HEADER TRANSFERASE 28-FEB-25 9M2T TITLE CRYSTAL STRUCTURE OF GLYCEROL KINASE FROM ENTAMOEBA HISTOLYTICA TITLE 2 COMPLEXED WITH AMP-PNP AND GLYCEROL. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCEROL KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ATP:GLYCEROL 3-PHOSPHOTRANSFERASE; COMPND 5 EC: 2.7.1.30; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA; SOURCE 3 ORGANISM_TAXID: 5759; SOURCE 4 GENE: CL6EHI_164850; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS GLYCEROL KINASE, ENTAMOEBA HISTOLYTICA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.O.BALOGUN,G.JEELANI,E.HANE,H.KONDO,Y.HASEGAWA,C.KOJIMA,T.CHISHIMA, AUTHOR 2 S.HARADA,J.KISHIKAWA,T.NOZAKI,T.SHIBA REVDAT 1 04-MAR-26 9M2T 0 JRNL AUTH E.O.BALOGUN,G.JEELANI,E.HANE,H.KONDO,Y.HASEGAWA,C.KOJIMA, JRNL AUTH 2 T.CHISHIMA,S.HARADA,J.KISHIKAWA,T.NOZAKI,T.SHIBA JRNL TITL CRYSTAL STRUCTURE OF GLYCEROL KINASE FROM ENTAMOEBA JRNL TITL 2 HISTOLYTICA COMPLEXED WITH AMP-PNP AND GLYCEROL. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 84061 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4329 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.79 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5669 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.59 REMARK 3 BIN R VALUE (WORKING SET) : 0.3130 REMARK 3 BIN FREE R VALUE SET COUNT : 279 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7560 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 132 REMARK 3 SOLVENT ATOMS : 222 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.139 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.133 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.110 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.652 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7838 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 7518 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10598 ; 1.564 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 17349 ; 0.994 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 972 ; 6.433 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 326 ;38.426 ;25.399 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1385 ;15.282 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;18.591 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1200 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8730 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1708 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3891 ; 2.323 ; 3.462 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3890 ; 2.323 ; 3.461 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4862 ; 3.158 ; 5.181 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4863 ; 3.158 ; 5.182 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3947 ; 2.925 ; 3.867 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3947 ; 2.923 ; 3.867 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5737 ; 4.537 ; 5.632 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 8901 ; 6.214 ;27.849 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 8902 ; 6.214 ;27.853 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9M2T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-MAR-25. REMARK 100 THE DEPOSITION ID IS D_1300057060. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAY-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5-7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 88486 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 10.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.82400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % PEG3350, 0.2 M HCOONA, 50 MM REMARK 280 PHOSPHATE BUFFER (PH 6.8), VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.77600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 102.13900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.83750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 102.13900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.77600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.83750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 425 O HOH A 601 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 23 39.97 86.30 REMARK 500 GLU A 82 -44.27 70.10 REMARK 500 LEU A 188 11.30 59.62 REMARK 500 ALA A 305 -88.94 -130.22 REMARK 500 ARG A 451 77.12 -117.93 REMARK 500 VAL A 484 -78.88 -99.76 REMARK 500 GLU B 82 -44.26 64.59 REMARK 500 THR B 83 126.49 -37.99 REMARK 500 ALA B 305 -90.96 -128.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 506 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ANP A 501 O3G REMARK 620 2 ANP A 501 O1B 89.4 REMARK 620 3 HOH A 613 O 98.4 92.3 REMARK 620 4 HOH A 620 O 86.1 84.7 174.5 REMARK 620 5 HOH A 633 O 175.3 87.3 85.1 90.2 REMARK 620 6 HOH A 652 O 85.1 174.5 88.7 94.8 98.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 508 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 P6G A 507 O7 REMARK 620 2 P6G A 507 O10 67.6 REMARK 620 3 P6G A 507 O13 134.0 66.4 REMARK 620 4 P6G A 507 O16 155.4 136.6 70.5 REMARK 620 5 P6G A 507 O19 91.2 158.6 134.8 64.3 REMARK 620 6 HOH A 694 O 86.4 85.4 91.6 91.5 90.5 REMARK 620 7 HOH B 686 O 92.6 91.0 86.6 90.8 93.1 176.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 504 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ANP B 501 O2G REMARK 620 2 ANP B 501 O2B 90.5 REMARK 620 3 HOH B 613 O 91.5 92.0 REMARK 620 4 HOH B 619 O 84.8 90.5 175.5 REMARK 620 5 HOH B 621 O 176.2 91.5 91.7 91.9 REMARK 620 6 HOH B 657 O 83.6 173.8 89.8 87.4 94.3 REMARK 620 N 1 2 3 4 5 DBREF1 9M2T A 1 485 UNP A0A5K1V6Z1_ENTHI DBREF2 9M2T A A0A5K1V6Z1 1 485 DBREF1 9M2T B 1 485 UNP A0A5K1V6Z1_ENTHI DBREF2 9M2T B A0A5K1V6Z1 1 485 SEQADV 9M2T GLY A -1 UNP A0A5K1V6Z EXPRESSION TAG SEQADV 9M2T SER A 0 UNP A0A5K1V6Z EXPRESSION TAG SEQADV 9M2T GLY B -1 UNP A0A5K1V6Z EXPRESSION TAG SEQADV 9M2T SER B 0 UNP A0A5K1V6Z EXPRESSION TAG SEQRES 1 A 487 GLY SER MET LYS TYR ILE LEU ALA ILE ASP GLN GLY THR SEQRES 2 A 487 THR SER THR ARG VAL ILE LEU PHE ASP GLU LYS CYS GLN SEQRES 3 A 487 SER ILE HIS THR GLU GLN GLU GLU PHE ASP SER ILE PHE SEQRES 4 A 487 PRO HIS PRO GLY TRP VAL GLU GLN ASP PRO GLU VAL ILE SEQRES 5 A 487 TYR THR SER VAL VAL ASN LEU MET LYS LYS CYS LEU VAL SEQRES 6 A 487 ASN THR GLY ILE ASN LYS GLU ASP ILE ALA ALA ILE GLY SEQRES 7 A 487 ILE THR ASN GLN ARG GLU THR THR VAL MET TRP ASP LYS SEQRES 8 A 487 ARG THR GLY LYS PRO ILE TYR ASN ALA ILE VAL TRP GLN SEQRES 9 A 487 SER LYS GLN SER GLY ASN GLU THR SER TYR LEU MET GLU SEQRES 10 A 487 LYS GLY TYR GLU GLU ILE PHE GLN SER LYS THR GLY LEU SEQRES 11 A 487 VAL LEU ASN PRO TYR PHE SER ALA SER LYS ILE MET TRP SEQRES 12 A 487 ILE PHE ASN ASN VAL GLU GLY ALA LYS ALA LEU ALA GLU SEQRES 13 A 487 GLU GLY VAL LEU LEU PHE GLY THR ILE ASP THR TRP ILE SEQRES 14 A 487 ILE TYR ASN LEU THR GLY GLY GLN SER HIS SER THR ASP SEQRES 15 A 487 ILE SER ASN ALA ALA ARG THR LEU LEU PHE ASN ILE TYR SEQRES 16 A 487 GLU LYS LYS TRP ASP ASP GLU LEU LEU ALA LYS THR ASN SEQRES 17 A 487 ILE PRO LYS SER ILE LEU PRO ILE VAL LYS GLN SER SER SEQRES 18 A 487 ASP ASP PHE GLY ILE VAL SER THR ILE GLN GLU PHE ASN SEQRES 19 A 487 GLY ILE HIS ILE THR GLY VAL ALA GLY ASP GLN GLN ALA SEQRES 20 A 487 SER LEU PHE GLY HIS GLY SER PRO ILE GLY GLY CYS LYS SEQRES 21 A 487 SER THR TYR GLY THR GLY CYS PHE VAL VAL LYS ASN ILE SEQRES 22 A 487 GLY ASP THR ILE LYS GLU ILE PRO LYS GLY LEU LEU ALA SEQRES 23 A 487 THR VAL GLY TRP GLU ILE ASN GLY LYS ILE THR TYR ALA SEQRES 24 A 487 LEU GLU GLY THR VAL MET THR ALA GLY ALA ALA LEU LYS SEQRES 25 A 487 TRP ILE ARG ASP ILE GLY ILE LEU LYS ASP TYR ASN GLU SEQRES 26 A 487 ILE SER LYS ILE VAL THR SER LYS ASN GLY GLY VAL TYR SEQRES 27 A 487 PHE VAL PRO ALA PHE GLN GLY LEU GLY THR PRO TYR TRP SEQRES 28 A 487 ASP ASP ASP VAL ARG GLY ILE ILE VAL GLY LEU THR SER SEQRES 29 A 487 GLY THR GLY LYS GLY GLU LEU VAL ARG ALA THR LEU GLU SEQRES 30 A 487 SER ILE ALA LEU GLN CYS ALA GLN VAL ILE GLU ILE MET SEQRES 31 A 487 GLY LYS ILE ASN GLU ILE LYS VAL ASP GLY GLY VAL SER SEQRES 32 A 487 ARG SER ASP CYS MET LEU GLN PHE GLN ALA ASP ILE CYS SEQRES 33 A 487 ASN CYS THR VAL ILE ARG LEU LYS GLU LYS GLU ILE THR SEQRES 34 A 487 ALA MET GLY ALA ALA MET LEU ALA GLY LEU TYR VAL HIS SEQRES 35 A 487 LEU PHE LYS GLU ASP GLU LEU ASP SER MET ARG VAL ILE SEQRES 36 A 487 GLU HIS VAL PHE LYS PRO GLN MET SER GLU GLU GLU ARG SEQRES 37 A 487 LYS GLN ILE PHE SER VAL TRP ASN LYS ALA VAL GLU SER SEQRES 38 A 487 ALA ARG SER PHE VAL HIS SEQRES 1 B 487 GLY SER MET LYS TYR ILE LEU ALA ILE ASP GLN GLY THR SEQRES 2 B 487 THR SER THR ARG VAL ILE LEU PHE ASP GLU LYS CYS GLN SEQRES 3 B 487 SER ILE HIS THR GLU GLN GLU GLU PHE ASP SER ILE PHE SEQRES 4 B 487 PRO HIS PRO GLY TRP VAL GLU GLN ASP PRO GLU VAL ILE SEQRES 5 B 487 TYR THR SER VAL VAL ASN LEU MET LYS LYS CYS LEU VAL SEQRES 6 B 487 ASN THR GLY ILE ASN LYS GLU ASP ILE ALA ALA ILE GLY SEQRES 7 B 487 ILE THR ASN GLN ARG GLU THR THR VAL MET TRP ASP LYS SEQRES 8 B 487 ARG THR GLY LYS PRO ILE TYR ASN ALA ILE VAL TRP GLN SEQRES 9 B 487 SER LYS GLN SER GLY ASN GLU THR SER TYR LEU MET GLU SEQRES 10 B 487 LYS GLY TYR GLU GLU ILE PHE GLN SER LYS THR GLY LEU SEQRES 11 B 487 VAL LEU ASN PRO TYR PHE SER ALA SER LYS ILE MET TRP SEQRES 12 B 487 ILE PHE ASN ASN VAL GLU GLY ALA LYS ALA LEU ALA GLU SEQRES 13 B 487 GLU GLY VAL LEU LEU PHE GLY THR ILE ASP THR TRP ILE SEQRES 14 B 487 ILE TYR ASN LEU THR GLY GLY GLN SER HIS SER THR ASP SEQRES 15 B 487 ILE SER ASN ALA ALA ARG THR LEU LEU PHE ASN ILE TYR SEQRES 16 B 487 GLU LYS LYS TRP ASP ASP GLU LEU LEU ALA LYS THR ASN SEQRES 17 B 487 ILE PRO LYS SER ILE LEU PRO ILE VAL LYS GLN SER SER SEQRES 18 B 487 ASP ASP PHE GLY ILE VAL SER THR ILE GLN GLU PHE ASN SEQRES 19 B 487 GLY ILE HIS ILE THR GLY VAL ALA GLY ASP GLN GLN ALA SEQRES 20 B 487 SER LEU PHE GLY HIS GLY SER PRO ILE GLY GLY CYS LYS SEQRES 21 B 487 SER THR TYR GLY THR GLY CYS PHE VAL VAL LYS ASN ILE SEQRES 22 B 487 GLY ASP THR ILE LYS GLU ILE PRO LYS GLY LEU LEU ALA SEQRES 23 B 487 THR VAL GLY TRP GLU ILE ASN GLY LYS ILE THR TYR ALA SEQRES 24 B 487 LEU GLU GLY THR VAL MET THR ALA GLY ALA ALA LEU LYS SEQRES 25 B 487 TRP ILE ARG ASP ILE GLY ILE LEU LYS ASP TYR ASN GLU SEQRES 26 B 487 ILE SER LYS ILE VAL THR SER LYS ASN GLY GLY VAL TYR SEQRES 27 B 487 PHE VAL PRO ALA PHE GLN GLY LEU GLY THR PRO TYR TRP SEQRES 28 B 487 ASP ASP ASP VAL ARG GLY ILE ILE VAL GLY LEU THR SER SEQRES 29 B 487 GLY THR GLY LYS GLY GLU LEU VAL ARG ALA THR LEU GLU SEQRES 30 B 487 SER ILE ALA LEU GLN CYS ALA GLN VAL ILE GLU ILE MET SEQRES 31 B 487 GLY LYS ILE ASN GLU ILE LYS VAL ASP GLY GLY VAL SER SEQRES 32 B 487 ARG SER ASP CYS MET LEU GLN PHE GLN ALA ASP ILE CYS SEQRES 33 B 487 ASN CYS THR VAL ILE ARG LEU LYS GLU LYS GLU ILE THR SEQRES 34 B 487 ALA MET GLY ALA ALA MET LEU ALA GLY LEU TYR VAL HIS SEQRES 35 B 487 LEU PHE LYS GLU ASP GLU LEU ASP SER MET ARG VAL ILE SEQRES 36 B 487 GLU HIS VAL PHE LYS PRO GLN MET SER GLU GLU GLU ARG SEQRES 37 B 487 LYS GLN ILE PHE SER VAL TRP ASN LYS ALA VAL GLU SER SEQRES 38 B 487 ALA ARG SER PHE VAL HIS HET ANP A 501 31 HET GOL A 502 6 HET GOL A 503 6 HET GOL A 504 6 HET CAC A 505 5 HET MG A 506 1 HET P6G A 507 19 HET MG A 508 1 HET PG4 A 509 13 HET ANP B 501 31 HET GOL B 502 6 HET GOL B 503 6 HET MG B 504 1 HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM GOL GLYCEROL HETNAM CAC CACODYLATE ION HETNAM MG MAGNESIUM ION HETNAM P6G HEXAETHYLENE GLYCOL HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN CAC DIMETHYLARSINATE HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 3 ANP 2(C10 H17 N6 O12 P3) FORMUL 4 GOL 5(C3 H8 O3) FORMUL 7 CAC C2 H6 AS O2 1- FORMUL 8 MG 3(MG 2+) FORMUL 9 P6G C12 H26 O7 FORMUL 11 PG4 C8 H18 O5 FORMUL 16 HOH *222(H2 O) HELIX 1 AA1 ASP A 46 GLY A 66 1 21 HELIX 2 AA2 ASN A 68 GLU A 70 5 3 HELIX 3 AA3 SER A 106 LYS A 116 1 11 HELIX 4 AA4 TYR A 118 GLY A 127 1 10 HELIX 5 AA5 PHE A 134 VAL A 146 1 13 HELIX 6 AA6 GLY A 148 GLU A 155 1 8 HELIX 7 AA7 THR A 162 THR A 172 1 11 HELIX 8 AA8 ILE A 181 ALA A 185 1 5 HELIX 9 AA9 ASP A 198 ASN A 206 1 9 HELIX 10 AB1 PRO A 208 LEU A 212 5 5 HELIX 11 AB2 ASP A 242 HIS A 250 1 9 HELIX 12 AB3 ALA A 305 ILE A 315 1 11 HELIX 13 AB4 ASN A 322 VAL A 328 1 7 HELIX 14 AB5 GLY A 365 MET A 388 1 24 HELIX 15 AB6 GLY A 398 ARG A 402 5 5 HELIX 16 AB7 SER A 403 ASN A 415 1 13 HELIX 17 AB8 GLU A 425 VAL A 439 1 15 HELIX 18 AB9 LYS A 443 ARG A 451 5 9 HELIX 19 AC1 SER A 462 PHE A 483 1 22 HELIX 20 AC2 ASP B 46 GLY B 66 1 21 HELIX 21 AC3 ASN B 68 GLU B 70 5 3 HELIX 22 AC4 SER B 106 LYS B 116 1 11 HELIX 23 AC5 TYR B 118 GLY B 127 1 10 HELIX 24 AC6 PHE B 134 VAL B 146 1 13 HELIX 25 AC7 GLY B 148 GLU B 155 1 8 HELIX 26 AC8 ILE B 163 THR B 172 1 10 HELIX 27 AC9 ILE B 181 ALA B 185 1 5 HELIX 28 AD1 ARG B 186 LEU B 188 5 3 HELIX 29 AD2 ASP B 198 ASN B 206 1 9 HELIX 30 AD3 PRO B 208 LEU B 212 5 5 HELIX 31 AD4 ASP B 242 GLY B 251 1 10 HELIX 32 AD5 ALA B 305 ILE B 315 1 11 HELIX 33 AD6 ASP B 320 ASN B 322 5 3 HELIX 34 AD7 GLU B 323 VAL B 328 1 6 HELIX 35 AD8 GLY B 365 GLY B 389 1 25 HELIX 36 AD9 GLY B 398 ARG B 402 5 5 HELIX 37 AE1 SER B 403 ASN B 415 1 13 HELIX 38 AE2 GLU B 425 VAL B 439 1 15 HELIX 39 AE3 LYS B 443 ARG B 451 5 9 HELIX 40 AE4 SER B 462 VAL B 484 1 23 SHEET 1 AA1 6 SER A 25 GLU A 32 0 SHEET 2 AA1 6 SER A 13 ASP A 20 -1 N LEU A 18 O ILE A 26 SHEET 3 AA1 6 TYR A 3 GLN A 9 -1 N ALA A 6 O ILE A 17 SHEET 4 AA1 6 ILE A 72 ASN A 79 1 O THR A 78 N GLN A 9 SHEET 5 AA1 6 HIS A 235 GLY A 241 1 O GLY A 238 N ILE A 77 SHEET 6 AA1 6 SER A 219 ILE A 224 -1 N PHE A 222 O ILE A 236 SHEET 1 AA2 2 GLU A 44 GLN A 45 0 SHEET 2 AA2 2 ALA A 98 ILE A 99 -1 O ALA A 98 N GLN A 45 SHEET 1 AA3 2 VAL A 85 ASP A 88 0 SHEET 2 AA3 2 LEU A 158 GLY A 161 -1 O LEU A 159 N TRP A 87 SHEET 1 AA4 2 SER A 178 ASP A 180 0 SHEET 2 AA4 2 ILE A 214 LYS A 216 1 O LYS A 216 N THR A 179 SHEET 1 AA5 2 PHE A 190 ASN A 191 0 SHEET 2 AA5 2 LYS A 196 TRP A 197 -1 O LYS A 196 N ASN A 191 SHEET 1 AA6 7 LEU A 283 ILE A 290 0 SHEET 2 AA6 7 LYS A 293 VAL A 302 -1 O GLU A 299 N LEU A 283 SHEET 3 AA6 7 CYS A 265 ASN A 270 -1 N CYS A 265 O VAL A 302 SHEET 4 AA6 7 CYS A 257 TYR A 261 -1 N LYS A 258 O VAL A 268 SHEET 5 AA6 7 GLU A 393 ASP A 397 1 O LYS A 395 N CYS A 257 SHEET 6 AA6 7 THR A 417 LEU A 421 1 O ILE A 419 N VAL A 396 SHEET 7 AA6 7 ILE A 453 PHE A 457 -1 O HIS A 455 N ARG A 420 SHEET 1 AA7 4 TYR A 336 VAL A 338 0 SHEET 2 AA7 4 GLY A 355 LEU A 360 -1 O ILE A 356 N VAL A 338 SHEET 3 AA7 4 GLY B 355 LEU B 360 -1 O LEU B 360 N GLY A 355 SHEET 4 AA7 4 TYR B 336 VAL B 338 -1 N VAL B 338 O ILE B 356 SHEET 1 AA8 6 SER B 25 GLU B 32 0 SHEET 2 AA8 6 SER B 13 ASP B 20 -1 N LEU B 18 O ILE B 26 SHEET 3 AA8 6 TYR B 3 GLN B 9 -1 N ALA B 6 O ILE B 17 SHEET 4 AA8 6 ILE B 72 ASN B 79 1 O GLY B 76 N ILE B 7 SHEET 5 AA8 6 HIS B 235 GLY B 241 1 O GLY B 238 N ILE B 77 SHEET 6 AA8 6 SER B 219 ILE B 224 -1 N PHE B 222 O ILE B 236 SHEET 1 AA9 2 GLU B 44 GLN B 45 0 SHEET 2 AA9 2 ALA B 98 ILE B 99 -1 O ALA B 98 N GLN B 45 SHEET 1 AB1 2 THR B 84 ASP B 88 0 SHEET 2 AB1 2 LEU B 158 THR B 162 -1 O LEU B 159 N TRP B 87 SHEET 1 AB2 2 SER B 178 ASP B 180 0 SHEET 2 AB2 2 ILE B 214 LYS B 216 1 O LYS B 216 N THR B 179 SHEET 1 AB3 2 PHE B 190 ASN B 191 0 SHEET 2 AB3 2 LYS B 196 TRP B 197 -1 O LYS B 196 N ASN B 191 SHEET 1 AB4 7 LEU B 283 ILE B 290 0 SHEET 2 AB4 7 LYS B 293 VAL B 302 -1 O GLU B 299 N LEU B 283 SHEET 3 AB4 7 CYS B 265 GLY B 272 -1 N GLY B 272 O TYR B 296 SHEET 4 AB4 7 CYS B 257 TYR B 261 -1 N LYS B 258 O VAL B 268 SHEET 5 AB4 7 GLU B 393 ASP B 397 1 O ASP B 397 N TYR B 261 SHEET 6 AB4 7 THR B 417 LEU B 421 1 O ILE B 419 N ILE B 394 SHEET 7 AB4 7 ILE B 453 PHE B 457 -1 O PHE B 457 N VAL B 418 LINK O3G ANP A 501 MG MG A 506 1555 1555 2.15 LINK O1B ANP A 501 MG MG A 506 1555 1555 2.02 LINK MG MG A 506 O HOH A 613 1555 1555 2.10 LINK MG MG A 506 O HOH A 620 1555 1555 2.22 LINK MG MG A 506 O HOH A 633 1555 1555 2.08 LINK MG MG A 506 O HOH A 652 1555 1555 1.94 LINK O7 P6G A 507 MG MG A 508 1555 1555 2.66 LINK O10 P6G A 507 MG MG A 508 1555 1555 2.54 LINK O13 P6G A 507 MG MG A 508 1555 1555 2.33 LINK O16 P6G A 507 MG MG A 508 1555 1555 2.53 LINK O19 P6G A 507 MG MG A 508 1555 1555 2.46 LINK MG MG A 508 O HOH A 694 1555 1555 2.31 LINK MG MG A 508 O HOH B 686 1555 2454 2.58 LINK O2G ANP B 501 MG MG B 504 1555 1555 2.05 LINK O2B ANP B 501 MG MG B 504 1555 1555 2.09 LINK MG MG B 504 O HOH B 613 1555 1555 2.23 LINK MG MG B 504 O HOH B 619 1555 1555 2.19 LINK MG MG B 504 O HOH B 621 1555 1555 2.13 LINK MG MG B 504 O HOH B 657 1555 1555 2.09 CISPEP 1 THR A 346 PRO A 347 0 -0.08 CISPEP 2 THR B 346 PRO B 347 0 -1.44 CRYST1 57.552 79.675 204.278 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017376 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012551 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004895 0.00000 CONECT 7571 7572 7573 7574 7578 CONECT 7572 7571 CONECT 7573 7571 CONECT 7574 7571 7625 CONECT 7575 7576 7577 7578 7582 CONECT 7576 7575 7625 CONECT 7577 7575 CONECT 7578 7571 7575 CONECT 7579 7580 7581 7582 7583 CONECT 7580 7579 CONECT 7581 7579 CONECT 7582 7575 7579 CONECT 7583 7579 7584 CONECT 7584 7583 7585 CONECT 7585 7584 7586 7587 CONECT 7586 7585 7591 CONECT 7587 7585 7588 7589 CONECT 7588 7587 CONECT 7589 7587 7590 7591 CONECT 7590 7589 CONECT 7591 7586 7589 7592 CONECT 7592 7591 7593 7601 CONECT 7593 7592 7594 CONECT 7594 7593 7595 CONECT 7595 7594 7596 7601 CONECT 7596 7595 7597 7598 CONECT 7597 7596 CONECT 7598 7596 7599 CONECT 7599 7598 7600 CONECT 7600 7599 7601 CONECT 7601 7592 7595 7600 CONECT 7602 7603 7604 CONECT 7603 7602 CONECT 7604 7602 7605 7606 CONECT 7605 7604 CONECT 7606 7604 7607 CONECT 7607 7606 CONECT 7608 7609 7610 CONECT 7609 7608 CONECT 7610 7608 7611 7612 CONECT 7611 7610 CONECT 7612 7610 7613 CONECT 7613 7612 CONECT 7614 7615 7616 CONECT 7615 7614 CONECT 7616 7614 7617 7618 CONECT 7617 7616 CONECT 7618 7616 7619 CONECT 7619 7618 CONECT 7620 7621 7622 7623 7624 CONECT 7621 7620 CONECT 7622 7620 CONECT 7623 7620 CONECT 7624 7620 CONECT 7625 7574 7576 7715 7722 CONECT 7625 7735 7754 CONECT 7626 7627 CONECT 7627 7626 7628 CONECT 7628 7627 7629 CONECT 7629 7628 7630 CONECT 7630 7629 7631 CONECT 7631 7630 7632 CONECT 7632 7631 7633 7645 CONECT 7633 7632 7634 CONECT 7634 7633 7635 CONECT 7635 7634 7636 7645 CONECT 7636 7635 7637 CONECT 7637 7636 7638 CONECT 7638 7637 7639 7645 CONECT 7639 7638 7640 CONECT 7640 7639 7641 CONECT 7641 7640 7642 7645 CONECT 7642 7641 7643 CONECT 7643 7642 7644 CONECT 7644 7643 7645 CONECT 7645 7632 7635 7638 7641 CONECT 7645 7644 7796 CONECT 7646 7647 CONECT 7647 7646 7648 CONECT 7648 7647 7649 CONECT 7649 7648 7650 CONECT 7650 7649 7651 CONECT 7651 7650 7652 CONECT 7652 7651 7653 CONECT 7653 7652 7654 CONECT 7654 7653 7655 CONECT 7655 7654 7656 CONECT 7656 7655 7657 CONECT 7657 7656 7658 CONECT 7658 7657 CONECT 7659 7660 7661 7662 7666 CONECT 7660 7659 CONECT 7661 7659 7702 CONECT 7662 7659 CONECT 7663 7664 7665 7666 7670 CONECT 7664 7663 CONECT 7665 7663 7702 CONECT 7666 7659 7663 CONECT 7667 7668 7669 7670 7671 CONECT 7668 7667 CONECT 7669 7667 CONECT 7670 7663 7667 CONECT 7671 7667 7672 CONECT 7672 7671 7673 CONECT 7673 7672 7674 7675 CONECT 7674 7673 7679 CONECT 7675 7673 7676 7677 CONECT 7676 7675 CONECT 7677 7675 7678 7679 CONECT 7678 7677 CONECT 7679 7674 7677 7680 CONECT 7680 7679 7681 7689 CONECT 7681 7680 7682 CONECT 7682 7681 7683 CONECT 7683 7682 7684 7689 CONECT 7684 7683 7685 7686 CONECT 7685 7684 CONECT 7686 7684 7687 CONECT 7687 7686 7688 CONECT 7688 7687 7689 CONECT 7689 7680 7683 7688 CONECT 7690 7691 7692 CONECT 7691 7690 CONECT 7692 7690 7693 7694 CONECT 7693 7692 CONECT 7694 7692 7695 CONECT 7695 7694 CONECT 7696 7697 7698 CONECT 7697 7696 CONECT 7698 7696 7699 7700 CONECT 7699 7698 CONECT 7700 7698 7701 CONECT 7701 7700 CONECT 7702 7661 7665 7819 7825 CONECT 7702 7827 7863 CONECT 7715 7625 CONECT 7722 7625 CONECT 7735 7625 CONECT 7754 7625 CONECT 7796 7645 CONECT 7819 7702 CONECT 7825 7702 CONECT 7827 7702 CONECT 7863 7702 MASTER 323 0 13 40 46 0 0 6 7914 2 144 76 END