data_9M5Q # _entry.id 9M5Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9M5Q pdb_00009m5q 10.2210/pdb9m5q/pdb WWPDB D_1300057044 ? ? EMDB EMD-63647 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-07-09 ? 2 'Structure model' 1 1 2025-07-23 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9M5Q _pdbx_database_status.recvd_initial_deposition_date 2025-03-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'V-shaped amyloid fiber (40) of Tottori (D7N) mutant' _pdbx_database_related.db_id EMD-63647 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email kazum@nips.ac.jp _pdbx_contact_author.name_first Kazuyoshi _pdbx_contact_author.name_last Murata _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9446-3652 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Burton-Smith, R.N.' 1 ? 'Murata, K.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acs Chem Neurosci' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1948-7193 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 16 _citation.language ? _citation.page_first 2682 _citation.page_last 2690 _citation.title 'Microgravity-Assisted Exploration of the Conformational Space of Amyloid beta Affected by Tottori-Type Familial Mutation D7N.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acschemneuro.5c00217 _citation.pdbx_database_id_PubMed 40554613 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yagi-Utsumi, M.' 1 0000-0001-8144-740X primary 'Yanaka, S.' 2 ? primary 'Burton-Smith, R.N.' 3 ? primary 'Song, C.' 4 ? primary 'Ganser, C.' 5 0000-0002-5558-3026 primary 'Yamazaki, C.' 6 ? primary 'Kasahara, H.' 7 ? primary 'Shimazu, T.' 8 ? primary 'Uchihashi, T.' 9 0000-0002-0263-5312 primary 'Murata, K.' 10 ? primary 'Kato, K.' 11 0000-0001-7187-9612 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Amyloid-beta protein 40' _entity.formula_weight 4334.867 _entity.pdbx_number_of_molecules 21 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name Abeta40,Beta-APP40 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code DAEFRHNSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV _entity_poly.pdbx_seq_one_letter_code_can DAEFRHNSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV _entity_poly.pdbx_strand_id AL,AM,AN,AO,AP,AQ,AR,AS,AT,AU,AV,AW,AX,AY,AZ,Aa,Ab,Ac,Ad,Ae,Af _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ALA n 1 3 GLU n 1 4 PHE n 1 5 ARG n 1 6 HIS n 1 7 ASN n 1 8 SER n 1 9 GLY n 1 10 TYR n 1 11 GLU n 1 12 VAL n 1 13 HIS n 1 14 HIS n 1 15 GLN n 1 16 LYS n 1 17 LEU n 1 18 VAL n 1 19 PHE n 1 20 PHE n 1 21 ALA n 1 22 GLU n 1 23 ASP n 1 24 VAL n 1 25 GLY n 1 26 SER n 1 27 ASN n 1 28 LYS n 1 29 GLY n 1 30 ALA n 1 31 ILE n 1 32 ILE n 1 33 GLY n 1 34 LEU n 1 35 MET n 1 36 VAL n 1 37 GLY n 1 38 GLY n 1 39 VAL n 1 40 VAL n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 40 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 ? ? ? AL . n A 1 2 ALA 2 2 ? ? ? AL . n A 1 3 GLU 3 3 ? ? ? AL . n A 1 4 PHE 4 4 ? ? ? AL . n A 1 5 ARG 5 5 ? ? ? AL . n A 1 6 HIS 6 6 ? ? ? AL . n A 1 7 ASN 7 7 ? ? ? AL . n A 1 8 SER 8 8 ? ? ? AL . n A 1 9 GLY 9 9 ? ? ? AL . n A 1 10 TYR 10 10 ? ? ? AL . n A 1 11 GLU 11 11 ? ? ? AL . n A 1 12 VAL 12 12 ? ? ? AL . n A 1 13 HIS 13 13 13 HIS HIS AL . n A 1 14 HIS 14 14 14 HIS HIS AL . n A 1 15 GLN 15 15 15 GLN GLN AL . n A 1 16 LYS 16 16 16 LYS LYS AL . n A 1 17 LEU 17 17 17 LEU LEU AL . n A 1 18 VAL 18 18 18 VAL VAL AL . n A 1 19 PHE 19 19 19 PHE PHE AL . n A 1 20 PHE 20 20 20 PHE PHE AL . n A 1 21 ALA 21 21 21 ALA ALA AL . n A 1 22 GLU 22 22 22 GLU GLU AL . n A 1 23 ASP 23 23 23 ASP ASP AL . n A 1 24 VAL 24 24 24 VAL VAL AL . n A 1 25 GLY 25 25 25 GLY GLY AL . n A 1 26 SER 26 26 26 SER SER AL . n A 1 27 ASN 27 27 27 ASN ASN AL . n A 1 28 LYS 28 28 28 LYS LYS AL . n A 1 29 GLY 29 29 29 GLY GLY AL . n A 1 30 ALA 30 30 30 ALA ALA AL . n A 1 31 ILE 31 31 31 ILE ILE AL . n A 1 32 ILE 32 32 32 ILE ILE AL . n A 1 33 GLY 33 33 33 GLY GLY AL . n A 1 34 LEU 34 34 34 LEU LEU AL . n A 1 35 MET 35 35 35 MET MET AL . n A 1 36 VAL 36 36 36 VAL VAL AL . n A 1 37 GLY 37 37 37 GLY GLY AL . n A 1 38 GLY 38 38 38 GLY GLY AL . n A 1 39 VAL 39 39 39 VAL VAL AL . n A 1 40 VAL 40 40 ? ? ? AL . n B 1 1 ASP 1 1 ? ? ? AM . n B 1 2 ALA 2 2 ? ? ? AM . n B 1 3 GLU 3 3 ? ? ? AM . n B 1 4 PHE 4 4 ? ? ? AM . n B 1 5 ARG 5 5 ? ? ? AM . n B 1 6 HIS 6 6 ? ? ? AM . n B 1 7 ASN 7 7 ? ? ? AM . n B 1 8 SER 8 8 ? ? ? AM . n B 1 9 GLY 9 9 ? ? ? AM . n B 1 10 TYR 10 10 ? ? ? AM . n B 1 11 GLU 11 11 ? ? ? AM . n B 1 12 VAL 12 12 ? ? ? AM . n B 1 13 HIS 13 13 13 HIS HIS AM . n B 1 14 HIS 14 14 14 HIS HIS AM . n B 1 15 GLN 15 15 15 GLN GLN AM . n B 1 16 LYS 16 16 16 LYS LYS AM . n B 1 17 LEU 17 17 17 LEU LEU AM . n B 1 18 VAL 18 18 18 VAL VAL AM . n B 1 19 PHE 19 19 19 PHE PHE AM . n B 1 20 PHE 20 20 20 PHE PHE AM . n B 1 21 ALA 21 21 21 ALA ALA AM . n B 1 22 GLU 22 22 22 GLU GLU AM . n B 1 23 ASP 23 23 23 ASP ASP AM . n B 1 24 VAL 24 24 24 VAL VAL AM . n B 1 25 GLY 25 25 25 GLY GLY AM . n B 1 26 SER 26 26 26 SER SER AM . n B 1 27 ASN 27 27 27 ASN ASN AM . n B 1 28 LYS 28 28 28 LYS LYS AM . n B 1 29 GLY 29 29 29 GLY GLY AM . n B 1 30 ALA 30 30 30 ALA ALA AM . n B 1 31 ILE 31 31 31 ILE ILE AM . n B 1 32 ILE 32 32 32 ILE ILE AM . n B 1 33 GLY 33 33 33 GLY GLY AM . n B 1 34 LEU 34 34 34 LEU LEU AM . n B 1 35 MET 35 35 35 MET MET AM . n B 1 36 VAL 36 36 36 VAL VAL AM . n B 1 37 GLY 37 37 37 GLY GLY AM . n B 1 38 GLY 38 38 38 GLY GLY AM . n B 1 39 VAL 39 39 39 VAL VAL AM . n B 1 40 VAL 40 40 ? ? ? AM . n C 1 1 ASP 1 1 ? ? ? AN . n C 1 2 ALA 2 2 ? ? ? AN . n C 1 3 GLU 3 3 ? ? ? AN . n C 1 4 PHE 4 4 ? ? ? AN . n C 1 5 ARG 5 5 ? ? ? AN . n C 1 6 HIS 6 6 ? ? ? AN . n C 1 7 ASN 7 7 ? ? ? AN . n C 1 8 SER 8 8 ? ? ? AN . n C 1 9 GLY 9 9 ? ? ? AN . n C 1 10 TYR 10 10 ? ? ? AN . n C 1 11 GLU 11 11 ? ? ? AN . n C 1 12 VAL 12 12 ? ? ? AN . n C 1 13 HIS 13 13 13 HIS HIS AN . n C 1 14 HIS 14 14 14 HIS HIS AN . n C 1 15 GLN 15 15 15 GLN GLN AN . n C 1 16 LYS 16 16 16 LYS LYS AN . n C 1 17 LEU 17 17 17 LEU LEU AN . n C 1 18 VAL 18 18 18 VAL VAL AN . n C 1 19 PHE 19 19 19 PHE PHE AN . n C 1 20 PHE 20 20 20 PHE PHE AN . n C 1 21 ALA 21 21 21 ALA ALA AN . n C 1 22 GLU 22 22 22 GLU GLU AN . n C 1 23 ASP 23 23 23 ASP ASP AN . n C 1 24 VAL 24 24 24 VAL VAL AN . n C 1 25 GLY 25 25 25 GLY GLY AN . n C 1 26 SER 26 26 26 SER SER AN . n C 1 27 ASN 27 27 27 ASN ASN AN . n C 1 28 LYS 28 28 28 LYS LYS AN . n C 1 29 GLY 29 29 29 GLY GLY AN . n C 1 30 ALA 30 30 30 ALA ALA AN . n C 1 31 ILE 31 31 31 ILE ILE AN . n C 1 32 ILE 32 32 32 ILE ILE AN . n C 1 33 GLY 33 33 33 GLY GLY AN . n C 1 34 LEU 34 34 34 LEU LEU AN . n C 1 35 MET 35 35 35 MET MET AN . n C 1 36 VAL 36 36 36 VAL VAL AN . n C 1 37 GLY 37 37 37 GLY GLY AN . n C 1 38 GLY 38 38 38 GLY GLY AN . n C 1 39 VAL 39 39 39 VAL VAL AN . n C 1 40 VAL 40 40 ? ? ? AN . n D 1 1 ASP 1 1 ? ? ? AO . n D 1 2 ALA 2 2 ? ? ? AO . n D 1 3 GLU 3 3 ? ? ? AO . n D 1 4 PHE 4 4 ? ? ? AO . n D 1 5 ARG 5 5 ? ? ? AO . n D 1 6 HIS 6 6 ? ? ? AO . n D 1 7 ASN 7 7 ? ? ? AO . n D 1 8 SER 8 8 ? ? ? AO . n D 1 9 GLY 9 9 ? ? ? AO . n D 1 10 TYR 10 10 ? ? ? AO . n D 1 11 GLU 11 11 ? ? ? AO . n D 1 12 VAL 12 12 ? ? ? AO . n D 1 13 HIS 13 13 13 HIS HIS AO . n D 1 14 HIS 14 14 14 HIS HIS AO . n D 1 15 GLN 15 15 15 GLN GLN AO . n D 1 16 LYS 16 16 16 LYS LYS AO . n D 1 17 LEU 17 17 17 LEU LEU AO . n D 1 18 VAL 18 18 18 VAL VAL AO . n D 1 19 PHE 19 19 19 PHE PHE AO . n D 1 20 PHE 20 20 20 PHE PHE AO . n D 1 21 ALA 21 21 21 ALA ALA AO . n D 1 22 GLU 22 22 22 GLU GLU AO . n D 1 23 ASP 23 23 23 ASP ASP AO . n D 1 24 VAL 24 24 24 VAL VAL AO . n D 1 25 GLY 25 25 25 GLY GLY AO . n D 1 26 SER 26 26 26 SER SER AO . n D 1 27 ASN 27 27 27 ASN ASN AO . n D 1 28 LYS 28 28 28 LYS LYS AO . n D 1 29 GLY 29 29 29 GLY GLY AO . n D 1 30 ALA 30 30 30 ALA ALA AO . n D 1 31 ILE 31 31 31 ILE ILE AO . n D 1 32 ILE 32 32 32 ILE ILE AO . n D 1 33 GLY 33 33 33 GLY GLY AO . n D 1 34 LEU 34 34 34 LEU LEU AO . n D 1 35 MET 35 35 35 MET MET AO . n D 1 36 VAL 36 36 36 VAL VAL AO . n D 1 37 GLY 37 37 37 GLY GLY AO . n D 1 38 GLY 38 38 38 GLY GLY AO . n D 1 39 VAL 39 39 39 VAL VAL AO . n D 1 40 VAL 40 40 ? ? ? AO . n E 1 1 ASP 1 1 ? ? ? AP . n E 1 2 ALA 2 2 ? ? ? AP . n E 1 3 GLU 3 3 ? ? ? AP . n E 1 4 PHE 4 4 ? ? ? AP . n E 1 5 ARG 5 5 ? ? ? AP . n E 1 6 HIS 6 6 ? ? ? AP . n E 1 7 ASN 7 7 ? ? ? AP . n E 1 8 SER 8 8 ? ? ? AP . n E 1 9 GLY 9 9 ? ? ? AP . n E 1 10 TYR 10 10 ? ? ? AP . n E 1 11 GLU 11 11 ? ? ? AP . n E 1 12 VAL 12 12 ? ? ? AP . n E 1 13 HIS 13 13 13 HIS HIS AP . n E 1 14 HIS 14 14 14 HIS HIS AP . n E 1 15 GLN 15 15 15 GLN GLN AP . n E 1 16 LYS 16 16 16 LYS LYS AP . n E 1 17 LEU 17 17 17 LEU LEU AP . n E 1 18 VAL 18 18 18 VAL VAL AP . n E 1 19 PHE 19 19 19 PHE PHE AP . n E 1 20 PHE 20 20 20 PHE PHE AP . n E 1 21 ALA 21 21 21 ALA ALA AP . n E 1 22 GLU 22 22 22 GLU GLU AP . n E 1 23 ASP 23 23 23 ASP ASP AP . n E 1 24 VAL 24 24 24 VAL VAL AP . n E 1 25 GLY 25 25 25 GLY GLY AP . n E 1 26 SER 26 26 26 SER SER AP . n E 1 27 ASN 27 27 27 ASN ASN AP . n E 1 28 LYS 28 28 28 LYS LYS AP . n E 1 29 GLY 29 29 29 GLY GLY AP . n E 1 30 ALA 30 30 30 ALA ALA AP . n E 1 31 ILE 31 31 31 ILE ILE AP . n E 1 32 ILE 32 32 32 ILE ILE AP . n E 1 33 GLY 33 33 33 GLY GLY AP . n E 1 34 LEU 34 34 34 LEU LEU AP . n E 1 35 MET 35 35 35 MET MET AP . n E 1 36 VAL 36 36 36 VAL VAL AP . n E 1 37 GLY 37 37 37 GLY GLY AP . n E 1 38 GLY 38 38 38 GLY GLY AP . n E 1 39 VAL 39 39 39 VAL VAL AP . n E 1 40 VAL 40 40 ? ? ? AP . n F 1 1 ASP 1 1 ? ? ? AQ . n F 1 2 ALA 2 2 ? ? ? AQ . n F 1 3 GLU 3 3 ? ? ? AQ . n F 1 4 PHE 4 4 ? ? ? AQ . n F 1 5 ARG 5 5 ? ? ? AQ . n F 1 6 HIS 6 6 ? ? ? AQ . n F 1 7 ASN 7 7 ? ? ? AQ . n F 1 8 SER 8 8 ? ? ? AQ . n F 1 9 GLY 9 9 ? ? ? AQ . n F 1 10 TYR 10 10 ? ? ? AQ . n F 1 11 GLU 11 11 ? ? ? AQ . n F 1 12 VAL 12 12 ? ? ? AQ . n F 1 13 HIS 13 13 13 HIS HIS AQ . n F 1 14 HIS 14 14 14 HIS HIS AQ . n F 1 15 GLN 15 15 15 GLN GLN AQ . n F 1 16 LYS 16 16 16 LYS LYS AQ . n F 1 17 LEU 17 17 17 LEU LEU AQ . n F 1 18 VAL 18 18 18 VAL VAL AQ . n F 1 19 PHE 19 19 19 PHE PHE AQ . n F 1 20 PHE 20 20 20 PHE PHE AQ . n F 1 21 ALA 21 21 21 ALA ALA AQ . n F 1 22 GLU 22 22 22 GLU GLU AQ . n F 1 23 ASP 23 23 23 ASP ASP AQ . n F 1 24 VAL 24 24 24 VAL VAL AQ . n F 1 25 GLY 25 25 25 GLY GLY AQ . n F 1 26 SER 26 26 26 SER SER AQ . n F 1 27 ASN 27 27 27 ASN ASN AQ . n F 1 28 LYS 28 28 28 LYS LYS AQ . n F 1 29 GLY 29 29 29 GLY GLY AQ . n F 1 30 ALA 30 30 30 ALA ALA AQ . n F 1 31 ILE 31 31 31 ILE ILE AQ . n F 1 32 ILE 32 32 32 ILE ILE AQ . n F 1 33 GLY 33 33 33 GLY GLY AQ . n F 1 34 LEU 34 34 34 LEU LEU AQ . n F 1 35 MET 35 35 35 MET MET AQ . n F 1 36 VAL 36 36 36 VAL VAL AQ . n F 1 37 GLY 37 37 37 GLY GLY AQ . n F 1 38 GLY 38 38 38 GLY GLY AQ . n F 1 39 VAL 39 39 39 VAL VAL AQ . n F 1 40 VAL 40 40 ? ? ? AQ . n G 1 1 ASP 1 1 ? ? ? AR . n G 1 2 ALA 2 2 ? ? ? AR . n G 1 3 GLU 3 3 ? ? ? AR . n G 1 4 PHE 4 4 ? ? ? AR . n G 1 5 ARG 5 5 ? ? ? AR . n G 1 6 HIS 6 6 ? ? ? AR . n G 1 7 ASN 7 7 ? ? ? AR . n G 1 8 SER 8 8 ? ? ? AR . n G 1 9 GLY 9 9 ? ? ? AR . n G 1 10 TYR 10 10 ? ? ? AR . n G 1 11 GLU 11 11 ? ? ? AR . n G 1 12 VAL 12 12 ? ? ? AR . n G 1 13 HIS 13 13 13 HIS HIS AR . n G 1 14 HIS 14 14 14 HIS HIS AR . n G 1 15 GLN 15 15 15 GLN GLN AR . n G 1 16 LYS 16 16 16 LYS LYS AR . n G 1 17 LEU 17 17 17 LEU LEU AR . n G 1 18 VAL 18 18 18 VAL VAL AR . n G 1 19 PHE 19 19 19 PHE PHE AR . n G 1 20 PHE 20 20 20 PHE PHE AR . n G 1 21 ALA 21 21 21 ALA ALA AR . n G 1 22 GLU 22 22 22 GLU GLU AR . n G 1 23 ASP 23 23 23 ASP ASP AR . n G 1 24 VAL 24 24 24 VAL VAL AR . n G 1 25 GLY 25 25 25 GLY GLY AR . n G 1 26 SER 26 26 26 SER SER AR . n G 1 27 ASN 27 27 27 ASN ASN AR . n G 1 28 LYS 28 28 28 LYS LYS AR . n G 1 29 GLY 29 29 29 GLY GLY AR . n G 1 30 ALA 30 30 30 ALA ALA AR . n G 1 31 ILE 31 31 31 ILE ILE AR . n G 1 32 ILE 32 32 32 ILE ILE AR . n G 1 33 GLY 33 33 33 GLY GLY AR . n G 1 34 LEU 34 34 34 LEU LEU AR . n G 1 35 MET 35 35 35 MET MET AR . n G 1 36 VAL 36 36 36 VAL VAL AR . n G 1 37 GLY 37 37 37 GLY GLY AR . n G 1 38 GLY 38 38 38 GLY GLY AR . n G 1 39 VAL 39 39 39 VAL VAL AR . n G 1 40 VAL 40 40 ? ? ? AR . n H 1 1 ASP 1 1 ? ? ? AS . n H 1 2 ALA 2 2 ? ? ? AS . n H 1 3 GLU 3 3 ? ? ? AS . n H 1 4 PHE 4 4 ? ? ? AS . n H 1 5 ARG 5 5 ? ? ? AS . n H 1 6 HIS 6 6 ? ? ? AS . n H 1 7 ASN 7 7 ? ? ? AS . n H 1 8 SER 8 8 ? ? ? AS . n H 1 9 GLY 9 9 ? ? ? AS . n H 1 10 TYR 10 10 ? ? ? AS . n H 1 11 GLU 11 11 ? ? ? AS . n H 1 12 VAL 12 12 ? ? ? AS . n H 1 13 HIS 13 13 13 HIS HIS AS . n H 1 14 HIS 14 14 14 HIS HIS AS . n H 1 15 GLN 15 15 15 GLN GLN AS . n H 1 16 LYS 16 16 16 LYS LYS AS . n H 1 17 LEU 17 17 17 LEU LEU AS . n H 1 18 VAL 18 18 18 VAL VAL AS . n H 1 19 PHE 19 19 19 PHE PHE AS . n H 1 20 PHE 20 20 20 PHE PHE AS . n H 1 21 ALA 21 21 21 ALA ALA AS . n H 1 22 GLU 22 22 22 GLU GLU AS . n H 1 23 ASP 23 23 23 ASP ASP AS . n H 1 24 VAL 24 24 24 VAL VAL AS . n H 1 25 GLY 25 25 25 GLY GLY AS . n H 1 26 SER 26 26 26 SER SER AS . n H 1 27 ASN 27 27 27 ASN ASN AS . n H 1 28 LYS 28 28 28 LYS LYS AS . n H 1 29 GLY 29 29 29 GLY GLY AS . n H 1 30 ALA 30 30 30 ALA ALA AS . n H 1 31 ILE 31 31 31 ILE ILE AS . n H 1 32 ILE 32 32 32 ILE ILE AS . n H 1 33 GLY 33 33 33 GLY GLY AS . n H 1 34 LEU 34 34 34 LEU LEU AS . n H 1 35 MET 35 35 35 MET MET AS . n H 1 36 VAL 36 36 36 VAL VAL AS . n H 1 37 GLY 37 37 37 GLY GLY AS . n H 1 38 GLY 38 38 38 GLY GLY AS . n H 1 39 VAL 39 39 39 VAL VAL AS . n H 1 40 VAL 40 40 ? ? ? AS . n I 1 1 ASP 1 1 ? ? ? AT . n I 1 2 ALA 2 2 ? ? ? AT . n I 1 3 GLU 3 3 ? ? ? AT . n I 1 4 PHE 4 4 ? ? ? AT . n I 1 5 ARG 5 5 ? ? ? AT . n I 1 6 HIS 6 6 ? ? ? AT . n I 1 7 ASN 7 7 ? ? ? AT . n I 1 8 SER 8 8 ? ? ? AT . n I 1 9 GLY 9 9 ? ? ? AT . n I 1 10 TYR 10 10 ? ? ? AT . n I 1 11 GLU 11 11 ? ? ? AT . n I 1 12 VAL 12 12 ? ? ? AT . n I 1 13 HIS 13 13 13 HIS HIS AT . n I 1 14 HIS 14 14 14 HIS HIS AT . n I 1 15 GLN 15 15 15 GLN GLN AT . n I 1 16 LYS 16 16 16 LYS LYS AT . n I 1 17 LEU 17 17 17 LEU LEU AT . n I 1 18 VAL 18 18 18 VAL VAL AT . n I 1 19 PHE 19 19 19 PHE PHE AT . n I 1 20 PHE 20 20 20 PHE PHE AT . n I 1 21 ALA 21 21 21 ALA ALA AT . n I 1 22 GLU 22 22 22 GLU GLU AT . n I 1 23 ASP 23 23 23 ASP ASP AT . n I 1 24 VAL 24 24 24 VAL VAL AT . n I 1 25 GLY 25 25 25 GLY GLY AT . n I 1 26 SER 26 26 26 SER SER AT . n I 1 27 ASN 27 27 27 ASN ASN AT . n I 1 28 LYS 28 28 28 LYS LYS AT . n I 1 29 GLY 29 29 29 GLY GLY AT . n I 1 30 ALA 30 30 30 ALA ALA AT . n I 1 31 ILE 31 31 31 ILE ILE AT . n I 1 32 ILE 32 32 32 ILE ILE AT . n I 1 33 GLY 33 33 33 GLY GLY AT . n I 1 34 LEU 34 34 34 LEU LEU AT . n I 1 35 MET 35 35 35 MET MET AT . n I 1 36 VAL 36 36 36 VAL VAL AT . n I 1 37 GLY 37 37 37 GLY GLY AT . n I 1 38 GLY 38 38 38 GLY GLY AT . n I 1 39 VAL 39 39 39 VAL VAL AT . n I 1 40 VAL 40 40 ? ? ? AT . n J 1 1 ASP 1 1 ? ? ? AU . n J 1 2 ALA 2 2 ? ? ? AU . n J 1 3 GLU 3 3 ? ? ? AU . n J 1 4 PHE 4 4 ? ? ? AU . n J 1 5 ARG 5 5 ? ? ? AU . n J 1 6 HIS 6 6 ? ? ? AU . n J 1 7 ASN 7 7 ? ? ? AU . n J 1 8 SER 8 8 ? ? ? AU . n J 1 9 GLY 9 9 ? ? ? AU . n J 1 10 TYR 10 10 ? ? ? AU . n J 1 11 GLU 11 11 ? ? ? AU . n J 1 12 VAL 12 12 ? ? ? AU . n J 1 13 HIS 13 13 13 HIS HIS AU . n J 1 14 HIS 14 14 14 HIS HIS AU . n J 1 15 GLN 15 15 15 GLN GLN AU . n J 1 16 LYS 16 16 16 LYS LYS AU . n J 1 17 LEU 17 17 17 LEU LEU AU . n J 1 18 VAL 18 18 18 VAL VAL AU . n J 1 19 PHE 19 19 19 PHE PHE AU . n J 1 20 PHE 20 20 20 PHE PHE AU . n J 1 21 ALA 21 21 21 ALA ALA AU . n J 1 22 GLU 22 22 22 GLU GLU AU . n J 1 23 ASP 23 23 23 ASP ASP AU . n J 1 24 VAL 24 24 24 VAL VAL AU . n J 1 25 GLY 25 25 25 GLY GLY AU . n J 1 26 SER 26 26 26 SER SER AU . n J 1 27 ASN 27 27 27 ASN ASN AU . n J 1 28 LYS 28 28 28 LYS LYS AU . n J 1 29 GLY 29 29 29 GLY GLY AU . n J 1 30 ALA 30 30 30 ALA ALA AU . n J 1 31 ILE 31 31 31 ILE ILE AU . n J 1 32 ILE 32 32 32 ILE ILE AU . n J 1 33 GLY 33 33 33 GLY GLY AU . n J 1 34 LEU 34 34 34 LEU LEU AU . n J 1 35 MET 35 35 35 MET MET AU . n J 1 36 VAL 36 36 36 VAL VAL AU . n J 1 37 GLY 37 37 37 GLY GLY AU . n J 1 38 GLY 38 38 38 GLY GLY AU . n J 1 39 VAL 39 39 39 VAL VAL AU . n J 1 40 VAL 40 40 ? ? ? AU . n K 1 1 ASP 1 1 ? ? ? AV . n K 1 2 ALA 2 2 ? ? ? AV . n K 1 3 GLU 3 3 ? ? ? AV . n K 1 4 PHE 4 4 ? ? ? AV . n K 1 5 ARG 5 5 ? ? ? AV . n K 1 6 HIS 6 6 ? ? ? AV . n K 1 7 ASN 7 7 ? ? ? AV . n K 1 8 SER 8 8 ? ? ? AV . n K 1 9 GLY 9 9 ? ? ? AV . n K 1 10 TYR 10 10 ? ? ? AV . n K 1 11 GLU 11 11 ? ? ? AV . n K 1 12 VAL 12 12 ? ? ? AV . n K 1 13 HIS 13 13 13 HIS HIS AV . n K 1 14 HIS 14 14 14 HIS HIS AV . n K 1 15 GLN 15 15 15 GLN GLN AV . n K 1 16 LYS 16 16 16 LYS LYS AV . n K 1 17 LEU 17 17 17 LEU LEU AV . n K 1 18 VAL 18 18 18 VAL VAL AV . n K 1 19 PHE 19 19 19 PHE PHE AV . n K 1 20 PHE 20 20 20 PHE PHE AV . n K 1 21 ALA 21 21 21 ALA ALA AV . n K 1 22 GLU 22 22 22 GLU GLU AV . n K 1 23 ASP 23 23 23 ASP ASP AV . n K 1 24 VAL 24 24 24 VAL VAL AV . n K 1 25 GLY 25 25 25 GLY GLY AV . n K 1 26 SER 26 26 26 SER SER AV . n K 1 27 ASN 27 27 27 ASN ASN AV . n K 1 28 LYS 28 28 28 LYS LYS AV . n K 1 29 GLY 29 29 29 GLY GLY AV . n K 1 30 ALA 30 30 30 ALA ALA AV . n K 1 31 ILE 31 31 31 ILE ILE AV . n K 1 32 ILE 32 32 32 ILE ILE AV . n K 1 33 GLY 33 33 33 GLY GLY AV . n K 1 34 LEU 34 34 34 LEU LEU AV . n K 1 35 MET 35 35 35 MET MET AV . n K 1 36 VAL 36 36 36 VAL VAL AV . n K 1 37 GLY 37 37 37 GLY GLY AV . n K 1 38 GLY 38 38 38 GLY GLY AV . n K 1 39 VAL 39 39 39 VAL VAL AV . n K 1 40 VAL 40 40 ? ? ? AV . n L 1 1 ASP 1 1 ? ? ? AW . n L 1 2 ALA 2 2 ? ? ? AW . n L 1 3 GLU 3 3 ? ? ? AW . n L 1 4 PHE 4 4 ? ? ? AW . n L 1 5 ARG 5 5 ? ? ? AW . n L 1 6 HIS 6 6 ? ? ? AW . n L 1 7 ASN 7 7 ? ? ? AW . n L 1 8 SER 8 8 ? ? ? AW . n L 1 9 GLY 9 9 ? ? ? AW . n L 1 10 TYR 10 10 ? ? ? AW . n L 1 11 GLU 11 11 ? ? ? AW . n L 1 12 VAL 12 12 ? ? ? AW . n L 1 13 HIS 13 13 13 HIS HIS AW . n L 1 14 HIS 14 14 14 HIS HIS AW . n L 1 15 GLN 15 15 15 GLN GLN AW . n L 1 16 LYS 16 16 16 LYS LYS AW . n L 1 17 LEU 17 17 17 LEU LEU AW . n L 1 18 VAL 18 18 18 VAL VAL AW . n L 1 19 PHE 19 19 19 PHE PHE AW . n L 1 20 PHE 20 20 20 PHE PHE AW . n L 1 21 ALA 21 21 21 ALA ALA AW . n L 1 22 GLU 22 22 22 GLU GLU AW . n L 1 23 ASP 23 23 23 ASP ASP AW . n L 1 24 VAL 24 24 24 VAL VAL AW . n L 1 25 GLY 25 25 25 GLY GLY AW . n L 1 26 SER 26 26 26 SER SER AW . n L 1 27 ASN 27 27 27 ASN ASN AW . n L 1 28 LYS 28 28 28 LYS LYS AW . n L 1 29 GLY 29 29 29 GLY GLY AW . n L 1 30 ALA 30 30 30 ALA ALA AW . n L 1 31 ILE 31 31 31 ILE ILE AW . n L 1 32 ILE 32 32 32 ILE ILE AW . n L 1 33 GLY 33 33 33 GLY GLY AW . n L 1 34 LEU 34 34 34 LEU LEU AW . n L 1 35 MET 35 35 35 MET MET AW . n L 1 36 VAL 36 36 36 VAL VAL AW . n L 1 37 GLY 37 37 37 GLY GLY AW . n L 1 38 GLY 38 38 38 GLY GLY AW . n L 1 39 VAL 39 39 39 VAL VAL AW . n L 1 40 VAL 40 40 ? ? ? AW . n M 1 1 ASP 1 1 ? ? ? AX . n M 1 2 ALA 2 2 ? ? ? AX . n M 1 3 GLU 3 3 ? ? ? AX . n M 1 4 PHE 4 4 ? ? ? AX . n M 1 5 ARG 5 5 ? ? ? AX . n M 1 6 HIS 6 6 ? ? ? AX . n M 1 7 ASN 7 7 ? ? ? AX . n M 1 8 SER 8 8 ? ? ? AX . n M 1 9 GLY 9 9 ? ? ? AX . n M 1 10 TYR 10 10 ? ? ? AX . n M 1 11 GLU 11 11 ? ? ? AX . n M 1 12 VAL 12 12 ? ? ? AX . n M 1 13 HIS 13 13 13 HIS HIS AX . n M 1 14 HIS 14 14 14 HIS HIS AX . n M 1 15 GLN 15 15 15 GLN GLN AX . n M 1 16 LYS 16 16 16 LYS LYS AX . n M 1 17 LEU 17 17 17 LEU LEU AX . n M 1 18 VAL 18 18 18 VAL VAL AX . n M 1 19 PHE 19 19 19 PHE PHE AX . n M 1 20 PHE 20 20 20 PHE PHE AX . n M 1 21 ALA 21 21 21 ALA ALA AX . n M 1 22 GLU 22 22 22 GLU GLU AX . n M 1 23 ASP 23 23 23 ASP ASP AX . n M 1 24 VAL 24 24 24 VAL VAL AX . n M 1 25 GLY 25 25 25 GLY GLY AX . n M 1 26 SER 26 26 26 SER SER AX . n M 1 27 ASN 27 27 27 ASN ASN AX . n M 1 28 LYS 28 28 28 LYS LYS AX . n M 1 29 GLY 29 29 29 GLY GLY AX . n M 1 30 ALA 30 30 30 ALA ALA AX . n M 1 31 ILE 31 31 31 ILE ILE AX . n M 1 32 ILE 32 32 32 ILE ILE AX . n M 1 33 GLY 33 33 33 GLY GLY AX . n M 1 34 LEU 34 34 34 LEU LEU AX . n M 1 35 MET 35 35 35 MET MET AX . n M 1 36 VAL 36 36 36 VAL VAL AX . n M 1 37 GLY 37 37 37 GLY GLY AX . n M 1 38 GLY 38 38 38 GLY GLY AX . n M 1 39 VAL 39 39 39 VAL VAL AX . n M 1 40 VAL 40 40 ? ? ? AX . n N 1 1 ASP 1 1 ? ? ? AY . n N 1 2 ALA 2 2 ? ? ? AY . n N 1 3 GLU 3 3 ? ? ? AY . n N 1 4 PHE 4 4 ? ? ? AY . n N 1 5 ARG 5 5 ? ? ? AY . n N 1 6 HIS 6 6 ? ? ? AY . n N 1 7 ASN 7 7 ? ? ? AY . n N 1 8 SER 8 8 ? ? ? AY . n N 1 9 GLY 9 9 ? ? ? AY . n N 1 10 TYR 10 10 ? ? ? AY . n N 1 11 GLU 11 11 ? ? ? AY . n N 1 12 VAL 12 12 ? ? ? AY . n N 1 13 HIS 13 13 13 HIS HIS AY . n N 1 14 HIS 14 14 14 HIS HIS AY . n N 1 15 GLN 15 15 15 GLN GLN AY . n N 1 16 LYS 16 16 16 LYS LYS AY . n N 1 17 LEU 17 17 17 LEU LEU AY . n N 1 18 VAL 18 18 18 VAL VAL AY . n N 1 19 PHE 19 19 19 PHE PHE AY . n N 1 20 PHE 20 20 20 PHE PHE AY . n N 1 21 ALA 21 21 21 ALA ALA AY . n N 1 22 GLU 22 22 22 GLU GLU AY . n N 1 23 ASP 23 23 23 ASP ASP AY . n N 1 24 VAL 24 24 24 VAL VAL AY . n N 1 25 GLY 25 25 25 GLY GLY AY . n N 1 26 SER 26 26 26 SER SER AY . n N 1 27 ASN 27 27 27 ASN ASN AY . n N 1 28 LYS 28 28 28 LYS LYS AY . n N 1 29 GLY 29 29 29 GLY GLY AY . n N 1 30 ALA 30 30 30 ALA ALA AY . n N 1 31 ILE 31 31 31 ILE ILE AY . n N 1 32 ILE 32 32 32 ILE ILE AY . n N 1 33 GLY 33 33 33 GLY GLY AY . n N 1 34 LEU 34 34 34 LEU LEU AY . n N 1 35 MET 35 35 35 MET MET AY . n N 1 36 VAL 36 36 36 VAL VAL AY . n N 1 37 GLY 37 37 37 GLY GLY AY . n N 1 38 GLY 38 38 38 GLY GLY AY . n N 1 39 VAL 39 39 39 VAL VAL AY . n N 1 40 VAL 40 40 ? ? ? AY . n O 1 1 ASP 1 1 ? ? ? AZ . n O 1 2 ALA 2 2 ? ? ? AZ . n O 1 3 GLU 3 3 ? ? ? AZ . n O 1 4 PHE 4 4 ? ? ? AZ . n O 1 5 ARG 5 5 ? ? ? AZ . n O 1 6 HIS 6 6 ? ? ? AZ . n O 1 7 ASN 7 7 ? ? ? AZ . n O 1 8 SER 8 8 ? ? ? AZ . n O 1 9 GLY 9 9 ? ? ? AZ . n O 1 10 TYR 10 10 ? ? ? AZ . n O 1 11 GLU 11 11 ? ? ? AZ . n O 1 12 VAL 12 12 ? ? ? AZ . n O 1 13 HIS 13 13 13 HIS HIS AZ . n O 1 14 HIS 14 14 14 HIS HIS AZ . n O 1 15 GLN 15 15 15 GLN GLN AZ . n O 1 16 LYS 16 16 16 LYS LYS AZ . n O 1 17 LEU 17 17 17 LEU LEU AZ . n O 1 18 VAL 18 18 18 VAL VAL AZ . n O 1 19 PHE 19 19 19 PHE PHE AZ . n O 1 20 PHE 20 20 20 PHE PHE AZ . n O 1 21 ALA 21 21 21 ALA ALA AZ . n O 1 22 GLU 22 22 22 GLU GLU AZ . n O 1 23 ASP 23 23 23 ASP ASP AZ . n O 1 24 VAL 24 24 24 VAL VAL AZ . n O 1 25 GLY 25 25 25 GLY GLY AZ . n O 1 26 SER 26 26 26 SER SER AZ . n O 1 27 ASN 27 27 27 ASN ASN AZ . n O 1 28 LYS 28 28 28 LYS LYS AZ . n O 1 29 GLY 29 29 29 GLY GLY AZ . n O 1 30 ALA 30 30 30 ALA ALA AZ . n O 1 31 ILE 31 31 31 ILE ILE AZ . n O 1 32 ILE 32 32 32 ILE ILE AZ . n O 1 33 GLY 33 33 33 GLY GLY AZ . n O 1 34 LEU 34 34 34 LEU LEU AZ . n O 1 35 MET 35 35 35 MET MET AZ . n O 1 36 VAL 36 36 36 VAL VAL AZ . n O 1 37 GLY 37 37 37 GLY GLY AZ . n O 1 38 GLY 38 38 38 GLY GLY AZ . n O 1 39 VAL 39 39 39 VAL VAL AZ . n O 1 40 VAL 40 40 ? ? ? AZ . n P 1 1 ASP 1 1 ? ? ? Aa . n P 1 2 ALA 2 2 ? ? ? Aa . n P 1 3 GLU 3 3 ? ? ? Aa . n P 1 4 PHE 4 4 ? ? ? Aa . n P 1 5 ARG 5 5 ? ? ? Aa . n P 1 6 HIS 6 6 ? ? ? Aa . n P 1 7 ASN 7 7 ? ? ? Aa . n P 1 8 SER 8 8 ? ? ? Aa . n P 1 9 GLY 9 9 ? ? ? Aa . n P 1 10 TYR 10 10 ? ? ? Aa . n P 1 11 GLU 11 11 ? ? ? Aa . n P 1 12 VAL 12 12 ? ? ? Aa . n P 1 13 HIS 13 13 13 HIS HIS Aa . n P 1 14 HIS 14 14 14 HIS HIS Aa . n P 1 15 GLN 15 15 15 GLN GLN Aa . n P 1 16 LYS 16 16 16 LYS LYS Aa . n P 1 17 LEU 17 17 17 LEU LEU Aa . n P 1 18 VAL 18 18 18 VAL VAL Aa . n P 1 19 PHE 19 19 19 PHE PHE Aa . n P 1 20 PHE 20 20 20 PHE PHE Aa . n P 1 21 ALA 21 21 21 ALA ALA Aa . n P 1 22 GLU 22 22 22 GLU GLU Aa . n P 1 23 ASP 23 23 23 ASP ASP Aa . n P 1 24 VAL 24 24 24 VAL VAL Aa . n P 1 25 GLY 25 25 25 GLY GLY Aa . n P 1 26 SER 26 26 26 SER SER Aa . n P 1 27 ASN 27 27 27 ASN ASN Aa . n P 1 28 LYS 28 28 28 LYS LYS Aa . n P 1 29 GLY 29 29 29 GLY GLY Aa . n P 1 30 ALA 30 30 30 ALA ALA Aa . n P 1 31 ILE 31 31 31 ILE ILE Aa . n P 1 32 ILE 32 32 32 ILE ILE Aa . n P 1 33 GLY 33 33 33 GLY GLY Aa . n P 1 34 LEU 34 34 34 LEU LEU Aa . n P 1 35 MET 35 35 35 MET MET Aa . n P 1 36 VAL 36 36 36 VAL VAL Aa . n P 1 37 GLY 37 37 37 GLY GLY Aa . n P 1 38 GLY 38 38 38 GLY GLY Aa . n P 1 39 VAL 39 39 39 VAL VAL Aa . n P 1 40 VAL 40 40 ? ? ? Aa . n Q 1 1 ASP 1 1 ? ? ? Ab . n Q 1 2 ALA 2 2 ? ? ? Ab . n Q 1 3 GLU 3 3 ? ? ? Ab . n Q 1 4 PHE 4 4 ? ? ? Ab . n Q 1 5 ARG 5 5 ? ? ? Ab . n Q 1 6 HIS 6 6 ? ? ? Ab . n Q 1 7 ASN 7 7 ? ? ? Ab . n Q 1 8 SER 8 8 ? ? ? Ab . n Q 1 9 GLY 9 9 ? ? ? Ab . n Q 1 10 TYR 10 10 ? ? ? Ab . n Q 1 11 GLU 11 11 ? ? ? Ab . n Q 1 12 VAL 12 12 ? ? ? Ab . n Q 1 13 HIS 13 13 13 HIS HIS Ab . n Q 1 14 HIS 14 14 14 HIS HIS Ab . n Q 1 15 GLN 15 15 15 GLN GLN Ab . n Q 1 16 LYS 16 16 16 LYS LYS Ab . n Q 1 17 LEU 17 17 17 LEU LEU Ab . n Q 1 18 VAL 18 18 18 VAL VAL Ab . n Q 1 19 PHE 19 19 19 PHE PHE Ab . n Q 1 20 PHE 20 20 20 PHE PHE Ab . n Q 1 21 ALA 21 21 21 ALA ALA Ab . n Q 1 22 GLU 22 22 22 GLU GLU Ab . n Q 1 23 ASP 23 23 23 ASP ASP Ab . n Q 1 24 VAL 24 24 24 VAL VAL Ab . n Q 1 25 GLY 25 25 25 GLY GLY Ab . n Q 1 26 SER 26 26 26 SER SER Ab . n Q 1 27 ASN 27 27 27 ASN ASN Ab . n Q 1 28 LYS 28 28 28 LYS LYS Ab . n Q 1 29 GLY 29 29 29 GLY GLY Ab . n Q 1 30 ALA 30 30 30 ALA ALA Ab . n Q 1 31 ILE 31 31 31 ILE ILE Ab . n Q 1 32 ILE 32 32 32 ILE ILE Ab . n Q 1 33 GLY 33 33 33 GLY GLY Ab . n Q 1 34 LEU 34 34 34 LEU LEU Ab . n Q 1 35 MET 35 35 35 MET MET Ab . n Q 1 36 VAL 36 36 36 VAL VAL Ab . n Q 1 37 GLY 37 37 37 GLY GLY Ab . n Q 1 38 GLY 38 38 38 GLY GLY Ab . n Q 1 39 VAL 39 39 39 VAL VAL Ab . n Q 1 40 VAL 40 40 ? ? ? Ab . n R 1 1 ASP 1 1 ? ? ? Ac . n R 1 2 ALA 2 2 ? ? ? Ac . n R 1 3 GLU 3 3 ? ? ? Ac . n R 1 4 PHE 4 4 ? ? ? Ac . n R 1 5 ARG 5 5 ? ? ? Ac . n R 1 6 HIS 6 6 ? ? ? Ac . n R 1 7 ASN 7 7 ? ? ? Ac . n R 1 8 SER 8 8 ? ? ? Ac . n R 1 9 GLY 9 9 ? ? ? Ac . n R 1 10 TYR 10 10 ? ? ? Ac . n R 1 11 GLU 11 11 ? ? ? Ac . n R 1 12 VAL 12 12 ? ? ? Ac . n R 1 13 HIS 13 13 13 HIS HIS Ac . n R 1 14 HIS 14 14 14 HIS HIS Ac . n R 1 15 GLN 15 15 15 GLN GLN Ac . n R 1 16 LYS 16 16 16 LYS LYS Ac . n R 1 17 LEU 17 17 17 LEU LEU Ac . n R 1 18 VAL 18 18 18 VAL VAL Ac . n R 1 19 PHE 19 19 19 PHE PHE Ac . n R 1 20 PHE 20 20 20 PHE PHE Ac . n R 1 21 ALA 21 21 21 ALA ALA Ac . n R 1 22 GLU 22 22 22 GLU GLU Ac . n R 1 23 ASP 23 23 23 ASP ASP Ac . n R 1 24 VAL 24 24 24 VAL VAL Ac . n R 1 25 GLY 25 25 25 GLY GLY Ac . n R 1 26 SER 26 26 26 SER SER Ac . n R 1 27 ASN 27 27 27 ASN ASN Ac . n R 1 28 LYS 28 28 28 LYS LYS Ac . n R 1 29 GLY 29 29 29 GLY GLY Ac . n R 1 30 ALA 30 30 30 ALA ALA Ac . n R 1 31 ILE 31 31 31 ILE ILE Ac . n R 1 32 ILE 32 32 32 ILE ILE Ac . n R 1 33 GLY 33 33 33 GLY GLY Ac . n R 1 34 LEU 34 34 34 LEU LEU Ac . n R 1 35 MET 35 35 35 MET MET Ac . n R 1 36 VAL 36 36 36 VAL VAL Ac . n R 1 37 GLY 37 37 37 GLY GLY Ac . n R 1 38 GLY 38 38 38 GLY GLY Ac . n R 1 39 VAL 39 39 39 VAL VAL Ac . n R 1 40 VAL 40 40 ? ? ? Ac . n S 1 1 ASP 1 1 ? ? ? Ad . n S 1 2 ALA 2 2 ? ? ? Ad . n S 1 3 GLU 3 3 ? ? ? Ad . n S 1 4 PHE 4 4 ? ? ? Ad . n S 1 5 ARG 5 5 ? ? ? Ad . n S 1 6 HIS 6 6 ? ? ? Ad . n S 1 7 ASN 7 7 ? ? ? Ad . n S 1 8 SER 8 8 ? ? ? Ad . n S 1 9 GLY 9 9 ? ? ? Ad . n S 1 10 TYR 10 10 ? ? ? Ad . n S 1 11 GLU 11 11 ? ? ? Ad . n S 1 12 VAL 12 12 ? ? ? Ad . n S 1 13 HIS 13 13 13 HIS HIS Ad . n S 1 14 HIS 14 14 14 HIS HIS Ad . n S 1 15 GLN 15 15 15 GLN GLN Ad . n S 1 16 LYS 16 16 16 LYS LYS Ad . n S 1 17 LEU 17 17 17 LEU LEU Ad . n S 1 18 VAL 18 18 18 VAL VAL Ad . n S 1 19 PHE 19 19 19 PHE PHE Ad . n S 1 20 PHE 20 20 20 PHE PHE Ad . n S 1 21 ALA 21 21 21 ALA ALA Ad . n S 1 22 GLU 22 22 22 GLU GLU Ad . n S 1 23 ASP 23 23 23 ASP ASP Ad . n S 1 24 VAL 24 24 24 VAL VAL Ad . n S 1 25 GLY 25 25 25 GLY GLY Ad . n S 1 26 SER 26 26 26 SER SER Ad . n S 1 27 ASN 27 27 27 ASN ASN Ad . n S 1 28 LYS 28 28 28 LYS LYS Ad . n S 1 29 GLY 29 29 29 GLY GLY Ad . n S 1 30 ALA 30 30 30 ALA ALA Ad . n S 1 31 ILE 31 31 31 ILE ILE Ad . n S 1 32 ILE 32 32 32 ILE ILE Ad . n S 1 33 GLY 33 33 33 GLY GLY Ad . n S 1 34 LEU 34 34 34 LEU LEU Ad . n S 1 35 MET 35 35 35 MET MET Ad . n S 1 36 VAL 36 36 36 VAL VAL Ad . n S 1 37 GLY 37 37 37 GLY GLY Ad . n S 1 38 GLY 38 38 38 GLY GLY Ad . n S 1 39 VAL 39 39 39 VAL VAL Ad . n S 1 40 VAL 40 40 ? ? ? Ad . n T 1 1 ASP 1 1 ? ? ? Ae . n T 1 2 ALA 2 2 ? ? ? Ae . n T 1 3 GLU 3 3 ? ? ? Ae . n T 1 4 PHE 4 4 ? ? ? Ae . n T 1 5 ARG 5 5 ? ? ? Ae . n T 1 6 HIS 6 6 ? ? ? Ae . n T 1 7 ASN 7 7 ? ? ? Ae . n T 1 8 SER 8 8 ? ? ? Ae . n T 1 9 GLY 9 9 ? ? ? Ae . n T 1 10 TYR 10 10 ? ? ? Ae . n T 1 11 GLU 11 11 ? ? ? Ae . n T 1 12 VAL 12 12 ? ? ? Ae . n T 1 13 HIS 13 13 13 HIS HIS Ae . n T 1 14 HIS 14 14 14 HIS HIS Ae . n T 1 15 GLN 15 15 15 GLN GLN Ae . n T 1 16 LYS 16 16 16 LYS LYS Ae . n T 1 17 LEU 17 17 17 LEU LEU Ae . n T 1 18 VAL 18 18 18 VAL VAL Ae . n T 1 19 PHE 19 19 19 PHE PHE Ae . n T 1 20 PHE 20 20 20 PHE PHE Ae . n T 1 21 ALA 21 21 21 ALA ALA Ae . n T 1 22 GLU 22 22 22 GLU GLU Ae . n T 1 23 ASP 23 23 23 ASP ASP Ae . n T 1 24 VAL 24 24 24 VAL VAL Ae . n T 1 25 GLY 25 25 25 GLY GLY Ae . n T 1 26 SER 26 26 26 SER SER Ae . n T 1 27 ASN 27 27 27 ASN ASN Ae . n T 1 28 LYS 28 28 28 LYS LYS Ae . n T 1 29 GLY 29 29 29 GLY GLY Ae . n T 1 30 ALA 30 30 30 ALA ALA Ae . n T 1 31 ILE 31 31 31 ILE ILE Ae . n T 1 32 ILE 32 32 32 ILE ILE Ae . n T 1 33 GLY 33 33 33 GLY GLY Ae . n T 1 34 LEU 34 34 34 LEU LEU Ae . n T 1 35 MET 35 35 35 MET MET Ae . n T 1 36 VAL 36 36 36 VAL VAL Ae . n T 1 37 GLY 37 37 37 GLY GLY Ae . n T 1 38 GLY 38 38 38 GLY GLY Ae . n T 1 39 VAL 39 39 39 VAL VAL Ae . n T 1 40 VAL 40 40 ? ? ? Ae . n U 1 1 ASP 1 1 ? ? ? Af . n U 1 2 ALA 2 2 ? ? ? Af . n U 1 3 GLU 3 3 ? ? ? Af . n U 1 4 PHE 4 4 ? ? ? Af . n U 1 5 ARG 5 5 ? ? ? Af . n U 1 6 HIS 6 6 ? ? ? Af . n U 1 7 ASN 7 7 ? ? ? Af . n U 1 8 SER 8 8 ? ? ? Af . n U 1 9 GLY 9 9 ? ? ? Af . n U 1 10 TYR 10 10 ? ? ? Af . n U 1 11 GLU 11 11 ? ? ? Af . n U 1 12 VAL 12 12 ? ? ? Af . n U 1 13 HIS 13 13 13 HIS HIS Af . n U 1 14 HIS 14 14 14 HIS HIS Af . n U 1 15 GLN 15 15 15 GLN GLN Af . n U 1 16 LYS 16 16 16 LYS LYS Af . n U 1 17 LEU 17 17 17 LEU LEU Af . n U 1 18 VAL 18 18 18 VAL VAL Af . n U 1 19 PHE 19 19 19 PHE PHE Af . n U 1 20 PHE 20 20 20 PHE PHE Af . n U 1 21 ALA 21 21 21 ALA ALA Af . n U 1 22 GLU 22 22 22 GLU GLU Af . n U 1 23 ASP 23 23 23 ASP ASP Af . n U 1 24 VAL 24 24 24 VAL VAL Af . n U 1 25 GLY 25 25 25 GLY GLY Af . n U 1 26 SER 26 26 26 SER SER Af . n U 1 27 ASN 27 27 27 ASN ASN Af . n U 1 28 LYS 28 28 28 LYS LYS Af . n U 1 29 GLY 29 29 29 GLY GLY Af . n U 1 30 ALA 30 30 30 ALA ALA Af . n U 1 31 ILE 31 31 31 ILE ILE Af . n U 1 32 ILE 32 32 32 ILE ILE Af . n U 1 33 GLY 33 33 33 GLY GLY Af . n U 1 34 LEU 34 34 34 LEU LEU Af . n U 1 35 MET 35 35 35 MET MET Af . n U 1 36 VAL 36 36 36 VAL VAL Af . n U 1 37 GLY 37 37 37 GLY GLY Af . n U 1 38 GLY 38 38 38 GLY GLY Af . n U 1 39 VAL 39 39 39 VAL VAL Af . n U 1 40 VAL 40 40 ? ? ? Af . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9M5Q _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9M5Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9M5Q _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 9M5Q _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0034 ? 4221 ? s_bond_nonh_d 0.0119 ? ? 'ELECTRON MICROSCOPY' ? 0.7885 ? 5628 ? s_angle_nonh_deg 1.7701 ? ? 'ELECTRON MICROSCOPY' ? 7.6566 ? 546 ? s_dihedral_angle_1_deg 5 ? ? 'ELECTRON MICROSCOPY' ? 0.1459 ? 42 ? s_dihedral_angle_2_deg 5 ? ? 'ELECTRON MICROSCOPY' ? 9.1899 ? 1197 ? s_dihedral_angle_3_deg 10 ? ? 'ELECTRON MICROSCOPY' ? 10.5828 ? 273 ? s_dihedral_angle_6_deg 10 ? ? 'ELECTRON MICROSCOPY' ? 0.0255 ? 630 ? s_chiral_restr 0.1302 ? ? 'ELECTRON MICROSCOPY' ? 0.0022 ? 5796 ? s_planes 0.02 ? ? 'ELECTRON MICROSCOPY' ? 0.1978 ? 4972 ? s_nbd 0.2 ? ? 'ELECTRON MICROSCOPY' ? 0.2005 ? 7503 ? s_nbtor 0.2 ? ? 'ELECTRON MICROSCOPY' ? 0.1112 ? 133 ? s_hbond_nbd 0.2 ? ? # _struct.entry_id 9M5Q _struct.title 'V-type (V1-type) amyloid fibril (40) of Tottori (D7N) mutant' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9M5Q _struct_keywords.text 'Amyloid, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? K N N 1 ? L N N 1 ? M N N 1 ? N N N 1 ? O N N 1 ? P N N 1 ? Q N N 1 ? R N N 1 ? S N N 1 ? T N N 1 ? U N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A4_HUMAN _struct_ref.pdbx_db_accession P05067 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV _struct_ref.pdbx_align_begin 672 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9M5Q AL 1 ? 40 ? P05067 672 ? 711 ? 1 40 2 1 9M5Q AM 1 ? 40 ? P05067 672 ? 711 ? 1 40 3 1 9M5Q AN 1 ? 40 ? P05067 672 ? 711 ? 1 40 4 1 9M5Q AO 1 ? 40 ? P05067 672 ? 711 ? 1 40 5 1 9M5Q AP 1 ? 40 ? P05067 672 ? 711 ? 1 40 6 1 9M5Q AQ 1 ? 40 ? P05067 672 ? 711 ? 1 40 7 1 9M5Q AR 1 ? 40 ? P05067 672 ? 711 ? 1 40 8 1 9M5Q AS 1 ? 40 ? P05067 672 ? 711 ? 1 40 9 1 9M5Q AT 1 ? 40 ? P05067 672 ? 711 ? 1 40 10 1 9M5Q AU 1 ? 40 ? P05067 672 ? 711 ? 1 40 11 1 9M5Q AV 1 ? 40 ? P05067 672 ? 711 ? 1 40 12 1 9M5Q AW 1 ? 40 ? P05067 672 ? 711 ? 1 40 13 1 9M5Q AX 1 ? 40 ? P05067 672 ? 711 ? 1 40 14 1 9M5Q AY 1 ? 40 ? P05067 672 ? 711 ? 1 40 15 1 9M5Q AZ 1 ? 40 ? P05067 672 ? 711 ? 1 40 16 1 9M5Q Aa 1 ? 40 ? P05067 672 ? 711 ? 1 40 17 1 9M5Q Ab 1 ? 40 ? P05067 672 ? 711 ? 1 40 18 1 9M5Q Ac 1 ? 40 ? P05067 672 ? 711 ? 1 40 19 1 9M5Q Ad 1 ? 40 ? P05067 672 ? 711 ? 1 40 20 1 9M5Q Ae 1 ? 40 ? P05067 672 ? 711 ? 1 40 21 1 9M5Q Af 1 ? 40 ? P05067 672 ? 711 ? 1 40 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9M5Q ASN AL 7 ? UNP P05067 ASP 678 variant 7 1 2 9M5Q ASN AM 7 ? UNP P05067 ASP 678 variant 7 2 3 9M5Q ASN AN 7 ? UNP P05067 ASP 678 variant 7 3 4 9M5Q ASN AO 7 ? UNP P05067 ASP 678 variant 7 4 5 9M5Q ASN AP 7 ? UNP P05067 ASP 678 variant 7 5 6 9M5Q ASN AQ 7 ? UNP P05067 ASP 678 variant 7 6 7 9M5Q ASN AR 7 ? UNP P05067 ASP 678 variant 7 7 8 9M5Q ASN AS 7 ? UNP P05067 ASP 678 variant 7 8 9 9M5Q ASN AT 7 ? UNP P05067 ASP 678 variant 7 9 10 9M5Q ASN AU 7 ? UNP P05067 ASP 678 variant 7 10 11 9M5Q ASN AV 7 ? UNP P05067 ASP 678 variant 7 11 12 9M5Q ASN AW 7 ? UNP P05067 ASP 678 variant 7 12 13 9M5Q ASN AX 7 ? UNP P05067 ASP 678 variant 7 13 14 9M5Q ASN AY 7 ? UNP P05067 ASP 678 variant 7 14 15 9M5Q ASN AZ 7 ? UNP P05067 ASP 678 variant 7 15 16 9M5Q ASN Aa 7 ? UNP P05067 ASP 678 variant 7 16 17 9M5Q ASN Ab 7 ? UNP P05067 ASP 678 variant 7 17 18 9M5Q ASN Ac 7 ? UNP P05067 ASP 678 variant 7 18 19 9M5Q ASN Ad 7 ? UNP P05067 ASP 678 variant 7 19 20 9M5Q ASN Ae 7 ? UNP P05067 ASP 678 variant 7 20 21 9M5Q ASN Af 7 ? UNP P05067 ASP 678 variant 7 21 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 21-meric _pdbx_struct_assembly.oligomeric_count 21 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 11 ? AA2 ? 14 ? AA3 ? 10 ? AA4 ? 10 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? parallel AA1 7 8 ? parallel AA1 8 9 ? parallel AA1 9 10 ? parallel AA1 10 11 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 4 6 ? parallel AA2 5 7 ? parallel AA2 6 8 ? parallel AA2 7 9 ? parallel AA2 8 9 ? parallel AA2 9 10 ? parallel AA2 10 11 ? parallel AA2 11 12 ? parallel AA2 12 13 ? parallel AA2 12 14 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA3 4 5 ? parallel AA3 5 6 ? parallel AA3 6 7 ? parallel AA3 7 8 ? parallel AA3 8 9 ? parallel AA3 9 10 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel AA4 5 6 ? parallel AA4 6 7 ? parallel AA4 7 8 ? parallel AA4 8 9 ? parallel AA4 9 10 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 HIS A 14 ? PHE A 20 ? HIS AL 14 PHE AL 20 AA1 2 HIS C 14 ? PHE C 20 ? HIS AN 14 PHE AN 20 AA1 3 HIS E 14 ? PHE E 20 ? HIS AP 14 PHE AP 20 AA1 4 HIS G 14 ? PHE G 20 ? HIS AR 14 PHE AR 20 AA1 5 HIS I 14 ? PHE I 20 ? HIS AT 14 PHE AT 20 AA1 6 HIS K 14 ? PHE K 20 ? HIS AV 14 PHE AV 20 AA1 7 HIS M 14 ? PHE M 20 ? HIS AX 14 PHE AX 20 AA1 8 HIS O 14 ? PHE O 20 ? HIS AZ 14 PHE AZ 20 AA1 9 HIS Q 14 ? PHE Q 20 ? HIS Ab 14 PHE Ab 20 AA1 10 HIS S 14 ? PHE S 20 ? HIS Ad 14 PHE Ad 20 AA1 11 HIS U 14 ? PHE U 20 ? HIS Af 14 PHE Af 20 AA2 1 ALA A 30 ? GLY A 37 ? ALA AL 30 GLY AL 37 AA2 2 ALA C 30 ? GLY C 37 ? ALA AN 30 GLY AN 37 AA2 3 ALA E 30 ? GLY E 37 ? ALA AP 30 GLY AP 37 AA2 4 ALA G 30 ? GLY G 37 ? ALA AR 30 GLY AR 37 AA2 5 ALA I 30 ? ILE I 32 ? ALA AT 30 ILE AT 32 AA2 6 MET I 35 ? GLY I 37 ? MET AT 35 GLY AT 37 AA2 7 ALA K 30 ? ILE K 32 ? ALA AV 30 ILE AV 32 AA2 8 MET K 35 ? GLY K 37 ? MET AV 35 GLY AV 37 AA2 9 ALA M 30 ? GLY M 37 ? ALA AX 30 GLY AX 37 AA2 10 ALA O 30 ? GLY O 37 ? ALA AZ 30 GLY AZ 37 AA2 11 ALA Q 30 ? VAL Q 36 ? ALA Ab 30 VAL Ab 36 AA2 12 ALA S 30 ? VAL S 36 ? ALA Ad 30 VAL Ad 36 AA2 13 ALA U 30 ? ILE U 32 ? ALA Af 30 ILE Af 32 AA2 14 MET U 35 ? VAL U 36 ? MET Af 35 VAL Af 36 AA3 1 HIS B 14 ? PHE B 20 ? HIS AM 14 PHE AM 20 AA3 2 HIS D 14 ? PHE D 20 ? HIS AO 14 PHE AO 20 AA3 3 HIS F 14 ? PHE F 20 ? HIS AQ 14 PHE AQ 20 AA3 4 HIS H 14 ? PHE H 20 ? HIS AS 14 PHE AS 20 AA3 5 HIS J 14 ? PHE J 20 ? HIS AU 14 PHE AU 20 AA3 6 HIS L 14 ? PHE L 20 ? HIS AW 14 PHE AW 20 AA3 7 HIS N 14 ? PHE N 20 ? HIS AY 14 PHE AY 20 AA3 8 HIS P 14 ? PHE P 20 ? HIS Aa 14 PHE Aa 20 AA3 9 HIS R 14 ? PHE R 20 ? HIS Ac 14 PHE Ac 20 AA3 10 HIS T 14 ? PHE T 20 ? HIS Ae 14 PHE Ae 20 AA4 1 ALA B 30 ? GLY B 37 ? ALA AM 30 GLY AM 37 AA4 2 ALA D 30 ? GLY D 37 ? ALA AO 30 GLY AO 37 AA4 3 ALA F 30 ? GLY F 37 ? ALA AQ 30 GLY AQ 37 AA4 4 ALA H 30 ? GLY H 37 ? ALA AS 30 GLY AS 37 AA4 5 ALA J 30 ? GLY J 37 ? ALA AU 30 GLY AU 37 AA4 6 ALA L 30 ? GLY L 37 ? ALA AW 30 GLY AW 37 AA4 7 ALA N 30 ? GLY N 37 ? ALA AY 30 GLY AY 37 AA4 8 ALA P 30 ? GLY P 37 ? ALA Aa 30 GLY Aa 37 AA4 9 ALA R 30 ? GLY R 37 ? ALA Ac 30 GLY Ac 37 AA4 10 ALA T 30 ? GLY T 37 ? ALA Ae 30 GLY Ae 37 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 20 ? N PHE AL 20 O PHE C 19 ? O PHE AN 19 AA1 2 3 N PHE C 20 ? N PHE AN 20 O PHE E 19 ? O PHE AP 19 AA1 3 4 N PHE E 20 ? N PHE AP 20 O PHE G 19 ? O PHE AR 19 AA1 4 5 N PHE G 20 ? N PHE AR 20 O PHE I 19 ? O PHE AT 19 AA1 5 6 N PHE I 20 ? N PHE AT 20 O PHE K 19 ? O PHE AV 19 AA1 6 7 N PHE K 20 ? N PHE AV 20 O PHE M 19 ? O PHE AX 19 AA1 7 8 N PHE M 20 ? N PHE AX 20 O PHE O 19 ? O PHE AZ 19 AA1 8 9 N PHE O 20 ? N PHE AZ 20 O PHE Q 19 ? O PHE Ab 19 AA1 9 10 N PHE Q 20 ? N PHE Ab 20 O PHE S 19 ? O PHE Ad 19 AA1 10 11 N PHE S 20 ? N PHE Ad 20 O PHE U 19 ? O PHE Af 19 AA2 1 2 N ILE A 31 ? N ILE AL 31 O ILE C 32 ? O ILE AN 32 AA2 2 3 N ILE C 31 ? N ILE AN 31 O ILE E 32 ? O ILE AP 32 AA2 3 4 N ILE E 31 ? N ILE AP 31 O ILE G 32 ? O ILE AR 32 AA2 4 5 N ILE G 31 ? N ILE AR 31 O ILE I 32 ? O ILE AT 32 AA2 4 6 N VAL G 36 ? N VAL AR 36 O GLY I 37 ? O GLY AT 37 AA2 5 7 N ILE I 31 ? N ILE AT 31 O ILE K 32 ? O ILE AV 32 AA2 6 8 N VAL I 36 ? N VAL AT 36 O GLY K 37 ? O GLY AV 37 AA2 7 9 N ILE K 31 ? N ILE AV 31 O ILE M 32 ? O ILE AX 32 AA2 8 9 N VAL K 36 ? N VAL AV 36 O GLY M 37 ? O GLY AX 37 AA2 9 10 N ILE M 31 ? N ILE AX 31 O ILE O 32 ? O ILE AZ 32 AA2 10 11 N ILE O 31 ? N ILE AZ 31 O ILE Q 32 ? O ILE Ab 32 AA2 11 12 N ILE Q 31 ? N ILE Ab 31 O ILE S 32 ? O ILE Ad 32 AA2 12 13 N ILE S 31 ? N ILE Ad 31 O ILE U 32 ? O ILE Af 32 AA2 12 14 N VAL S 36 ? N VAL Ad 36 O MET U 35 ? O MET Af 35 AA3 1 2 N PHE B 20 ? N PHE AM 20 O PHE D 19 ? O PHE AO 19 AA3 2 3 N PHE D 20 ? N PHE AO 20 O PHE F 19 ? O PHE AQ 19 AA3 3 4 N VAL F 18 ? N VAL AQ 18 O LEU H 17 ? O LEU AS 17 AA3 4 5 N PHE H 20 ? N PHE AS 20 O PHE J 19 ? O PHE AU 19 AA3 5 6 N PHE J 20 ? N PHE AU 20 O PHE L 19 ? O PHE AW 19 AA3 6 7 N PHE L 20 ? N PHE AW 20 O PHE N 19 ? O PHE AY 19 AA3 7 8 N PHE N 20 ? N PHE AY 20 O PHE P 19 ? O PHE Aa 19 AA3 8 9 N PHE P 20 ? N PHE Aa 20 O PHE R 19 ? O PHE Ac 19 AA3 9 10 N PHE R 20 ? N PHE Ac 20 O PHE T 19 ? O PHE Ae 19 AA4 1 2 N ILE B 31 ? N ILE AM 31 O ILE D 32 ? O ILE AO 32 AA4 2 3 N ILE D 31 ? N ILE AO 31 O ILE F 32 ? O ILE AQ 32 AA4 3 4 N ILE F 31 ? N ILE AQ 31 O ILE H 32 ? O ILE AS 32 AA4 4 5 N ILE H 31 ? N ILE AS 31 O ILE J 32 ? O ILE AU 32 AA4 5 6 N ILE J 31 ? N ILE AU 31 O ILE L 32 ? O ILE AW 32 AA4 6 7 N ILE L 31 ? N ILE AW 31 O ILE N 32 ? O ILE AY 32 AA4 7 8 N ILE N 31 ? N ILE AY 31 O ILE P 32 ? O ILE Aa 32 AA4 8 9 N ILE P 31 ? N ILE Aa 31 O ILE R 32 ? O ILE Ac 32 AA4 9 10 N ILE R 31 ? N ILE Ac 31 O ILE T 32 ? O ILE Ae 32 # _pdbx_entry_details.entry_id 9M5Q _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU AL 22 ? ? 55.08 -159.97 2 1 ALA AM 21 ? ? -77.59 -165.70 3 1 ALA AN 21 ? ? -91.77 -149.47 4 1 ALA AP 21 ? ? -83.31 -148.96 5 1 GLU AQ 22 ? ? -9.53 -83.03 6 1 ALA AR 21 ? ? -91.50 -150.17 7 1 ALA AS 21 ? ? -98.54 -157.95 8 1 ALA AT 21 ? ? -93.85 -156.88 9 1 ALA AU 21 ? ? -90.83 -147.53 10 1 ALA AV 21 ? ? -88.42 -153.77 11 1 ALA AW 21 ? ? -92.41 -153.66 12 1 ALA AX 21 ? ? -92.07 -149.85 13 1 ALA AY 21 ? ? -83.78 -146.33 14 1 GLU AY 22 ? ? -61.39 -76.81 15 1 ASP AY 23 ? ? -106.73 50.85 16 1 ALA AZ 21 ? ? -84.26 -147.78 17 1 ALA Aa 21 ? ? -93.03 -156.26 18 1 ALA Ab 21 ? ? -94.58 -153.40 19 1 ALA Ac 21 ? ? -84.76 -146.55 20 1 GLU Ac 22 ? ? -64.44 -75.89 21 1 ASP Ac 23 ? ? -106.15 53.63 22 1 ALA Ad 21 ? ? -87.52 -146.78 23 1 GLU Ad 22 ? ? -61.64 -72.46 24 1 ASP Ad 23 ? ? -110.87 51.91 25 1 ALA Ae 21 ? ? -89.06 -134.30 26 1 ALA Af 21 ? ? -88.84 -132.13 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9M5Q _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9M5Q _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.3 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 54381 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'V-shaped amyloid beta fibre (type 1) (Tottori mutant - D7N)' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9M5Q _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 0.021 _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 1400 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9M5Q _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9M5Q _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state 'HELICAL ARRAY' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 AL ASP 1 ? A ASP 1 2 1 Y 1 AL ALA 2 ? A ALA 2 3 1 Y 1 AL GLU 3 ? A GLU 3 4 1 Y 1 AL PHE 4 ? A PHE 4 5 1 Y 1 AL ARG 5 ? A ARG 5 6 1 Y 1 AL HIS 6 ? A HIS 6 7 1 Y 1 AL ASN 7 ? A ASN 7 8 1 Y 1 AL SER 8 ? A SER 8 9 1 Y 1 AL GLY 9 ? A GLY 9 10 1 Y 1 AL TYR 10 ? A TYR 10 11 1 Y 1 AL GLU 11 ? A GLU 11 12 1 Y 1 AL VAL 12 ? A VAL 12 13 1 Y 1 AL VAL 40 ? A VAL 40 14 1 Y 1 AM ASP 1 ? B ASP 1 15 1 Y 1 AM ALA 2 ? B ALA 2 16 1 Y 1 AM GLU 3 ? B GLU 3 17 1 Y 1 AM PHE 4 ? B PHE 4 18 1 Y 1 AM ARG 5 ? B ARG 5 19 1 Y 1 AM HIS 6 ? B HIS 6 20 1 Y 1 AM ASN 7 ? B ASN 7 21 1 Y 1 AM SER 8 ? B SER 8 22 1 Y 1 AM GLY 9 ? B GLY 9 23 1 Y 1 AM TYR 10 ? B TYR 10 24 1 Y 1 AM GLU 11 ? B GLU 11 25 1 Y 1 AM VAL 12 ? B VAL 12 26 1 Y 1 AM VAL 40 ? B VAL 40 27 1 Y 1 AN ASP 1 ? C ASP 1 28 1 Y 1 AN ALA 2 ? C ALA 2 29 1 Y 1 AN GLU 3 ? C GLU 3 30 1 Y 1 AN PHE 4 ? C PHE 4 31 1 Y 1 AN ARG 5 ? C ARG 5 32 1 Y 1 AN HIS 6 ? C HIS 6 33 1 Y 1 AN ASN 7 ? C ASN 7 34 1 Y 1 AN SER 8 ? C SER 8 35 1 Y 1 AN GLY 9 ? C GLY 9 36 1 Y 1 AN TYR 10 ? C TYR 10 37 1 Y 1 AN GLU 11 ? C GLU 11 38 1 Y 1 AN VAL 12 ? C VAL 12 39 1 Y 1 AN VAL 40 ? C VAL 40 40 1 Y 1 AO ASP 1 ? D ASP 1 41 1 Y 1 AO ALA 2 ? D ALA 2 42 1 Y 1 AO GLU 3 ? D GLU 3 43 1 Y 1 AO PHE 4 ? D PHE 4 44 1 Y 1 AO ARG 5 ? D ARG 5 45 1 Y 1 AO HIS 6 ? D HIS 6 46 1 Y 1 AO ASN 7 ? D ASN 7 47 1 Y 1 AO SER 8 ? D SER 8 48 1 Y 1 AO GLY 9 ? D GLY 9 49 1 Y 1 AO TYR 10 ? D TYR 10 50 1 Y 1 AO GLU 11 ? D GLU 11 51 1 Y 1 AO VAL 12 ? D VAL 12 52 1 Y 1 AO VAL 40 ? D VAL 40 53 1 Y 1 AP ASP 1 ? E ASP 1 54 1 Y 1 AP ALA 2 ? E ALA 2 55 1 Y 1 AP GLU 3 ? E GLU 3 56 1 Y 1 AP PHE 4 ? E PHE 4 57 1 Y 1 AP ARG 5 ? E ARG 5 58 1 Y 1 AP HIS 6 ? E HIS 6 59 1 Y 1 AP ASN 7 ? E ASN 7 60 1 Y 1 AP SER 8 ? E SER 8 61 1 Y 1 AP GLY 9 ? E GLY 9 62 1 Y 1 AP TYR 10 ? E TYR 10 63 1 Y 1 AP GLU 11 ? E GLU 11 64 1 Y 1 AP VAL 12 ? E VAL 12 65 1 Y 1 AP VAL 40 ? E VAL 40 66 1 Y 1 AQ ASP 1 ? F ASP 1 67 1 Y 1 AQ ALA 2 ? F ALA 2 68 1 Y 1 AQ GLU 3 ? F GLU 3 69 1 Y 1 AQ PHE 4 ? F PHE 4 70 1 Y 1 AQ ARG 5 ? F ARG 5 71 1 Y 1 AQ HIS 6 ? F HIS 6 72 1 Y 1 AQ ASN 7 ? F ASN 7 73 1 Y 1 AQ SER 8 ? F SER 8 74 1 Y 1 AQ GLY 9 ? F GLY 9 75 1 Y 1 AQ TYR 10 ? F TYR 10 76 1 Y 1 AQ GLU 11 ? F GLU 11 77 1 Y 1 AQ VAL 12 ? F VAL 12 78 1 Y 1 AQ VAL 40 ? F VAL 40 79 1 Y 1 AR ASP 1 ? G ASP 1 80 1 Y 1 AR ALA 2 ? G ALA 2 81 1 Y 1 AR GLU 3 ? G GLU 3 82 1 Y 1 AR PHE 4 ? G PHE 4 83 1 Y 1 AR ARG 5 ? G ARG 5 84 1 Y 1 AR HIS 6 ? G HIS 6 85 1 Y 1 AR ASN 7 ? G ASN 7 86 1 Y 1 AR SER 8 ? G SER 8 87 1 Y 1 AR GLY 9 ? G GLY 9 88 1 Y 1 AR TYR 10 ? G TYR 10 89 1 Y 1 AR GLU 11 ? G GLU 11 90 1 Y 1 AR VAL 12 ? G VAL 12 91 1 Y 1 AR VAL 40 ? G VAL 40 92 1 Y 1 AS ASP 1 ? H ASP 1 93 1 Y 1 AS ALA 2 ? H ALA 2 94 1 Y 1 AS GLU 3 ? H GLU 3 95 1 Y 1 AS PHE 4 ? H PHE 4 96 1 Y 1 AS ARG 5 ? H ARG 5 97 1 Y 1 AS HIS 6 ? H HIS 6 98 1 Y 1 AS ASN 7 ? H ASN 7 99 1 Y 1 AS SER 8 ? H SER 8 100 1 Y 1 AS GLY 9 ? H GLY 9 101 1 Y 1 AS TYR 10 ? H TYR 10 102 1 Y 1 AS GLU 11 ? H GLU 11 103 1 Y 1 AS VAL 12 ? H VAL 12 104 1 Y 1 AS VAL 40 ? H VAL 40 105 1 Y 1 AT ASP 1 ? I ASP 1 106 1 Y 1 AT ALA 2 ? I ALA 2 107 1 Y 1 AT GLU 3 ? I GLU 3 108 1 Y 1 AT PHE 4 ? I PHE 4 109 1 Y 1 AT ARG 5 ? I ARG 5 110 1 Y 1 AT HIS 6 ? I HIS 6 111 1 Y 1 AT ASN 7 ? I ASN 7 112 1 Y 1 AT SER 8 ? I SER 8 113 1 Y 1 AT GLY 9 ? I GLY 9 114 1 Y 1 AT TYR 10 ? I TYR 10 115 1 Y 1 AT GLU 11 ? I GLU 11 116 1 Y 1 AT VAL 12 ? I VAL 12 117 1 Y 1 AT VAL 40 ? I VAL 40 118 1 Y 1 AU ASP 1 ? J ASP 1 119 1 Y 1 AU ALA 2 ? J ALA 2 120 1 Y 1 AU GLU 3 ? J GLU 3 121 1 Y 1 AU PHE 4 ? J PHE 4 122 1 Y 1 AU ARG 5 ? J ARG 5 123 1 Y 1 AU HIS 6 ? J HIS 6 124 1 Y 1 AU ASN 7 ? J ASN 7 125 1 Y 1 AU SER 8 ? J SER 8 126 1 Y 1 AU GLY 9 ? J GLY 9 127 1 Y 1 AU TYR 10 ? J TYR 10 128 1 Y 1 AU GLU 11 ? J GLU 11 129 1 Y 1 AU VAL 12 ? J VAL 12 130 1 Y 1 AU VAL 40 ? J VAL 40 131 1 Y 1 AV ASP 1 ? K ASP 1 132 1 Y 1 AV ALA 2 ? K ALA 2 133 1 Y 1 AV GLU 3 ? K GLU 3 134 1 Y 1 AV PHE 4 ? K PHE 4 135 1 Y 1 AV ARG 5 ? K ARG 5 136 1 Y 1 AV HIS 6 ? K HIS 6 137 1 Y 1 AV ASN 7 ? K ASN 7 138 1 Y 1 AV SER 8 ? K SER 8 139 1 Y 1 AV GLY 9 ? K GLY 9 140 1 Y 1 AV TYR 10 ? K TYR 10 141 1 Y 1 AV GLU 11 ? K GLU 11 142 1 Y 1 AV VAL 12 ? K VAL 12 143 1 Y 1 AV VAL 40 ? K VAL 40 144 1 Y 1 AW ASP 1 ? L ASP 1 145 1 Y 1 AW ALA 2 ? L ALA 2 146 1 Y 1 AW GLU 3 ? L GLU 3 147 1 Y 1 AW PHE 4 ? L PHE 4 148 1 Y 1 AW ARG 5 ? L ARG 5 149 1 Y 1 AW HIS 6 ? L HIS 6 150 1 Y 1 AW ASN 7 ? L ASN 7 151 1 Y 1 AW SER 8 ? L SER 8 152 1 Y 1 AW GLY 9 ? L GLY 9 153 1 Y 1 AW TYR 10 ? L TYR 10 154 1 Y 1 AW GLU 11 ? L GLU 11 155 1 Y 1 AW VAL 12 ? L VAL 12 156 1 Y 1 AW VAL 40 ? L VAL 40 157 1 Y 1 AX ASP 1 ? M ASP 1 158 1 Y 1 AX ALA 2 ? M ALA 2 159 1 Y 1 AX GLU 3 ? M GLU 3 160 1 Y 1 AX PHE 4 ? M PHE 4 161 1 Y 1 AX ARG 5 ? M ARG 5 162 1 Y 1 AX HIS 6 ? M HIS 6 163 1 Y 1 AX ASN 7 ? M ASN 7 164 1 Y 1 AX SER 8 ? M SER 8 165 1 Y 1 AX GLY 9 ? M GLY 9 166 1 Y 1 AX TYR 10 ? M TYR 10 167 1 Y 1 AX GLU 11 ? M GLU 11 168 1 Y 1 AX VAL 12 ? M VAL 12 169 1 Y 1 AX VAL 40 ? M VAL 40 170 1 Y 1 AY ASP 1 ? N ASP 1 171 1 Y 1 AY ALA 2 ? N ALA 2 172 1 Y 1 AY GLU 3 ? N GLU 3 173 1 Y 1 AY PHE 4 ? N PHE 4 174 1 Y 1 AY ARG 5 ? N ARG 5 175 1 Y 1 AY HIS 6 ? N HIS 6 176 1 Y 1 AY ASN 7 ? N ASN 7 177 1 Y 1 AY SER 8 ? N SER 8 178 1 Y 1 AY GLY 9 ? N GLY 9 179 1 Y 1 AY TYR 10 ? N TYR 10 180 1 Y 1 AY GLU 11 ? N GLU 11 181 1 Y 1 AY VAL 12 ? N VAL 12 182 1 Y 1 AY VAL 40 ? N VAL 40 183 1 Y 1 AZ ASP 1 ? O ASP 1 184 1 Y 1 AZ ALA 2 ? O ALA 2 185 1 Y 1 AZ GLU 3 ? O GLU 3 186 1 Y 1 AZ PHE 4 ? O PHE 4 187 1 Y 1 AZ ARG 5 ? O ARG 5 188 1 Y 1 AZ HIS 6 ? O HIS 6 189 1 Y 1 AZ ASN 7 ? O ASN 7 190 1 Y 1 AZ SER 8 ? O SER 8 191 1 Y 1 AZ GLY 9 ? O GLY 9 192 1 Y 1 AZ TYR 10 ? O TYR 10 193 1 Y 1 AZ GLU 11 ? O GLU 11 194 1 Y 1 AZ VAL 12 ? O VAL 12 195 1 Y 1 AZ VAL 40 ? O VAL 40 196 1 Y 1 Aa ASP 1 ? P ASP 1 197 1 Y 1 Aa ALA 2 ? P ALA 2 198 1 Y 1 Aa GLU 3 ? P GLU 3 199 1 Y 1 Aa PHE 4 ? P PHE 4 200 1 Y 1 Aa ARG 5 ? P ARG 5 201 1 Y 1 Aa HIS 6 ? P HIS 6 202 1 Y 1 Aa ASN 7 ? P ASN 7 203 1 Y 1 Aa SER 8 ? P SER 8 204 1 Y 1 Aa GLY 9 ? P GLY 9 205 1 Y 1 Aa TYR 10 ? P TYR 10 206 1 Y 1 Aa GLU 11 ? P GLU 11 207 1 Y 1 Aa VAL 12 ? P VAL 12 208 1 Y 1 Aa VAL 40 ? P VAL 40 209 1 Y 1 Ab ASP 1 ? Q ASP 1 210 1 Y 1 Ab ALA 2 ? Q ALA 2 211 1 Y 1 Ab GLU 3 ? Q GLU 3 212 1 Y 1 Ab PHE 4 ? Q PHE 4 213 1 Y 1 Ab ARG 5 ? Q ARG 5 214 1 Y 1 Ab HIS 6 ? Q HIS 6 215 1 Y 1 Ab ASN 7 ? Q ASN 7 216 1 Y 1 Ab SER 8 ? Q SER 8 217 1 Y 1 Ab GLY 9 ? Q GLY 9 218 1 Y 1 Ab TYR 10 ? Q TYR 10 219 1 Y 1 Ab GLU 11 ? Q GLU 11 220 1 Y 1 Ab VAL 12 ? Q VAL 12 221 1 Y 1 Ab VAL 40 ? Q VAL 40 222 1 Y 1 Ac ASP 1 ? R ASP 1 223 1 Y 1 Ac ALA 2 ? R ALA 2 224 1 Y 1 Ac GLU 3 ? R GLU 3 225 1 Y 1 Ac PHE 4 ? R PHE 4 226 1 Y 1 Ac ARG 5 ? R ARG 5 227 1 Y 1 Ac HIS 6 ? R HIS 6 228 1 Y 1 Ac ASN 7 ? R ASN 7 229 1 Y 1 Ac SER 8 ? R SER 8 230 1 Y 1 Ac GLY 9 ? R GLY 9 231 1 Y 1 Ac TYR 10 ? R TYR 10 232 1 Y 1 Ac GLU 11 ? R GLU 11 233 1 Y 1 Ac VAL 12 ? R VAL 12 234 1 Y 1 Ac VAL 40 ? R VAL 40 235 1 Y 1 Ad ASP 1 ? S ASP 1 236 1 Y 1 Ad ALA 2 ? S ALA 2 237 1 Y 1 Ad GLU 3 ? S GLU 3 238 1 Y 1 Ad PHE 4 ? S PHE 4 239 1 Y 1 Ad ARG 5 ? S ARG 5 240 1 Y 1 Ad HIS 6 ? S HIS 6 241 1 Y 1 Ad ASN 7 ? S ASN 7 242 1 Y 1 Ad SER 8 ? S SER 8 243 1 Y 1 Ad GLY 9 ? S GLY 9 244 1 Y 1 Ad TYR 10 ? S TYR 10 245 1 Y 1 Ad GLU 11 ? S GLU 11 246 1 Y 1 Ad VAL 12 ? S VAL 12 247 1 Y 1 Ad VAL 40 ? S VAL 40 248 1 Y 1 Ae ASP 1 ? T ASP 1 249 1 Y 1 Ae ALA 2 ? T ALA 2 250 1 Y 1 Ae GLU 3 ? T GLU 3 251 1 Y 1 Ae PHE 4 ? T PHE 4 252 1 Y 1 Ae ARG 5 ? T ARG 5 253 1 Y 1 Ae HIS 6 ? T HIS 6 254 1 Y 1 Ae ASN 7 ? T ASN 7 255 1 Y 1 Ae SER 8 ? T SER 8 256 1 Y 1 Ae GLY 9 ? T GLY 9 257 1 Y 1 Ae TYR 10 ? T TYR 10 258 1 Y 1 Ae GLU 11 ? T GLU 11 259 1 Y 1 Ae VAL 12 ? T VAL 12 260 1 Y 1 Ae VAL 40 ? T VAL 40 261 1 Y 1 Af ASP 1 ? U ASP 1 262 1 Y 1 Af ALA 2 ? U ALA 2 263 1 Y 1 Af GLU 3 ? U GLU 3 264 1 Y 1 Af PHE 4 ? U PHE 4 265 1 Y 1 Af ARG 5 ? U ARG 5 266 1 Y 1 Af HIS 6 ? U HIS 6 267 1 Y 1 Af ASN 7 ? U ASN 7 268 1 Y 1 Af SER 8 ? U SER 8 269 1 Y 1 Af GLY 9 ? U GLY 9 270 1 Y 1 Af TYR 10 ? U TYR 10 271 1 Y 1 Af GLU 11 ? U GLU 11 272 1 Y 1 Af VAL 12 ? U VAL 12 273 1 Y 1 Af VAL 40 ? U VAL 40 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 SER N N N N 256 SER CA C N S 257 SER C C N N 258 SER O O N N 259 SER CB C N N 260 SER OG O N N 261 SER OXT O N N 262 SER H H N N 263 SER H2 H N N 264 SER HA H N N 265 SER HB2 H N N 266 SER HB3 H N N 267 SER HG H N N 268 SER HXT H N N 269 TYR N N N N 270 TYR CA C N S 271 TYR C C N N 272 TYR O O N N 273 TYR CB C N N 274 TYR CG C Y N 275 TYR CD1 C Y N 276 TYR CD2 C Y N 277 TYR CE1 C Y N 278 TYR CE2 C Y N 279 TYR CZ C Y N 280 TYR OH O N N 281 TYR OXT O N N 282 TYR H H N N 283 TYR H2 H N N 284 TYR HA H N N 285 TYR HB2 H N N 286 TYR HB3 H N N 287 TYR HD1 H N N 288 TYR HD2 H N N 289 TYR HE1 H N N 290 TYR HE2 H N N 291 TYR HH H N N 292 TYR HXT H N N 293 VAL N N N N 294 VAL CA C N S 295 VAL C C N N 296 VAL O O N N 297 VAL CB C N N 298 VAL CG1 C N N 299 VAL CG2 C N N 300 VAL OXT O N N 301 VAL H H N N 302 VAL H2 H N N 303 VAL HA H N N 304 VAL HB H N N 305 VAL HG11 H N N 306 VAL HG12 H N N 307 VAL HG13 H N N 308 VAL HG21 H N N 309 VAL HG22 H N N 310 VAL HG23 H N N 311 VAL HXT H N N 312 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 SER N CA sing N N 245 SER N H sing N N 246 SER N H2 sing N N 247 SER CA C sing N N 248 SER CA CB sing N N 249 SER CA HA sing N N 250 SER C O doub N N 251 SER C OXT sing N N 252 SER CB OG sing N N 253 SER CB HB2 sing N N 254 SER CB HB3 sing N N 255 SER OG HG sing N N 256 SER OXT HXT sing N N 257 TYR N CA sing N N 258 TYR N H sing N N 259 TYR N H2 sing N N 260 TYR CA C sing N N 261 TYR CA CB sing N N 262 TYR CA HA sing N N 263 TYR C O doub N N 264 TYR C OXT sing N N 265 TYR CB CG sing N N 266 TYR CB HB2 sing N N 267 TYR CB HB3 sing N N 268 TYR CG CD1 doub Y N 269 TYR CG CD2 sing Y N 270 TYR CD1 CE1 sing Y N 271 TYR CD1 HD1 sing N N 272 TYR CD2 CE2 doub Y N 273 TYR CD2 HD2 sing N N 274 TYR CE1 CZ doub Y N 275 TYR CE1 HE1 sing N N 276 TYR CE2 CZ sing Y N 277 TYR CE2 HE2 sing N N 278 TYR CZ OH sing N N 279 TYR OH HH sing N N 280 TYR OXT HXT sing N N 281 VAL N CA sing N N 282 VAL N H sing N N 283 VAL N H2 sing N N 284 VAL CA C sing N N 285 VAL CA CB sing N N 286 VAL CA HA sing N N 287 VAL C O doub N N 288 VAL C OXT sing N N 289 VAL CB CG1 sing N N 290 VAL CB CG2 sing N N 291 VAL CB HB sing N N 292 VAL CG1 HG11 sing N N 293 VAL CG1 HG12 sing N N 294 VAL CG1 HG13 sing N N 295 VAL CG2 HG21 sing N N 296 VAL CG2 HG22 sing N N 297 VAL CG2 HG23 sing N N 298 VAL OXT HXT sing N N 299 # _em_admin.current_status REL _em_admin.deposition_date 2025-03-06 _em_admin.deposition_site PDBJ _em_admin.entry_id 9M5Q _em_admin.last_update 2025-07-23 _em_admin.map_release_date 2025-07-09 _em_admin.title 'V-shaped amyloid fiber (40) of Tottori (D7N) mutant (type 1)' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C1 _em_helical_entity.angular_rotation_per_subunit 179.32 _em_helical_entity.axial_rise_per_subunit 2.41488 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Ministry of Education, Culture, Sports, Science and Technology (Japan)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number JP24ama121005 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9M5Q _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ #