data_9LNP # _entry.id 9LNP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.403 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9LNP pdb_00009lnp 10.2210/pdb9lnp/pdb WWPDB D_1300056035 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-04-16 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9LNP _pdbx_database_status.recvd_initial_deposition_date 2025-01-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 yvliu@nankai.edu.cn Yijin Liu ? 'principal investigator/group leader' 0000-0002-3643-8683 3 chuanzheng.zhou@nankai.edu.cn Chuanzheng Zhou ? 'principal investigator/group leader' 0000-0002-0811-7794 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Liu, Y.' 1 0000-0002-3643-8683 'Zhou, C.' 2 0000-0002-0811-7794 'Zhan, X.' 3 ? 'Fan, C.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 147 _citation.language ? _citation.page_first 11574 _citation.page_last 11583 _citation.title 'Uridine Embedded within DNA is Repaired by Uracil DNA Glycosylase via a Mechanism Distinct from That of Ribonuclease H2.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.5c01436 _citation.pdbx_database_id_PubMed 40130361 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fan, C.' 1 ? primary 'Zhan, X.' 2 ? primary 'Guo, F.' 3 ? primary 'Li, Q.' 4 ? primary 'Lu, K.' 5 ? primary 'Shan, X.' 6 ? primary 'Zhou, Y.' 7 ? primary 'Ren, M.' 8 ? primary 'Greenberg, M.M.' 9 0000-0002-5786-6118 primary 'Liu, Y.' 10 0000-0002-3643-8683 primary 'Zhou, C.' 11 0000-0002-0811-7794 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*GP*T*(RP5)P*AP*TP*CP*TP*T)-3') ; 2619.696 1 ? ? ? 'sythesized DNA oligo embeding rU' 2 polymer syn ;DNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*AP*CP*A)-3') ; 3070.071 1 ? ? ? ? 3 polymer man 'Uracil-DNA glycosylase' 25550.127 1 3.2.2.27 ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 5 water nat water 18.015 325 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name UDG # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DT)(DG)(DT)(RP5)(DA)(DT)(DC)(DT)(DT)' TGTXATCTT A ? 2 polydeoxyribonucleotide no no '(DA)(DA)(DA)(DG)(DA)(DT)(DA)(DA)(DC)(DA)' AAAGATAACA B ? 3 'polypeptide(L)' no no ;GSHMFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSV QRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGL VFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL ; ;GSHMFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSV QRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGL VFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL ; E ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CALCIUM ION' CA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DG n 1 3 DT n 1 4 RP5 n 1 5 DA n 1 6 DT n 1 7 DC n 1 8 DT n 1 9 DT n 2 1 DA n 2 2 DA n 2 3 DA n 2 4 DG n 2 5 DA n 2 6 DT n 2 7 DA n 2 8 DA n 2 9 DC n 2 10 DA n 3 1 GLY n 3 2 SER n 3 3 HIS n 3 4 MET n 3 5 PHE n 3 6 GLY n 3 7 GLU n 3 8 SER n 3 9 TRP n 3 10 LYS n 3 11 LYS n 3 12 HIS n 3 13 LEU n 3 14 SER n 3 15 GLY n 3 16 GLU n 3 17 PHE n 3 18 GLY n 3 19 LYS n 3 20 PRO n 3 21 TYR n 3 22 PHE n 3 23 ILE n 3 24 LYS n 3 25 LEU n 3 26 MET n 3 27 GLY n 3 28 PHE n 3 29 VAL n 3 30 ALA n 3 31 GLU n 3 32 GLU n 3 33 ARG n 3 34 LYS n 3 35 HIS n 3 36 TYR n 3 37 THR n 3 38 VAL n 3 39 TYR n 3 40 PRO n 3 41 PRO n 3 42 PRO n 3 43 HIS n 3 44 GLN n 3 45 VAL n 3 46 PHE n 3 47 THR n 3 48 TRP n 3 49 THR n 3 50 GLN n 3 51 MET n 3 52 CYS n 3 53 ASP n 3 54 ILE n 3 55 LYS n 3 56 ASP n 3 57 VAL n 3 58 LYS n 3 59 VAL n 3 60 VAL n 3 61 ILE n 3 62 LEU n 3 63 GLY n 3 64 GLN n 3 65 ASP n 3 66 PRO n 3 67 TYR n 3 68 HIS n 3 69 GLY n 3 70 PRO n 3 71 ASN n 3 72 GLN n 3 73 ALA n 3 74 HIS n 3 75 GLY n 3 76 LEU n 3 77 CYS n 3 78 PHE n 3 79 SER n 3 80 VAL n 3 81 GLN n 3 82 ARG n 3 83 PRO n 3 84 VAL n 3 85 PRO n 3 86 PRO n 3 87 PRO n 3 88 PRO n 3 89 SER n 3 90 LEU n 3 91 GLU n 3 92 ASN n 3 93 ILE n 3 94 TYR n 3 95 LYS n 3 96 GLU n 3 97 LEU n 3 98 SER n 3 99 THR n 3 100 ASP n 3 101 ILE n 3 102 GLU n 3 103 ASP n 3 104 PHE n 3 105 VAL n 3 106 HIS n 3 107 PRO n 3 108 GLY n 3 109 HIS n 3 110 GLY n 3 111 ASP n 3 112 LEU n 3 113 SER n 3 114 GLY n 3 115 TRP n 3 116 ALA n 3 117 LYS n 3 118 GLN n 3 119 GLY n 3 120 VAL n 3 121 LEU n 3 122 LEU n 3 123 LEU n 3 124 ASN n 3 125 ALA n 3 126 VAL n 3 127 LEU n 3 128 THR n 3 129 VAL n 3 130 ARG n 3 131 ALA n 3 132 HIS n 3 133 GLN n 3 134 ALA n 3 135 ASN n 3 136 SER n 3 137 HIS n 3 138 LYS n 3 139 GLU n 3 140 ARG n 3 141 GLY n 3 142 TRP n 3 143 GLU n 3 144 GLN n 3 145 PHE n 3 146 THR n 3 147 ASP n 3 148 ALA n 3 149 VAL n 3 150 VAL n 3 151 SER n 3 152 TRP n 3 153 LEU n 3 154 ASN n 3 155 GLN n 3 156 ASN n 3 157 SER n 3 158 ASN n 3 159 GLY n 3 160 LEU n 3 161 VAL n 3 162 PHE n 3 163 LEU n 3 164 LEU n 3 165 TRP n 3 166 GLY n 3 167 SER n 3 168 TYR n 3 169 ALA n 3 170 GLN n 3 171 LYS n 3 172 LYS n 3 173 GLY n 3 174 SER n 3 175 ALA n 3 176 ILE n 3 177 ASP n 3 178 ARG n 3 179 LYS n 3 180 ARG n 3 181 HIS n 3 182 HIS n 3 183 VAL n 3 184 LEU n 3 185 GLN n 3 186 THR n 3 187 ALA n 3 188 HIS n 3 189 PRO n 3 190 SER n 3 191 PRO n 3 192 LEU n 3 193 SER n 3 194 VAL n 3 195 TYR n 3 196 ARG n 3 197 GLY n 3 198 PHE n 3 199 PHE n 3 200 GLY n 3 201 CYS n 3 202 ARG n 3 203 HIS n 3 204 PHE n 3 205 SER n 3 206 LYS n 3 207 THR n 3 208 ASN n 3 209 GLU n 3 210 LEU n 3 211 LEU n 3 212 GLN n 3 213 LYS n 3 214 SER n 3 215 GLY n 3 216 LYS n 3 217 LYS n 3 218 PRO n 3 219 ILE n 3 220 ASP n 3 221 TRP n 3 222 LYS n 3 223 GLU n 3 224 LEU n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 224 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'UNG, DGU, UNG1, UNG15' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ;Escherichia coli 'BL21-Gold(DE3)pLysS AG' ; _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 866768 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 9 'Homo sapiens' human 9606 ? 2 1 sample 1 10 'Homo sapiens' human 9606 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RP5 'D-saccharide, beta linking' n 5-O-phosphono-beta-D-ribofuranose ;[(2R,3S,4S,5R)-3,4,5-TRIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN PHOSPHATE; 5-O-phosphono-beta-D-ribose; 5-O-phosphono-D-ribose; 5-O-phosphono-ribose ; 'C5 H11 O8 P' 230.110 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _pdbx_chem_comp_identifier.comp_id RP5 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier b-D-Ribf5PO3 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 2 2 DT DT A . n A 1 2 DG 2 3 3 DG DG A . n A 1 3 DT 3 4 4 DT DT A . n A 1 4 RP5 4 5 5 RP5 LIG A . n A 1 5 DA 5 6 6 DA DA A . n A 1 6 DT 6 7 7 DT DT A . n A 1 7 DC 7 8 8 DC DC A . n A 1 8 DT 8 9 9 DT DT A . n A 1 9 DT 9 10 10 DT DT A . n B 2 1 DA 1 1 1 DA DA B . n B 2 2 DA 2 2 2 DA DA B . n B 2 3 DA 3 3 3 DA DA B . n B 2 4 DG 4 4 4 DG DG B . n B 2 5 DA 5 5 5 DA DA B . n B 2 6 DT 6 6 6 DT DT B . n B 2 7 DA 7 7 7 DA DA B . n B 2 8 DA 8 8 8 DA DA B . n B 2 9 DC 9 9 9 DC DC B . n B 2 10 DA 10 10 10 DA DA B . n C 3 1 GLY 1 81 81 GLY GLY E . n C 3 2 SER 2 82 82 SER SER E . n C 3 3 HIS 3 83 83 HIS HIS E . n C 3 4 MET 4 84 84 MET MET E . n C 3 5 PHE 5 85 85 PHE PHE E . n C 3 6 GLY 6 86 86 GLY GLY E . n C 3 7 GLU 7 87 87 GLU GLU E . n C 3 8 SER 8 88 88 SER SER E . n C 3 9 TRP 9 89 89 TRP TRP E . n C 3 10 LYS 10 90 90 LYS LYS E . n C 3 11 LYS 11 91 91 LYS LYS E . n C 3 12 HIS 12 92 92 HIS HIS E . n C 3 13 LEU 13 93 93 LEU LEU E . n C 3 14 SER 14 94 94 SER SER E . n C 3 15 GLY 15 95 95 GLY GLY E . n C 3 16 GLU 16 96 96 GLU GLU E . n C 3 17 PHE 17 97 97 PHE PHE E . n C 3 18 GLY 18 98 98 GLY GLY E . n C 3 19 LYS 19 99 99 LYS LYS E . n C 3 20 PRO 20 100 100 PRO PRO E . n C 3 21 TYR 21 101 101 TYR TYR E . n C 3 22 PHE 22 102 102 PHE PHE E . n C 3 23 ILE 23 103 103 ILE ILE E . n C 3 24 LYS 24 104 104 LYS LYS E . n C 3 25 LEU 25 105 105 LEU LEU E . n C 3 26 MET 26 106 106 MET MET E . n C 3 27 GLY 27 107 107 GLY GLY E . n C 3 28 PHE 28 108 108 PHE PHE E . n C 3 29 VAL 29 109 109 VAL VAL E . n C 3 30 ALA 30 110 110 ALA ALA E . n C 3 31 GLU 31 111 111 GLU GLU E . n C 3 32 GLU 32 112 112 GLU GLU E . n C 3 33 ARG 33 113 113 ARG ARG E . n C 3 34 LYS 34 114 114 LYS LYS E . n C 3 35 HIS 35 115 115 HIS HIS E . n C 3 36 TYR 36 116 116 TYR TYR E . n C 3 37 THR 37 117 117 THR THR E . n C 3 38 VAL 38 118 118 VAL VAL E . n C 3 39 TYR 39 119 119 TYR TYR E . n C 3 40 PRO 40 120 120 PRO PRO E . n C 3 41 PRO 41 121 121 PRO PRO E . n C 3 42 PRO 42 122 122 PRO PRO E . n C 3 43 HIS 43 123 123 HIS HIS E . n C 3 44 GLN 44 124 124 GLN GLN E . n C 3 45 VAL 45 125 125 VAL VAL E . n C 3 46 PHE 46 126 126 PHE PHE E . n C 3 47 THR 47 127 127 THR THR E . n C 3 48 TRP 48 128 128 TRP TRP E . n C 3 49 THR 49 129 129 THR THR E . n C 3 50 GLN 50 130 130 GLN GLN E . n C 3 51 MET 51 131 131 MET MET E . n C 3 52 CYS 52 132 132 CYS CYS E . n C 3 53 ASP 53 133 133 ASP ASP E . n C 3 54 ILE 54 134 134 ILE ILE E . n C 3 55 LYS 55 135 135 LYS LYS E . n C 3 56 ASP 56 136 136 ASP ASP E . n C 3 57 VAL 57 137 137 VAL VAL E . n C 3 58 LYS 58 138 138 LYS LYS E . n C 3 59 VAL 59 139 139 VAL VAL E . n C 3 60 VAL 60 140 140 VAL VAL E . n C 3 61 ILE 61 141 141 ILE ILE E . n C 3 62 LEU 62 142 142 LEU LEU E . n C 3 63 GLY 63 143 143 GLY GLY E . n C 3 64 GLN 64 144 144 GLN GLN E . n C 3 65 ASP 65 145 145 ASP ASP E . n C 3 66 PRO 66 146 146 PRO PRO E . n C 3 67 TYR 67 147 147 TYR TYR E . n C 3 68 HIS 68 148 148 HIS HIS E . n C 3 69 GLY 69 149 149 GLY GLY E . n C 3 70 PRO 70 150 150 PRO PRO E . n C 3 71 ASN 71 151 151 ASN ASN E . n C 3 72 GLN 72 152 152 GLN GLN E . n C 3 73 ALA 73 153 153 ALA ALA E . n C 3 74 HIS 74 154 154 HIS HIS E . n C 3 75 GLY 75 155 155 GLY GLY E . n C 3 76 LEU 76 156 156 LEU LEU E . n C 3 77 CYS 77 157 157 CYS CYS E . n C 3 78 PHE 78 158 158 PHE PHE E . n C 3 79 SER 79 159 159 SER SER E . n C 3 80 VAL 80 160 160 VAL VAL E . n C 3 81 GLN 81 161 161 GLN GLN E . n C 3 82 ARG 82 162 162 ARG ARG E . n C 3 83 PRO 83 163 163 PRO PRO E . n C 3 84 VAL 84 164 164 VAL VAL E . n C 3 85 PRO 85 165 165 PRO PRO E . n C 3 86 PRO 86 166 166 PRO PRO E . n C 3 87 PRO 87 167 167 PRO PRO E . n C 3 88 PRO 88 168 168 PRO PRO E . n C 3 89 SER 89 169 169 SER SER E . n C 3 90 LEU 90 170 170 LEU LEU E . n C 3 91 GLU 91 171 171 GLU GLU E . n C 3 92 ASN 92 172 172 ASN ASN E . n C 3 93 ILE 93 173 173 ILE ILE E . n C 3 94 TYR 94 174 174 TYR TYR E . n C 3 95 LYS 95 175 175 LYS LYS E . n C 3 96 GLU 96 176 176 GLU GLU E . n C 3 97 LEU 97 177 177 LEU LEU E . n C 3 98 SER 98 178 178 SER SER E . n C 3 99 THR 99 179 179 THR THR E . n C 3 100 ASP 100 180 180 ASP ASP E . n C 3 101 ILE 101 181 181 ILE ILE E . n C 3 102 GLU 102 182 182 GLU GLU E . n C 3 103 ASP 103 183 183 ASP ASP E . n C 3 104 PHE 104 184 184 PHE PHE E . n C 3 105 VAL 105 185 185 VAL VAL E . n C 3 106 HIS 106 186 186 HIS HIS E . n C 3 107 PRO 107 187 187 PRO PRO E . n C 3 108 GLY 108 188 188 GLY GLY E . n C 3 109 HIS 109 189 189 HIS HIS E . n C 3 110 GLY 110 190 190 GLY GLY E . n C 3 111 ASP 111 191 191 ASP ASP E . n C 3 112 LEU 112 192 192 LEU LEU E . n C 3 113 SER 113 193 193 SER SER E . n C 3 114 GLY 114 194 194 GLY GLY E . n C 3 115 TRP 115 195 195 TRP TRP E . n C 3 116 ALA 116 196 196 ALA ALA E . n C 3 117 LYS 117 197 197 LYS LYS E . n C 3 118 GLN 118 198 198 GLN GLN E . n C 3 119 GLY 119 199 199 GLY GLY E . n C 3 120 VAL 120 200 200 VAL VAL E . n C 3 121 LEU 121 201 201 LEU LEU E . n C 3 122 LEU 122 202 202 LEU LEU E . n C 3 123 LEU 123 203 203 LEU LEU E . n C 3 124 ASN 124 204 204 ASN ASN E . n C 3 125 ALA 125 205 205 ALA ALA E . n C 3 126 VAL 126 206 206 VAL VAL E . n C 3 127 LEU 127 207 207 LEU LEU E . n C 3 128 THR 128 208 208 THR THR E . n C 3 129 VAL 129 209 209 VAL VAL E . n C 3 130 ARG 130 210 210 ARG ARG E . n C 3 131 ALA 131 211 211 ALA ALA E . n C 3 132 HIS 132 212 212 HIS HIS E . n C 3 133 GLN 133 213 213 GLN GLN E . n C 3 134 ALA 134 214 214 ALA ALA E . n C 3 135 ASN 135 215 215 ASN ASN E . n C 3 136 SER 136 216 216 SER SER E . n C 3 137 HIS 137 217 217 HIS HIS E . n C 3 138 LYS 138 218 218 LYS LYS E . n C 3 139 GLU 139 219 219 GLU GLU E . n C 3 140 ARG 140 220 220 ARG ARG E . n C 3 141 GLY 141 221 221 GLY GLY E . n C 3 142 TRP 142 222 222 TRP TRP E . n C 3 143 GLU 143 223 223 GLU GLU E . n C 3 144 GLN 144 224 224 GLN GLN E . n C 3 145 PHE 145 225 225 PHE PHE E . n C 3 146 THR 146 226 226 THR THR E . n C 3 147 ASP 147 227 227 ASP ASP E . n C 3 148 ALA 148 228 228 ALA ALA E . n C 3 149 VAL 149 229 229 VAL VAL E . n C 3 150 VAL 150 230 230 VAL VAL E . n C 3 151 SER 151 231 231 SER SER E . n C 3 152 TRP 152 232 232 TRP TRP E . n C 3 153 LEU 153 233 233 LEU LEU E . n C 3 154 ASN 154 234 234 ASN ASN E . n C 3 155 GLN 155 235 235 GLN GLN E . n C 3 156 ASN 156 236 236 ASN ASN E . n C 3 157 SER 157 237 237 SER SER E . n C 3 158 ASN 158 238 238 ASN ASN E . n C 3 159 GLY 159 239 239 GLY GLY E . n C 3 160 LEU 160 240 240 LEU LEU E . n C 3 161 VAL 161 241 241 VAL VAL E . n C 3 162 PHE 162 242 242 PHE PHE E . n C 3 163 LEU 163 243 243 LEU LEU E . n C 3 164 LEU 164 244 244 LEU LEU E . n C 3 165 TRP 165 245 245 TRP TRP E . n C 3 166 GLY 166 246 246 GLY GLY E . n C 3 167 SER 167 247 247 SER SER E . n C 3 168 TYR 168 248 248 TYR TYR E . n C 3 169 ALA 169 249 249 ALA ALA E . n C 3 170 GLN 170 250 250 GLN GLN E . n C 3 171 LYS 171 251 251 LYS LYS E . n C 3 172 LYS 172 252 252 LYS LYS E . n C 3 173 GLY 173 253 253 GLY GLY E . n C 3 174 SER 174 254 254 SER SER E . n C 3 175 ALA 175 255 255 ALA ALA E . n C 3 176 ILE 176 256 256 ILE ILE E . n C 3 177 ASP 177 257 257 ASP ASP E . n C 3 178 ARG 178 258 258 ARG ARG E . n C 3 179 LYS 179 259 259 LYS LYS E . n C 3 180 ARG 180 260 260 ARG ARG E . n C 3 181 HIS 181 261 261 HIS HIS E . n C 3 182 HIS 182 262 262 HIS HIS E . n C 3 183 VAL 183 263 263 VAL VAL E . n C 3 184 LEU 184 264 264 LEU LEU E . n C 3 185 GLN 185 265 265 GLN GLN E . n C 3 186 THR 186 266 266 THR THR E . n C 3 187 ALA 187 267 267 ALA ALA E . n C 3 188 HIS 188 268 268 HIS HIS E . n C 3 189 PRO 189 269 269 PRO PRO E . n C 3 190 SER 190 270 270 SER SER E . n C 3 191 PRO 191 271 271 PRO PRO E . n C 3 192 LEU 192 272 272 LEU LEU E . n C 3 193 SER 193 273 273 SER SER E . n C 3 194 VAL 194 274 274 VAL VAL E . n C 3 195 TYR 195 275 275 TYR TYR E . n C 3 196 ARG 196 276 276 ARG ARG E . n C 3 197 GLY 197 277 277 GLY GLY E . n C 3 198 PHE 198 278 278 PHE PHE E . n C 3 199 PHE 199 279 279 PHE PHE E . n C 3 200 GLY 200 280 280 GLY GLY E . n C 3 201 CYS 201 281 281 CYS CYS E . n C 3 202 ARG 202 282 282 ARG ARG E . n C 3 203 HIS 203 283 283 HIS HIS E . n C 3 204 PHE 204 284 284 PHE PHE E . n C 3 205 SER 205 285 285 SER SER E . n C 3 206 LYS 206 286 286 LYS LYS E . n C 3 207 THR 207 287 287 THR THR E . n C 3 208 ASN 208 288 288 ASN ASN E . n C 3 209 GLU 209 289 289 GLU GLU E . n C 3 210 LEU 210 290 290 LEU LEU E . n C 3 211 LEU 211 291 291 LEU LEU E . n C 3 212 GLN 212 292 292 GLN GLN E . n C 3 213 LYS 213 293 293 LYS LYS E . n C 3 214 SER 214 294 294 SER SER E . n C 3 215 GLY 215 295 295 GLY GLY E . n C 3 216 LYS 216 296 296 LYS LYS E . n C 3 217 LYS 217 297 297 LYS LYS E . n C 3 218 PRO 218 298 298 PRO PRO E . n C 3 219 ILE 219 299 299 ILE ILE E . n C 3 220 ASP 220 300 300 ASP ASP E . n C 3 221 TRP 221 301 301 TRP TRP E . n C 3 222 LYS 222 302 302 LYS LYS E . n C 3 223 GLU 223 303 303 GLU GLU E . n C 3 224 LEU 224 304 304 LEU LEU E . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id RP5 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id RP5 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA 1 401 1 CA CA E . E 5 HOH 1 101 152 HOH HOH A . E 5 HOH 2 102 276 HOH HOH A . E 5 HOH 3 103 51 HOH HOH A . E 5 HOH 4 104 303 HOH HOH A . E 5 HOH 5 105 5 HOH HOH A . E 5 HOH 6 106 29 HOH HOH A . E 5 HOH 7 107 24 HOH HOH A . E 5 HOH 8 108 144 HOH HOH A . E 5 HOH 9 109 351 HOH HOH A . E 5 HOH 10 110 19 HOH HOH A . E 5 HOH 11 111 253 HOH HOH A . E 5 HOH 12 112 64 HOH HOH A . E 5 HOH 13 113 197 HOH HOH A . E 5 HOH 14 114 344 HOH HOH A . E 5 HOH 15 115 149 HOH HOH A . E 5 HOH 16 116 163 HOH HOH A . E 5 HOH 17 117 84 HOH HOH A . E 5 HOH 18 118 31 HOH HOH A . E 5 HOH 19 119 279 HOH HOH A . E 5 HOH 20 120 92 HOH HOH A . E 5 HOH 21 121 141 HOH HOH A . E 5 HOH 22 122 224 HOH HOH A . E 5 HOH 23 123 242 HOH HOH A . E 5 HOH 24 124 355 HOH HOH A . E 5 HOH 25 125 216 HOH HOH A . E 5 HOH 26 126 298 HOH HOH A . E 5 HOH 27 127 299 HOH HOH A . F 5 HOH 1 101 95 HOH HOH B . F 5 HOH 2 102 172 HOH HOH B . F 5 HOH 3 103 70 HOH HOH B . F 5 HOH 4 104 67 HOH HOH B . F 5 HOH 5 105 109 HOH HOH B . F 5 HOH 6 106 302 HOH HOH B . F 5 HOH 7 107 345 HOH HOH B . F 5 HOH 8 108 259 HOH HOH B . F 5 HOH 9 109 103 HOH HOH B . F 5 HOH 10 110 47 HOH HOH B . F 5 HOH 11 111 329 HOH HOH B . F 5 HOH 12 112 82 HOH HOH B . F 5 HOH 13 113 137 HOH HOH B . F 5 HOH 14 114 313 HOH HOH B . F 5 HOH 15 115 352 HOH HOH B . F 5 HOH 16 116 206 HOH HOH B . F 5 HOH 17 117 97 HOH HOH B . F 5 HOH 18 118 346 HOH HOH B . F 5 HOH 19 119 251 HOH HOH B . F 5 HOH 20 120 60 HOH HOH B . F 5 HOH 21 121 188 HOH HOH B . F 5 HOH 22 122 183 HOH HOH B . F 5 HOH 23 123 213 HOH HOH B . F 5 HOH 24 124 261 HOH HOH B . F 5 HOH 25 125 314 HOH HOH B . F 5 HOH 26 126 161 HOH HOH B . F 5 HOH 27 127 181 HOH HOH B . F 5 HOH 28 128 297 HOH HOH B . F 5 HOH 29 129 305 HOH HOH B . F 5 HOH 30 130 278 HOH HOH B . F 5 HOH 31 131 322 HOH HOH B . G 5 HOH 1 501 91 HOH HOH E . G 5 HOH 2 502 133 HOH HOH E . G 5 HOH 3 503 93 HOH HOH E . G 5 HOH 4 504 339 HOH HOH E . G 5 HOH 5 505 193 HOH HOH E . G 5 HOH 6 506 33 HOH HOH E . G 5 HOH 7 507 143 HOH HOH E . G 5 HOH 8 508 135 HOH HOH E . G 5 HOH 9 509 180 HOH HOH E . G 5 HOH 10 510 52 HOH HOH E . G 5 HOH 11 511 88 HOH HOH E . G 5 HOH 12 512 255 HOH HOH E . G 5 HOH 13 513 39 HOH HOH E . G 5 HOH 14 514 8 HOH HOH E . G 5 HOH 15 515 203 HOH HOH E . G 5 HOH 16 516 45 HOH HOH E . G 5 HOH 17 517 229 HOH HOH E . G 5 HOH 18 518 58 HOH HOH E . G 5 HOH 19 519 150 HOH HOH E . G 5 HOH 20 520 316 HOH HOH E . G 5 HOH 21 521 90 HOH HOH E . G 5 HOH 22 522 139 HOH HOH E . G 5 HOH 23 523 69 HOH HOH E . G 5 HOH 24 524 171 HOH HOH E . G 5 HOH 25 525 156 HOH HOH E . G 5 HOH 26 526 56 HOH HOH E . G 5 HOH 27 527 77 HOH HOH E . G 5 HOH 28 528 289 HOH HOH E . G 5 HOH 29 529 43 HOH HOH E . G 5 HOH 30 530 347 HOH HOH E . G 5 HOH 31 531 80 HOH HOH E . G 5 HOH 32 532 175 HOH HOH E . G 5 HOH 33 533 127 HOH HOH E . G 5 HOH 34 534 74 HOH HOH E . G 5 HOH 35 535 11 HOH HOH E . G 5 HOH 36 536 166 HOH HOH E . G 5 HOH 37 537 342 HOH HOH E . G 5 HOH 38 538 4 HOH HOH E . G 5 HOH 39 539 217 HOH HOH E . G 5 HOH 40 540 104 HOH HOH E . G 5 HOH 41 541 207 HOH HOH E . G 5 HOH 42 542 57 HOH HOH E . G 5 HOH 43 543 210 HOH HOH E . G 5 HOH 44 544 72 HOH HOH E . G 5 HOH 45 545 131 HOH HOH E . G 5 HOH 46 546 138 HOH HOH E . G 5 HOH 47 547 36 HOH HOH E . G 5 HOH 48 548 189 HOH HOH E . G 5 HOH 49 549 234 HOH HOH E . G 5 HOH 50 550 237 HOH HOH E . G 5 HOH 51 551 3 HOH HOH E . G 5 HOH 52 552 35 HOH HOH E . G 5 HOH 53 553 115 HOH HOH E . G 5 HOH 54 554 86 HOH HOH E . G 5 HOH 55 555 99 HOH HOH E . G 5 HOH 56 556 62 HOH HOH E . G 5 HOH 57 557 130 HOH HOH E . G 5 HOH 58 558 114 HOH HOH E . G 5 HOH 59 559 159 HOH HOH E . G 5 HOH 60 560 9 HOH HOH E . G 5 HOH 61 561 13 HOH HOH E . G 5 HOH 62 562 2 HOH HOH E . G 5 HOH 63 563 96 HOH HOH E . G 5 HOH 64 564 348 HOH HOH E . G 5 HOH 65 565 105 HOH HOH E . G 5 HOH 66 566 38 HOH HOH E . G 5 HOH 67 567 14 HOH HOH E . G 5 HOH 68 568 54 HOH HOH E . G 5 HOH 69 569 83 HOH HOH E . G 5 HOH 70 570 18 HOH HOH E . G 5 HOH 71 571 330 HOH HOH E . G 5 HOH 72 572 7 HOH HOH E . G 5 HOH 73 573 151 HOH HOH E . G 5 HOH 74 574 101 HOH HOH E . G 5 HOH 75 575 21 HOH HOH E . G 5 HOH 76 576 199 HOH HOH E . G 5 HOH 77 577 46 HOH HOH E . G 5 HOH 78 578 365 HOH HOH E . G 5 HOH 79 579 364 HOH HOH E . G 5 HOH 80 580 41 HOH HOH E . G 5 HOH 81 581 106 HOH HOH E . G 5 HOH 82 582 40 HOH HOH E . G 5 HOH 83 583 309 HOH HOH E . G 5 HOH 84 584 124 HOH HOH E . G 5 HOH 85 585 17 HOH HOH E . G 5 HOH 86 586 123 HOH HOH E . G 5 HOH 87 587 68 HOH HOH E . G 5 HOH 88 588 235 HOH HOH E . G 5 HOH 89 589 48 HOH HOH E . G 5 HOH 90 590 49 HOH HOH E . G 5 HOH 91 591 250 HOH HOH E . G 5 HOH 92 592 162 HOH HOH E . G 5 HOH 93 593 132 HOH HOH E . G 5 HOH 94 594 1 HOH HOH E . G 5 HOH 95 595 76 HOH HOH E . G 5 HOH 96 596 10 HOH HOH E . G 5 HOH 97 597 361 HOH HOH E . G 5 HOH 98 598 129 HOH HOH E . G 5 HOH 99 599 110 HOH HOH E . G 5 HOH 100 600 61 HOH HOH E . G 5 HOH 101 601 354 HOH HOH E . G 5 HOH 102 602 75 HOH HOH E . G 5 HOH 103 603 128 HOH HOH E . G 5 HOH 104 604 79 HOH HOH E . G 5 HOH 105 605 215 HOH HOH E . G 5 HOH 106 606 277 HOH HOH E . G 5 HOH 107 607 71 HOH HOH E . G 5 HOH 108 608 134 HOH HOH E . G 5 HOH 109 609 27 HOH HOH E . G 5 HOH 110 610 328 HOH HOH E . G 5 HOH 111 611 85 HOH HOH E . G 5 HOH 112 612 12 HOH HOH E . G 5 HOH 113 613 119 HOH HOH E . G 5 HOH 114 614 164 HOH HOH E . G 5 HOH 115 615 257 HOH HOH E . G 5 HOH 116 616 191 HOH HOH E . G 5 HOH 117 617 310 HOH HOH E . G 5 HOH 118 618 173 HOH HOH E . G 5 HOH 119 619 120 HOH HOH E . G 5 HOH 120 620 307 HOH HOH E . G 5 HOH 121 621 34 HOH HOH E . G 5 HOH 122 622 300 HOH HOH E . G 5 HOH 123 623 98 HOH HOH E . G 5 HOH 124 624 22 HOH HOH E . G 5 HOH 125 625 23 HOH HOH E . G 5 HOH 126 626 317 HOH HOH E . G 5 HOH 127 627 176 HOH HOH E . G 5 HOH 128 628 186 HOH HOH E . G 5 HOH 129 629 226 HOH HOH E . G 5 HOH 130 630 121 HOH HOH E . G 5 HOH 131 631 136 HOH HOH E . G 5 HOH 132 632 125 HOH HOH E . G 5 HOH 133 633 146 HOH HOH E . G 5 HOH 134 634 30 HOH HOH E . G 5 HOH 135 635 247 HOH HOH E . G 5 HOH 136 636 174 HOH HOH E . G 5 HOH 137 637 63 HOH HOH E . G 5 HOH 138 638 81 HOH HOH E . G 5 HOH 139 639 87 HOH HOH E . G 5 HOH 140 640 306 HOH HOH E . G 5 HOH 141 641 209 HOH HOH E . G 5 HOH 142 642 102 HOH HOH E . G 5 HOH 143 643 220 HOH HOH E . G 5 HOH 144 644 360 HOH HOH E . G 5 HOH 145 645 308 HOH HOH E . G 5 HOH 146 646 170 HOH HOH E . G 5 HOH 147 647 359 HOH HOH E . G 5 HOH 148 648 147 HOH HOH E . G 5 HOH 149 649 343 HOH HOH E . G 5 HOH 150 650 323 HOH HOH E . G 5 HOH 151 651 65 HOH HOH E . G 5 HOH 152 652 37 HOH HOH E . G 5 HOH 153 653 16 HOH HOH E . G 5 HOH 154 654 50 HOH HOH E . G 5 HOH 155 655 73 HOH HOH E . G 5 HOH 156 656 236 HOH HOH E . G 5 HOH 157 657 294 HOH HOH E . G 5 HOH 158 658 178 HOH HOH E . G 5 HOH 159 659 66 HOH HOH E . G 5 HOH 160 660 356 HOH HOH E . G 5 HOH 161 661 219 HOH HOH E . G 5 HOH 162 662 32 HOH HOH E . G 5 HOH 163 663 20 HOH HOH E . G 5 HOH 164 664 350 HOH HOH E . G 5 HOH 165 665 243 HOH HOH E . G 5 HOH 166 666 59 HOH HOH E . G 5 HOH 167 667 201 HOH HOH E . G 5 HOH 168 668 26 HOH HOH E . G 5 HOH 169 669 258 HOH HOH E . G 5 HOH 170 670 184 HOH HOH E . G 5 HOH 171 671 53 HOH HOH E . G 5 HOH 172 672 169 HOH HOH E . G 5 HOH 173 673 268 HOH HOH E . G 5 HOH 174 674 89 HOH HOH E . G 5 HOH 175 675 286 HOH HOH E . G 5 HOH 176 676 107 HOH HOH E . G 5 HOH 177 677 349 HOH HOH E . G 5 HOH 178 678 94 HOH HOH E . G 5 HOH 179 679 28 HOH HOH E . G 5 HOH 180 680 194 HOH HOH E . G 5 HOH 181 681 340 HOH HOH E . G 5 HOH 182 682 211 HOH HOH E . G 5 HOH 183 683 148 HOH HOH E . G 5 HOH 184 684 320 HOH HOH E . G 5 HOH 185 685 200 HOH HOH E . G 5 HOH 186 686 122 HOH HOH E . G 5 HOH 187 687 267 HOH HOH E . G 5 HOH 188 688 271 HOH HOH E . G 5 HOH 189 689 145 HOH HOH E . G 5 HOH 190 690 227 HOH HOH E . G 5 HOH 191 691 319 HOH HOH E . G 5 HOH 192 692 358 HOH HOH E . G 5 HOH 193 693 78 HOH HOH E . G 5 HOH 194 694 252 HOH HOH E . G 5 HOH 195 695 232 HOH HOH E . G 5 HOH 196 696 256 HOH HOH E . G 5 HOH 197 697 290 HOH HOH E . G 5 HOH 198 698 312 HOH HOH E . G 5 HOH 199 699 353 HOH HOH E . G 5 HOH 200 700 335 HOH HOH E . G 5 HOH 201 701 324 HOH HOH E . G 5 HOH 202 702 222 HOH HOH E . G 5 HOH 203 703 288 HOH HOH E . G 5 HOH 204 704 111 HOH HOH E . G 5 HOH 205 705 221 HOH HOH E . G 5 HOH 206 706 254 HOH HOH E . G 5 HOH 207 707 246 HOH HOH E . G 5 HOH 208 708 204 HOH HOH E . G 5 HOH 209 709 167 HOH HOH E . G 5 HOH 210 710 265 HOH HOH E . G 5 HOH 211 711 113 HOH HOH E . G 5 HOH 212 712 140 HOH HOH E . G 5 HOH 213 713 158 HOH HOH E . G 5 HOH 214 714 112 HOH HOH E . G 5 HOH 215 715 218 HOH HOH E . G 5 HOH 216 716 367 HOH HOH E . G 5 HOH 217 717 245 HOH HOH E . G 5 HOH 218 718 190 HOH HOH E . G 5 HOH 219 719 154 HOH HOH E . G 5 HOH 220 720 100 HOH HOH E . G 5 HOH 221 721 331 HOH HOH E . G 5 HOH 222 722 325 HOH HOH E . G 5 HOH 223 723 126 HOH HOH E . G 5 HOH 224 724 117 HOH HOH E . G 5 HOH 225 725 187 HOH HOH E . G 5 HOH 226 726 233 HOH HOH E . G 5 HOH 227 727 205 HOH HOH E . G 5 HOH 228 728 177 HOH HOH E . G 5 HOH 229 729 338 HOH HOH E . G 5 HOH 230 730 192 HOH HOH E . G 5 HOH 231 731 195 HOH HOH E . G 5 HOH 232 732 280 HOH HOH E . G 5 HOH 233 733 248 HOH HOH E . G 5 HOH 234 734 321 HOH HOH E . G 5 HOH 235 735 168 HOH HOH E . G 5 HOH 236 736 142 HOH HOH E . G 5 HOH 237 737 228 HOH HOH E . G 5 HOH 238 738 108 HOH HOH E . G 5 HOH 239 739 260 HOH HOH E . G 5 HOH 240 740 244 HOH HOH E . G 5 HOH 241 741 362 HOH HOH E . G 5 HOH 242 742 225 HOH HOH E . G 5 HOH 243 743 202 HOH HOH E . G 5 HOH 244 744 116 HOH HOH E . G 5 HOH 245 745 327 HOH HOH E . G 5 HOH 246 746 182 HOH HOH E . G 5 HOH 247 747 42 HOH HOH E . G 5 HOH 248 748 337 HOH HOH E . G 5 HOH 249 749 326 HOH HOH E . G 5 HOH 250 750 366 HOH HOH E . G 5 HOH 251 751 363 HOH HOH E . G 5 HOH 252 752 304 HOH HOH E . G 5 HOH 253 753 238 HOH HOH E . G 5 HOH 254 754 165 HOH HOH E . G 5 HOH 255 755 283 HOH HOH E . G 5 HOH 256 756 334 HOH HOH E . G 5 HOH 257 757 185 HOH HOH E . G 5 HOH 258 758 295 HOH HOH E . G 5 HOH 259 759 296 HOH HOH E . G 5 HOH 260 760 239 HOH HOH E . G 5 HOH 261 761 287 HOH HOH E . G 5 HOH 262 762 157 HOH HOH E . G 5 HOH 263 763 357 HOH HOH E . G 5 HOH 264 764 291 HOH HOH E . G 5 HOH 265 765 292 HOH HOH E . G 5 HOH 266 766 293 HOH HOH E . G 5 HOH 267 767 241 HOH HOH E . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9LNP _cell.details ? _cell.formula_units_Z ? _cell.length_a 48.930 _cell.length_a_esd ? _cell.length_b 65.290 _cell.length_b_esd ? _cell.length_c 99.530 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9LNP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9LNP _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51.66 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% polyethylene glycol 4000 (Sigma)/100 mM Hepes buffer (pH 6.5)/10% dioxane/1 mM DTT' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 283 # _diffrn.ambient_environment ? _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 S 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-07-04 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979183 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL02U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979183 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL02U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate 25.170 _reflns.entry_id 9LNP _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.760 _reflns.d_resolution_low 19.940 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 414484 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.900 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.26 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.186 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.76 _reflns_shell.d_res_low 1.81 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2307 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.430 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 92.530 _refine.B_iso_mean 33.4762 _refine.B_iso_min 16.370 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9LNP _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.7600 _refine.ls_d_res_low 19.7900 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 60661 _refine.ls_number_reflns_R_free 2939 _refine.ls_number_reflns_R_work 57722 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.4000 _refine.ls_percent_reflns_R_free 4.8400 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1700 _refine.ls_R_factor_R_free 0.2075 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1681 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 23.1900 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2400 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.7600 _refine_hist.d_res_low 19.7900 _refine_hist.number_atoms_solvent 325 _refine_hist.number_atoms_total 2510 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 243 _refine_hist.pdbx_B_iso_mean_ligand 35.93 _refine_hist.pdbx_B_iso_mean_solvent 40.22 _refine_hist.pdbx_number_atoms_protein 1807 _refine_hist.pdbx_number_atoms_nucleic_acid 377 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.7600 1.7900 2732 . 132 2600 94.0000 . . . 0.0000 0.3385 . . . . . . . 21 . . . 0.3894 'X-RAY DIFFRACTION' 1.7900 1.8200 2890 . 148 2742 98.0000 . . . 0.0000 0.3166 . . . . . . . 21 . . . 0.3592 'X-RAY DIFFRACTION' 1.8200 1.8500 2883 . 165 2718 100.0000 . . . 0.0000 0.2806 . . . . . . . 21 . . . 0.3077 'X-RAY DIFFRACTION' 1.8500 1.8900 2889 . 144 2745 99.0000 . . . 0.0000 0.2729 . . . . . . . 21 . . . 0.2971 'X-RAY DIFFRACTION' 1.8900 1.9300 2881 . 126 2755 100.0000 . . . 0.0000 0.2712 . . . . . . . 21 . . . 0.3326 'X-RAY DIFFRACTION' 1.9300 1.9700 2858 . 146 2712 99.0000 . . . 0.0000 0.2477 . . . . . . . 21 . . . 0.3005 'X-RAY DIFFRACTION' 1.9700 2.0100 2910 . 135 2775 100.0000 . . . 0.0000 0.2232 . . . . . . . 21 . . . 0.2378 'X-RAY DIFFRACTION' 2.0100 2.0600 2855 . 140 2715 99.0000 . . . 0.0000 0.2042 . . . . . . . 21 . . . 0.2475 'X-RAY DIFFRACTION' 2.0600 2.1200 2922 . 130 2792 100.0000 . . . 0.0000 0.1925 . . . . . . . 21 . . . 0.2402 'X-RAY DIFFRACTION' 2.1200 2.1800 2907 . 134 2773 100.0000 . . . 0.0000 0.1877 . . . . . . . 21 . . . 0.2441 'X-RAY DIFFRACTION' 2.1800 2.2500 2910 . 119 2791 100.0000 . . . 0.0000 0.1731 . . . . . . . 21 . . . 0.2107 'X-RAY DIFFRACTION' 2.2500 2.3300 2925 . 150 2775 100.0000 . . . 0.0000 0.1693 . . . . . . . 21 . . . 0.2044 'X-RAY DIFFRACTION' 2.3300 2.4300 2888 . 121 2767 100.0000 . . . 0.0000 0.1630 . . . . . . . 21 . . . 0.2223 'X-RAY DIFFRACTION' 2.4300 2.5400 2884 . 150 2734 100.0000 . . . 0.0000 0.1686 . . . . . . . 21 . . . 0.2116 'X-RAY DIFFRACTION' 2.5400 2.6700 2881 . 132 2749 100.0000 . . . 0.0000 0.1620 . . . . . . . 21 . . . 0.1979 'X-RAY DIFFRACTION' 2.6700 2.8400 2937 . 127 2810 100.0000 . . . 0.0000 0.1750 . . . . . . . 21 . . . 0.2189 'X-RAY DIFFRACTION' 2.8400 3.0600 2902 . 160 2742 100.0000 . . . 0.0000 0.1650 . . . . . . . 21 . . . 0.2646 'X-RAY DIFFRACTION' 3.0600 3.3600 2911 . 151 2760 100.0000 . . . 0.0000 0.1468 . . . . . . . 21 . . . 0.1785 'X-RAY DIFFRACTION' 3.3600 3.8500 2901 . 159 2742 100.0000 . . . 0.0000 0.1345 . . . . . . . 21 . . . 0.1773 'X-RAY DIFFRACTION' 3.8500 4.8300 2903 . 126 2777 100.0000 . . . 0.0000 0.1188 . . . . . . . 21 . . . 0.1348 'X-RAY DIFFRACTION' 4.8300 19.7900 2892 . 144 2748 99.0000 . . . 0.0000 0.1487 . . . . . . . 21 . . . 0.1640 # _struct.entry_id 9LNP _struct.title 'the hUNG bound to DNA product embedding uridine ribonucleotide' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9LNP _struct_keywords.text ;uracil DNA glycosylase uridine ribonucleotide DNA damage base excision repair, DNA BINDING PROTEIN/DNA, DNA BINDING PROTEIN-DNA complex ; _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9LNP 9LNP ? 1 ? 1 2 PDB 9LNP 9LNP ? 2 ? 1 3 UNP UNG_HUMAN P13051 ? 3 ;FGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPV PPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLL WGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL ; 94 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9LNP A 1 ? 9 ? 9LNP 2 ? 10 ? 2 10 2 2 9LNP B 1 ? 10 ? 9LNP 1 ? 10 ? 1 10 3 3 9LNP E 5 ? 224 ? P13051 94 ? 313 ? 85 304 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 9LNP GLY E 1 ? UNP P13051 ? ? 'expression tag' 81 1 3 9LNP SER E 2 ? UNP P13051 ? ? 'expression tag' 82 2 3 9LNP HIS E 3 ? UNP P13051 ? ? 'expression tag' 83 3 3 9LNP MET E 4 ? UNP P13051 ? ? 'expression tag' 84 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2780 ? 1 MORE -18 ? 1 'SSA (A^2)' 12620 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY C 6 ? SER C 14 ? GLY E 86 SER E 94 1 ? 9 HELX_P HELX_P2 AA2 GLY C 15 ? GLY C 18 ? GLY E 95 GLY E 98 5 ? 4 HELX_P HELX_P3 AA3 LYS C 19 ? TYR C 36 ? LYS E 99 TYR E 116 1 ? 18 HELX_P HELX_P4 AA4 PRO C 41 ? VAL C 45 ? PRO E 121 VAL E 125 5 ? 5 HELX_P HELX_P5 AA5 PHE C 46 ? GLN C 50 ? PHE E 126 GLN E 130 5 ? 5 HELX_P HELX_P6 AA6 ASP C 53 ? VAL C 57 ? ASP E 133 VAL E 137 5 ? 5 HELX_P HELX_P7 AA7 PRO C 87 ? ILE C 101 ? PRO E 167 ILE E 181 1 ? 15 HELX_P HELX_P8 AA8 LEU C 112 ? GLN C 118 ? LEU E 192 GLN E 198 1 ? 7 HELX_P HELX_P9 AA9 GLY C 141 ? SER C 157 ? GLY E 221 SER E 237 1 ? 17 HELX_P HELX_P10 AB1 GLY C 166 ? LYS C 171 ? GLY E 246 LYS E 251 1 ? 6 HELX_P HELX_P11 AB2 LYS C 172 ? ILE C 176 ? LYS E 252 ILE E 256 5 ? 5 HELX_P HELX_P12 AB3 ARG C 202 ? SER C 214 ? ARG E 282 SER E 294 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A DT 3 "O3'" ? ? ? 1_555 A RP5 4 "P'" ? ? A DT 4 A RP5 5 1_555 ? ? ? ? ? ? ? 1.559 ? ? covale2 covale both ? A RP5 4 O3 ? ? ? 1_555 A DA 5 P ? ? A RP5 5 A DA 6 1_555 ? ? ? ? ? ? ? 1.547 ? ? metalc1 metalc ? ? E HOH . O ? ? ? 1_555 D CA . CA ? ? A HOH 114 E CA 401 1_555 ? ? ? ? ? ? ? 2.885 ? ? hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 B DA 10 N1 ? ? A DT 2 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 B DA 10 N6 ? ? A DT 2 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 3 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 3 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 3 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 4 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 4 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 6 N3 ? ? A DA 6 B DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 6 O4 ? ? A DA 6 B DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 7 B DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 5 N6 ? ? A DT 7 B DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 8 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 8 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 8 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 9 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 9 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 2 N1 ? ? A DT 10 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 2 N6 ? ? A DT 10 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 39 C . ? TYR 119 E PRO 40 C ? PRO 120 E 1 -6.71 2 ARG 82 C . ? ARG 162 E PRO 83 C ? PRO 163 E 1 4.36 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL C 38 ? TYR C 39 ? VAL E 118 TYR E 119 AA1 2 VAL C 129 ? ARG C 130 ? VAL E 209 ARG E 210 AA2 1 VAL C 120 ? ASN C 124 ? VAL E 200 ASN E 204 AA2 2 VAL C 59 ? GLY C 63 ? VAL E 139 GLY E 143 AA2 3 VAL C 161 ? TRP C 165 ? VAL E 241 TRP E 245 AA2 4 HIS C 182 ? THR C 186 ? HIS E 262 THR E 266 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR C 39 ? N TYR E 119 O VAL C 129 ? O VAL E 209 AA2 1 2 O LEU C 121 ? O LEU E 201 N VAL C 59 ? N VAL E 139 AA2 2 3 N VAL C 60 ? N VAL E 140 O LEU C 163 ? O LEU E 243 AA2 3 4 N PHE C 162 ? N PHE E 242 O HIS C 182 ? O HIS E 262 # _pdbx_entry_details.entry_id 9LNP _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O E HOH 701 ? ? O E HOH 716 ? ? 2.05 2 1 OE2 E GLU 219 ? ? O E HOH 501 ? ? 2.08 3 1 O E HOH 674 ? ? O E HOH 703 ? ? 2.15 4 1 O B HOH 118 ? ? O B HOH 126 ? ? 2.17 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" A DT 9 ? ? "C3'" A DT 9 ? ? 1.360 1.419 -0.059 0.006 N 2 1 "O3'" B DA 2 ? ? "C3'" B DA 2 ? ? 1.356 1.419 -0.063 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? N9 B DA 2 ? ? 110.24 108.30 1.94 0.30 N 2 1 "O4'" B DC 9 ? ? "C1'" B DC 9 ? ? N1 B DC 9 ? ? 110.99 108.30 2.69 0.30 N 3 1 "O4'" B DA 10 ? ? "C1'" B DA 10 ? ? N9 B DA 10 ? ? 110.12 108.30 1.82 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN E 152 ? ? -98.06 -75.00 2 1 HIS E 154 ? ? -140.29 23.07 3 1 PHE E 158 ? ? 77.90 -3.86 4 1 HIS E 212 ? ? 70.28 -0.59 5 1 ARG E 260 ? ? -130.91 -31.51 6 1 SER E 273 ? ? -140.12 -6.24 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 127 ? 6.72 . 2 1 O ? E HOH 761 ? 5.83 . 3 1 O ? E HOH 762 ? 5.89 . 4 1 O ? E HOH 763 ? 5.91 . 5 1 O ? E HOH 764 ? 6.19 . 6 1 O ? E HOH 765 ? 8.01 . 7 1 O ? E HOH 766 ? 8.07 . 8 1 O ? E HOH 767 ? 8.70 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DT OP3 O N N 196 DT P P N N 197 DT OP1 O N N 198 DT OP2 O N N 199 DT "O5'" O N N 200 DT "C5'" C N N 201 DT "C4'" C N R 202 DT "O4'" O N N 203 DT "C3'" C N S 204 DT "O3'" O N N 205 DT "C2'" C N N 206 DT "C1'" C N R 207 DT N1 N N N 208 DT C2 C N N 209 DT O2 O N N 210 DT N3 N N N 211 DT C4 C N N 212 DT O4 O N N 213 DT C5 C N N 214 DT C7 C N N 215 DT C6 C N N 216 DT HOP3 H N N 217 DT HOP2 H N N 218 DT "H5'" H N N 219 DT "H5''" H N N 220 DT "H4'" H N N 221 DT "H3'" H N N 222 DT "HO3'" H N N 223 DT "H2'" H N N 224 DT "H2''" H N N 225 DT "H1'" H N N 226 DT H3 H N N 227 DT H71 H N N 228 DT H72 H N N 229 DT H73 H N N 230 DT H6 H N N 231 GLN N N N N 232 GLN CA C N S 233 GLN C C N N 234 GLN O O N N 235 GLN CB C N N 236 GLN CG C N N 237 GLN CD C N N 238 GLN OE1 O N N 239 GLN NE2 N N N 240 GLN OXT O N N 241 GLN H H N N 242 GLN H2 H N N 243 GLN HA H N N 244 GLN HB2 H N N 245 GLN HB3 H N N 246 GLN HG2 H N N 247 GLN HG3 H N N 248 GLN HE21 H N N 249 GLN HE22 H N N 250 GLN HXT H N N 251 GLU N N N N 252 GLU CA C N S 253 GLU C C N N 254 GLU O O N N 255 GLU CB C N N 256 GLU CG C N N 257 GLU CD C N N 258 GLU OE1 O N N 259 GLU OE2 O N N 260 GLU OXT O N N 261 GLU H H N N 262 GLU H2 H N N 263 GLU HA H N N 264 GLU HB2 H N N 265 GLU HB3 H N N 266 GLU HG2 H N N 267 GLU HG3 H N N 268 GLU HE2 H N N 269 GLU HXT H N N 270 GLY N N N N 271 GLY CA C N N 272 GLY C C N N 273 GLY O O N N 274 GLY OXT O N N 275 GLY H H N N 276 GLY H2 H N N 277 GLY HA2 H N N 278 GLY HA3 H N N 279 GLY HXT H N N 280 HIS N N N N 281 HIS CA C N S 282 HIS C C N N 283 HIS O O N N 284 HIS CB C N N 285 HIS CG C Y N 286 HIS ND1 N Y N 287 HIS CD2 C Y N 288 HIS CE1 C Y N 289 HIS NE2 N Y N 290 HIS OXT O N N 291 HIS H H N N 292 HIS H2 H N N 293 HIS HA H N N 294 HIS HB2 H N N 295 HIS HB3 H N N 296 HIS HD1 H N N 297 HIS HD2 H N N 298 HIS HE1 H N N 299 HIS HE2 H N N 300 HIS HXT H N N 301 HOH O O N N 302 HOH H1 H N N 303 HOH H2 H N N 304 ILE N N N N 305 ILE CA C N S 306 ILE C C N N 307 ILE O O N N 308 ILE CB C N S 309 ILE CG1 C N N 310 ILE CG2 C N N 311 ILE CD1 C N N 312 ILE OXT O N N 313 ILE H H N N 314 ILE H2 H N N 315 ILE HA H N N 316 ILE HB H N N 317 ILE HG12 H N N 318 ILE HG13 H N N 319 ILE HG21 H N N 320 ILE HG22 H N N 321 ILE HG23 H N N 322 ILE HD11 H N N 323 ILE HD12 H N N 324 ILE HD13 H N N 325 ILE HXT H N N 326 LEU N N N N 327 LEU CA C N S 328 LEU C C N N 329 LEU O O N N 330 LEU CB C N N 331 LEU CG C N N 332 LEU CD1 C N N 333 LEU CD2 C N N 334 LEU OXT O N N 335 LEU H H N N 336 LEU H2 H N N 337 LEU HA H N N 338 LEU HB2 H N N 339 LEU HB3 H N N 340 LEU HG H N N 341 LEU HD11 H N N 342 LEU HD12 H N N 343 LEU HD13 H N N 344 LEU HD21 H N N 345 LEU HD22 H N N 346 LEU HD23 H N N 347 LEU HXT H N N 348 LYS N N N N 349 LYS CA C N S 350 LYS C C N N 351 LYS O O N N 352 LYS CB C N N 353 LYS CG C N N 354 LYS CD C N N 355 LYS CE C N N 356 LYS NZ N N N 357 LYS OXT O N N 358 LYS H H N N 359 LYS H2 H N N 360 LYS HA H N N 361 LYS HB2 H N N 362 LYS HB3 H N N 363 LYS HG2 H N N 364 LYS HG3 H N N 365 LYS HD2 H N N 366 LYS HD3 H N N 367 LYS HE2 H N N 368 LYS HE3 H N N 369 LYS HZ1 H N N 370 LYS HZ2 H N N 371 LYS HZ3 H N N 372 LYS HXT H N N 373 MET N N N N 374 MET CA C N S 375 MET C C N N 376 MET O O N N 377 MET CB C N N 378 MET CG C N N 379 MET SD S N N 380 MET CE C N N 381 MET OXT O N N 382 MET H H N N 383 MET H2 H N N 384 MET HA H N N 385 MET HB2 H N N 386 MET HB3 H N N 387 MET HG2 H N N 388 MET HG3 H N N 389 MET HE1 H N N 390 MET HE2 H N N 391 MET HE3 H N N 392 MET HXT H N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 RP5 C1 C N R 434 RP5 O4 O N N 435 RP5 C2 C N R 436 RP5 O2 O N N 437 RP5 C3 C N S 438 RP5 O3 O N N 439 RP5 C4 C N R 440 RP5 C5 C N N 441 RP5 O5 O N N 442 RP5 "P'" P N N 443 RP5 O1X O N N 444 RP5 O2X O N N 445 RP5 O3X O N N 446 RP5 O1 O N N 447 RP5 H1 H N N 448 RP5 H2 H N N 449 RP5 HO2 H N N 450 RP5 H3 H N N 451 RP5 HO3 H N N 452 RP5 H4 H N N 453 RP5 H51 H N N 454 RP5 H52 H N N 455 RP5 "HO'" H N N 456 RP5 HOA H N N 457 RP5 HO1 H N N 458 SER N N N N 459 SER CA C N S 460 SER C C N N 461 SER O O N N 462 SER CB C N N 463 SER OG O N N 464 SER OXT O N N 465 SER H H N N 466 SER H2 H N N 467 SER HA H N N 468 SER HB2 H N N 469 SER HB3 H N N 470 SER HG H N N 471 SER HXT H N N 472 THR N N N N 473 THR CA C N S 474 THR C C N N 475 THR O O N N 476 THR CB C N R 477 THR OG1 O N N 478 THR CG2 C N N 479 THR OXT O N N 480 THR H H N N 481 THR H2 H N N 482 THR HA H N N 483 THR HB H N N 484 THR HG1 H N N 485 THR HG21 H N N 486 THR HG22 H N N 487 THR HG23 H N N 488 THR HXT H N N 489 TRP N N N N 490 TRP CA C N S 491 TRP C C N N 492 TRP O O N N 493 TRP CB C N N 494 TRP CG C Y N 495 TRP CD1 C Y N 496 TRP CD2 C Y N 497 TRP NE1 N Y N 498 TRP CE2 C Y N 499 TRP CE3 C Y N 500 TRP CZ2 C Y N 501 TRP CZ3 C Y N 502 TRP CH2 C Y N 503 TRP OXT O N N 504 TRP H H N N 505 TRP H2 H N N 506 TRP HA H N N 507 TRP HB2 H N N 508 TRP HB3 H N N 509 TRP HD1 H N N 510 TRP HE1 H N N 511 TRP HE3 H N N 512 TRP HZ2 H N N 513 TRP HZ3 H N N 514 TRP HH2 H N N 515 TRP HXT H N N 516 TYR N N N N 517 TYR CA C N S 518 TYR C C N N 519 TYR O O N N 520 TYR CB C N N 521 TYR CG C Y N 522 TYR CD1 C Y N 523 TYR CD2 C Y N 524 TYR CE1 C Y N 525 TYR CE2 C Y N 526 TYR CZ C Y N 527 TYR OH O N N 528 TYR OXT O N N 529 TYR H H N N 530 TYR H2 H N N 531 TYR HA H N N 532 TYR HB2 H N N 533 TYR HB3 H N N 534 TYR HD1 H N N 535 TYR HD2 H N N 536 TYR HE1 H N N 537 TYR HE2 H N N 538 TYR HH H N N 539 TYR HXT H N N 540 VAL N N N N 541 VAL CA C N S 542 VAL C C N N 543 VAL O O N N 544 VAL CB C N N 545 VAL CG1 C N N 546 VAL CG2 C N N 547 VAL OXT O N N 548 VAL H H N N 549 VAL H2 H N N 550 VAL HA H N N 551 VAL HB H N N 552 VAL HG11 H N N 553 VAL HG12 H N N 554 VAL HG13 H N N 555 VAL HG21 H N N 556 VAL HG22 H N N 557 VAL HG23 H N N 558 VAL HXT H N N 559 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 RP5 C1 O4 sing N N 426 RP5 C1 C2 sing N N 427 RP5 C1 O1 sing N N 428 RP5 C1 H1 sing N N 429 RP5 O4 C4 sing N N 430 RP5 C2 O2 sing N N 431 RP5 C2 C3 sing N N 432 RP5 C2 H2 sing N N 433 RP5 O2 HO2 sing N N 434 RP5 C3 O3 sing N N 435 RP5 C3 C4 sing N N 436 RP5 C3 H3 sing N N 437 RP5 O3 HO3 sing N N 438 RP5 C4 C5 sing N N 439 RP5 C4 H4 sing N N 440 RP5 C5 O5 sing N N 441 RP5 C5 H51 sing N N 442 RP5 C5 H52 sing N N 443 RP5 O5 "P'" sing N N 444 RP5 "P'" O1X doub N N 445 RP5 "P'" O2X sing N N 446 RP5 "P'" O3X sing N N 447 RP5 O2X "HO'" sing N N 448 RP5 O3X HOA sing N N 449 RP5 O1 HO1 sing N N 450 SER N CA sing N N 451 SER N H sing N N 452 SER N H2 sing N N 453 SER CA C sing N N 454 SER CA CB sing N N 455 SER CA HA sing N N 456 SER C O doub N N 457 SER C OXT sing N N 458 SER CB OG sing N N 459 SER CB HB2 sing N N 460 SER CB HB3 sing N N 461 SER OG HG sing N N 462 SER OXT HXT sing N N 463 THR N CA sing N N 464 THR N H sing N N 465 THR N H2 sing N N 466 THR CA C sing N N 467 THR CA CB sing N N 468 THR CA HA sing N N 469 THR C O doub N N 470 THR C OXT sing N N 471 THR CB OG1 sing N N 472 THR CB CG2 sing N N 473 THR CB HB sing N N 474 THR OG1 HG1 sing N N 475 THR CG2 HG21 sing N N 476 THR CG2 HG22 sing N N 477 THR CG2 HG23 sing N N 478 THR OXT HXT sing N N 479 TRP N CA sing N N 480 TRP N H sing N N 481 TRP N H2 sing N N 482 TRP CA C sing N N 483 TRP CA CB sing N N 484 TRP CA HA sing N N 485 TRP C O doub N N 486 TRP C OXT sing N N 487 TRP CB CG sing N N 488 TRP CB HB2 sing N N 489 TRP CB HB3 sing N N 490 TRP CG CD1 doub Y N 491 TRP CG CD2 sing Y N 492 TRP CD1 NE1 sing Y N 493 TRP CD1 HD1 sing N N 494 TRP CD2 CE2 doub Y N 495 TRP CD2 CE3 sing Y N 496 TRP NE1 CE2 sing Y N 497 TRP NE1 HE1 sing N N 498 TRP CE2 CZ2 sing Y N 499 TRP CE3 CZ3 doub Y N 500 TRP CE3 HE3 sing N N 501 TRP CZ2 CH2 doub Y N 502 TRP CZ2 HZ2 sing N N 503 TRP CZ3 CH2 sing Y N 504 TRP CZ3 HZ3 sing N N 505 TRP CH2 HH2 sing N N 506 TRP OXT HXT sing N N 507 TYR N CA sing N N 508 TYR N H sing N N 509 TYR N H2 sing N N 510 TYR CA C sing N N 511 TYR CA CB sing N N 512 TYR CA HA sing N N 513 TYR C O doub N N 514 TYR C OXT sing N N 515 TYR CB CG sing N N 516 TYR CB HB2 sing N N 517 TYR CB HB3 sing N N 518 TYR CG CD1 doub Y N 519 TYR CG CD2 sing Y N 520 TYR CD1 CE1 sing Y N 521 TYR CD1 HD1 sing N N 522 TYR CD2 CE2 doub Y N 523 TYR CD2 HD2 sing N N 524 TYR CE1 CZ doub Y N 525 TYR CE1 HE1 sing N N 526 TYR CE2 CZ sing Y N 527 TYR CE2 HE2 sing N N 528 TYR CZ OH sing N N 529 TYR OH HH sing N N 530 TYR OXT HXT sing N N 531 VAL N CA sing N N 532 VAL N H sing N N 533 VAL N H2 sing N N 534 VAL CA C sing N N 535 VAL CA CB sing N N 536 VAL CA HA sing N N 537 VAL C O doub N N 538 VAL C OXT sing N N 539 VAL CB CG1 sing N N 540 VAL CB CG2 sing N N 541 VAL CB HB sing N N 542 VAL CG1 HG11 sing N N 543 VAL CG1 HG12 sing N N 544 VAL CG1 HG13 sing N N 545 VAL CG2 HG21 sing N N 546 VAL CG2 HG22 sing N N 547 VAL CG2 HG23 sing N N 548 VAL OXT HXT sing N N 549 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9LNP 'double helix' 9LNP 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 1 1_555 B DA 10 1_555 0.072 -0.265 0.033 -18.267 -12.692 7.811 1 A_DT2:DA10_B A 2 ? B 10 ? 20 1 1 A DG 2 1_555 B DC 9 1_555 -0.266 -0.241 0.011 -10.410 -7.415 1.763 2 A_DG3:DC9_B A 3 ? B 9 ? 19 1 1 A DT 3 1_555 B DA 8 1_555 -0.048 -0.154 -0.289 12.524 0.054 0.053 3 A_DT4:DA8_B A 4 ? B 8 ? 20 1 1 A DA 5 1_555 B DT 6 1_555 0.000 -0.083 0.082 -2.003 -9.346 2.745 4 A_DA6:DT6_B A 6 ? B 6 ? 20 1 1 A DT 6 1_555 B DA 5 1_555 0.011 -0.066 0.035 6.356 -13.361 3.471 5 A_DT7:DA5_B A 7 ? B 5 ? 20 1 1 A DC 7 1_555 B DG 4 1_555 0.194 -0.171 0.051 -7.112 -12.726 2.708 6 A_DC8:DG4_B A 8 ? B 4 ? 19 1 1 A DT 8 1_555 B DA 3 1_555 0.055 -0.031 0.185 -13.916 -14.187 -0.335 7 A_DT9:DA3_B A 9 ? B 3 ? 20 1 1 A DT 9 1_555 B DA 2 1_555 -0.238 -0.120 0.044 -13.148 -4.304 -2.538 8 A_DT10:DA2_B A 10 ? B 2 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 1 1_555 B DA 10 1_555 A DG 2 1_555 B DC 9 1_555 0.349 -1.082 3.108 2.387 10.967 25.692 -4.549 -0.217 2.469 23.297 -5.072 27.999 1 AA_DT2DG3:DC9DA10_BB A 2 ? B 10 ? A 3 ? B 9 ? 1 A DG 2 1_555 B DC 9 1_555 A DT 3 1_555 B DA 8 1_555 -0.454 -0.553 2.810 3.032 4.616 27.771 -2.027 1.516 2.622 9.498 -6.239 28.305 2 AA_DG3DT4:DA8DC9_BB A 3 ? B 9 ? A 4 ? B 8 ? 1 A DA 5 1_555 B DT 6 1_555 A DT 6 1_555 B DA 5 1_555 -0.027 -0.735 3.086 0.689 -1.907 31.527 -1.015 0.171 3.123 -3.504 -1.266 31.590 3 AA_DA6DT7:DA5DT6_BB A 6 ? B 6 ? A 7 ? B 5 ? 1 A DT 6 1_555 B DA 5 1_555 A DC 7 1_555 B DG 4 1_555 0.131 -0.396 3.434 1.975 2.688 39.551 -0.911 0.048 3.403 3.964 -2.912 39.685 4 AA_DT7DC8:DG4DA5_BB A 7 ? B 5 ? A 8 ? B 4 ? 1 A DC 7 1_555 B DG 4 1_555 A DT 8 1_555 B DA 3 1_555 -0.597 -0.440 3.492 -0.203 3.915 32.375 -1.506 1.026 3.420 6.989 0.363 32.605 5 AA_DC8DT9:DA3DG4_BB A 8 ? B 4 ? A 9 ? B 3 ? 1 A DT 8 1_555 B DA 3 1_555 A DT 9 1_555 B DA 2 1_555 0.573 0.131 3.266 1.018 -0.574 37.625 0.277 -0.756 3.277 -0.890 -1.578 37.642 6 AA_DT9DT10:DA2DA3_BB A 9 ? B 3 ? A 10 ? B 2 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Natural Science Foundation of China (NSFC)' China 21877065 1 'National Natural Science Foundation of China (NSFC)' China 82111530210 2 'Ministry of Science and Technology (MoST, China)' China 2023YFA0913800 3 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2SSP _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9LNP _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.020437 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015316 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010047 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CA H N O P S # loop_ # loop_ #