HEADER HYDROLASE 06-FEB-25 9LTK TITLE CRYSTAL STRUCTUR OF LPG1618(R215F) FROM LEGIONELLA PNEUMOPHILA COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA SUBSP. PNEUMOPHILA SOURCE 3 (STRAIN PHILADELPHIA 1 / ATCC 33152 / DSM 7513); SOURCE 4 ORGANISM_TAXID: 446; SOURCE 5 GENE: LPG1618; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-LACTAMASE, OXA-29, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.LIU,J.GAO,H.GE REVDAT 1 25-JUN-25 9LTK 0 JRNL AUTH J.GAO,T.LIU,L.LU,Z.ZHOU,W.SUN,Y.CHEN,W.XU,N.WANG,J.MA,H.GE JRNL TITL STRUCTURAL AND MOLECULAR CHARACTERIZATION OF AMPS, A CLASS D JRNL TITL 2 BETA-LACTAMASE FROM LEGIONELLA PNEUMOPHILA. JRNL REF INT.J.BIOL.MACROMOL. V. 312 44174 2025 JRNL REFN ISSN 0141-8130 JRNL PMID 40379166 JRNL DOI 10.1016/J.IJBIOMAC.2025.144174 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0415 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 48972 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2502 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3561 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2650 REMARK 3 BIN FREE R VALUE SET COUNT : 169 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3970 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 102 REMARK 3 SOLVENT ATOMS : 538 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.128 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.111 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4186 ; 0.011 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3854 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5672 ; 1.489 ; 1.654 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8889 ; 0.753 ; 1.590 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 492 ; 5.545 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 16 ; 0.870 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 731 ;14.489 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 596 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4845 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1003 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1947 ; 3.182 ; 2.219 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1947 ; 3.182 ; 2.219 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2431 ; 4.062 ; 3.950 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2432 ; 4.063 ; 3.950 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2239 ; 4.524 ; 2.793 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2240 ; 4.523 ; 2.794 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3237 ; 6.583 ; 4.898 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4998 ; 8.972 ;25.350 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4999 ; 8.972 ;25.350 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9LTK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 12-FEB-25. REMARK 100 THE DEPOSITION ID IS D_1300056429. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPX REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51671 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 72.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL PH7.2, 2.5M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 14555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 15555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 16555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 17555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 18555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 19555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 20555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 21555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 22555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 23555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 24555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 78.09450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.09450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 78.09450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.09450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 78.09450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 78.09450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 78.09450 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 78.09450 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 78.09450 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 78.09450 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 78.09450 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 78.09450 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 78.09450 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 78.09450 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 78.09450 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 78.09450 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 78.09450 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 78.09450 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 39.04725 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 117.14175 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 117.14175 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 39.04725 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 39.04725 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 39.04725 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 117.14175 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 117.14175 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 39.04725 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 117.14175 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 39.04725 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 117.14175 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 39.04725 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 117.14175 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 117.14175 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 117.14175 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 39.04725 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 117.14175 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 39.04725 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 39.04725 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 39.04725 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 117.14175 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 117.14175 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 39.04725 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 39.04725 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 117.14175 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 117.14175 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 117.14175 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 117.14175 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 39.04725 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 117.14175 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 39.04725 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 117.14175 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 39.04725 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 39.04725 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 39.04725 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 693 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 538 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 562 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 28 REMARK 465 HIS A 29 REMARK 465 HIS A 30 REMARK 465 HIS A 31 REMARK 465 HIS A 32 REMARK 465 HIS A 33 REMARK 465 HIS A 34 REMARK 465 GLN A 35 REMARK 465 MET B 28 REMARK 465 HIS B 29 REMARK 465 HIS B 30 REMARK 465 HIS B 31 REMARK 465 HIS B 32 REMARK 465 HIS B 33 REMARK 465 HIS B 34 REMARK 465 THR B 218 REMARK 465 LYS B 219 REMARK 465 ASP B 220 REMARK 465 LYS B 221 REMARK 465 SER B 222 REMARK 465 GLN B 223 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 92 CG CD OE1 OE2 REMARK 470 LEU B 217 CG CD1 CD2 REMARK 470 LYS B 224 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 44 -116.81 56.92 REMARK 500 ALA A 62 -139.70 49.22 REMARK 500 SER A 161 -139.44 -144.18 REMARK 500 PRO A 226 26.61 -76.27 REMARK 500 ASP A 239 -120.33 51.72 REMARK 500 ASN B 44 -118.84 58.70 REMARK 500 ALA B 62 -140.65 47.47 REMARK 500 SER B 161 -138.04 -141.22 REMARK 500 ASP B 239 -119.74 52.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 693 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH B 643 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH B 644 DISTANCE = 6.35 ANGSTROMS REMARK 525 HOH B 645 DISTANCE = 6.45 ANGSTROMS DBREF 9LTK A 35 280 UNP Q5ZV24 Q5ZV24_LEGPH 35 280 DBREF 9LTK B 35 280 UNP Q5ZV24 Q5ZV24_LEGPH 35 280 SEQADV 9LTK MET A 28 UNP Q5ZV24 INITIATING METHIONINE SEQADV 9LTK HIS A 29 UNP Q5ZV24 EXPRESSION TAG SEQADV 9LTK HIS A 30 UNP Q5ZV24 EXPRESSION TAG SEQADV 9LTK HIS A 31 UNP Q5ZV24 EXPRESSION TAG SEQADV 9LTK HIS A 32 UNP Q5ZV24 EXPRESSION TAG SEQADV 9LTK HIS A 33 UNP Q5ZV24 EXPRESSION TAG SEQADV 9LTK HIS A 34 UNP Q5ZV24 EXPRESSION TAG SEQADV 9LTK PHE A 215 UNP Q5ZV24 ARG 215 ENGINEERED MUTATION SEQADV 9LTK MET B 28 UNP Q5ZV24 INITIATING METHIONINE SEQADV 9LTK HIS B 29 UNP Q5ZV24 EXPRESSION TAG SEQADV 9LTK HIS B 30 UNP Q5ZV24 EXPRESSION TAG SEQADV 9LTK HIS B 31 UNP Q5ZV24 EXPRESSION TAG SEQADV 9LTK HIS B 32 UNP Q5ZV24 EXPRESSION TAG SEQADV 9LTK HIS B 33 UNP Q5ZV24 EXPRESSION TAG SEQADV 9LTK HIS B 34 UNP Q5ZV24 EXPRESSION TAG SEQADV 9LTK PHE B 215 UNP Q5ZV24 ARG 215 ENGINEERED MUTATION SEQRES 1 A 253 MET HIS HIS HIS HIS HIS HIS GLN GLY THR CYS PHE LEU SEQRES 2 A 253 ALA LYS GLU ASN GLN THR VAL LEU LYS ARG GLU GLY ASN SEQRES 3 A 253 ASP CYS ASP GLN ARG TYR SER PRO ALA SER THR PHE LYS SEQRES 4 A 253 ILE ALA LEU SER LEU MET GLY PHE ASP SER GLY ILE LEU SEQRES 5 A 253 LYS ASP GLU LEU HIS PRO GLU TRP PRO TYR LYS LYS GLU SEQRES 6 A 253 TYR GLU LEU TYR LEU ASN VAL TRP LYS TYR PRO GLN ASN SEQRES 7 A 253 PRO HIS THR TRP ILE ARG ASP SER CYS VAL TRP TYR SER SEQRES 8 A 253 GLN ALA LEU THR ARG GLN LEU GLY MET LYS ARG PHE LYS SEQRES 9 A 253 GLY TYR VAL ASP ALA PHE HIS TYR GLY ASN GLN ASP VAL SEQRES 10 A 253 SER GLY ASP ARG GLY GLN ASN ASN GLY LEU THR HIS ALA SEQRES 11 A 253 TRP LEU SER SER SER LEU SER ILE SER PRO THR GLU GLN SEQRES 12 A 253 ILE GLN PHE LEU GLN LYS ILE ILE TYR LYS LYS LEU PRO SEQRES 13 A 253 VAL SER GLN LYS ALA TYR ILE MET THR LYS ASN ILE MET SEQRES 14 A 253 TYR ILE GLN GLU LEU PRO GLY GLY TRP LYS LEU TYR GLY SEQRES 15 A 253 LYS THR GLY THR GLY PHE GLN LEU THR LYS ASP LYS SER SEQRES 16 A 253 GLN LYS LEU PRO LEU GLN HIS GLY TRP PHE VAL GLY TRP SEQRES 17 A 253 ILE GLU LYS ASP GLU ARG VAL ILE THR PHE ALA LYS HIS SEQRES 18 A 253 ILE ALA ASP SER LYS GLU ASN ASN THR PHE ALA SER PHE SEQRES 19 A 253 ARG ALA LYS ASN ASP ALA LEU ILE GLN LEU PHE ASN LEU SEQRES 20 A 253 ILE ASN GLU LEU GLU LYS SEQRES 1 B 253 MET HIS HIS HIS HIS HIS HIS GLN GLY THR CYS PHE LEU SEQRES 2 B 253 ALA LYS GLU ASN GLN THR VAL LEU LYS ARG GLU GLY ASN SEQRES 3 B 253 ASP CYS ASP GLN ARG TYR SER PRO ALA SER THR PHE LYS SEQRES 4 B 253 ILE ALA LEU SER LEU MET GLY PHE ASP SER GLY ILE LEU SEQRES 5 B 253 LYS ASP GLU LEU HIS PRO GLU TRP PRO TYR LYS LYS GLU SEQRES 6 B 253 TYR GLU LEU TYR LEU ASN VAL TRP LYS TYR PRO GLN ASN SEQRES 7 B 253 PRO HIS THR TRP ILE ARG ASP SER CYS VAL TRP TYR SER SEQRES 8 B 253 GLN ALA LEU THR ARG GLN LEU GLY MET LYS ARG PHE LYS SEQRES 9 B 253 GLY TYR VAL ASP ALA PHE HIS TYR GLY ASN GLN ASP VAL SEQRES 10 B 253 SER GLY ASP ARG GLY GLN ASN ASN GLY LEU THR HIS ALA SEQRES 11 B 253 TRP LEU SER SER SER LEU SER ILE SER PRO THR GLU GLN SEQRES 12 B 253 ILE GLN PHE LEU GLN LYS ILE ILE TYR LYS LYS LEU PRO SEQRES 13 B 253 VAL SER GLN LYS ALA TYR ILE MET THR LYS ASN ILE MET SEQRES 14 B 253 TYR ILE GLN GLU LEU PRO GLY GLY TRP LYS LEU TYR GLY SEQRES 15 B 253 LYS THR GLY THR GLY PHE GLN LEU THR LYS ASP LYS SER SEQRES 16 B 253 GLN LYS LEU PRO LEU GLN HIS GLY TRP PHE VAL GLY TRP SEQRES 17 B 253 ILE GLU LYS ASP GLU ARG VAL ILE THR PHE ALA LYS HIS SEQRES 18 B 253 ILE ALA ASP SER LYS GLU ASN ASN THR PHE ALA SER PHE SEQRES 19 B 253 ARG ALA LYS ASN ASP ALA LEU ILE GLN LEU PHE ASN LEU SEQRES 20 B 253 ILE ASN GLU LEU GLU LYS HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HET SO4 A 307 5 HET SO4 A 308 5 HET SO4 A 309 5 HET SO4 A 310 5 HET GOL A 311 6 HET SO4 B 301 5 HET SO4 B 302 5 HET SO4 B 303 5 HET SO4 B 304 5 HET SO4 B 305 5 HET SO4 B 306 5 HET SO4 B 307 5 HET SO4 B 308 5 HET GOL B 309 6 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SO4 18(O4 S 2-) FORMUL 13 GOL 2(C3 H8 O3) FORMUL 23 HOH *538(H2 O) HELIX 1 AA1 PRO A 61 THR A 64 5 4 HELIX 2 AA2 PHE A 65 SER A 76 1 12 HELIX 3 AA3 LEU A 97 TYR A 102 5 6 HELIX 4 AA4 ASN A 105 SER A 113 1 9 HELIX 5 AA5 CYS A 114 PHE A 137 1 24 HELIX 6 AA6 ASN A 152 ALA A 157 1 6 HELIX 7 AA7 SER A 166 TYR A 179 1 14 HELIX 8 AA8 SER A 185 MET A 196 1 12 HELIX 9 AA9 PRO A 202 GLY A 204 5 3 HELIX 10 AB1 PHE A 258 GLU A 279 1 22 HELIX 11 AB2 PRO B 61 THR B 64 5 4 HELIX 12 AB3 PHE B 65 SER B 76 1 12 HELIX 13 AB4 LYS B 91 LEU B 95 5 5 HELIX 14 AB5 LEU B 97 TYR B 102 5 6 HELIX 15 AB6 ASN B 105 SER B 113 1 9 HELIX 16 AB7 CYS B 114 GLY B 126 1 13 HELIX 17 AB8 GLY B 126 PHE B 137 1 12 HELIX 18 AB9 ASN B 152 ALA B 157 1 6 HELIX 19 AC1 SER B 166 TYR B 179 1 14 HELIX 20 AC2 SER B 185 MET B 196 1 12 HELIX 21 AC3 PRO B 202 GLY B 204 5 3 HELIX 22 AC4 PHE B 258 GLU B 279 1 22 SHEET 1 AA1 6 THR A 46 GLU A 51 0 SHEET 2 AA1 6 THR A 37 GLU A 43 -1 N PHE A 39 O GLU A 51 SHEET 3 AA1 6 ARG A 241 ALA A 250 -1 O THR A 244 N LYS A 42 SHEET 4 AA1 6 LYS A 224 LYS A 238 -1 N GLY A 234 O PHE A 245 SHEET 5 AA1 6 TRP A 205 LEU A 217 -1 N GLY A 212 O TRP A 231 SHEET 6 AA1 6 TYR A 197 LEU A 201 -1 N GLN A 199 O LEU A 207 SHEET 1 AA2 6 THR B 46 GLU B 51 0 SHEET 2 AA2 6 GLY B 36 GLU B 43 -1 N GLU B 43 O THR B 46 SHEET 3 AA2 6 ARG B 241 ALA B 250 -1 O THR B 244 N LYS B 42 SHEET 4 AA2 6 GLN B 228 LYS B 238 -1 N ILE B 236 O ILE B 243 SHEET 5 AA2 6 TRP B 205 PHE B 215 -1 N LYS B 206 O GLU B 237 SHEET 6 AA2 6 TYR B 197 LEU B 201 -1 N LEU B 201 O TRP B 205 SSBOND 1 CYS A 38 CYS A 55 1555 1555 2.02 SSBOND 2 CYS B 38 CYS B 55 1555 1555 2.03 CISPEP 1 HIS A 84 PRO A 85 0 3.69 CISPEP 2 HIS B 84 PRO B 85 0 3.40 CRYST1 156.189 156.189 156.189 90.00 90.00 90.00 P 43 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006402 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006402 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006402 0.00000 CONECT 17 153 CONECT 153 17 CONECT 2047 2183 CONECT 2183 2047 CONECT 3995 3996 3997 3998 3999 CONECT 3996 3995 CONECT 3997 3995 CONECT 3998 3995 CONECT 3999 3995 CONECT 4000 4001 4002 4003 4004 CONECT 4001 4000 CONECT 4002 4000 CONECT 4003 4000 CONECT 4004 4000 CONECT 4005 4006 4007 4008 4009 CONECT 4006 4005 CONECT 4007 4005 CONECT 4008 4005 CONECT 4009 4005 CONECT 4010 4011 4012 4013 4014 CONECT 4011 4010 CONECT 4012 4010 CONECT 4013 4010 CONECT 4014 4010 CONECT 4015 4016 4017 4018 4019 CONECT 4016 4015 CONECT 4017 4015 CONECT 4018 4015 CONECT 4019 4015 CONECT 4020 4021 4022 4023 4024 CONECT 4021 4020 CONECT 4022 4020 CONECT 4023 4020 CONECT 4024 4020 CONECT 4025 4026 4027 4028 4029 CONECT 4026 4025 CONECT 4027 4025 CONECT 4028 4025 CONECT 4029 4025 CONECT 4030 4031 4032 4033 4034 CONECT 4031 4030 CONECT 4032 4030 CONECT 4033 4030 CONECT 4034 4030 CONECT 4035 4036 4037 4038 4039 CONECT 4036 4035 CONECT 4037 4035 CONECT 4038 4035 CONECT 4039 4035 CONECT 4040 4041 4042 4043 4044 CONECT 4041 4040 CONECT 4042 4040 CONECT 4043 4040 CONECT 4044 4040 CONECT 4045 4046 4047 CONECT 4046 4045 CONECT 4047 4045 4048 4049 CONECT 4048 4047 CONECT 4049 4047 4050 CONECT 4050 4049 CONECT 4051 4052 4053 4054 4055 CONECT 4052 4051 CONECT 4053 4051 CONECT 4054 4051 CONECT 4055 4051 CONECT 4056 4057 4058 4059 4060 CONECT 4057 4056 CONECT 4058 4056 CONECT 4059 4056 CONECT 4060 4056 CONECT 4061 4062 4063 4064 4065 CONECT 4062 4061 CONECT 4063 4061 CONECT 4064 4061 CONECT 4065 4061 CONECT 4066 4067 4068 4069 4070 CONECT 4067 4066 CONECT 4068 4066 CONECT 4069 4066 CONECT 4070 4066 CONECT 4071 4072 4073 4074 4075 CONECT 4072 4071 CONECT 4073 4071 CONECT 4074 4071 CONECT 4075 4071 CONECT 4076 4077 4078 4079 4080 CONECT 4077 4076 CONECT 4078 4076 CONECT 4079 4076 CONECT 4080 4076 CONECT 4081 4082 4083 4084 4085 CONECT 4082 4081 CONECT 4083 4081 CONECT 4084 4081 CONECT 4085 4081 CONECT 4086 4087 4088 4089 4090 CONECT 4087 4086 CONECT 4088 4086 CONECT 4089 4086 CONECT 4090 4086 CONECT 4091 4092 4093 CONECT 4092 4091 CONECT 4093 4091 4094 4095 CONECT 4094 4093 CONECT 4095 4093 4096 CONECT 4096 4095 MASTER 405 0 20 22 12 0 0 6 4610 2 106 40 END