n 3 90 THR n 3 91 ALA n 3 92 VAL n 3 93 TYR n 3 94 TYR n 3 95 CYS n 3 96 ALA n 3 97 ARG n 3 98 GLY n 3 99 ASP n 3 100 SER n 3 101 SER n 3 102 GLY n 3 103 TYR n 3 104 TYR n 3 105 TYR n 3 106 TYR n 3 107 PHE n 3 108 ASP n 3 109 TYR n 3 110 TRP n 3 111 GLY n 3 112 GLN n 3 113 GLY n 3 114 THR n 3 115 LEU n 3 116 LEU n 3 117 THR n 3 118 VAL n 3 119 SER n 4 1 ASP n 4 2 ILE n 4 3 GLN n 4 4 MET n 4 5 THR n 4 6 GLN n 4 7 SER n 4 8 PRO n 4 9 SER n 4 10 SER n 4 11 LEU n 4 12 SER n 4 13 ALA n 4 14 ALA n 4 15 VAL n 4 16 GLY n 4 17 ASP n 4 18 ARG n 4 19 VAL n 4 20 THR n 4 21 ILE n 4 22 THR n 4 23 CYS n 4 24 ARG n 4 25 ALA n 4 26 SER n 4 27 GLN n 4 28 SER n 4 29 ILE n 4 30 GLY n 4 31 SER n 4 32 TYR n 4 33 LEU n 4 34 ASN n 4 35 TRP n 4 36 TYR n 4 37 GLN n 4 38 GLN n 4 39 LYS n 4 40 PRO n 4 41 GLY n 4 42 LYS n 4 43 ALA n 4 44 PRO n 4 45 LYS n 4 46 LEU n 4 47 LEU n 4 48 ILE n 4 49 TYR n 4 50 ALA n 4 51 ALA n 4 52 SER n 4 53 SER n 4 54 LEU n 4 55 GLN n 4 56 SER n 4 57 GLY n 4 58 VAL n 4 59 PRO n 4 60 SER n 4 61 ARG n 4 62 PHE n 4 63 SER n 4 64 GLY n 4 65 SER n 4 66 GLY n 4 67 SER n 4 68 GLY n 4 69 THR n 4 70 ASP n 4 71 PHE n 4 72 THR n 4 73 LEU n 4 74 THR n 4 75 ILE n 4 76 SER n 4 77 SER n 4 78 LEU n 4 79 GLN n 4 80 PRO n 4 81 GLU n 4 82 ASP n 4 83 PHE n 4 84 ALA n 4 85 ILE n 4 86 TYR n 4 87 TYR n 4 88 CYS n 4 89 GLN n 4 90 GLN n 4 91 SER n 4 92 TYR n 4 93 VAL n 4 94 SER n 4 95 PRO n 4 96 THR n 4 97 TYR n 4 98 THR n 4 99 PHE n 4 100 GLY n 4 101 PRO n 4 102 GLY n 4 103 THR n 4 104 LYS n 4 105 VAL n 4 106 ASP n 4 107 ILE n 4 108 LYS n 5 1 GLU n 5 2 VAL n 5 3 GLN n 5 4 LEU n 5 5 VAL n 5 6 GLU n 5 7 SER n 5 8 GLY n 5 9 GLY n 5 10 GLY n 5 11 LEU n 5 12 VAL n 5 13 GLN n 5 14 PRO n 5 15 GLY n 5 16 GLY n 5 17 SER n 5 18 LEU n 5 19 ARG n 5 20 LEU n 5 21 SER n 5 22 CYS n 5 23 ALA n 5 24 ALA n 5 25 SER n 5 26 GLY n 5 27 PHE n 5 28 THR n 5 29 VAL n 5 30 SER n 5 31 SER n 5 32 ASN n 5 33 TYR n 5 34 MET n 5 35 SER n 5 36 TRP n 5 37 VAL n 5 38 ARG n 5 39 GLN n 5 40 ALA n 5 41 PRO n 5 42 GLY n 5 43 LYS n 5 44 GLY n 5 45 LEU n 5 46 GLU n 5 47 TRP n 5 48 VAL n 5 49 SER n 5 50 VAL n 5 51 ILE n 5 52 TYR n 5 53 SER n 5 54 GLY n 5 55 GLY n 5 56 ASP n 5 57 THR n 5 58 TYR n 5 59 TYR n 5 60 PRO n 5 61 ASP n 5 62 SER n 5 63 VAL n 5 64 GLN n 5 65 GLY n 5 66 ARG n 5 67 PHE n 5 68 THR n 5 69 ILE n 5 70 SER n 5 71 ARG n 5 72 ASP n 5 73 ASN n 5 74 SER n 5 75 LYS n 5 76 ASN n 5 77 THR n 5 78 LEU n 5 79 TYR n 5 80 LEU n 5 81 GLN n 5 82 MET n 5 83 ASN n 5 84 SER n 5 85 LEU n 5 86 ARG n 5 87 ALA n 5 88 GLU n 5 89 ASP n 5 90 THR n 5 91 ALA n 5 92 VAL n 5 93 TYR n 5 94 TYR n 5 95 CYS n 5 96 ALA n 5 97 ARG n 5 98 SER n 5 99 PRO n 5 100 THR n 5 101 PRO n 5 102 PRO n 5 103 ASP n 5 104 GLY n 5 105 PHE n 5 106 ASP n 5 107 ILE n 5 108 TRP n 5 109 GLY n 5 110 GLN n 5 111 GLY n 5 112 THR n 5 113 LEU n 5 114 VAL n 5 115 THR n 5 116 VAL n 5 117 SER n 5 118 SER n 6 1 PRO n 6 2 PHE n 6 3 ASP n 6 4 GLU n 6 5 VAL n 6 6 PHE n 6 7 ASN n 6 8 ALA n 6 9 THR n 6 10 ARG n 6 11 PHE n 6 12 ALA n 6 13 SER n 6 14 VAL n 6 15 TYR n 6 16 ALA n 6 17 TRP n 6 18 ASN n 6 19 ARG n 6 20 LYS n 6 21 ARG n 6 22 ILE n 6 23 SER n 6 24 ASN n 6 25 CYS n 6 26 VAL n 6 27 ALA n 6 28 ASP n 6 29 TYR n 6 30 SER n 6 31 VAL n 6 32 LEU n 6 33 TYR n 6 34 ASN n 6 35 PHE n 6 36 ALA n 6 37 PRO n 6 38 PHE n 6 39 PHE n 6 40 ALA n 6 41 PHE n 6 42 LYS n 6 43 CYS n 6 44 TYR n 6 45 GLY n 6 46 VAL n 6 47 SER n 6 48 PRO n 6 49 THR n 6 50 LYS n 6 51 LEU n 6 52 ASN n 6 53 ASP n 6 54 LEU n 6 55 CYS n 6 56 PHE n 6 57 THR n 6 58 ASN n 6 59 VAL n 6 60 TYR n 6 61 ALA n 6 62 ASP n 6 63 SER n 6 64 PHE n 6 65 VAL n 6 66 ILE n 6 67 ARG n 6 68 GLY n 6 69 ASN n 6 70 GLU n 6 71 VAL n 6 72 SER n 6 73 GLN n 6 74 ILE n 6 75 ALA n 6 76 PRO n 6 77 GLY n 6 78 GLN n 6 79 THR n 6 80 GLY n 6 81 ASN n 6 82 ILE n 6 83 ALA n 6 84 ASP n 6 85 TYR n 6 86 ASN n 6 87 TYR n 6 88 LYS n 6 89 LEU n 6 90 PRO n 6 91 ASP n 6 92 ASP n 6 93 PHE n 6 94 THR n 6 95 GLY n 6 96 CYS n 6 97 VAL n 6 98 ILE n 6 99 ALA n 6 100 TRP n 6 101 ASN n 6 102 SER n 6 103 ASN n 6 104 LYS n 6 105 LEU n 6 106 ASP n 6 107 SER n 6 108 LYS n 6 109 VAL n 6 110 GLY n 6 111 GLY n 6 112 ASN n 6 113 TYR n 6 114 ASN n 6 115 TYR n 6 116 LEU n 6 117 TYR n 6 118 ARG n 6 119 LEU n 6 120 PHE n 6 121 ARG n 6 122 LYS n 6 123 SER n 6 124 ASN n 6 125 LEU n 6 126 LYS n 6 127 PRO n 6 128 PHE n 6 129 GLU n 6 130 ARG n 6 131 ASP n 6 132 ILE n 6 133 SER n 6 134 THR n 6 135 GLU n 6 136 ILE n 6 137 TYR n 6 138 GLN n 6 139 ALA n 6 140 GLY n 6 141 ASN n 6 142 LYS n 6 143 PRO n 6 144 CYS n 6 145 ASN n 6 146 GLY n 6 147 VAL n 6 148 ALA n 6 149 GLY n 6 150 PHE n 6 151 ASN n 6 152 CYS n 6 153 TYR n 6 154 PHE n 6 155 PRO n 6 156 LEU n 6 157 ARG n 6 158 SER n 6 159 TYR n 6 160 GLY n 6 161 PHE n 6 162 ARG n 6 163 PRO n 6 164 THR n 6 165 TYR n 6 166 GLY n 6 167 VAL n 6 168 GLY n 6 169 HIS n 6 170 GLN n 6 171 PRO n 6 172 TYR n 6 173 ARG n 6 174 VAL n 6 175 VAL n 6 176 VAL n 6 177 LEU n 6 178 SER n 6 179 PHE n 6 180 GLU n 6 181 LEU n 7 1 SER n 7 2 TYR n 7 3 VAL n 7 4 LEU n 7 5 THR n 7 6 GLN n 7 7 PRO n 7 8 PRO n 7 9 SER n 7 10 VAL n 7 11 SER n 7 12 VAL n 7 13 ALA n 7 14 PRO n 7 15 GLY n 7 16 LYS n 7 17 THR n 7 18 ALA n 7 19 ARG n 7 20 ILE n 7 21 SER n 7 22 CYS n 7 23 GLY n 7 24 GLY n 7 25 ASN n 7 26 ASN n 7 27 ILE n 7 28 GLY n 7 29 SER n 7 30 TYR n 7 31 SER n 7 32 ALA n 7 33 HIS n 7 34 TRP n 7 35 TYR n 7 36 GLN n 7 37 GLN n 7 38 ARG n 7 39 PRO n 7 40 GLY n 7 41 GLN n 7 42 ALA n 7 43 PRO n 7 44 VAL n 7 45 LEU n 7 46 VAL n 7 47 ILE n 7 48 TYR n 7 49 TYR n 7 50 ASP n 7 51 SER n 7 52 ASP n 7 53 ARG n 7 54 PRO n 7 55 SER n 7 56 GLY n 7 57 ILE n 7 58 PRO n 7 59 GLU n 7 60 ARG n 7 61 PHE n 7 62 SER n 7 63 GLY n 7 64 SER n 7 65 ASN n 7 66 SER n 7 67 GLY n 7 68 ASN n 7 69 THR n 7 70 ALA n 7 71 THR n 7 72 LEU n 7 73 THR n 7 74 ILE n 7 75 SER n 7 76 ARG n 7 77 VAL n 7 78 GLU n 7 79 ALA n 7 80 GLY n 7 81 ASP n 7 82 GLU n 7 83 ALA n 7 84 ASP n 7 85 TYR n 7 86 TYR n 7 87 CYS n 7 88 GLN n 7 89 VAL n 7 90 TRP n 7 91 ASP n 7 92 SER n 7 93 SER n 7 94 SER n 7 95 ASP n 7 96 HIS n 7 97 TRP n 7 98 VAL n 7 99 PHE n 7 100 GLY n 7 101 GLY n 7 102 GLY n 7 103 THR n 7 104 LYS n 7 105 LEU n 7 106 THR n 7 107 VAL n 7 108 LEU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 126 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 107 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 119 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample 'Biological sequence' 1 108 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 5 1 sample 'Biological sequence' 1 118 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 6 1 sample 'Biological sequence' 1 181 '2019-nCoV, SARS-CoV-2' ? 'S, 2' ? 'BA.1, Omicron' ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 7 1 sample 'Biological sequence' 1 108 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_branch.entity_id 8 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 8 'DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-ROH' 'Glycam Condensed Sequence' GMML 1.0 2 8 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-1-2/a4-b1_a6-c1' WURCS PDB2Glycan 1.1.0 3 8 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}[(6+1)][a-L-Fucp]{}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 8 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 8 3 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 2 2 VAL VAL A . n A 1 2 GLN 2 3 3 GLN GLN A . n A 1 3 LEU 3 4 4 LEU LEU A . n A 1 4 VAL 4 5 5 VAL VAL A . n A 1 5 GLN 5 6 6 GLN GLN A . n A 1 6 SER 6 7 7 SER SER A . n A 1 7 GLY 7 8 8 GLY GLY A . n A 1 8 ALA 8 9 9 ALA ALA A . n A 1 9 GLU 9 10 10 GLU GLU A . n A 1 10 VAL 10 11 11 VAL VAL A . n A 1 11 LYS 11 12 12 LYS LYS A . n A 1 12 LYS 12 13 13 LYS LYS A . n A 1 13 PRO 13 14 14 PRO PRO A . n A 1 14 GLY 14 15 15 GLY GLY A . n A 1 15 ALA 15 16 16 ALA ALA A . n A 1 16 SER 16 17 17 SER SER A . n A 1 17 VAL 17 18 18 VAL VAL A . n A 1 18 LYS 18 19 19 LYS LYS A . n A 1 19 VAL 19 20 20 VAL VAL A . n A 1 20 SER 20 21 21 SER SER A . n A 1 21 CYS 21 22 22 CYS CYS A . n A 1 22 LYS 22 23 23 LYS LYS A . n A 1 23 ALA 23 24 24 ALA ALA A . n A 1 24 SER 24 25 25 SER SER A . n A 1 25 GLY 25 26 26 GLY GLY A . n A 1 26 TYR 26 27 27 TYR TYR A . n A 1 27 PRO 27 28 28 PRO PRO A . n A 1 28 PHE 28 29 29 PHE PHE A . n A 1 29 THR 29 30 30 THR THR A . n A 1 30 SER 30 31 31 SER SER A . n A 1 31 TYR 31 32 32 TYR TYR A . n A 1 32 GLY 32 33 33 GLY GLY A . n A 1 33 ILE 33 34 34 ILE ILE A . n A 1 34 SER 34 35 35 SER SER A . n A 1 35 TRP 35 36 36 TRP TRP A . n A 1 36 VAL 36 37 37 VAL VAL A . n A 1 37 ARG 37 38 38 ARG ARG A . n A 1 38 GLN 38 39 39 GLN GLN A . n A 1 39 ALA 39 40 40 ALA ALA A . n A 1 40 PRO 40 41 41 PRO PRO A . n A 1 41 GLY 41 42 42 GLY GLY A . n A 1 42 GLN 42 43 43 GLN GLN A . n A 1 43 GLY 43 44 44 GLY GLY A . n A 1 44 LEU 44 45 45 LEU LEU A . n A 1 45 GLU 45 46 46 GLU GLU A . n A 1 46 TRP 46 47 47 TRP TRP A . n A 1 47 MET 47 48 48 MET MET A . n A 1 48 GLY 48 49 49 GLY GLY A . n A 1 49 TRP 49 50 50 TRP TRP A . n A 1 50 ILE 50 51 51 ILE ILE A . n A 1 51 SER 51 52 52 SER SER A . n A 1 52 THR 52 53 53 THR THR A . n A 1 53 TYR 53 54 54 TYR TYR A . n A 1 54 ASN 54 55 55 ASN ASN A . n A 1 55 GLY 55 56 56 GLY GLY A . n A 1 56 ASN 56 57 57 ASN ASN A . n A 1 57 THR 57 58 58 THR THR A . n A 1 58 ASN 58 59 59 ASN ASN A . n A 1 59 TYR 59 60 60 TYR TYR A . n A 1 60 ALA 60 61 61 ALA ALA A . n A 1 61 GLN 61 62 62 GLN GLN A . n A 1 62 LYS 62 63 63 LYS LYS A . n A 1 63 PHE 63 64 64 PHE PHE A . n A 1 64 GLN 64 65 65 GLN GLN A . n A 1 65 GLY 65 66 66 GLY GLY A . n A 1 66 ARG 66 67 67 ARG ARG A . n A 1 67 VAL 67 68 68 VAL VAL A . n A 1 68 THR 68 69 69 THR THR A . n A 1 69 MET 69 70 70 MET MET A . n A 1 70 THR 70 71 71 THR THR A . n A 1 71 THR 71 72 72 THR THR A . n A 1 72 ASP 72 73 73 ASP ASP A . n A 1 73 THR 73 74 74 THR THR A . n A 1 74 SER 74 75 75 SER SER A . n A 1 75 THR 75 76 76 THR THR A . n A 1 76 THR 76 77 77 THR THR A . n A 1 77 THR 77 78 78 THR THR A . n A 1 78 GLY 78 79 79 GLY GLY A . n A 1 79 TYR 79 80 80 TYR TYR A . n A 1 80 MET 80 81 81 MET MET A . n A 1 81 GLU 81 82 82 GLU GLU A . n A 1 82 LEU 82 83 83 LEU LEU A . n A 1 83 ARG 83 84 84 ARG ARG A . n A 1 84 ARG 84 85 85 ARG ARG A . n A 1 85 LEU 85 86 86 LEU LEU A . n A 1 86 ARG 86 87 87 ARG ARG A . n A 1 87 SER 87 88 88 SER SER A . n A 1 88 ASP 88 89 89 ASP ASP A . n A 1 89 ASP 89 90 90 ASP ASP A . n A 1 90 THR 90 91 91 THR THR A . n A 1 91 ALA 91 92 92 ALA ALA A . n A 1 92 VAL 92 93 93 VAL VAL A . n A 1 93 TYR 93 94 94 TYR TYR A . n A 1 94 TYR 94 95 95 TYR TYR A . n A 1 95 CYS 95 96 96 CYS CYS A . n A 1 96 ALA 96 97 97 ALA ALA A . n A 1 97 ARG 97 98 98 ARG ARG A . n A 1 98 ASP 98 99 99 ASP ASP A . n A 1 99 TYR 99 100 100 TYR TYR A . n A 1 100 THR 100 101 101 THR THR A . n A 1 101 ARG 101 102 102 ARG ARG A . n A 1 102 GLY 102 103 103 GLY GLY A . n A 1 103 ALA 103 104 104 ALA ALA A . n A 1 104 TRP 104 105 105 TRP TRP A . n A 1 105 PHE 105 106 106 PHE PHE A . n A 1 106 GLY 106 107 107 GLY GLY A . n A 1 107 GLU 107 108 108 GLU GLU A . n A 1 108 SER 108 109 109 SER SER A . n A 1 109 LEU 109 110 110 LEU LEU A . n A 1 110 ILE 110 111 111 ILE ILE A . n A 1 111 GLY 111 112 112 GLY GLY A . n A 1 112 GLY 112 113 113 GLY GLY A . n A 1 113 PHE 113 114 114 PHE PHE A . n A 1 114 ASP 114 115 115 ASP ASP A . n A 1 115 ASN 115 116 116 ASN ASN A . n A 1 116 TRP 116 117 117 TRP TRP A . n A 1 117 GLY 117 118 118 GLY GLY A . n A 1 118 GLN 118 119 119 GLN GLN A . n A 1 119 GLY 119 120 120 GLY GLY A . n A 1 120 THR 120 121 121 THR THR A . n A 1 121 LEU 121 122 122 LEU LEU A . n A 1 122 VAL 122 123 123 VAL VAL A . n A 1 123 THR 123 124 124 THR THR A . n A 1 124 VAL 124 125 125 VAL VAL A . n A 1 125 SER 125 126 126 SER SER A . n A 1 126 SER 126 127 127 SER SER A . n B 2 1 GLU 1 1 1 GLU GLU B . n B 2 2 ILE 2 2 2 ILE ILE B . n B 2 3 VAL 3 3 3 VAL VAL B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 THR 5 5 5 THR THR B . n B 2 6 GLN 6 6 6 GLN GLN B . n B 2 7 SER 7 7 7 SER SER B . n B 2 8 PRO 8 8 8 PRO PRO B . n B 2 9 GLY 9 9 9 GLY GLY B . n B 2 10 THR 10 10 10 THR THR B . n B 2 11 LEU 11 11 11 LEU LEU B . n B 2 12 SER 12 12 12 SER SER B . n B 2 13 LEU 13 13 13 LEU LEU B . n B 2 14 SER 14 14 14 SER SER B . n B 2 15 PRO 15 15 15 PRO PRO B . n B 2 16 GLY 16 16 16 GLY GLY B . n B 2 17 GLU 17 17 17 GLU GLU B . n B 2 18 ARG 18 18 18 ARG ARG B . n B 2 19 ALA 19 19 19 ALA ALA B . n B 2 20 THR 20 20 20 THR THR B . n B 2 21 LEU 21 21 21 LEU LEU B . n B 2 22 SER 22 22 22 SER SER B . n B 2 23 CYS 23 23 23 CYS CYS B . n B 2 24 ARG 24 24 24 ARG ARG B . n B 2 25 ALA 25 25 25 ALA ALA B . n B 2 26 SER 26 26 26 SER SER B . n B 2 27 GLN 27 27 27 GLN GLN B . n B 2 28 THR 28 28 28 THR THR B . n B 2 29 VAL 29 29 29 VAL VAL B . n B 2 30 SER 30 30 30 SER SER B . n B 2 31 SER 31 31 31 SER SER B . n B 2 32 THR 32 32 32 THR THR B . n B 2 33 SER 33 33 33 SER SER B . n B 2 34 LEU 34 34 34 LEU LEU B . n B 2 35 ALA 35 35 35 ALA ALA B . n B 2 36 TRP 36 36 36 TRP TRP B . n B 2 37 TYR 37 37 37 TYR TYR B . n B 2 38 GLN 38 38 38 GLN GLN B . n B 2 39 GLN 39 39 39 GLN GLN B . n B 2 40 LYS 40 40 40 LYS LYS B . n B 2 41 PRO 41 41 41 PRO PRO B . n B 2 42 GLY 42 42 42 GLY GLY B . n B 2 43 GLN 43 43 43 GLN GLN B . n B 2 44 ALA 44 44 44 ALA ALA B . n B 2 45 PRO 45 45 45 PRO PRO B . n B 2 46 ARG 46 46 46 ARG ARG B . n B 2 47 LEU 47 47 47 LEU LEU B . n B 2 48 LEU 48 48 48 LEU LEU B . n B 2 49 ILE 49 49 49 ILE ILE B . n B 2 50 TYR 50 50 50 TYR TYR B . n B 2 51 GLY 51 51 51 GLY GLY B . n B 2 52 ALA 52 52 52 ALA ALA B . n B 2 53 SER 53 53 53 SER SER B . n B 2 54 SER 54 54 54 SER SER B . n B 2 55 ARG 55 55 55 ARG ARG B . n B 2 56 ALA 56 56 56 ALA ALA B . n B 2 57 THR 57 57 57 THR THR B . n B 2 58 GLY 58 58 58 GLY GLY B . n B 2 59 ILE 59 59 59 ILE ILE B . n B 2 60 PRO 60 60 60 PRO PRO B . n B 2 61 ASP 61 61 61 ASP ASP B . n B 2 62 ARG 62 62 62 ARG ARG B . n B 2 63 PHE 63 63 63 PHE PHE B . n B 2 64 SER 64 64 64 SER SER B . n B 2 65 GLY 65 65 65 GLY GLY B . n B 2 66 SER 66 66 66 SER SER B . n B 2 67 GLY 67 67 67 GLY GLY B . n B 2 68 SER 68 68 68 SER SER B . n B 2 69 GLY 69 69 69 GLY GLY B . n B 2 70 THR 70 70 70 THR THR B . n B 2 71 ASP 71 71 71 ASP ASP B . n B 2 72 PHE 72 72 72 PHE PHE B . n B 2 73 THR 73 73 73 THR THR B . n B 2 74 LEU 74 74 74 LEU LEU B . n B 2 75 THR 75 75 75 THR THR B . n B 2 76 ILE 76 76 76 ILE ILE B . n B 2 77 SER 77 77 77 SER SER B . n B 2 78 ARG 78 78 78 ARG ARG B . n B 2 79 LEU 79 79 79 LEU LEU B . n B 2 80 GLU 80 80 80 GLU GLU B . n B 2 81 PRO 81 81 81 PRO PRO B . n B 2 82 GLU 82 82 82 GLU GLU B . n B 2 83 ASP 83 83 83 ASP ASP B . n B 2 84 PHE 84 84 84 PHE PHE B . n B 2 85 ALA 85 85 85 ALA ALA B . n B 2 86 VAL 86 86 86 VAL VAL B . n B 2 87 TYR 87 87 87 TYR TYR B . n B 2 88 TYR 88 88 88 TYR TYR B . n B 2 89 CYS 89 89 89 CYS CYS B . n B 2 90 GLN 90 90 90 GLN GLN B . n B 2 91 GLN 91 91 91 GLN GLN B . n B 2 92 HIS 92 92 92 HIS HIS B . n B 2 93 ASP 93 93 93 ASP ASP B . n B 2 94 THR 94 94 94 THR THR B . n B 2 95 SER 95 95 95 SER SER B . n B 2 96 LEU 96 96 96 LEU LEU B . n B 2 97 THR 97 97 97 THR THR B . n B 2 98 PHE 98 98 98 PHE PHE B . n B 2 99 GLY 99 99 99 GLY GLY B . n B 2 100 GLY 100 100 100 GLY GLY B . n B 2 101 GLY 101 101 101 GLY GLY B . n B 2 102 THR 102 102 102 THR THR B . n B 2 103 LYS 103 103 103 LYS LYS B . n B 2 104 VAL 104 104 104 VAL VAL B . n B 2 105 GLU 105 105 105 GLU GLU B . n B 2 106 ILE 106 106 106 ILE ILE B . n B 2 107 LYS 107 107 107 LYS LYS B . n C 3 1 GLU 1 1 1 GLU GLU H . n C 3 2 VAL 2 2 2 VAL VAL H . n C 3 3 GLN 3 3 3 GLN GLN H . n C 3 4 LEU 4 4 4 LEU LEU H . n C 3 5 VAL 5 5 5 VAL VAL H . n C 3 6 GLU 6 6 6 GLU GLU H . n C 3 7 SER 7 7 7 SER SER H . n C 3 8 GLY 8 8 8 GLY GLY H . n C 3 9 GLY 9 9 9 GLY GLY H . n C 3 10 GLY 10 10 10 GLY GLY H . n C 3 11 LEU 11 11 11 LEU LEU H . n C 3 12 VAL 12 12 12 VAL VAL H . n C 3 13 GLN 13 13 13 GLN GLN H . n C 3 14 PRO 14 14 14 PRO PRO H . n C 3 15 GLY 15 15 15 GLY GLY H . n C 3 16 GLY 16 16 16 GLY GLY H . n C 3 17 SER 17 17 17 SER SER H . n C 3 18 LEU 18 18 18 LEU LEU H . n C 3 19 ARG 19 19 19 ARG ARG H . n C 3 20 LEU 20 20 20 LEU LEU H . n C 3 21 SER 21 21 21 SER SER H . n C 3 22 CYS 22 22 22 CYS CYS H . n C 3 23 ALA 23 23 23 ALA ALA H . n C 3 24 ALA 24 24 24 ALA ALA H . n C 3 25 SER 25 25 25 SER SER H . n C 3 26 GLY 26 26 26 GLY GLY H . n C 3 27 PHE 27 27 27 PHE PHE H . n C 3 28 THR 28 28 28 THR THR H . n C 3 29 PHE 29 29 29 PHE PHE H . n C 3 30 SER 30 30 30 SER SER H . n C 3 31 SER 31 31 31 SER SER H . n C 3 32 TYR 32 32 32 TYR TYR H . n C 3 33 ASP 33 33 33 ASP ASP H . n C 3 34 MET 34 34 34 MET MET H . n C 3 35 HIS 35 35 35 HIS HIS H . n C 3 36 TRP 36 36 36 TRP TRP H . n C 3 37 VAL 37 37 37 VAL VAL H . n C 3 38 ARG 38 38 38 ARG ARG H . n C 3 39 GLN 39 39 39 GLN GLN H . n C 3 40 THR 40 40 40 THR THR H . n C 3 41 THR 41 41 41 THR THR H . n C 3 42 GLY 42 42 42 GLY GLY H . n C 3 43 LYS 43 43 43 LYS LYS H . n C 3 44 GLY 44 44 44 GLY GLY H . n C 3 45 LEU 45 45 45 LEU LEU H . n C 3 46 GLU 46 46 46 GLU GLU H . n C 3 47 TRP 47 47 47 TRP TRP H . n C 3 48 VAL 48 48 48 VAL VAL H . n C 3 49 SER 49 49 49 SER SER H . n C 3 50 THR 50 50 50 THR THR H . n C 3 51 ILE 51 51 51 ILE ILE H . n C 3 52 GLY 52 52 52 GLY GLY H . n C 3 53 THR 53 53 53 THR THR H . n C 3 54 ALA 54 54 54 ALA ALA H . n C 3 55 GLY 55 55 55 GLY GLY H . n C 3 56 ASP 56 56 56 ASP ASP H . n C 3 57 THR 57 57 57 THR THR H . n C 3 58 TYR 58 58 58 TYR TYR H . n C 3 59 TYR 59 59 59 TYR TYR H . n C 3 60 PRO 60 60 60 PRO PRO H . n C 3 61 ASP 61 61 61 ASP ASP H . n C 3 62 SER 62 62 62 SER SER H . n C 3 63 VAL 63 63 63 VAL VAL H . n C 3 64 LYS 64 64 64 LYS LYS H . n C 3 65 GLY 65 65 65 GLY GLY H . n C 3 66 ARG 66 66 66 ARG ARG H . n C 3 67 PHE 67 67 67 PHE PHE H . n C 3 68 THR 68 68 68 THR THR H . n C 3 69 ILE 69 69 69 ILE ILE H . n C 3 70 SER 70 70 70 SER SER H . n C 3 71 ARG 71 71 71 ARG ARG H . n C 3 72 GLU 72 72 72 GLU GLU H . n C 3 73 ASP 73 73 73 ASP ASP H . n C 3 74 ALA 74 74 74 ALA ALA H . n C 3 75 LYS 75 75 75 LYS LYS H . n C 3 76 ASN 76 76 76 ASN ASN H . n C 3 77 SER 77 77 77 SER SER H . n C 3 78 LEU 78 78 78 LEU LEU H . n C 3 79 TYR 79 79 79 TYR TYR H . n C 3 80 LEU 80 80 80 LEU LEU H . n C 3 81 GLN 81 81 81 GLN GLN H . n C 3 82 MET 82 82 82 MET MET H . n C 3 83 ASN 83 83 83 ASN ASN H . n C 3 84 SER 84 84 84 SER SER H . n C 3 85 LEU 85 85 85 LEU LEU H . n C 3 86 ARG 86 86 86 ARG ARG H . n C 3 87 ALA 87 87 87 ALA ALA H . n C 3 88 GLY 88 88 88 GLY GLY H . n C 3 89 ASP 89 89 89 ASP ASP H . n C 3 90 THR 90 90 90 THR THR H . n C 3 91 ALA 91 91 91 ALA ALA H . n C 3 92 VAL 92 92 92 VAL VAL H . n C 3 93 TYR 93 93 93 TYR TYR H . n C 3 94 TYR 94 94 94 TYR TYR H . n C 3 95 CYS 95 95 95 CYS CYS H . n C 3 96 ALA 96 96 96 ALA ALA H . n C 3 97 ARG 97 97 97 ARG ARG H . n C 3 98 GLY 98 98 98 GLY GLY H . n C 3 99 ASP 99 99 99 ASP ASP H . n C 3 100 SER 100 100 100 SER SER H . n C 3 101 SER 101 101 101 SER SER H . n C 3 102 GLY 102 102 102 GLY GLY H . n C 3 103 TYR 103 103 103 TYR TYR H . n C 3 104 TYR 104 104 104 TYR TYR H . n C 3 105 TYR 105 105 105 TYR TYR H . n C 3 106 TYR 106 106 106 TYR TYR H . n C 3 107 PHE 107 107 107 PHE PHE H . n C 3 108 ASP 108 108 108 ASP ASP H . n C 3 109 TYR 109 109 109 TYR TYR H . n C 3 110 TRP 110 110 110 TRP TRP H . n C 3 111 GLY 111 111 111 GLY GLY H . n C 3 112 GLN 112 112 112 GLN GLN H . n C 3 113 GLY 113 113 113 GLY GLY H . n C 3 114 THR 114 114 114 THR THR H . n C 3 115 LEU 115 115 115 LEU LEU H . n C 3 116 LEU 116 116 116 LEU LEU H . n C 3 117 THR 117 117 117 THR THR H . n C 3 118 VAL 118 118 118 VAL VAL H . n C 3 119 SER 119 119 119 SER SER H . n D 4 1 ASP 1 1 1 ASP ASP L . n D 4 2 ILE 2 2 2 ILE ILE L . n D 4 3 GLN 3 3 3 GLN GLN L . n D 4 4 MET 4 4 4 MET MET L . n D 4 5 THR 5 5 5 THR THR L . n D 4 6 GLN 6 6 6 GLN GLN L . n D 4 7 SER 7 7 7 SER SER L . n D 4 8 PRO 8 8 8 PRO PRO L . n D 4 9 SER 9 9 9 SER SER L . n D 4 10 SER 10 10 10 SER SER L . n D 4 11 LEU 11 11 11 LEU LEU L . n D 4 12 SER 12 12 12 SER SER L . n D 4 13 ALA 13 13 13 ALA ALA L . n D 4 14 ALA 14 14 14 ALA ALA L . n D 4 15 VAL 15 15 15 VAL VAL L . n D 4 16 GLY 16 16 16 GLY GLY L . n D 4 17 ASP 17 17 17 ASP ASP L . n D 4 18 ARG 18 18 18 ARG ARG L . n D 4 19 VAL 19 19 19 VAL VAL L . n D 4 20 THR 20 20 20 THR THR L . n D 4 21 ILE 21 21 21 ILE ILE L . n D 4 22 THR 22 22 22 THR THR L . n D 4 23 CYS 23 23 23 CYS CYS L . n D 4 24 ARG 24 24 24 ARG ARG L . n D 4 25 ALA 25 25 25 ALA ALA L . n D 4 26 SER 26 26 26 SER SER L . n D 4 27 GLN 27 27 27 GLN GLN L . n D 4 28 SER 28 28 28 SER SER L . n D 4 29 ILE 29 29 29 ILE ILE L . n D 4 30 GLY 30 30 30 GLY GLY L . n D 4 31 SER 31 31 31 SER SER L . n D 4 32 TYR 32 32 32 TYR TYR L . n D 4 33 LEU 33 33 33 LEU LEU L . n D 4 34 ASN 34 34 34 ASN ASN L . n D 4 35 TRP 35 35 35 TRP TRP L . n D 4 36 TYR 36 36 36 TYR TYR L . n D 4 37 GLN 37 37 37 GLN GLN L . n D 4 38 GLN 38 38 38 GLN GLN L . n D 4 39 LYS 39 39 39 LYS LYS L . n D 4 40 PRO 40 40 40 PRO PRO L . n D 4 41 GLY 41 41 41 GLY GLY L . n D 4 42 LYS 42 42 42 LYS LYS L . n D 4 43 ALA 43 43 43 ALA ALA L . n D 4 44 PRO 44 44 44 PRO PRO L . n D 4 45 LYS 45 45 45 LYS LYS L . n D 4 46 LEU 46 46 46 LEU LEU L . n D 4 47 LEU 47 47 47 LEU LEU L . n D 4 48 ILE 48 48 48 ILE ILE L . n D 4 49 TYR 49 49 49 TYR TYR L . n D 4 50 ALA 50 50 50 ALA ALA L . n D 4 51 ALA 51 51 51 ALA ALA L . n D 4 52 SER 52 52 52 SER SER L . n D 4 53 SER 53 53 53 SER SER L . n D 4 54 LEU 54 54 54 LEU LEU L . n D 4 55 GLN 55 55 55 GLN GLN L . n D 4 56 SER 56 56 56 SER SER L . n D 4 57 GLY 57 57 57 GLY GLY L . n D 4 58 VAL 58 58 58 VAL VAL L . n D 4 59 PRO 59 59 59 PRO PRO L . n D 4 60 SER 60 60 60 SER SER L . n D 4 61 ARG 61 61 61 ARG ARG L . n D 4 62 PHE 62 62 62 PHE PHE L . n D 4 63 SER 63 63 63 SER SER L . n D 4 64 GLY 64 64 64 GLY GLY L . n D 4 65 SER 65 65 65 SER SER L . n D 4 66 GLY 66 66 66 GLY GLY L . n D 4 67 SER 67 67 67 SER SER L . n D 4 68 GLY 68 68 68 GLY GLY L . n D 4 69 THR 69 69 69 THR THR L . n D 4 70 ASP 70 70 70 ASP ASP L . n D 4 71 PHE 71 71 71 PHE PHE L . n D 4 72 THR 72 72 72 THR THR L . n D 4 73 LEU 73 73 73 LEU LEU L . n D 4 74 THR 74 74 74 THR THR L . n D 4 75 ILE 75 75 75 ILE ILE L . n D 4 76 SER 76 76 76 SER SER L . n D 4 77 SER 77 77 77 SER SER L . n D 4 78 LEU 78 78 78 LEU LEU L . n D 4 79 GLN 79 79 79 GLN GLN L . n D 4 80 PRO 80 80 80 PRO PRO L . n D 4 81 GLU 81 81 81 GLU GLU L . n D 4 82 ASP 82 82 82 ASP ASP L . n D 4 83 PHE 83 83 83 PHE PHE L . n D 4 84 ALA 84 84 84 ALA ALA L . n D 4 85 ILE 85 85 85 ILE ILE L . n D 4 86 TYR 86 86 86 TYR TYR L . n D 4 87 TYR 87 87 87 TYR TYR L . n D 4 88 CYS 88 88 88 CYS CYS L . n D 4 89 GLN 89 89 89 GLN GLN L . n D 4 90 GLN 90 90 90 GLN GLN L . n D 4 91 SER 91 91 91 SER SER L . n D 4 92 TYR 92 92 92 TYR TYR L . n D 4 93 VAL 93 93 93 VAL VAL L . n D 4 94 SER 94 94 94 SER SER L . n D 4 95 PRO 95 95 95 PRO PRO L . n D 4 96 THR 96 96 96 THR THR L . n D 4 97 TYR 97 97 97 TYR TYR L . n D 4 98 THR 98 98 98 THR THR L . n D 4 99 PHE 99 99 99 PHE PHE L . n D 4 100 GLY 100 100 100 GLY GLY L . n D 4 101 PRO 101 101 101 PRO PRO L . n D 4 102 GLY 102 102 102 GLY GLY L . n D 4 103 THR 103 103 103 THR THR L . n D 4 104 LYS 104 104 104 LYS LYS L . n D 4 105 VAL 105 105 105 VAL VAL L . n D 4 106 ASP 106 106 106 ASP ASP L . n D 4 107 ILE 107 107 107 ILE ILE L . n D 4 108 LYS 108 108 108 LYS LYS L . n E 5 1 GLU 1 1 1 GLU GLU D . n E 5 2 VAL 2 2 2 VAL VAL D . n E 5 3 GLN 3 3 3 GLN GLN D . n E 5 4 LEU 4 4 4 LEU LEU D . n E 5 5 VAL 5 5 5 VAL VAL D . n E 5 6 GLU 6 6 6 GLU GLU D . n E 5 7 SER 7 7 7 SER SER D . n E 5 8 GLY 8 8 8 GLY GLY D . n E 5 9 GLY 9 9 9 GLY GLY D . n E 5 10 GLY 10 10 10 GLY GLY D . n E 5 11 LEU 11 11 11 LEU LEU D . n E 5 12 VAL 12 12 12 VAL VAL D . n E 5 13 GLN 13 13 13 GLN GLN D . n E 5 14 PRO 14 14 14 PRO PRO D . n E 5 15 GLY 15 15 15 GLY GLY D . n E 5 16 GLY 16 16 16 GLY GLY D . n E 5 17 SER 17 17 17 SER SER D . n E 5 18 LEU 18 18 18 LEU LEU D . n E 5 19 ARG 19 19 19 ARG ARG D . n E 5 20 LEU 20 20 20 LEU LEU D . n E 5 21 SER 21 21 21 SER SER D . n E 5 22 CYS 22 22 22 CYS CYS D . n E 5 23 ALA 23 23 23 ALA ALA D . n E 5 24 ALA 24 24 24 ALA ALA D . n E 5 25 SER 25 25 25 SER SER D . n E 5 26 GLY 26 26 26 GLY GLY D . n E 5 27 PHE 27 27 27 PHE PHE D . n E 5 28 THR 28 28 28 THR THR D . n E 5 29 VAL 29 29 29 VAL VAL D . n E 5 30 SER 30 30 30 SER SER D . n E 5 31 SER 31 31 31 SER SER D . n E 5 32 ASN 32 32 32 ASN ASN D . n E 5 33 TYR 33 33 33 TYR TYR D . n E 5 34 MET 34 34 34 MET MET D . n E 5 35 SER 35 35 35 SER SER D . n E 5 36 TRP 36 36 36 TRP TRP D . n E 5 37 VAL 37 37 37 VAL VAL D . n E 5 38 ARG 38 38 38 ARG ARG D . n E 5 39 GLN 39 39 39 GLN GLN D . n E 5 40 ALA 40 40 40 ALA ALA D . n E 5 41 PRO 41 41 41 PRO PRO D . n E 5 42 GLY 42 42 42 GLY GLY D . n E 5 43 LYS 43 43 43 LYS LYS D . n E 5 44 GLY 44 44 44 GLY GLY D . n E 5 45 LEU 45 45 45 LEU LEU D . n E 5 46 GLU 46 46 46 GLU GLU D . n E 5 47 TRP 47 47 47 TRP TRP D . n E 5 48 VAL 48 48 48 VAL VAL D . n E 5 49 SER 49 49 49 SER SER D . n E 5 50 VAL 50 50 50 VAL VAL D . n E 5 51 ILE 51 51 51 ILE ILE D . n E 5 52 TYR 52 52 52 TYR TYR D . n E 5 53 SER 53 53 53 SER SER D . n E 5 54 GLY 54 54 54 GLY GLY D . n E 5 55 GLY 55 55 55 GLY GLY D . n E 5 56 ASP 56 56 56 ASP ASP D . n E 5 57 THR 57 57 57 THR THR D . n E 5 58 TYR 58 58 58 TYR TYR D . n E 5 59 TYR 59 59 59 TYR TYR D . n E 5 60 PRO 60 60 60 PRO PRO D . n E 5 61 ASP 61 61 61 ASP ASP D . n E 5 62 SER 62 62 62 SER SER D . n E 5 63 VAL 63 63 63 VAL VAL D . n E 5 64 GLN 64 64 64 GLN GLN D . n E 5 65 GLY 65 65 65 GLY GLY D . n E 5 66 ARG 66 66 66 ARG ARG D . n E 5 67 PHE 67 67 67 PHE PHE D . n E 5 68 THR 68 68 68 THR THR D . n E 5 69 ILE 69 69 69 ILE ILE D . n E 5 70 SER 70 70 70 SER SER D . n E 5 71 ARG 71 71 71 ARG ARG D . n E 5 72 ASP 72 72 72 ASP ASP D . n E 5 73 ASN 73 73 73 ASN ASN D . n E 5 74 SER 74 74 74 SER SER D . n E 5 75 LYS 75 75 75 LYS LYS D . n E 5 76 ASN 76 76 76 ASN ASN D . n E 5 77 THR 77 77 77 THR THR D . n E 5 78 LEU 78 78 78 LEU LEU D . n E 5 79 TYR 79 79 79 TYR TYR D . n E 5 80 LEU 80 80 80 LEU LEU D . n E 5 81 GLN 81 81 81 GLN GLN D . n E 5 82 MET 82 82 82 MET MET D . n E 5 83 ASN 83 83 83 ASN ASN D . n E 5 84 SER 84 84 84 SER SER D . n E 5 85 LEU 85 85 85 LEU LEU D . n E 5 86 ARG 86 86 86 ARG ARG D . n E 5 87 ALA 87 87 87 ALA ALA D . n E 5 88 GLU 88 88 88 GLU GLU D . n E 5 89 ASP 89 89 89 ASP ASP D . n E 5 90 THR 90 90 90 THR THR D . n E 5 91 ALA 91 91 91 ALA ALA D . n E 5 92 VAL 92 92 92 VAL VAL D . n E 5 93 TYR 93 93 93 TYR TYR D . n E 5 94 TYR 94 94 94 TYR TYR D . n E 5 95 CYS 95 95 95 CYS CYS D . n E 5 96 ALA 96 96 96 ALA ALA D . n E 5 97 ARG 97 97 97 ARG ARG D . n E 5 98 SER 98 98 98 SER SER D . n E 5 99 PRO 99 99 99 PRO PRO D . n E 5 100 THR 100 100 100 THR THR D . n E 5 101 PRO 101 101 101 PRO PRO D . n E 5 102 PRO 102 102 102 PRO PRO D . n E 5 103 ASP 103 103 103 ASP ASP D . n E 5 104 GLY 104 104 104 GLY GLY D . n E 5 105 PHE 105 105 105 PHE PHE D . n E 5 106 ASP 106 106 106 ASP ASP D . n E 5 107 ILE 107 107 107 ILE ILE D . n E 5 108 TRP 108 108 108 TRP TRP D . n E 5 109 GLY 109 109 109 GLY GLY D . n E 5 110 GLN 110 110 110 GLN GLN D . n E 5 111 GLY 111 111 111 GLY GLY D . n E 5 112 THR 112 112 112 THR THR D . n E 5 113 LEU 113 113 113 LEU LEU D . n E 5 114 VAL 114 114 114 VAL VAL D . n E 5 115 THR 115 115 115 THR THR D . n E 5 116 VAL 116 116 116 VAL VAL D . n E 5 117 SER 117 117 117 SER SER D . n E 5 118 SER 118 118 118 SER SER D . n F 6 1 PRO 1 337 337 PRO PRO F . n F 6 2 PHE 2 338 338 PHE PHE F . n F 6 3 ASP 3 339 339 ASP ASP F . n F 6 4 GLU 4 340 340 GLU GLU F . n F 6 5 VAL 5 341 341 VAL VAL F . n F 6 6 PHE 6 342 342 PHE PHE F . n F 6 7 ASN 7 343 343 ASN ASN F . n F 6 8 ALA 8 344 344 ALA ALA F . n F 6 9 THR 9 345 345 THR THR F . n F 6 10 ARG 10 346 346 ARG ARG F . n F 6 11 PHE 11 347 347 PHE PHE F . n F 6 12 ALA 12 348 348 ALA ALA F . n F 6 13 SER 13 349 349 SER SER F . n F 6 14 VAL 14 350 350 VAL VAL F . n F 6 15 TYR 15 351 351 TYR TYR F . n F 6 16 ALA 16 352 352 ALA ALA F . n F 6 17 TRP 17 353 353 TRP TRP F . n F 6 18 ASN 18 354 354 ASN ASN F . n F 6 19 ARG 19 355 355 ARG ARG F . n F 6 20 LYS 20 356 356 LYS LYS F . n F 6 21 ARG 21 357 357 ARG ARG F . n F 6 22 ILE 22 358 358 ILE ILE F . n F 6 23 SER 23 359 359 SER SER F . n F 6 24 ASN 24 360 360 ASN ASN F . n F 6 25 CYS 25 361 361 CYS CYS F . n F 6 26 VAL 26 362 362 VAL VAL F . n F 6 27 ALA 27 363 363 ALA ALA F . n F 6 28 ASP 28 364 364 ASP ASP F . n F 6 29 TYR 29 365 365 TYR TYR F . n F 6 30 SER 30 366 366 SER SER F . n F 6 31 VAL 31 367 367 VAL VAL F . n F 6 32 LEU 32 368 368 LEU LEU F . n F 6 33 TYR 33 369 369 TYR TYR F . n F 6 34 ASN 34 370 370 ASN ASN F . n F 6 35 PHE 35 371 371 PHE PHE F . n F 6 36 ALA 36 372 372 ALA ALA F . n F 6 37 PRO 37 373 373 PRO PRO F . n F 6 38 PHE 38 374 374 PHE PHE F . n F 6 39 PHE 39 375 375 PHE PHE F . n F 6 40 ALA 40 376 376 ALA ALA F . n F 6 41 PHE 41 377 377 PHE PHE F . n F 6 42 LYS 42 378 378 LYS LYS F . n F 6 43 CYS 43 379 379 CYS CYS F . n F 6 44 TYR 44 380 380 TYR TYR F . n F 6 45 GLY 45 381 381 GLY GLY F . n F 6 46 VAL 46 382 382 VAL VAL F . n F 6 47 SER 47 383 383 SER SER F . n F 6 48 PRO 48 384 384 PRO PRO F . n F 6 49 THR 49 385 385 THR THR F . n F 6 50 LYS 50 386 386 LYS LYS F . n F 6 51 LEU 51 387 387 LEU LEU F . n F 6 52 ASN 52 388 388 ASN ASN F . n F 6 53 ASP 53 389 389 ASP ASP F . n F 6 54 LEU 54 390 390 LEU LEU F . n F 6 55 CYS 55 391 391 CYS CYS F . n F 6 56 PHE 56 392 392 PHE PHE F . n F 6 57 THR 57 393 393 THR THR F . n F 6 58 ASN 58 394 394 ASN ASN F . n F 6 59 VAL 59 395 395 VAL VAL F . n F 6 60 TYR 60 396 396 TYR TYR F . n F 6 61 ALA 61 397 397 ALA ALA F . n F 6 62 ASP 62 398 398 ASP ASP F . n F 6 63 SER 63 399 399 SER SER F . n F 6 64 PHE 64 400 400 PHE PHE F . n F 6 65 VAL 65 401 401 VAL VAL F . n F 6 66 ILE 66 402 402 ILE ILE F . n F 6 67 ARG 67 403 403 ARG ARG F . n F 6 68 GLY 68 404 404 GLY GLY F . n F 6 69 ASN 69 405 405 ASN ASN F . n F 6 70 GLU 70 406 406 GLU GLU F . n F 6 71 VAL 71 407 407 VAL VAL F . n F 6 72 SER 72 408 408 SER SER F . n F 6 73 GLN 73 409 409 GLN GLN F . n F 6 74 ILE 74 410 410 ILE ILE F . n F 6 75 ALA 75 411 411 ALA ALA F . n F 6 76 PRO 76 412 412 PRO PRO F . n F 6 77 GLY 77 413 413 GLY GLY F . n F 6 78 GLN 78 414 414 GLN GLN F . n F 6 79 THR 79 415 415 THR THR F . n F 6 80 GLY 80 416 416 GLY GLY F . n F 6 81 ASN 81 417 417 ASN ASN F . n F 6 82 ILE 82 418 418 ILE ILE F . n F 6 83 ALA 83 419 419 ALA ALA F . n F 6 84 ASP 84 420 420 ASP ASP F . n F 6 85 TYR 85 421 421 TYR TYR F . n F 6 86 ASN 86 422 422 ASN ASN F . n F 6 87 TYR 87 423 423 TYR TYR F . n F 6 88 LYS 88 424 424 LYS LYS F . n F 6 89 LEU 89 425 425 LEU LEU F . n F 6 90 PRO 90 426 426 PRO PRO F . n F 6 91 ASP 91 427 427 ASP ASP F . n F 6 92 ASP 92 428 428 ASP ASP F . n F 6 93 PHE 93 429 429 PHE PHE F . n F 6 94 THR 94 430 430 THR THR F . n F 6 95 GLY 95 431 431 GLY GLY F . n F 6 96 CYS 96 432 432 CYS CYS F . n F 6 97 VAL 97 433 433 VAL VAL F . n F 6 98 ILE 98 434 434 ILE ILE F . n F 6 99 ALA 99 435 435 ALA ALA F . n F 6 100 TRP 100 436 436 TRP TRP F . n F 6 101 ASN 101 437 437 ASN ASN F . n F 6 102 SER 102 438 438 SER SER F . n F 6 103 ASN 103 439 439 ASN ASN F . n F 6 104 LYS 104 440 440 LYS LYS F . n F 6 105 LEU 105 441 441 LEU LEU F . n F 6 106 ASP 106 442 442 ASP ASP F . n F 6 107 SER 107 443 443 SER SER F . n F 6 108 LYS 108 444 444 LYS LYS F . n F 6 109 VAL 109 445 445 VAL VAL F . n F 6 110 GLY 110 446 446 GLY GLY F . n F 6 111 GLY 111 447 447 GLY GLY F . n F 6 112 ASN 112 448 448 ASN ASN F . n F 6 113 TYR 113 449 449 TYR TYR F . n F 6 114 ASN 114 450 450 ASN ASN F . n F 6 115 TYR 115 451 451 TYR TYR F . n F 6 116 LEU 116 452 452 LEU LEU F . n F 6 117 TYR 117 453 453 TYR TYR F . n F 6 118 ARG 118 454 454 ARG ARG F . n F 6 119 LEU 119 455 455 LEU LEU F . n F 6 120 PHE 120 456 456 PHE PHE F . n F 6 121 ARG 121 457 457 ARG ARG F . n F 6 122 LYS 122 458 458 LYS LYS F . n F 6 123 SER 123 459 459 SER SER F . n F 6 124 ASN 124 460 460 ASN ASN F . n F 6 125 LEU 125 461 461 LEU LEU F . n F 6 126 LYS 126 462 462 LYS LYS F . n F 6 127 PRO 127 463 463 PRO PRO F . n F 6 128 PHE 128 464 464 PHE PHE F . n F 6 129 GLU 129 465 465 GLU GLU F . n F 6 130 ARG 130 466 466 ARG ARG F . n F 6 131 ASP 131 467 467 ASP ASP F . n F 6 132 ILE 132 468 468 ILE ILE F . n F 6 133 SER 133 469 469 SER SER F . n F 6 134 THR 134 470 470 THR THR F . n F 6 135 GLU 135 471 471 GLU GLU F . n F 6 136 ILE 136 472 472 ILE ILE F . n F 6 137 TYR 137 473 473 TYR TYR F . n F 6 138 GLN 138 474 474 GLN GLN F . n F 6 139 ALA 139 475 475 ALA ALA F . n F 6 140 GLY 140 476 476 GLY GLY F . n F 6 141 ASN 141 477 477 ASN ASN F . n F 6 142 LYS 142 478 478 LYS LYS F . n F 6 143 PRO 143 479 479 PRO PRO F . n F 6 144 CYS 144 480 480 CYS CYS F . n F 6 145 ASN 145 481 481 ASN ASN F . n F 6 146 GLY 146 482 482 GLY GLY F . n F 6 147 VAL 147 483 483 VAL VAL F . n F 6 148 ALA 148 484 484 ALA ALA F . n F 6 149 GLY 149 485 485 GLY GLY F . n F 6 150 PHE 150 486 486 PHE PHE F . n F 6 151 ASN 151 487 487 ASN ASN F . n F 6 152 CYS 152 488 488 CYS CYS F . n F 6 153 TYR 153 489 489 TYR TYR F . n F 6 154 PHE 154 490 490 PHE PHE F . n F 6 155 PRO 155 491 491 PRO PRO F . n F 6 156 LEU 156 492 492 LEU LEU F . n F 6 157 ARG 157 493 493 ARG ARG F . n F 6 158 SER 158 494 494 SER SER F . n F 6 159 TYR 159 495 495 TYR TYR F . n F 6 160 GLY 160 496 496 GLY GLY F . n F 6 161 PHE 161 497 497 PHE PHE F . n F 6 162 ARG 162 498 498 ARG ARG F . n F 6 163 PRO 163 499 499 PRO PRO F . n F 6 164 THR 164 500 500 THR THR F . n F 6 165 TYR 165 501 501 TYR TYR F . n F 6 166 GLY 166 502 502 GLY GLY F . n F 6 167 VAL 167 503 503 VAL VAL F . n F 6 168 GLY 168 504 504 GLY GLY F . n F 6 169 HIS 169 505 505 HIS HIS F . n F 6 170 GLN 170 506 506 GLN GLN F . n F 6 171 PRO 171 507 507 PRO PRO F . n F 6 172 TYR 172 508 508 TYR TYR F . n F 6 173 ARG 173 509 509 ARG ARG F . n F 6 174 VAL 174 510 510 VAL VAL F . n F 6 175 VAL 175 511 511 VAL VAL F . n F 6 176 VAL 176 512 512 VAL VAL F . n F 6 177 LEU 177 513 513 LEU LEU F . n F 6 178 SER 178 514 514 SER SER F . n F 6 179 PHE 179 515 515 PHE PHE F . n F 6 180 GLU 180 516 516 GLU GLU F . n F 6 181 LEU 181 517 517 LEU LEU F . n G 7 1 SER 1 1 1 SER SER C . n G 7 2 TYR 2 2 2 TYR TYR C . n G 7 3 VAL 3 3 3 VAL VAL C . n G 7 4 LEU 4 4 4 LEU LEU C . n G 7 5 THR 5 5 5 THR THR C . n G 7 6 GLN 6 6 6 GLN GLN C . n G 7 7 PRO 7 7 7 PRO PRO C . n G 7 8 PRO 8 8 8 PRO PRO C . n G 7 9 SER 9 9 9 SER SER C . n G 7 10 VAL 10 10 10 VAL VAL C . n G 7 11 SER 11 11 11 SER SER C . n G 7 12 VAL 12 12 12 VAL VAL C . n G 7 13 ALA 13 13 13 ALA ALA C . n G 7 14 PRO 14 14 14 PRO PRO C . n G 7 15 GLY 15 15 15 GLY GLY C . n G 7 16 LYS 16 16 16 LYS LYS C . n G 7 17 THR 17 17 17 THR THR C . n G 7 18 ALA 18 18 18 ALA ALA C . n G 7 19 ARG 19 19 19 ARG ARG C . n G 7 20 ILE 20 20 20 ILE ILE C . n G 7 21 SER 21 21 21 SER SER C . n G 7 22 CYS 22 22 22 CYS CYS C . n G 7 23 GLY 23 23 23 GLY GLY C . n G 7 24 GLY 24 24 24 GLY GLY C . n G 7 25 ASN 25 25 25 ASN ASN C . n G 7 26 ASN 26 26 26 ASN ASN C . n G 7 27 ILE 27 27 27 ILE ILE C . n G 7 28 GLY 28 28 28 GLY GLY C . n G 7 29 SER 29 29 29 SER SER C . n G 7 30 TYR 30 30 30 TYR TYR C . n G 7 31 SER 31 31 31 SER SER C . n G 7 32 ALA 32 32 32 ALA ALA C . n G 7 33 HIS 33 33 33 HIS HIS C . n G 7 34 TRP 34 34 34 TRP TRP C . n G 7 35 TYR 35 35 35 TYR TYR C . n G 7 36 GLN 36 36 36 GLN GLN C . n G 7 37 GLN 37 37 37 GLN GLN C . n G 7 38 ARG 38 38 38 ARG ARG C . n G 7 39 PRO 39 39 39 PRO PRO C . n G 7 40 GLY 40 40 40 GLY GLY C . n G 7 41 GLN 41 41 41 GLN GLN C . n G 7 42 ALA 42 42 42 ALA ALA C . n G 7 43 PRO 43 43 43 PRO PRO C . n G 7 44 VAL 44 44 44 VAL VAL C . n G 7 45 LEU 45 45 45 LEU LEU C . n G 7 46 VAL 46 46 46 VAL VAL C . n G 7 47 ILE 47 47 47 ILE ILE C . n G 7 48 TYR 48 48 48 TYR TYR C . n G 7 49 TYR 49 49 49 TYR TYR C . n G 7 50 ASP 50 50 50 ASP ASP C . n G 7 51 SER 51 51 51 SER SER C . n G 7 52 ASP 52 52 52 ASP ASP C . n G 7 53 ARG 53 53 53 ARG ARG C . n G 7 54 PRO 54 54 54 PRO PRO C . n G 7 55 SER 55 55 55 SER SER C . n G 7 56 GLY 56 56 56 GLY GLY C . n G 7 57 ILE 57 57 57 ILE ILE C . n G 7 58 PRO 58 58 58 PRO PRO C . n G 7 59 GLU 59 59 59 GLU GLU C . n G 7 60 ARG 60 60 60 ARG ARG C . n G 7 61 PHE 61 61 61 PHE PHE C . n G 7 62 SER 62 62 62 SER SER C . n G 7 63 GLY 63 63 63 GLY GLY C . n G 7 64 SER 64 64 64 SER SER C . n G 7 65 ASN 65 65 65 ASN ASN C . n G 7 66 SER 66 66 66 SER SER C . n G 7 67 GLY 67 67 67 GLY GLY C . n G 7 68 ASN 68 68 68 ASN ASN C . n G 7 69 THR 69 69 69 THR THR C . n G 7 70 ALA 70 70 70 ALA ALA C . n G 7 71 THR 71 71 71 THR THR C . n G 7 72 LEU 72 72 72 LEU LEU C . n G 7 73 THR 73 73 73 THR THR C . n G 7 74 ILE 74 74 74 ILE ILE C . n G 7 75 SER 75 75 75 SER SER C . n G 7 76 ARG 76 76 76 ARG ARG C . n G 7 77 VAL 77 77 77 VAL VAL C . n G 7 78 GLU 78 78 78 GLU GLU C . n G 7 79 ALA 79 79 79 ALA ALA C . n G 7 80 GLY 80 80 80 GLY GLY C . n G 7 81 ASP 81 81 81 ASP ASP C . n G 7 82 GLU 82 82 82 GLU GLU C . n G 7 83 ALA 83 83 83 ALA ALA C . n G 7 84 ASP 84 84 84 ASP ASP C . n G 7 85 TYR 85 85 85 TYR TYR C . n G 7 86 TYR 86 86 86 TYR TYR C . n G 7 87 CYS 87 87 87 CYS CYS C . n G 7 88 GLN 88 88 88 GLN GLN C . n G 7 89 VAL 89 89 89 VAL VAL C . n G 7 90 TRP 90 90 90 TRP TRP C . n G 7 91 ASP 91 91 91 ASP ASP C . n G 7 92 SER 92 92 92 SER SER C . n G 7 93 SER 93 93 93 SER SER C . n G 7 94 SER 94 94 94 SER SER C . n G 7 95 ASP 95 95 95 ASP ASP C . n G 7 96 HIS 96 96 96 HIS HIS C . n G 7 97 TRP 97 97 97 TRP TRP C . n G 7 98 VAL 98 98 98 VAL VAL C . n G 7 99 PHE 99 99 99 PHE PHE C . n G 7 100 GLY 100 100 100 GLY GLY C . n G 7 101 GLY 101 101 101 GLY GLY C . n G 7 102 GLY 102 102 102 GLY GLY C . n G 7 103 THR 103 103 103 THR THR C . n G 7 104 LYS 104 104 104 LYS LYS C . n G 7 105 LEU 105 105 105 LEU LEU C . n G 7 106 THR 106 106 106 THR THR C . n G 7 107 VAL 107 107 107 VAL VAL C . n G 7 108 LEU 108 108 108 LEU LEU C . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero H 8 NAG 1 E NAG 1 E NAG 1 n H 8 NAG 2 E NAG 2 E NAG 2 n H 8 FUC 3 E FUC 3 E FUC 3 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 FUC ? ? FUC ? ? 'SUBJECT OF INVESTIGATION' ? 2 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9LBS _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9LBS _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9LBS _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9LBS _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.41 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.005 ? 6910 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.715 ? 9393 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 4.947 ? 984 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.043 ? 1011 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.007 ? 1209 ? f_plane_restr ? ? # _struct.entry_id 9LBS _struct.title 'Cryo-EM structure of Omicron BA.1 RBD complexed with ConBA-998,S309 and S304Fabs' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9LBS _struct_keywords.text 'Omicron BA.1 RBD, ConBA-998 Fab, S304 Fab, S309 Fab, VIRAL PROTEIN/IMMUNE SYSTEM, VIRAL PROTEIN-IMMUNE SYSTEM complex' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 8 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9LBS 9LBS ? 1 ? 1 2 PDB 9LBS 9LBS ? 2 ? 1 3 PDB 9LBS 9LBS ? 3 ? 1 4 PDB 9LBS 9LBS ? 4 ? 1 5 PDB 9LBS 9LBS ? 5 ? 1 6 UNP SPIKE_SARS2 P0DTC2 ? 6 ;PFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTG KIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYG FQPTNGVGYQPYRVVVLSFEL ; 337 7 PDB 9LBS 9LBS ? 7 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9LBS A 1 ? 126 ? 9LBS 2 ? 127 ? 2 127 2 2 9LBS B 1 ? 107 ? 9LBS 1 ? 107 ? 1 107 3 3 9LBS H 1 ? 119 ? 9LBS 1 ? 119 ? 1 119 4 4 9LBS L 1 ? 108 ? 9LBS 1 ? 108 ? 1 108 5 5 9LBS D 1 ? 118 ? 9LBS 1 ? 118 ? 1 118 6 6 9LBS F 1 ? 181 ? P0DTC2 337 ? 517 ? 337 517 7 7 9LBS C 1 ? 108 ? 9LBS 1 ? 108 ? 1 108 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 6 9LBS ASP F 3 ? UNP P0DTC2 GLY 339 variant 339 1 6 9LBS PHE F 35 ? UNP P0DTC2 SER 371 variant 371 2 6 9LBS PRO F 37 ? UNP P0DTC2 SER 373 variant 373 3 6 9LBS PHE F 39 ? UNP P0DTC2 SER 375 variant 375 4 6 9LBS ALA F 40 ? UNP P0DTC2 THR 376 variant 376 5 6 9LBS ASN F 69 ? UNP P0DTC2 ASP 405 variant 405 6 6 9LBS SER F 72 ? UNP P0DTC2 ARG 408 variant 408 7 6 9LBS ASN F 81 ? UNP P0DTC2 LYS 417 variant 417 8 6 9LBS LYS F 104 ? UNP P0DTC2 ASN 440 variant 440 9 6 9LBS ASN F 141 ? UNP P0DTC2 SER 477 variant 477 10 6 9LBS LYS F 142 ? UNP P0DTC2 THR 478 variant 478 11 6 9LBS ALA F 148 ? UNP P0DTC2 GLU 484 variant 484 12 6 9LBS ARG F 157 ? UNP P0DTC2 GLN 493 variant 493 13 6 9LBS ARG F 162 ? UNP P0DTC2 GLN 498 variant 498 14 6 9LBS TYR F 165 ? UNP P0DTC2 ASN 501 variant 501 15 6 9LBS HIS F 169 ? UNP P0DTC2 TYR 505 variant 505 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 86 ? THR A 90 ? ARG A 87 THR A 91 5 ? 5 HELX_P HELX_P2 AA2 THR E 28 ? ASN E 32 ? THR D 28 ASN D 32 5 ? 5 HELX_P HELX_P3 AA3 ASP E 72 ? ASN E 76 ? ASP D 72 ASN D 76 5 ? 5 HELX_P HELX_P4 AA4 SER F 13 ? TRP F 17 ? SER F 349 TRP F 353 5 ? 5 HELX_P HELX_P5 AA5 ASN F 69 ? ALA F 75 ? ASN F 405 ALA F 411 5 ? 7 HELX_P HELX_P6 AA6 GLY F 80 ? TYR F 85 ? GLY F 416 TYR F 421 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 21 SG ? ? ? 1_555 A CYS 95 SG ? ? A CYS 22 A CYS 96 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 89 SG ? ? B CYS 23 B CYS 89 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf3 disulf ? ? C CYS 22 SG ? ? ? 1_555 C CYS 95 SG ? ? H CYS 22 H CYS 95 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf4 disulf ? ? D CYS 23 SG ? ? ? 1_555 D CYS 88 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf5 disulf ? ? E CYS 22 SG ? ? ? 1_555 E CYS 95 SG ? ? D CYS 22 D CYS 95 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf6 disulf ? ? F CYS 43 SG ? ? ? 1_555 F CYS 96 SG ? ? F CYS 379 F CYS 432 1_555 ? ? ? ? ? ? ? 2.010 ? ? disulf7 disulf ? ? F CYS 144 SG ? ? ? 1_555 F CYS 152 SG ? ? F CYS 480 F CYS 488 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf8 disulf ? ? G CYS 22 SG ? ? ? 1_555 G CYS 87 SG ? ? C CYS 22 C CYS 87 1_555 ? ? ? ? ? ? ? 2.031 ? ? covale1 covale one ? F ASN 7 ND2 ? ? ? 1_555 H NAG . C1 ? ? F ASN 343 E NAG 1 1_555 ? ? ? ? ? ? ? 1.435 ? N-Glycosylation covale2 covale both ? H NAG . O4 ? ? ? 1_555 H NAG . C1 ? ? E NAG 1 E NAG 2 1_555 ? ? ? ? ? ? ? 1.391 ? ? covale3 covale both ? H NAG . O6 ? ? ? 1_555 H FUC . C1 ? ? E NAG 1 E FUC 3 1_555 ? ? ? ? ? ? ? 1.403 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG H . ? ASN F 7 ? NAG E 1 ? 1_555 ASN F 343 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 CYS A 21 ? CYS A 95 ? CYS A 22 ? 1_555 CYS A 96 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 23 ? CYS B 89 ? CYS B 23 ? 1_555 CYS B 89 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS C 22 ? CYS C 95 ? CYS H 22 ? 1_555 CYS H 95 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS D 23 ? CYS D 88 ? CYS L 23 ? 1_555 CYS L 88 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS E 22 ? CYS E 95 ? CYS D 22 ? 1_555 CYS D 95 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS F 43 ? CYS F 96 ? CYS F 379 ? 1_555 CYS F 432 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS F 144 ? CYS F 152 ? CYS F 480 ? 1_555 CYS F 488 ? 1_555 SG SG . . . None 'Disulfide bridge' 9 CYS G 22 ? CYS G 87 ? CYS C 22 ? 1_555 CYS C 87 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 7 B . ? SER 7 B PRO 8 B ? PRO 8 B 1 -2.86 2 ALA 36 F . ? ALA 372 F PRO 37 F ? PRO 373 F 1 -9.28 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 5 ? AA3 ? 2 ? AA4 ? 5 ? AA5 ? 2 ? AA6 ? 2 ? AA7 ? 2 ? AA8 ? 5 ? AA9 ? 2 ? AB1 ? 2 ? AB2 ? 5 ? AB3 ? 3 ? AB4 ? 2 ? AB5 ? 5 ? AB6 ? 5 ? AB7 ? 3 ? AB8 ? 2 ? AB9 ? 2 ? AC1 ? 3 ? AC2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA8 4 5 ? anti-parallel AA9 1 2 ? anti-parallel AB1 1 2 ? anti-parallel AB2 1 2 ? parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel AB2 4 5 ? anti-parallel AB3 1 2 ? anti-parallel AB3 2 3 ? anti-parallel AB4 1 2 ? anti-parallel AB5 1 2 ? anti-parallel AB5 2 3 ? anti-parallel AB5 3 4 ? anti-parallel AB5 4 5 ? anti-parallel AB6 1 2 ? anti-parallel AB6 2 3 ? anti-parallel AB6 3 4 ? anti-parallel AB6 4 5 ? anti-parallel AB7 1 2 ? anti-parallel AB7 2 3 ? anti-parallel AB8 1 2 ? anti-parallel AB9 1 2 ? anti-parallel AC1 1 2 ? anti-parallel AC1 2 3 ? anti-parallel AC2 1 2 ? anti-parallel AC2 2 3 ? anti-parallel AC2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 2 ? GLN A 5 ? GLN A 3 GLN A 6 AA1 2 VAL A 17 ? SER A 24 ? VAL A 18 SER A 25 AA1 3 THR A 77 ? LEU A 82 ? THR A 78 LEU A 83 AA1 4 VAL A 67 ? ASP A 72 ? VAL A 68 ASP A 73 AA2 1 GLU A 9 ? LYS A 11 ? GLU A 10 LYS A 12 AA2 2 LEU A 121 ? VAL A 124 ? LEU A 122 VAL A 125 AA2 3 ALA A 91 ? ASP A 98 ? ALA A 92 ASP A 99 AA2 4 GLY A 32 ? ALA A 39 ? GLY A 33 ALA A 40 AA2 5 GLY A 43 ? GLY A 48 ? GLY A 44 GLY A 49 AA3 1 LEU B 4 ? THR B 5 ? LEU B 4 THR B 5 AA3 2 ARG B 24 ? ALA B 25 ? ARG B 24 ALA B 25 AA4 1 THR B 10 ? SER B 12 ? THR B 10 SER B 12 AA4 2 THR B 102 ? GLU B 105 ? THR B 102 GLU B 105 AA4 3 VAL B 86 ? TYR B 88 ? VAL B 86 TYR B 88 AA4 4 TRP B 36 ? GLN B 39 ? TRP B 36 GLN B 39 AA4 5 ARG B 46 ? ILE B 49 ? ARG B 46 ILE B 49 AA5 1 ALA B 19 ? THR B 20 ? ALA B 19 THR B 20 AA5 2 THR B 75 ? ILE B 76 ? THR B 75 ILE B 76 AA6 1 SER B 66 ? GLY B 67 ? SER B 66 GLY B 67 AA6 2 PHE B 72 ? THR B 73 ? PHE B 72 THR B 73 AA7 1 GLN B 90 ? GLN B 91 ? GLN B 90 GLN B 91 AA7 2 THR B 97 ? PHE B 98 ? THR B 97 PHE B 98 AA8 1 THR C 57 ? TYR C 58 ? THR H 57 TYR H 58 AA8 2 LEU C 45 ? ILE C 51 ? LEU H 45 ILE H 51 AA8 3 TRP C 36 ? GLN C 39 ? TRP H 36 GLN H 39 AA8 4 VAL C 92 ? CYS C 95 ? VAL H 92 CYS H 95 AA8 5 GLY C 113 ? LEU C 115 ? GLY H 113 LEU H 115 AA9 1 SER C 70 ? GLU C 72 ? SER H 70 GLU H 72 AA9 2 SER C 77 ? TYR C 79 ? SER H 77 TYR H 79 AB1 1 ARG C 97 ? SER C 100 ? ARG H 97 SER H 100 AB1 2 TYR C 105 ? ASP C 108 ? TYR H 105 ASP H 108 AB2 1 SER D 10 ? LEU D 11 ? SER L 10 LEU L 11 AB2 2 THR D 103 ? VAL D 105 ? THR L 103 VAL L 105 AB2 3 ILE D 85 ? TYR D 87 ? ILE L 85 TYR L 87 AB2 4 ASN D 34 ? GLN D 38 ? ASN L 34 GLN L 38 AB2 5 LYS D 45 ? TYR D 49 ? LYS L 45 TYR L 49 AB3 1 THR D 20 ? THR D 22 ? THR L 20 THR L 22 AB3 2 THR D 72 ? ILE D 75 ? THR L 72 ILE L 75 AB3 3 PHE D 62 ? SER D 65 ? PHE L 62 SER L 65 AB4 1 LEU E 18 ? ARG E 19 ? LEU D 18 ARG D 19 AB4 2 GLN E 81 ? MET E 82 ? GLN D 81 MET D 82 AB5 1 THR E 57 ? TYR E 58 ? THR D 57 TYR D 58 AB5 2 LEU E 45 ? ILE E 51 ? LEU D 45 ILE D 51 AB5 3 TYR E 33 ? GLN E 39 ? TYR D 33 GLN D 39 AB5 4 VAL E 92 ? SER E 98 ? VAL D 92 SER D 98 AB5 5 ILE E 107 ? TRP E 108 ? ILE D 107 TRP D 108 AB6 1 THR E 57 ? TYR E 58 ? THR D 57 TYR D 58 AB6 2 LEU E 45 ? ILE E 51 ? LEU D 45 ILE D 51 AB6 3 TYR E 33 ? GLN E 39 ? TYR D 33 GLN D 39 AB6 4 VAL E 92 ? SER E 98 ? VAL D 92 SER D 98 AB6 5 THR E 112 ? LEU E 113 ? THR D 112 LEU D 113 AB7 1 PHE F 64 ? ARG F 67 ? PHE F 400 ARG F 403 AB7 2 PRO F 171 ? LEU F 177 ? PRO F 507 LEU F 513 AB7 3 CYS F 96 ? ASN F 101 ? CYS F 432 ASN F 437 AB8 1 LEU F 116 ? TYR F 117 ? LEU F 452 TYR F 453 AB8 2 ARG F 157 ? SER F 158 ? ARG F 493 SER F 494 AB9 1 TYR F 137 ? GLN F 138 ? TYR F 473 GLN F 474 AB9 2 CYS F 152 ? TYR F 153 ? CYS F 488 TYR F 489 AC1 1 ALA G 18 ? CYS G 22 ? ALA C 18 CYS C 22 AC1 2 THR G 69 ? ILE G 74 ? THR C 69 ILE C 74 AC1 3 SER G 64 ? SER G 66 ? SER C 64 SER C 66 AC2 1 VAL G 44 ? ILE G 47 ? VAL C 44 ILE C 47 AC2 2 ALA G 32 ? GLN G 37 ? ALA C 32 GLN C 37 AC2 3 ASP G 84 ? VAL G 89 ? ASP C 84 VAL C 89 AC2 4 VAL G 98 ? PHE G 99 ? VAL C 98 PHE C 99 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 2 ? N GLN A 3 O SER A 24 ? O SER A 25 AA1 2 3 N CYS A 21 ? N CYS A 22 O GLY A 78 ? O GLY A 79 AA1 3 4 O THR A 77 ? O THR A 78 N ASP A 72 ? N ASP A 73 AA2 1 2 N LYS A 11 ? N LYS A 12 O THR A 123 ? O THR A 124 AA2 2 3 O VAL A 122 ? O VAL A 123 N ALA A 91 ? N ALA A 92 AA2 3 4 O ASP A 98 ? O ASP A 99 N GLY A 32 ? N GLY A 33 AA2 4 5 N ARG A 37 ? N ARG A 38 O GLU A 45 ? O GLU A 46 AA3 1 2 N THR B 5 ? N THR B 5 O ARG B 24 ? O ARG B 24 AA4 1 2 N LEU B 11 ? N LEU B 11 O GLU B 105 ? O GLU B 105 AA4 2 3 O THR B 102 ? O THR B 102 N TYR B 87 ? N TYR B 87 AA4 3 4 O VAL B 86 ? O VAL B 86 N GLN B 39 ? N GLN B 39 AA4 4 5 N TRP B 36 ? N TRP B 36 O ILE B 49 ? O ILE B 49 AA5 1 2 N ALA B 19 ? N ALA B 19 O ILE B 76 ? O ILE B 76 AA6 1 2 N SER B 66 ? N SER B 66 O THR B 73 ? O THR B 73 AA7 1 2 N GLN B 91 ? N GLN B 91 O THR B 97 ? O THR B 97 AA8 1 2 O TYR C 58 ? O TYR H 58 N THR C 50 ? N THR H 50 AA8 2 3 O GLU C 46 ? O GLU H 46 N ARG C 38 ? N ARG H 38 AA8 3 4 N GLN C 39 ? N GLN H 39 O VAL C 92 ? O VAL H 92 AA8 4 5 N TYR C 93 ? N TYR H 93 O THR C 114 ? O THR H 114 AA9 1 2 N GLU C 72 ? N GLU H 72 O SER C 77 ? O SER H 77 AB1 1 2 N ARG C 97 ? N ARG H 97 O ASP C 108 ? O ASP H 108 AB2 1 2 O LEU D 11 ? O LEU L 11 N LYS D 104 ? N LYS L 104 AB2 2 3 O THR D 103 ? O THR L 103 N TYR D 86 ? N TYR L 86 AB2 3 4 O ILE D 85 ? O ILE L 85 N GLN D 38 ? N GLN L 38 AB2 4 5 N TRP D 35 ? N TRP L 35 O ILE D 48 ? O ILE L 48 AB3 1 2 N ILE D 21 ? N ILE L 21 O LEU D 73 ? O LEU L 73 AB3 2 3 O THR D 74 ? O THR L 74 N SER D 63 ? N SER L 63 AB4 1 2 N LEU E 18 ? N LEU D 18 O MET E 82 ? O MET D 82 AB5 1 2 O TYR E 58 ? O TYR D 58 N VAL E 50 ? N VAL D 50 AB5 2 3 O ILE E 51 ? O ILE D 51 N MET E 34 ? N MET D 34 AB5 3 4 N VAL E 37 ? N VAL D 37 O TYR E 94 ? O TYR D 94 AB5 4 5 N ARG E 97 ? N ARG D 97 O ILE E 107 ? O ILE D 107 AB6 1 2 O TYR E 58 ? O TYR D 58 N VAL E 50 ? N VAL D 50 AB6 2 3 O ILE E 51 ? O ILE D 51 N MET E 34 ? N MET D 34 AB6 3 4 N VAL E 37 ? N VAL D 37 O TYR E 94 ? O TYR D 94 AB6 4 5 N TYR E 93 ? N TYR D 93 O THR E 112 ? O THR D 112 AB7 1 2 N ILE F 66 ? N ILE F 402 O TYR F 172 ? O TYR F 508 AB7 2 3 O LEU F 177 ? O LEU F 513 N CYS F 96 ? N CYS F 432 AB8 1 2 N TYR F 117 ? N TYR F 453 O ARG F 157 ? O ARG F 493 AB9 1 2 N TYR F 137 ? N TYR F 473 O TYR F 153 ? O TYR F 489 AC1 1 2 N ILE G 20 ? N ILE C 20 O LEU G 72 ? O LEU C 72 AC1 2 3 O THR G 71 ? O THR C 71 N SER G 64 ? N SER C 64 AC2 1 2 O ILE G 47 ? O ILE C 47 N TRP G 34 ? N TRP C 34 AC2 2 3 N GLN G 37 ? N GLN C 37 O ASP G 84 ? O ASP C 84 AC2 3 4 N VAL G 89 ? N VAL C 89 O VAL G 98 ? O VAL C 98 # _pdbx_entry_details.entry_id 9LBS _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 54 ? ? 72.56 -9.95 2 1 ASP A 89 ? ? -91.05 52.78 3 1 ASP A 115 ? ? -67.41 -86.39 4 1 SER A 126 ? ? -131.72 -36.89 5 1 PRO B 8 ? ? -82.85 -159.76 6 1 SER B 26 ? ? -79.84 -157.73 7 1 GLN B 27 ? ? -35.72 137.47 8 1 LEU B 34 ? ? -140.87 46.83 9 1 ALA B 52 ? ? 72.20 -12.74 10 1 SER B 53 ? ? -155.26 89.55 11 1 SER B 54 ? ? -166.73 114.29 12 1 SER B 64 ? ? -94.85 -62.83 13 1 ARG B 78 ? ? 64.00 157.88 14 1 ASP B 83 ? ? -143.71 44.09 15 1 SER B 95 ? ? 58.00 -120.93 16 1 ALA H 23 ? ? 53.91 -100.82 17 1 ALA H 24 ? ? 67.09 177.41 18 1 THR H 53 ? ? -83.14 45.16 19 1 ASP H 108 ? ? -78.47 -167.32 20 1 VAL H 118 ? ? 39.39 46.39 21 1 SER L 7 ? ? -145.98 48.95 22 1 PRO L 8 ? ? -94.68 55.26 23 1 SER L 26 ? ? -79.18 -158.12 24 1 GLN L 27 ? ? -37.89 142.71 25 1 ALA L 50 ? ? 58.16 12.64 26 1 ALA L 51 ? ? 67.67 -5.40 27 1 THR L 69 ? ? -91.23 47.23 28 1 ALA L 84 ? ? 71.40 -148.50 29 1 SER D 25 ? ? -160.48 115.60 30 1 SER D 30 ? ? -89.46 45.16 31 1 TYR D 33 ? ? -105.23 57.64 32 1 PRO D 41 ? ? -69.26 77.19 33 1 VAL D 48 ? ? -125.60 -62.47 34 1 ARG D 71 ? ? -161.48 117.85 35 1 LEU D 80 ? ? -151.30 89.18 36 1 PRO D 102 ? ? -60.76 16.00 37 1 ASP D 103 ? ? -118.56 -168.83 38 1 VAL F 362 ? ? -109.64 -73.00 39 1 ALA F 363 ? ? -138.60 -46.03 40 1 ASP F 364 ? ? 37.13 51.16 41 1 PHE F 375 ? ? 51.43 -96.79 42 1 LYS F 378 ? ? -69.08 93.46 43 1 ASP F 389 ? ? -144.53 -2.71 44 1 SER F 459 ? ? 119.01 122.04 45 1 CYS F 480 ? ? 39.76 53.74 46 1 ASN F 487 ? ? 67.79 -3.63 47 1 GLN C 41 ? ? -148.72 25.63 48 1 ALA C 42 ? ? 59.97 75.62 49 1 PRO C 43 ? ? -38.94 142.85 50 1 ASP C 50 ? ? 63.42 -70.86 51 1 ALA C 79 ? ? 67.32 -3.09 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9LBS _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'RIGID BODY FIT' # loop_ _em_3d_fitting_list.id _em_3d_fitting_list.3d_fitting_id _em_3d_fitting_list.pdb_entry_id _em_3d_fitting_list.pdb_chain_id _em_3d_fitting_list.pdb_chain_residue_range _em_3d_fitting_list.details _em_3d_fitting_list.chain_id _em_3d_fitting_list.chain_residue_range _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_3d_fitting_list.accession_code _em_3d_fitting_list.initial_refinement_model_id 1 1 7x1m A ? ? A ? PDB 'experimental model' 7x1m 1 2 1 7x1m B ? ? B ? PDB 'experimental model' 7x1m 1 3 1 7x1m H ? ? H ? PDB 'experimental model' 7x1m 1 4 1 7x1m L ? ? L ? PDB 'experimental model' 7x1m 1 5 1 7x1m M ? ? M ? PDB 'experimental model' 7x1m 1 6 1 . . . ? ? ? AlphaFold 'in silico model' ? ? # _em_3d_reconstruction.entry_id 9LBS _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.41 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 220864 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details PBS _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Cryo-EM structure of Omicron BA.1 RBD complexed with ConBA-998,S309 and S304Fabs' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3, 4, 5, 6, 7' # _em_image_scans.entry_id 9LBS _em_image_scans.id 1 _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.scanner_model ? _em_image_scans.sampling_size ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? _em_image_scans.dimension_height 4092 _em_image_scans.dimension_width 5760 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.used_frames_per_image ? # _em_imaging.entry_id 9LBS _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 1500 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min 1200 _em_imaging.calibrated_defocus_max 3500 _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter 70 _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9LBS _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ;blot time:4s wait time:2.5s blot force:0 ; # _em_experiment.entry_id 9LBS _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FUC C1 C N R 88 FUC C2 C N S 89 FUC C3 C N R 90 FUC C4 C N S 91 FUC C5 C N S 92 FUC C6 C N N 93 FUC O1 O N N 94 FUC O2 O N N 95 FUC O3 O N N 96 FUC O4 O N N 97 FUC O5 O N N 98 FUC H1 H N N 99 FUC H2 H N N 100 FUC H3 H N N 101 FUC H4 H N N 102 FUC H5 H N N 103 FUC H61 H N N 104 FUC H62 H N N 105 FUC H63 H N N 106 FUC HO1 H N N 107 FUC HO2 H N N 108 FUC HO3 H N N 109 FUC HO4 H N N 110 GLN N N N N 111 GLN CA C N S 112 GLN C C N N 113 GLN O O N N 114 GLN CB C N N 115 GLN CG C N N 116 GLN CD C N N 117 GLN OE1 O N N 118 GLN NE2 N N N 119 GLN OXT O N N 120 GLN H H N N 121 GLN H2 H N N 122 GLN HA H N N 123 GLN HB2 H N N 124 GLN HB3 H N N 125 GLN HG2 H N N 126 GLN HG3 H N N 127 GLN HE21 H N N 128 GLN HE22 H N N 129 GLN HXT H N N 130 GLU N N N N 131 GLU CA C N S 132 GLU C C N N 133 GLU O O N N 134 GLU CB C N N 135 GLU CG C N N 136 GLU CD C N N 137 GLU OE1 O N N 138 GLU OE2 O N N 139 GLU OXT O N N 140 GLU H H N N 141 GLU H2 H N N 142 GLU HA H N N 143 GLU HB2 H N N 144 GLU HB3 H N N 145 GLU HG2 H N N 146 GLU HG3 H N N 147 GLU HE2 H N N 148 GLU HXT H N N 149 GLY N N N N 150 GLY CA C N N 151 GLY C C N N 152 GLY O O N N 153 GLY OXT O N N 154 GLY H H N N 155 GLY H2 H N N 156 GLY HA2 H N N 157 GLY HA3 H N N 158 GLY HXT H N N 159 HIS N N N N 160 HIS CA C N S 161 HIS C C N N 162 HIS O O N N 163 HIS CB C N N 164 HIS CG C Y N 165 HIS ND1 N Y N 166 HIS CD2 C Y N 167 HIS CE1 C Y N 168 HIS NE2 N Y N 169 HIS OXT O N N 170 HIS H H N N 171 HIS H2 H N N 172 HIS HA H N N 173 HIS HB2 H N N 174 HIS HB3 H N N 175 HIS HD1 H N N 176 HIS HD2 H N N 177 HIS HE1 H N N 178 HIS HE2 H N N 179 HIS HXT H N N 180 ILE N N N N 181 ILE CA C N S 182 ILE C C N N 183 ILE O O N N 184 ILE CB C N S 185 ILE CG1 C N N 186 ILE CG2 C N N 187 ILE CD1 C N N 188 ILE OXT O N N 189 ILE H H N N 190 ILE H2 H N N 191 ILE HA H N N 192 ILE HB H N N 193 ILE HG12 H N N 194 ILE HG13 H N N 195 ILE HG21 H N N 196 ILE HG22 H N N 197 ILE HG23 H N N 198 ILE HD11 H N N 199 ILE HD12 H N N 200 ILE HD13 H N N 201 ILE HXT H N N 202 LEU N N N N 203 LEU CA C N S 204 LEU C C N N 205 LEU O O N N 206 LEU CB C N N 207 LEU CG C N N 208 LEU CD1 C N N 209 LEU CD2 C N N 210 LEU OXT O N N 211 LEU H H N N 212 LEU H2 H N N 213 LEU HA H N N 214 LEU HB2 H N N 215 LEU HB3 H N N 216 LEU HG H N N 217 LEU HD11 H N N 218 LEU HD12 H N N 219 LEU HD13 H N N 220 LEU HD21 H N N 221 LEU HD22 H N N 222 LEU HD23 H N N 223 LEU HXT H N N 224 LYS N N N N 225 LYS CA C N S 226 LYS C C N N 227 LYS O O N N 228 LYS CB C N N 229 LYS CG C N N 230 LYS CD C N N 231 LYS CE C N N 232 LYS NZ N N N 233 LYS OXT O N N 234 LYS H H N N 235 LYS H2 H N N 236 LYS HA H N N 237 LYS HB2 H N N 238 LYS HB3 H N N 239 LYS HG2 H N N 240 LYS HG3 H N N 241 LYS HD2 H N N 242 LYS HD3 H N N 243 LYS HE2 H N N 244 LYS HE3 H N N 245 LYS HZ1 H N N 246 LYS HZ2 H N N 247 LYS HZ3 H N N 248 LYS HXT H N N 249 MET N N N N 250 MET CA C N S 251 MET C C N N 252 MET O O N N 253 MET CB C N N 254 MET CG C N N 255 MET SD S N N 256 MET CE C N N 257 MET OXT O N N 258 MET H H N N 259 MET H2 H N N 260 MET HA H N N 261 MET HB2 H N N 262 MET HB3 H N N 263 MET HG2 H N N 264 MET HG3 H N N 265 MET HE1 H N N 266 MET HE2 H N N 267 MET HE3 H N N 268 MET HXT H N N 269 NAG C1 C N R 270 NAG C2 C N R 271 NAG C3 C N R 272 NAG C4 C N S 273 NAG C5 C N R 274 NAG C6 C N N 275 NAG C7 C N N 276 NAG C8 C N N 277 NAG N2 N N N 278 NAG O1 O N N 279 NAG O3 O N N 280 NAG O4 O N N 281 NAG O5 O N N 282 NAG O6 O N N 283 NAG O7 O N N 284 NAG H1 H N N 285 NAG H2 H N N 286 NAG H3 H N N 287 NAG H4 H N N 288 NAG H5 H N N 289 NAG H61 H N N 290 NAG H62 H N N 291 NAG H81 H N N 292 NAG H82 H N N 293 NAG H83 H N N 294 NAG HN2 H N N 295 NAG HO1 H N N 296 NAG HO3 H N N 297 NAG HO4 H N N 298 NAG HO6 H N N 299 PHE N N N N 300 PHE CA C N S 301 PHE C C N N 302 PHE O O N N 303 PHE CB C N N 304 PHE CG C Y N 305 PHE CD1 C Y N 306 PHE CD2 C Y N 307 PHE CE1 C Y N 308 PHE CE2 C Y N 309 PHE CZ C Y N 310 PHE OXT O N N 311 PHE H H N N 312 PHE H2 H N N 313 PHE HA H N N 314 PHE HB2 H N N 315 PHE HB3 H N N 316 PHE HD1 H N N 317 PHE HD2 H N N 318 PHE HE1 H N N 319 PHE HE2 H N N 320 PHE HZ H N N 321 PHE HXT H N N 322 PRO N N N N 323 PRO CA C N S 324 PRO C C N N 325 PRO O O N N 326 PRO CB C N N 327 PRO CG C N N 328 PRO CD C N N 329 PRO OXT O N N 330 PRO H H N N 331 PRO HA H N N 332 PRO HB2 H N N 333 PRO HB3 H N N 334 PRO HG2 H N N 335 PRO HG3 H N N 336 PRO HD2 H N N 337 PRO HD3 H N N 338 PRO HXT H N N 339 SER N N N N 340 SER CA C N S 341 SER C C N N 342 SER O O N N 343 SER CB C N N 344 SER OG O N N 345 SER OXT O N N 346 SER H H N N 347 SER H2 H N N 348 SER HA H N N 349 SER HB2 H N N 350 SER HB3 H N N 351 SER HG H N N 352 SER HXT H N N 353 THR N N N N 354 THR CA C N S 355 THR C C N N 356 THR O O N N 357 THR CB C N R 358 THR OG1 O N N 359 THR CG2 C N N 360 THR OXT O N N 361 THR H H N N 362 THR H2 H N N 363 THR HA H N N 364 THR HB H N N 365 THR HG1 H N N 366 THR HG21 H N N 367 THR HG22 H N N 368 THR HG23 H N N 369 THR HXT H N N 370 TRP N N N N 371 TRP CA C N S 372 TRP C C N N 373 TRP O O N N 374 TRP CB C N N 375 TRP CG C Y N 376 TRP CD1 C Y N 377 TRP CD2 C Y N 378 TRP NE1 N Y N 379 TRP CE2 C Y N 380 TRP CE3 C Y N 381 TRP CZ2 C Y N 382 TRP CZ3 C Y N 383 TRP CH2 C Y N 384 TRP OXT O N N 385 TRP H H N N 386 TRP H2 H N N 387 TRP HA H N N 388 TRP HB2 H N N 389 TRP HB3 H N N 390 TRP HD1 H N N 391 TRP HE1 H N N 392 TRP HE3 H N N 393 TRP HZ2 H N N 394 TRP HZ3 H N N 395 TRP HH2 H N N 396 TRP HXT H N N 397 TYR N N N N 398 TYR CA C N S 399 TYR C C N N 400 TYR O O N N 401 TYR CB C N N 402 TYR CG C Y N 403 TYR CD1 C Y N 404 TYR CD2 C Y N 405 TYR CE1 C Y N 406 TYR CE2 C Y N 407 TYR CZ C Y N 408 TYR OH O N N 409 TYR OXT O N N 410 TYR H H N N 411 TYR H2 H N N 412 TYR HA H N N 413 TYR HB2 H N N 414 TYR HB3 H N N 415 TYR HD1 H N N 416 TYR HD2 H N N 417 TYR HE1 H N N 418 TYR HE2 H N N 419 TYR HH H N N 420 TYR HXT H N N 421 VAL N N N N 422 VAL CA C N S 423 VAL C C N N 424 VAL O O N N 425 VAL CB C N N 426 VAL CG1 C N N 427 VAL CG2 C N N 428 VAL OXT O N N 429 VAL H H N N 430 VAL H2 H N N 431 VAL HA H N N 432 VAL HB H N N 433 VAL HG11 H N N 434 VAL HG12 H N N 435 VAL HG13 H N N 436 VAL HG21 H N N 437 VAL HG22 H N N 438 VAL HG23 H N N 439 VAL HXT H N N 440 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FUC C1 C2 sing N N 83 FUC C1 O1 sing N N 84 FUC C1 O5 sing N N 85 FUC C1 H1 sing N N 86 FUC C2 C3 sing N N 87 FUC C2 O2 sing N N 88 FUC C2 H2 sing N N 89 FUC C3 C4 sing N N 90 FUC C3 O3 sing N N 91 FUC C3 H3 sing N N 92 FUC C4 C5 sing N N 93 FUC C4 O4 sing N N 94 FUC C4 H4 sing N N 95 FUC C5 C6 sing N N 96 FUC C5 O5 sing N N 97 FUC C5 H5 sing N N 98 FUC C6 H61 sing N N 99 FUC C6 H62 sing N N 100 FUC C6 H63 sing N N 101 FUC O1 HO1 sing N N 102 FUC O2 HO2 sing N N 103 FUC O3 HO3 sing N N 104 FUC O4 HO4 sing N N 105 GLN N CA sing N N 106 GLN N H sing N N 107 GLN N H2 sing N N 108 GLN CA C sing N N 109 GLN CA CB sing N N 110 GLN CA HA sing N N 111 GLN C O doub N N 112 GLN C OXT sing N N 113 GLN CB CG sing N N 114 GLN CB HB2 sing N N 115 GLN CB HB3 sing N N 116 GLN CG CD sing N N 117 GLN CG HG2 sing N N 118 GLN CG HG3 sing N N 119 GLN CD OE1 doub N N 120 GLN CD NE2 sing N N 121 GLN NE2 HE21 sing N N 122 GLN NE2 HE22 sing N N 123 GLN OXT HXT sing N N 124 GLU N CA sing N N 125 GLU N H sing N N 126 GLU N H2 sing N N 127 GLU CA C sing N N 128 GLU CA CB sing N N 129 GLU CA HA sing N N 130 GLU C O doub N N 131 GLU C OXT sing N N 132 GLU CB CG sing N N 133 GLU CB HB2 sing N N 134 GLU CB HB3 sing N N 135 GLU CG CD sing N N 136 GLU CG HG2 sing N N 137 GLU CG HG3 sing N N 138 GLU CD OE1 doub N N 139 GLU CD OE2 sing N N 140 GLU OE2 HE2 sing N N 141 GLU OXT HXT sing N N 142 GLY N CA sing N N 143 GLY N H sing N N 144 GLY N H2 sing N N 145 GLY CA C sing N N 146 GLY CA HA2 sing N N 147 GLY CA HA3 sing N N 148 GLY C O doub N N 149 GLY C OXT sing N N 150 GLY OXT HXT sing N N 151 HIS N CA sing N N 152 HIS N H sing N N 153 HIS N H2 sing N N 154 HIS CA C sing N N 155 HIS CA CB sing N N 156 HIS CA HA sing N N 157 HIS C O doub N N 158 HIS C OXT sing N N 159 HIS CB CG sing N N 160 HIS CB HB2 sing N N 161 HIS CB HB3 sing N N 162 HIS CG ND1 sing Y N 163 HIS CG CD2 doub Y N 164 HIS ND1 CE1 doub Y N 165 HIS ND1 HD1 sing N N 166 HIS CD2 NE2 sing Y N 167 HIS CD2 HD2 sing N N 168 HIS CE1 NE2 sing Y N 169 HIS CE1 HE1 sing N N 170 HIS NE2 HE2 sing N N 171 HIS OXT HXT sing N N 172 ILE N CA sing N N 173 ILE N H sing N N 174 ILE N H2 sing N N 175 ILE CA C sing N N 176 ILE CA CB sing N N 177 ILE CA HA sing N N 178 ILE C O doub N N 179 ILE C OXT sing N N 180 ILE CB CG1 sing N N 181 ILE CB CG2 sing N N 182 ILE CB HB sing N N 183 ILE CG1 CD1 sing N N 184 ILE CG1 HG12 sing N N 185 ILE CG1 HG13 sing N N 186 ILE CG2 HG21 sing N N 187 ILE CG2 HG22 sing N N 188 ILE CG2 HG23 sing N N 189 ILE CD1 HD11 sing N N 190 ILE CD1 HD12 sing N N 191 ILE CD1 HD13 sing N N 192 ILE OXT HXT sing N N 193 LEU N CA sing N N 194 LEU N H sing N N 195 LEU N H2 sing N N 196 LEU CA C sing N N 197 LEU CA CB sing N N 198 LEU CA HA sing N N 199 LEU C O doub N N 200 LEU C OXT sing N N 201 LEU CB CG sing N N 202 LEU CB HB2 sing N N 203 LEU CB HB3 sing N N 204 LEU CG CD1 sing N N 205 LEU CG CD2 sing N N 206 LEU CG HG sing N N 207 LEU CD1 HD11 sing N N 208 LEU CD1 HD12 sing N N 209 LEU CD1 HD13 sing N N 210 LEU CD2 HD21 sing N N 211 LEU CD2 HD22 sing N N 212 LEU CD2 HD23 sing N N 213 LEU OXT HXT sing N N 214 LYS N CA sing N N 215 LYS N H sing N N 216 LYS N H2 sing N N 217 LYS CA C sing N N 218 LYS CA CB sing N N 219 LYS CA HA sing N N 220 LYS C O doub N N 221 LYS C OXT sing N N 222 LYS CB CG sing N N 223 LYS CB HB2 sing N N 224 LYS CB HB3 sing N N 225 LYS CG CD sing N N 226 LYS CG HG2 sing N N 227 LYS CG HG3 sing N N 228 LYS CD CE sing N N 229 LYS CD HD2 sing N N 230 LYS CD HD3 sing N N 231 LYS CE NZ sing N N 232 LYS CE HE2 sing N N 233 LYS CE HE3 sing N N 234 LYS NZ HZ1 sing N N 235 LYS NZ HZ2 sing N N 236 LYS NZ HZ3 sing N N 237 LYS OXT HXT sing N N 238 MET N CA sing N N 239 MET N H sing N N 240 MET N H2 sing N N 241 MET CA C sing N N 242 MET CA CB sing N N 243 MET CA HA sing N N 244 MET C O doub N N 245 MET C OXT sing N N 246 MET CB CG sing N N 247 MET CB HB2 sing N N 248 MET CB HB3 sing N N 249 MET CG SD sing N N 250 MET CG HG2 sing N N 251 MET CG HG3 sing N N 252 MET SD CE sing N N 253 MET CE HE1 sing N N 254 MET CE HE2 sing N N 255 MET CE HE3 sing N N 256 MET OXT HXT sing N N 257 NAG C1 C2 sing N N 258 NAG C1 O1 sing N N 259 NAG C1 O5 sing N N 260 NAG C1 H1 sing N N 261 NAG C2 C3 sing N N 262 NAG C2 N2 sing N N 263 NAG C2 H2 sing N N 264 NAG C3 C4 sing N N 265 NAG C3 O3 sing N N 266 NAG C3 H3 sing N N 267 NAG C4 C5 sing N N 268 NAG C4 O4 sing N N 269 NAG C4 H4 sing N N 270 NAG C5 C6 sing N N 271 NAG C5 O5 sing N N 272 NAG C5 H5 sing N N 273 NAG C6 O6 sing N N 274 NAG C6 H61 sing N N 275 NAG C6 H62 sing N N 276 NAG C7 C8 sing N N 277 NAG C7 N2 sing N N 278 NAG C7 O7 doub N N 279 NAG C8 H81 sing N N 280 NAG C8 H82 sing N N 281 NAG C8 H83 sing N N 282 NAG N2 HN2 sing N N 283 NAG O1 HO1 sing N N 284 NAG O3 HO3 sing N N 285 NAG O4 HO4 sing N N 286 NAG O6 HO6 sing N N 287 PHE N CA sing N N 288 PHE N H sing N N 289 PHE N H2 sing N N 290 PHE CA C sing N N 291 PHE CA CB sing N N 292 PHE CA HA sing N N 293 PHE C O doub N N 294 PHE C OXT sing N N 295 PHE CB CG sing N N 296 PHE CB HB2 sing N N 297 PHE CB HB3 sing N N 298 PHE CG CD1 doub Y N 299 PHE CG CD2 sing Y N 300 PHE CD1 CE1 sing Y N 301 PHE CD1 HD1 sing N N 302 PHE CD2 CE2 doub Y N 303 PHE CD2 HD2 sing N N 304 PHE CE1 CZ doub Y N 305 PHE CE1 HE1 sing N N 306 PHE CE2 CZ sing Y N 307 PHE CE2 HE2 sing N N 308 PHE CZ HZ sing N N 309 PHE OXT HXT sing N N 310 PRO N CA sing N N 311 PRO N CD sing N N 312 PRO N H sing N N 313 PRO CA C sing N N 314 PRO CA CB sing N N 315 PRO CA HA sing N N 316 PRO C O doub N N 317 PRO C OXT sing N N 318 PRO CB CG sing N N 319 PRO CB HB2 sing N N 320 PRO CB HB3 sing N N 321 PRO CG CD sing N N 322 PRO CG HG2 sing N N 323 PRO CG HG3 sing N N 324 PRO CD HD2 sing N N 325 PRO CD HD3 sing N N 326 PRO OXT HXT sing N N 327 SER N CA sing N N 328 SER N H sing N N 329 SER N H2 sing N N 330 SER CA C sing N N 331 SER CA CB sing N N 332 SER CA HA sing N N 333 SER C O doub N N 334 SER C OXT sing N N 335 SER CB OG sing N N 336 SER CB HB2 sing N N 337 SER CB HB3 sing N N 338 SER OG HG sing N N 339 SER OXT HXT sing N N 340 THR N CA sing N N 341 THR N H sing N N 342 THR N H2 sing N N 343 THR CA C sing N N 344 THR CA CB sing N N 345 THR CA HA sing N N 346 THR C O doub N N 347 THR C OXT sing N N 348 THR CB OG1 sing N N 349 THR CB CG2 sing N N 350 THR CB HB sing N N 351 THR OG1 HG1 sing N N 352 THR CG2 HG21 sing N N 353 THR CG2 HG22 sing N N 354 THR CG2 HG23 sing N N 355 THR OXT HXT sing N N 356 TRP N CA sing N N 357 TRP N H sing N N 358 TRP N H2 sing N N 359 TRP CA C sing N N 360 TRP CA CB sing N N 361 TRP CA HA sing N N 362 TRP C O doub N N 363 TRP C OXT sing N N 364 TRP CB CG sing N N 365 TRP CB HB2 sing N N 366 TRP CB HB3 sing N N 367 TRP CG CD1 doub Y N 368 TRP CG CD2 sing Y N 369 TRP CD1 NE1 sing Y N 370 TRP CD1 HD1 sing N N 371 TRP CD2 CE2 doub Y N 372 TRP CD2 CE3 sing Y N 373 TRP NE1 CE2 sing Y N 374 TRP NE1 HE1 sing N N 375 TRP CE2 CZ2 sing Y N 376 TRP CE3 CZ3 doub Y N 377 TRP CE3 HE3 sing N N 378 TRP CZ2 CH2 doub Y N 379 TRP CZ2 HZ2 sing N N 380 TRP CZ3 CH2 sing Y N 381 TRP CZ3 HZ3 sing N N 382 TRP CH2 HH2 sing N N 383 TRP OXT HXT sing N N 384 TYR N CA sing N N 385 TYR N H sing N N 386 TYR N H2 sing N N 387 TYR CA C sing N N 388 TYR CA CB sing N N 389 TYR CA HA sing N N 390 TYR C O doub N N 391 TYR C OXT sing N N 392 TYR CB CG sing N N 393 TYR CB HB2 sing N N 394 TYR CB HB3 sing N N 395 TYR CG CD1 doub Y N 396 TYR CG CD2 sing Y N 397 TYR CD1 CE1 sing Y N 398 TYR CD1 HD1 sing N N 399 TYR CD2 CE2 doub Y N 400 TYR CD2 HD2 sing N N 401 TYR CE1 CZ doub Y N 402 TYR CE1 HE1 sing N N 403 TYR CE2 CZ sing Y N 404 TYR CE2 HE2 sing N N 405 TYR CZ OH sing N N 406 TYR OH HH sing N N 407 TYR OXT HXT sing N N 408 VAL N CA sing N N 409 VAL N H sing N N 410 VAL N H2 sing N N 411 VAL CA C sing N N 412 VAL CA CB sing N N 413 VAL CA HA sing N N 414 VAL C O doub N N 415 VAL C OXT sing N N 416 VAL CB CG1 sing N N 417 VAL CB CG2 sing N N 418 VAL CB HB sing N N 419 VAL CG1 HG11 sing N N 420 VAL CG1 HG12 sing N N 421 VAL CG1 HG13 sing N N 422 VAL CG2 HG21 sing N N 423 VAL CG2 HG22 sing N N 424 VAL CG2 HG23 sing N N 425 VAL OXT HXT sing N N 426 # _em_admin.current_status REL _em_admin.deposition_date 2025-01-03 _em_admin.deposition_site PDBJ _em_admin.entry_id 9LBS _em_admin.last_update 2025-04-02 _em_admin.map_release_date 2025-04-02 _em_admin.title 'Cryo-EM structure of Omicron BA.1 RBD complexed with ConBA-998,S309 and S304Fabs' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 1.5625 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOCONTINUUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 8311 # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.energyfilter_name 'GIF Bioquantum' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 1350749 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? Gautomatch ? 'IMAGE ACQUISITION' ? 2 ? ? 1 SerialEM ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? CTFFIND 4 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? 'UCSF Chimera' ? OTHER ? 8 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? RELION 3.1.2 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? cryoSPARC ? CLASSIFICATION ? 11 1 ? ? RELION 3.1.2 RECONSTRUCTION ? 12 1 ? ? cryoSPARC ? 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX 1.20.1_4487 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration 0.5 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 82025022 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 8 NAG 1 n 8 NAG 2 n 8 FUC 3 n # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 7x1m ? 2 ? 'in silico model' AlphaFold ? ? # _atom_sites.entry_id 9LBS _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_