data_9M6A # _entry.id 9M6A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.417 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9M6A pdb_00009m6a 10.2210/pdb9m6a/pdb WWPDB D_1300057222 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-09-16 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9M6A _pdbx_database_status.recvd_initial_deposition_date 2025-03-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 3 _pdbx_contact_author.email huanglin36@mail.sysu.edu.cn _pdbx_contact_author.name_first Lin _pdbx_contact_author.name_last Huang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2121-365X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Li, M.' 1 ? 'Huang, L.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of xanthine/guanine RNA aptamer' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, M.' 1 ? primary 'Huang, L.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (42-MER)' 13470.997 2 ? ? ? ? 2 non-polymer syn "GUANOSINE-5'-TRIPHOSPHATE" 523.180 2 ? ? ? ? 3 non-polymer syn 'URIC ACID' 168.110 2 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 4 ? ? ? ? 5 water nat water 18.015 58 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GCGAUGGCACGUGUAUUACCCUAGUGGUCGACGUGCCAUCGC _entity_poly.pdbx_seq_one_letter_code_can GCGAUGGCACGUGUAUUACCCUAGUGGUCGACGUGCCAUCGC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-TRIPHOSPHATE" GTP 3 'URIC ACID' URC 4 'SODIUM ION' NA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 G n 1 4 A n 1 5 U n 1 6 G n 1 7 G n 1 8 C n 1 9 A n 1 10 C n 1 11 G n 1 12 U n 1 13 G n 1 14 U n 1 15 A n 1 16 U n 1 17 U n 1 18 A n 1 19 C n 1 20 C n 1 21 C n 1 22 U n 1 23 A n 1 24 G n 1 25 U n 1 26 G n 1 27 G n 1 28 U n 1 29 C n 1 30 G n 1 31 A n 1 32 C n 1 33 G n 1 34 U n 1 35 G n 1 36 C n 1 37 C n 1 38 A n 1 39 U n 1 40 C n 1 41 G n 1 42 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 42 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HOH non-polymer . WATER ? 'H2 O' 18.015 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 URC non-polymer . 'URIC ACID' '7,9-DIHYDRO-1H-PURINE-2,6,8(3H)-TRIONE' 'C5 H4 N4 O3' 168.110 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 -4 ? ? ? A . n A 1 2 C 2 -3 -3 C C A . n A 1 3 G 3 -2 -2 G G A . n A 1 4 A 4 -1 -1 A A A . n A 1 5 U 5 0 0 U U A . n A 1 6 G 6 1 1 G G A . n A 1 7 G 7 2 2 G G A . n A 1 8 C 8 3 3 C C A . n A 1 9 A 9 4 4 A A A . n A 1 10 C 10 5 5 C C A . n A 1 11 G 11 6 6 G G A . n A 1 12 U 12 7 7 U U A . n A 1 13 G 13 8 8 G G A . n A 1 14 U 14 9 9 U U A . n A 1 15 A 15 10 10 A A A . n A 1 16 U 16 11 11 U U A . n A 1 17 U 17 12 12 U U A . n A 1 18 A 18 13 13 A A A . n A 1 19 C 19 14 14 C C A . n A 1 20 C 20 15 15 C C A . n A 1 21 C 21 16 16 C C A . n A 1 22 U 22 17 17 U U A . n A 1 23 A 23 18 18 A A A . n A 1 24 G 24 19 19 G G A . n A 1 25 U 25 20 20 U U A . n A 1 26 G 26 21 21 G G A . n A 1 27 G 27 22 22 G G A . n A 1 28 U 28 23 23 U U A . n A 1 29 C 29 24 24 C C A . n A 1 30 G 30 25 25 G G A . n A 1 31 A 31 26 26 A A A . n A 1 32 C 32 27 27 C C A . n A 1 33 G 33 28 28 G G A . n A 1 34 U 34 29 29 U U A . n A 1 35 G 35 30 30 G G A . n A 1 36 C 36 31 31 C C A . n A 1 37 C 37 32 32 C C A . n A 1 38 A 38 33 33 A A A . n A 1 39 U 39 34 34 U U A . n A 1 40 C 40 35 35 C C A . n A 1 41 G 41 36 36 G G A . n A 1 42 C 42 37 37 C C A . n B 1 1 G 1 -4 ? ? ? B . n B 1 2 C 2 -3 -3 C C B . n B 1 3 G 3 -2 -2 G G B . n B 1 4 A 4 -1 -1 A A B . n B 1 5 U 5 0 0 U U B . n B 1 6 G 6 1 1 G G B . n B 1 7 G 7 2 2 G G B . n B 1 8 C 8 3 3 C C B . n B 1 9 A 9 4 4 A A B . n B 1 10 C 10 5 5 C C B . n B 1 11 G 11 6 6 G G B . n B 1 12 U 12 7 7 U U B . n B 1 13 G 13 8 8 G G B . n B 1 14 U 14 9 9 U U B . n B 1 15 A 15 10 10 A A B . n B 1 16 U 16 11 11 U U B . n B 1 17 U 17 12 12 U U B . n B 1 18 A 18 13 13 A A B . n B 1 19 C 19 14 14 C C B . n B 1 20 C 20 15 15 C C B . n B 1 21 C 21 16 16 C C B . n B 1 22 U 22 17 17 U U B . n B 1 23 A 23 18 18 A A B . n B 1 24 G 24 19 19 G G B . n B 1 25 U 25 20 20 U U B . n B 1 26 G 26 21 21 G G B . n B 1 27 G 27 22 22 G G B . n B 1 28 U 28 23 23 U U B . n B 1 29 C 29 24 24 C C B . n B 1 30 G 30 25 25 G G B . n B 1 31 A 31 26 26 A A B . n B 1 32 C 32 27 27 C C B . n B 1 33 G 33 28 28 G G B . n B 1 34 U 34 29 29 U U B . n B 1 35 G 35 30 30 G G B . n B 1 36 C 36 31 31 C C B . n B 1 37 C 37 32 32 C C B . n B 1 38 A 38 33 33 A A B . n B 1 39 U 39 34 34 U U B . n B 1 40 C 40 35 35 C C B . n B 1 41 G 41 36 36 G G B . n B 1 42 C 42 37 37 C C B . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id URC _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id URC _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GTP 1 101 -4 GTP GTP A . D 3 URC 1 102 101 URC URC A . E 4 NA 1 103 1 NA NA A . F 2 GTP 1 101 -4 GTP GTP B . G 3 URC 1 102 101 URC URC B . H 4 NA 1 103 2 NA NA B . I 4 NA 1 104 3 NA NA B . J 4 NA 1 105 4 NA NA B . K 5 HOH 1 201 20 HOH HOH A . K 5 HOH 2 202 60 HOH HOH A . K 5 HOH 3 203 88 HOH HOH A . K 5 HOH 4 204 201 HOH HOH A . K 5 HOH 5 205 17 HOH HOH A . K 5 HOH 6 206 189 HOH HOH A . K 5 HOH 7 207 200 HOH HOH A . K 5 HOH 8 208 56 HOH HOH A . K 5 HOH 9 209 14 HOH HOH A . K 5 HOH 10 210 218 HOH HOH A . K 5 HOH 11 211 76 HOH HOH A . K 5 HOH 12 212 15 HOH HOH A . K 5 HOH 13 213 81 HOH HOH A . K 5 HOH 14 214 6 HOH HOH A . K 5 HOH 15 215 107 HOH HOH A . K 5 HOH 16 216 181 HOH HOH A . K 5 HOH 17 217 228 HOH HOH A . K 5 HOH 18 218 29 HOH HOH A . K 5 HOH 19 219 193 HOH HOH A . K 5 HOH 20 220 75 HOH HOH A . K 5 HOH 21 221 227 HOH HOH A . K 5 HOH 22 222 161 HOH HOH A . K 5 HOH 23 223 70 HOH HOH A . K 5 HOH 24 224 190 HOH HOH A . K 5 HOH 25 225 111 HOH HOH A . K 5 HOH 26 226 214 HOH HOH A . K 5 HOH 27 227 149 HOH HOH A . L 5 HOH 1 201 175 HOH HOH B . L 5 HOH 2 202 65 HOH HOH B . L 5 HOH 3 203 3 HOH HOH B . L 5 HOH 4 204 42 HOH HOH B . L 5 HOH 5 205 28 HOH HOH B . L 5 HOH 6 206 199 HOH HOH B . L 5 HOH 7 207 8 HOH HOH B . L 5 HOH 8 208 89 HOH HOH B . L 5 HOH 9 209 24 HOH HOH B . L 5 HOH 10 210 147 HOH HOH B . L 5 HOH 11 211 40 HOH HOH B . L 5 HOH 12 212 141 HOH HOH B . L 5 HOH 13 213 7 HOH HOH B . L 5 HOH 14 214 145 HOH HOH B . L 5 HOH 15 215 79 HOH HOH B . L 5 HOH 16 216 94 HOH HOH B . L 5 HOH 17 217 173 HOH HOH B . L 5 HOH 18 218 66 HOH HOH B . L 5 HOH 19 219 104 HOH HOH B . L 5 HOH 20 220 1 HOH HOH B . L 5 HOH 21 221 185 HOH HOH B . L 5 HOH 22 222 231 HOH HOH B . L 5 HOH 23 223 211 HOH HOH B . L 5 HOH 24 224 123 HOH HOH B . L 5 HOH 25 225 143 HOH HOH B . L 5 HOH 26 226 226 HOH HOH B . L 5 HOH 27 227 2 HOH HOH B . L 5 HOH 28 228 203 HOH HOH B . L 5 HOH 29 229 118 HOH HOH B . L 5 HOH 30 230 156 HOH HOH B . L 5 HOH 31 231 221 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1-4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9M6A _cell.details ? _cell.formula_units_Z ? _cell.length_a 22.657 _cell.length_a_esd ? _cell.length_b 44.909 _cell.length_b_esd ? _cell.length_c 207.198 _cell.length_c_esd ? _cell.volume 210827.892 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9M6A _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9M6A _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.96 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.08 M Potassium chloride 0.02 M Magnesium chloride hexahydrate 52% v/v (+/-)-2-Methyl-2,4-pentanediol 0.012 M Spermine tetrahydrochloride ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-10-22 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL10U2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL10U2 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate 47.05 _reflns.entry_id 9M6A _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.52 _reflns.d_resolution_low 207.20 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7805 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.6 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.043 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.096 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.52 _reflns_shell.d_res_low 2.59 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 525 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.320 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.864 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.623 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 52.88 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9M6A _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.52 _refine.ls_d_res_low 51.80 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7699 _refine.ls_number_reflns_R_free 344 _refine.ls_number_reflns_R_work 7355 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.01 _refine.ls_percent_reflns_R_free 4.47 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2494 _refine.ls_R_factor_R_free 0.3030 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2470 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 35.3230 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.5028 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.52 _refine_hist.d_res_low 51.80 _refine_hist.number_atoms_solvent 58 _refine_hist.number_atoms_total 1890 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1740 _refine_hist.pdbx_number_atoms_ligand 92 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0020 ? 2034 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.7133 ? 3164 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0312 ? 418 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0037 ? 86 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 25.7997 ? 1246 ? f_dihedral_angle_d ? ? # _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.dom_id d_2 _refine_ls_restr_ncs.pdbx_ens_id ens_1 _refine_ls_restr_ncs.rms_dev_position 0.732365927809 _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_type 'Torsion NCS' _refine_ls_restr_ncs.pdbx_asym_id C _refine_ls_restr_ncs.pdbx_auth_asym_id A _refine_ls_restr_ncs.pdbx_number ? _refine_ls_restr_ncs.pdbx_rms ? _refine_ls_restr_ncs.pdbx_weight ? _refine_ls_restr_ncs.ncs_model_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.52 3.17 . . 172 3567 99.18 . . . . 0.3475 . . . . . . . . . . . . . . . 0.4535 'X-RAY DIFFRACTION' 3.18 51.80 . . 172 3788 98.85 . . . . 0.2104 . . . . . . . . . . . . . . . 0.2480 # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.matrix[1][1] -0.99990322707 _struct_ncs_oper.matrix[1][2] 0.00502352609545 _struct_ncs_oper.matrix[1][3] -0.0129730752518 _struct_ncs_oper.matrix[2][1] -0.00313993961749 _struct_ncs_oper.matrix[2][2] -0.989958007407 _struct_ncs_oper.matrix[2][3] -0.14132687059 _struct_ncs_oper.matrix[3][1] -0.0135527589487 _struct_ncs_oper.matrix[3][2] -0.141272459302 _struct_ncs_oper.matrix[3][3] 0.989877979838 _struct_ncs_oper.vector[1] 0.843597401607 _struct_ncs_oper.vector[2] 37.9792810143 _struct_ncs_oper.vector[3] -6.87126388245 _struct_ncs_oper.details ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details ens_1 d_1 ;chain "A" ; ens_1 d_2 ;chain "B" ; # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details ens_1 d_1 1 C GTP . . C GTP . . A GTP 101 A GTP 101 ? ? ens_1 d_1 2 A C 2 . A C 2 . A C -3 A C -3 ? ? ens_1 d_1 3 D URC . . D URC . . A URC 102 A URC 102 ? ? ens_1 d_2 1 F GTP . . F GTP . . B GTP 101 B GTP 101 ? ? ens_1 d_2 2 B C 2 . B C 2 . B C -3 B C -3 ? ? ens_1 d_2 3 G URC . . G URC . . B URC 102 B URC 102 ? ? # _struct_ncs_ens.id ens_1 _struct_ncs_ens.details ? # _struct_ncs_ens_gen.ens_id ens_1 _struct_ncs_ens_gen.dom_id_1 d_2 _struct_ncs_ens_gen.dom_id_2 d_1 _struct_ncs_ens_gen.oper_id 1 # _struct.entry_id 9M6A _struct.title 'Crystal structure of xanthine/guanine RNA aptamer (P1-12bp) with uric acid' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9M6A _struct_keywords.text 'xanthine/guanine RNA aptamer, uric acid, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 5 ? L N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9M6A _struct_ref.pdbx_db_accession 9M6A _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9M6A A 1 ? 42 ? 9M6A -4 ? 37 ? -4 37 2 1 9M6A B 1 ? 42 ? 9M6A -4 ? 37 ? -4 37 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 B,F,G,H,I,J,L 1 2 A,C,D,E,K # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_555 -x,y+1/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 22.4545000000 0.0000000000 0.0000000000 -1.0000000000 103.5990000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A C 2 P ? ? ? 1_555 C GTP . "O3'" ? ? A C -3 A GTP 101 1_555 ? ? ? ? ? ? ? 1.557 ? ? covale2 covale both ? B C 2 P ? ? ? 1_555 F GTP . "O3'" ? ? B C -3 B GTP 101 1_555 ? ? ? ? ? ? ? 1.558 ? ? metalc1 metalc ? ? A U 39 "O3'" ? ? ? 1_555 I NA . NA ? ? A U 34 B NA 104 1_645 ? ? ? ? ? ? ? 2.998 ? ? metalc2 metalc ? ? A C 40 OP1 ? ? ? 1_555 I NA . NA ? ? A C 35 B NA 104 1_645 ? ? ? ? ? ? ? 2.998 ? ? metalc3 metalc ? ? K HOH . O ? ? ? 3_555 H NA . NA ? ? A HOH 205 B NA 103 1_555 ? ? ? ? ? ? ? 2.664 ? ? metalc4 metalc ? ? B U 5 O2 ? ? ? 1_555 I NA . NA ? ? B U 0 B NA 104 1_555 ? ? ? ? ? ? ? 2.629 ? ? metalc5 metalc ? ? B U 39 O2 ? ? ? 1_555 I NA . NA ? ? B U 34 B NA 104 1_555 ? ? ? ? ? ? ? 3.081 ? ? metalc6 metalc ? ? H NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 103 B HOH 231 1_555 ? ? ? ? ? ? ? 3.143 ? ? metalc7 metalc ? ? I NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 104 B HOH 227 1_555 ? ? ? ? ? ? ? 1.928 ? ? metalc8 metalc ? ? J NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 105 B HOH 229 1_555 ? ? ? ? ? ? ? 2.201 ? ? hydrog1 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 41 N1 ? ? A C -3 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 41 O6 ? ? A C -3 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 41 N2 ? ? A C -3 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 40 N3 ? ? A G -2 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 40 O2 ? ? A G -2 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 40 N4 ? ? A G -2 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 4 N1 ? ? ? 1_555 A U 39 N3 ? ? A A -1 A U 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 4 N6 ? ? ? 1_555 A U 39 O4 ? ? A A -1 A U 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 38 N1 ? ? A U 0 A A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 38 N6 ? ? A U 0 A A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 37 N3 ? ? A G 1 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 37 O2 ? ? A G 1 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 37 N4 ? ? A G 1 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 36 N3 ? ? A G 2 A C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 36 O2 ? ? A G 2 A C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 36 N4 ? ? A G 2 A C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 35 N1 ? ? A C 3 A G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 35 O6 ? ? A C 3 A G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 35 N2 ? ? A C 3 A G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A A 9 N1 ? ? ? 1_555 A U 34 N3 ? ? A A 4 A U 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A A 9 N6 ? ? ? 1_555 A U 34 O4 ? ? A A 4 A U 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 10 N3 ? ? ? 1_555 A G 33 N1 ? ? A C 5 A G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 10 N4 ? ? ? 1_555 A G 33 O6 ? ? A C 5 A G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 10 O2 ? ? ? 1_555 A G 33 N2 ? ? A C 5 A G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 32 N3 ? ? A G 6 A C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 32 O2 ? ? A G 6 A C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 32 N4 ? ? A G 6 A C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A U 12 N3 ? ? ? 1_555 A A 31 N1 ? ? A U 7 A A 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A U 12 O4 ? ? ? 1_555 A A 31 N6 ? ? A U 7 A A 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 13 N1 ? ? ? 1_555 A G 30 O6 ? ? A G 8 A G 25 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog31 hydrog ? ? A G 13 O6 ? ? ? 1_555 A G 30 N1 ? ? A G 8 A G 25 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog32 hydrog ? ? A U 16 N3 ? ? ? 1_555 A A 18 N7 ? ? A U 11 A A 13 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog33 hydrog ? ? A U 16 O4 ? ? ? 1_555 A A 18 N6 ? ? A U 11 A A 13 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog34 hydrog ? ? A A 18 N1 ? ? ? 1_555 A U 28 N3 ? ? A A 13 A U 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A A 18 N6 ? ? ? 1_555 A U 28 O4 ? ? A A 13 A U 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 19 N3 ? ? ? 1_555 A G 27 N1 ? ? A C 14 A G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 19 N4 ? ? ? 1_555 A G 27 O6 ? ? A C 14 A G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 19 O2 ? ? ? 1_555 A G 27 N2 ? ? A C 14 A G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 20 N3 ? ? ? 1_555 A G 26 N1 ? ? A C 15 A G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 20 N4 ? ? ? 1_555 A G 26 O6 ? ? A C 15 A G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 20 O2 ? ? ? 1_555 A G 26 N2 ? ? A C 15 A G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 21 N3 ? ? ? 1_555 A G 24 N1 ? ? A C 16 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 21 N4 ? ? ? 1_555 A G 24 O6 ? ? A C 16 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 21 O2 ? ? ? 1_555 A G 24 N2 ? ? A C 16 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B C 2 N3 ? ? ? 1_555 B G 41 N1 ? ? B C -3 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B C 2 N4 ? ? ? 1_555 B G 41 O6 ? ? B C -3 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B C 2 O2 ? ? ? 1_555 B G 41 N2 ? ? B C -3 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B G 3 N1 ? ? ? 1_555 B C 40 N3 ? ? B G -2 B C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B G 3 N2 ? ? ? 1_555 B C 40 O2 ? ? B G -2 B C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B G 3 O6 ? ? ? 1_555 B C 40 N4 ? ? B G -2 B C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B A 4 N1 ? ? ? 1_555 B U 39 N3 ? ? B A -1 B U 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B A 4 N6 ? ? ? 1_555 B U 39 O4 ? ? B A -1 B U 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B U 5 N3 ? ? ? 1_555 B A 38 N1 ? ? B U 0 B A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B U 5 O4 ? ? ? 1_555 B A 38 N6 ? ? B U 0 B A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B G 6 N1 ? ? ? 1_555 B C 37 N3 ? ? B G 1 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B G 6 N2 ? ? ? 1_555 B C 37 O2 ? ? B G 1 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B G 6 O6 ? ? ? 1_555 B C 37 N4 ? ? B G 1 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B G 7 N1 ? ? ? 1_555 B C 36 N3 ? ? B G 2 B C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B G 7 N2 ? ? ? 1_555 B C 36 O2 ? ? B G 2 B C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B G 7 O6 ? ? ? 1_555 B C 36 N4 ? ? B G 2 B C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B C 8 N3 ? ? ? 1_555 B G 35 N1 ? ? B C 3 B G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B C 8 N4 ? ? ? 1_555 B G 35 O6 ? ? B C 3 B G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B C 8 O2 ? ? ? 1_555 B G 35 N2 ? ? B C 3 B G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B A 9 N1 ? ? ? 1_555 B U 34 N3 ? ? B A 4 B U 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B A 9 N6 ? ? ? 1_555 B U 34 O4 ? ? B A 4 B U 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B C 10 N3 ? ? ? 1_555 B G 33 N1 ? ? B C 5 B G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B C 10 N4 ? ? ? 1_555 B G 33 O6 ? ? B C 5 B G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B C 10 O2 ? ? ? 1_555 B G 33 N2 ? ? B C 5 B G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 32 N3 ? ? B G 6 B C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 32 O2 ? ? B G 6 B C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 32 N4 ? ? B G 6 B C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B U 12 N3 ? ? ? 1_555 B A 31 N1 ? ? B U 7 B A 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B U 12 O4 ? ? ? 1_555 B A 31 N6 ? ? B U 7 B A 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B G 13 N1 ? ? ? 1_555 B G 30 O6 ? ? B G 8 B G 25 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog75 hydrog ? ? B G 13 O6 ? ? ? 1_555 B G 30 N1 ? ? B G 8 B G 25 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog76 hydrog ? ? B U 16 N3 ? ? ? 1_555 B A 18 N7 ? ? B U 11 B A 13 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog77 hydrog ? ? B U 16 O4 ? ? ? 1_555 B A 18 N6 ? ? B U 11 B A 13 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog78 hydrog ? ? B A 18 N1 ? ? ? 1_555 B U 28 N3 ? ? B A 13 B U 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B A 18 N6 ? ? ? 1_555 B U 28 O4 ? ? B A 13 B U 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B C 19 N3 ? ? ? 1_555 B G 27 N1 ? ? B C 14 B G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B C 19 N4 ? ? ? 1_555 B G 27 O6 ? ? B C 14 B G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B C 19 O2 ? ? ? 1_555 B G 27 N2 ? ? B C 14 B G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B C 20 N3 ? ? ? 1_555 B G 26 N1 ? ? B C 15 B G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B C 20 N4 ? ? ? 1_555 B G 26 O6 ? ? B C 15 B G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B C 20 O2 ? ? ? 1_555 B G 26 N2 ? ? B C 15 B G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B C 21 N3 ? ? ? 1_555 B G 24 N1 ? ? B C 16 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? B C 21 N4 ? ? ? 1_555 B G 24 O6 ? ? B C 16 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? B C 21 O2 ? ? ? 1_555 B G 24 N2 ? ? B C 16 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O3'" ? A U 39 ? A U 34 ? 1_555 NA ? I NA . ? B NA 104 ? 1_645 OP1 ? A C 40 ? A C 35 ? 1_555 48.4 ? 2 "O3'" ? A U 39 ? A U 34 ? 1_555 NA ? I NA . ? B NA 104 ? 1_645 O2 ? B U 5 ? B U 0 ? 1_555 23.8 ? 3 OP1 ? A C 40 ? A C 35 ? 1_555 NA ? I NA . ? B NA 104 ? 1_645 O2 ? B U 5 ? B U 0 ? 1_555 45.2 ? 4 "O3'" ? A U 39 ? A U 34 ? 1_555 NA ? I NA . ? B NA 104 ? 1_645 O2 ? B U 39 ? B U 34 ? 1_555 25.3 ? 5 OP1 ? A C 40 ? A C 35 ? 1_555 NA ? I NA . ? B NA 104 ? 1_645 O2 ? B U 39 ? B U 34 ? 1_555 40.9 ? 6 O2 ? B U 5 ? B U 0 ? 1_555 NA ? I NA . ? B NA 104 ? 1_645 O2 ? B U 39 ? B U 34 ? 1_555 4.5 ? 7 "O3'" ? A U 39 ? A U 34 ? 1_555 NA ? I NA . ? B NA 104 ? 1_645 O ? L HOH . ? B HOH 227 ? 1_555 25.8 ? 8 OP1 ? A C 40 ? A C 35 ? 1_555 NA ? I NA . ? B NA 104 ? 1_645 O ? L HOH . ? B HOH 227 ? 1_555 44.1 ? 9 O2 ? B U 5 ? B U 0 ? 1_555 NA ? I NA . ? B NA 104 ? 1_645 O ? L HOH . ? B HOH 227 ? 1_555 2.4 ? 10 O2 ? B U 39 ? B U 34 ? 1_555 NA ? I NA . ? B NA 104 ? 1_645 O ? L HOH . ? B HOH 227 ? 1_555 3.3 ? 11 O ? K HOH . ? A HOH 205 ? 3_555 NA ? H NA . ? B NA 103 ? 1_555 O ? L HOH . ? B HOH 231 ? 1_555 68.7 ? # _pdbx_entry_details.entry_id 9M6A _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OP1 B C -3 ? ? "O3'" B GTP 101 ? ? 2.05 2 1 OP1 A C -3 ? ? "O3'" A GTP 101 ? ? 2.17 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 5.34802313457 0.865615579529 73.4905827146 0.875070043125 ? 0.0492136064031 ? -0.0831494846078 ? 0.622838446148 ? -0.126866445005 ? 0.442202195106 ? 2.05251946072 ? 0.0254651192755 ? -1.98504804666 ? 1.58036683739 ? -1.54578577462 ? 3.68231680776 ? 0.157137809211 ? 0.172878976514 ? 0.151656857084 ? 1.26562821704 ? 1.05006135284 ? 0.177462764083 ? -1.18163002359 ? 0.126187751512 ? -0.851359553529 ? 2 'X-RAY DIFFRACTION' ? refined 4.29065068181 1.24858658982 98.6066437574 0.453664319709 ? 0.101682273006 ? -0.00201394179112 ? 0.573586152701 ? 0.081658512623 ? 0.552564833955 ? 5.62840875644 ? -2.59014657163 ? 1.08673171943 ? 6.7996705935 ? 2.59372873921 ? 6.52873238857 ? 0.641327974586 ? -0.483271298144 ? 0.519827613653 ? 0.187399220949 ? -0.22125823087 ? -0.0239203186804 ? -0.495676846993 ? -1.00704317723 ? -0.417095815225 ? 3 'X-RAY DIFFRACTION' ? refined 4.12705469368 1.24658183308 82.2017856827 0.64596120564 ? 0.163538743825 ? 0.117323460499 ? 0.733231477519 ? 0.126908226748 ? 0.54241933528 ? 3.00130619645 ? 2.43283907581 ? -2.33373676169 ? 3.61053524606 ? -0.0253205783911 ? 3.45137478796 ? 0.324364589021 ? 0.159730890111 ? -0.0447598842888 ? -1.15222179158 ? 0.549958499237 ? 0.0160284988024 ? -0.681439347952 ? -0.875191317078 ? -0.647011127304 ? 4 'X-RAY DIFFRACTION' ? refined 7.65801755453 -2.91537678337 61.6657748409 0.580896732418 ? -0.138955253781 ? -0.0103341484613 ? 0.566723455701 ? -0.134993849454 ? 0.443247117925 ? 2.88800247492 ? -1.81047117127 ? -1.83944261109 ? 3.95382299552 ? 0.384749612425 ? 3.89516072851 ? 0.289401624045 ? -0.52089909408 ? 0.498437070233 ? -0.487243847685 ? 0.117245835178 ? -0.45350663917 ? -1.2541502606 ? 1.22336148538 ? -0.229152892455 ? 5 'X-RAY DIFFRACTION' ? refined -1.9096983035 31.4086496978 60.0126040299 0.483343146248 ? -0.113983865072 ? 0.0454443103097 ? 0.328051600749 ? -0.0861909116155 ? 0.440540585882 ? 3.71683674726 ? -0.280549803342 ? 0.0776980366414 ? 0.708154787424 ? -1.66167379807 ? 3.71136326675 ? 0.575695648933 ? 0.00479715394126 ? -0.4225077932 ? -0.0176609837752 ? -0.31388834726 ? 0.464391468033 ? 0.482608667541 ? 0.250897447105 ? -0.129570416767 ? 6 'X-RAY DIFFRACTION' ? refined -4.99940871963 20.5931869858 78.1107526797 0.407705265078 ? 0.0182213957625 ? 0.00399486867398 ? 0.399678846477 ? 0.0445555480529 ? 0.456221717924 ? 1.6108578855 ? -1.00114750445 ? 0.529030850489 ? 2.80725730621 ? -0.859207642877 ? 3.59254997975 ? 0.0187983871883 ? 0.196306352671 ? 0.326717396994 ? 0.0529531542275 ? 0.172130394256 ? -0.0454967519771 ? -0.552360053104 ? -0.0276846196713 ? -0.254633193718 ? 7 'X-RAY DIFFRACTION' ? refined -2.77977383271 30.1762311077 91.9879639226 0.442551065866 ? -0.0603788084188 ? 0.14002326207 ? 0.588880584801 ? -0.0828706583161 ? 0.884090416875 ? 5.29183454357 ? -0.782741351781 ? -5.38753372602 ? 8.49457210291 ? 1.3516714756 ? 6.53569052839 ? -0.0358650357867 ? -1.73933413587 ? 0.577532303413 ? 0.675242243754 ? 0.291114927039 ? -1.05416751337 ? 0.0820425322139 ? 1.9872249631 ? -0.46650287013 ? 8 'X-RAY DIFFRACTION' ? refined -8.38279502738 24.2056907083 87.8410253768 0.289118010771 ? 0.133535146802 ? 0.103015664643 ? 0.503785649443 ? -0.0335069058721 ? 0.559500333861 ? 3.09335588558 ? 1.16327128172 ? 1.4249101845 ? 5.47011745442 ? 0.693686466062 ? 2.27258882475 ? -0.640341583526 ? -0.21115881301 ? -0.56806647604 ? -0.619660027638 ? 0.375205876351 ? 0.283342175769 ? 0.0527362923449 ? -0.781554355901 ? 0.335427744724 ? 9 'X-RAY DIFFRACTION' ? refined -2.12298989111 21.3002954821 67.0717606156 0.515232336298 ? -0.0209487401684 ? -0.00217323813893 ? 0.613840062917 ? -0.0965705813008 ? 0.515293808107 ? 5.01330742672 ? -2.68488610668 ? -0.733202910251 ? 4.6317506552 ? -2.37764106459 ? 7.8742867336 ? 0.58315697164 ? 0.0434915125074 ? 0.646101037358 ? -1.14096356765 ? 0.0770698327408 ? -0.0510552701994 ? -0.0106276602433 ? 2.13263697216 ? -0.366872303388 ? 10 'X-RAY DIFFRACTION' ? refined -7.65930333768 32.0119602724 54.2081553082 0.545673856607 ? 0.0320276320249 ? 0.00482549926681 ? 0.442021802526 ? 0.0491920175119 ? 0.411378011462 ? 8.46019319877 ? 4.79739492436 ? -3.17515410099 ? 5.50122283991 ? -1.78403247446 ? 1.73758720543 ? -0.609042001409 ? 0.967705538231 ? -0.0427806664355 ? -1.41542727544 ? 0.280080327058 ? 0.283731248629 ? 1.0790099092 ? -0.537535152264 ? 0.378339514526 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 B ? A -3 ? B ? A 6 ? ? ;chain 'A' and (resid -3 through 6 ) ; 2 'X-RAY DIFFRACTION' 2 B ? A 7 ? B ? A 21 ? ? ;chain 'A' and (resid 7 through 21 ) ; 3 'X-RAY DIFFRACTION' 3 B ? A 22 ? B ? A 31 ? ? ;chain 'A' and (resid 22 through 31 ) ; 4 'X-RAY DIFFRACTION' 4 B ? A 32 ? B ? A 37 ? ? ;chain 'A' and (resid 32 through 37 ) ; 5 'X-RAY DIFFRACTION' 5 E ? B -3 ? E ? B 1 ? ? ;chain 'B' and (resid -3 through 1 ) ; 6 'X-RAY DIFFRACTION' 6 E ? B 2 ? E ? B 11 ? ? ;chain 'B' and (resid 2 through 11 ) ; 7 'X-RAY DIFFRACTION' 7 E ? B 12 ? E ? B 16 ? ? ;chain 'B' and (resid 12 through 16 ) ; 8 'X-RAY DIFFRACTION' 8 E ? B 17 ? E ? B 26 ? ? ;chain 'B' and (resid 17 through 26 ) ; 9 'X-RAY DIFFRACTION' 9 E ? B 27 ? E ? B 31 ? ? ;chain 'B' and (resid 27 through 31 ) ; 10 'X-RAY DIFFRACTION' 10 E ? B 32 ? E ? B 37 ? ? ;chain 'B' and (resid 32 through 37 ) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A G -4 ? A G 1 2 1 Y 1 B G -4 ? B G 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 GTP PG P N N 111 GTP O1G O N N 112 GTP O2G O N N 113 GTP O3G O N N 114 GTP O3B O N N 115 GTP PB P N N 116 GTP O1B O N N 117 GTP O2B O N N 118 GTP O3A O N N 119 GTP PA P N N 120 GTP O1A O N N 121 GTP O2A O N N 122 GTP "O5'" O N N 123 GTP "C5'" C N N 124 GTP "C4'" C N R 125 GTP "O4'" O N N 126 GTP "C3'" C N S 127 GTP "O3'" O N N 128 GTP "C2'" C N R 129 GTP "O2'" O N N 130 GTP "C1'" C N R 131 GTP N9 N Y N 132 GTP C8 C Y N 133 GTP N7 N Y N 134 GTP C5 C Y N 135 GTP C6 C N N 136 GTP O6 O N N 137 GTP N1 N N N 138 GTP C2 C N N 139 GTP N2 N N N 140 GTP N3 N N N 141 GTP C4 C Y N 142 GTP HOG2 H N N 143 GTP HOG3 H N N 144 GTP HOB2 H N N 145 GTP HOA2 H N N 146 GTP "H5'" H N N 147 GTP "H5''" H N N 148 GTP "H4'" H N N 149 GTP "H3'" H N N 150 GTP "HO3'" H N N 151 GTP "H2'" H N N 152 GTP "HO2'" H N N 153 GTP "H1'" H N N 154 GTP H8 H N N 155 GTP HN1 H N N 156 GTP HN21 H N N 157 GTP HN22 H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 NA NA NA N N 162 U OP3 O N N 163 U P P N N 164 U OP1 O N N 165 U OP2 O N N 166 U "O5'" O N N 167 U "C5'" C N N 168 U "C4'" C N R 169 U "O4'" O N N 170 U "C3'" C N S 171 U "O3'" O N N 172 U "C2'" C N R 173 U "O2'" O N N 174 U "C1'" C N R 175 U N1 N N N 176 U C2 C N N 177 U O2 O N N 178 U N3 N N N 179 U C4 C N N 180 U O4 O N N 181 U C5 C N N 182 U C6 C N N 183 U HOP3 H N N 184 U HOP2 H N N 185 U "H5'" H N N 186 U "H5''" H N N 187 U "H4'" H N N 188 U "H3'" H N N 189 U "HO3'" H N N 190 U "H2'" H N N 191 U "HO2'" H N N 192 U "H1'" H N N 193 U H3 H N N 194 U H5 H N N 195 U H6 H N N 196 URC N1 N Y N 197 URC C2 C Y N 198 URC C6 C Y N 199 URC N3 N Y N 200 URC O11 O N N 201 URC C4 C Y N 202 URC C5 C Y N 203 URC N9 N Y N 204 URC O13 O N N 205 URC N7 N Y N 206 URC C8 C Y N 207 URC O24 O N N 208 URC HN1 H N N 209 URC HN3 H N N 210 URC HN9 H N N 211 URC HN7 H N N 212 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 GTP PG O1G doub N N 116 GTP PG O2G sing N N 117 GTP PG O3G sing N N 118 GTP PG O3B sing N N 119 GTP O2G HOG2 sing N N 120 GTP O3G HOG3 sing N N 121 GTP O3B PB sing N N 122 GTP PB O1B doub N N 123 GTP PB O2B sing N N 124 GTP PB O3A sing N N 125 GTP O2B HOB2 sing N N 126 GTP O3A PA sing N N 127 GTP PA O1A doub N N 128 GTP PA O2A sing N N 129 GTP PA "O5'" sing N N 130 GTP O2A HOA2 sing N N 131 GTP "O5'" "C5'" sing N N 132 GTP "C5'" "C4'" sing N N 133 GTP "C5'" "H5'" sing N N 134 GTP "C5'" "H5''" sing N N 135 GTP "C4'" "O4'" sing N N 136 GTP "C4'" "C3'" sing N N 137 GTP "C4'" "H4'" sing N N 138 GTP "O4'" "C1'" sing N N 139 GTP "C3'" "O3'" sing N N 140 GTP "C3'" "C2'" sing N N 141 GTP "C3'" "H3'" sing N N 142 GTP "O3'" "HO3'" sing N N 143 GTP "C2'" "O2'" sing N N 144 GTP "C2'" "C1'" sing N N 145 GTP "C2'" "H2'" sing N N 146 GTP "O2'" "HO2'" sing N N 147 GTP "C1'" N9 sing N N 148 GTP "C1'" "H1'" sing N N 149 GTP N9 C8 sing Y N 150 GTP N9 C4 sing Y N 151 GTP C8 N7 doub Y N 152 GTP C8 H8 sing N N 153 GTP N7 C5 sing Y N 154 GTP C5 C6 sing N N 155 GTP C5 C4 doub Y N 156 GTP C6 O6 doub N N 157 GTP C6 N1 sing N N 158 GTP N1 C2 sing N N 159 GTP N1 HN1 sing N N 160 GTP C2 N2 sing N N 161 GTP C2 N3 doub N N 162 GTP N2 HN21 sing N N 163 GTP N2 HN22 sing N N 164 GTP N3 C4 sing N N 165 HOH O H1 sing N N 166 HOH O H2 sing N N 167 U OP3 P sing N N 168 U OP3 HOP3 sing N N 169 U P OP1 doub N N 170 U P OP2 sing N N 171 U P "O5'" sing N N 172 U OP2 HOP2 sing N N 173 U "O5'" "C5'" sing N N 174 U "C5'" "C4'" sing N N 175 U "C5'" "H5'" sing N N 176 U "C5'" "H5''" sing N N 177 U "C4'" "O4'" sing N N 178 U "C4'" "C3'" sing N N 179 U "C4'" "H4'" sing N N 180 U "O4'" "C1'" sing N N 181 U "C3'" "O3'" sing N N 182 U "C3'" "C2'" sing N N 183 U "C3'" "H3'" sing N N 184 U "O3'" "HO3'" sing N N 185 U "C2'" "O2'" sing N N 186 U "C2'" "C1'" sing N N 187 U "C2'" "H2'" sing N N 188 U "O2'" "HO2'" sing N N 189 U "C1'" N1 sing N N 190 U "C1'" "H1'" sing N N 191 U N1 C2 sing N N 192 U N1 C6 sing N N 193 U C2 O2 doub N N 194 U C2 N3 sing N N 195 U N3 C4 sing N N 196 U N3 H3 sing N N 197 U C4 O4 doub N N 198 U C4 C5 sing N N 199 U C5 C6 doub N N 200 U C5 H5 sing N N 201 U C6 H6 sing N N 202 URC N1 C2 sing Y N 203 URC N1 C6 sing Y N 204 URC N1 HN1 sing N N 205 URC C2 N3 sing Y N 206 URC C2 O11 doub N N 207 URC C6 C5 sing Y N 208 URC C6 O13 doub N N 209 URC N3 C4 sing Y N 210 URC N3 HN3 sing N N 211 URC C4 C5 doub Y N 212 URC C4 N9 sing Y N 213 URC C5 N7 sing Y N 214 URC N9 C8 sing Y N 215 URC N9 HN9 sing N N 216 URC N7 C8 sing Y N 217 URC N7 HN7 sing N N 218 URC C8 O24 doub N N 219 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9M6A 'double helix' 9M6A 'a-form double helix' 9M6A 'hairpin loop' 9M6A 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 2 1_555 A G 41 1_555 0.208 -0.159 -0.169 -1.175 -3.990 -0.384 1 A_C-3:G36_A A -3 ? A 36 ? 19 1 1 A G 3 1_555 A C 40 1_555 -0.225 -0.135 -0.122 -5.881 -8.810 2.457 2 A_G-2:C35_A A -2 ? A 35 ? 19 1 1 A A 4 1_555 A U 39 1_555 -0.071 -0.141 0.134 -2.785 -2.092 2.545 3 A_A-1:U34_A A -1 ? A 34 ? 20 1 1 A U 5 1_555 A A 38 1_555 -0.024 -0.180 0.367 2.282 -3.783 1.688 4 A_U0:A33_A A 0 ? A 33 ? 20 1 1 A G 6 1_555 A C 37 1_555 -0.239 -0.157 0.363 1.210 0.555 2.671 5 A_G1:C32_A A 1 ? A 32 ? 19 1 1 A G 7 1_555 A C 36 1_555 -0.184 -0.169 0.158 0.539 -2.006 0.602 6 A_G2:C31_A A 2 ? A 31 ? 19 1 1 A C 8 1_555 A G 35 1_555 0.227 -0.135 0.086 1.333 -4.281 2.377 7 A_C3:G30_A A 3 ? A 30 ? 19 1 1 A A 9 1_555 A U 34 1_555 -0.019 -0.123 0.085 -4.078 -4.272 2.872 8 A_A4:U29_A A 4 ? A 29 ? 20 1 1 A C 10 1_555 A G 33 1_555 0.237 -0.158 0.220 0.867 -3.245 0.996 9 A_C5:G28_A A 5 ? A 28 ? 19 1 1 A G 11 1_555 A C 32 1_555 -0.234 -0.136 -0.214 -5.788 -8.425 2.033 10 A_G6:C27_A A 6 ? A 27 ? 19 1 1 A U 12 1_555 A A 31 1_555 -0.008 -0.040 -0.168 3.550 -9.478 0.907 11 A_U7:A26_A A 7 ? A 26 ? 20 1 1 A G 13 1_555 A G 30 1_555 1.238 1.149 -0.050 -19.523 5.203 -174.029 12 A_G8:G25_A A 8 ? A 25 ? 3 2 1 A A 18 1_555 A U 28 1_555 0.116 -0.053 -0.093 -2.419 -2.168 1.968 13 A_A13:U23_A A 13 ? A 23 ? 20 1 1 A C 19 1_555 A G 27 1_555 0.207 -0.133 0.015 -0.465 -0.929 1.968 14 A_C14:G22_A A 14 ? A 22 ? 19 1 1 A C 20 1_555 A G 26 1_555 0.186 -0.138 0.139 0.066 1.021 1.432 15 A_C15:G21_A A 15 ? A 21 ? 19 1 1 A C 21 1_555 A G 24 1_555 0.198 -0.076 -0.010 1.223 1.866 2.906 16 A_C16:G19_A A 16 ? A 19 ? 19 1 1 B C 2 1_555 B G 41 1_555 0.155 -0.128 0.197 -0.252 -5.163 0.326 17 B_C-3:G36_B B -3 ? B 36 ? 19 1 1 B G 3 1_555 B C 40 1_555 -0.194 -0.172 0.214 -2.316 -4.066 -1.484 18 B_G-2:C35_B B -2 ? B 35 ? 19 1 1 B A 4 1_555 B U 39 1_555 0.056 -0.125 0.225 -0.604 -3.786 1.036 19 B_A-1:U34_B B -1 ? B 34 ? 20 1 1 B U 5 1_555 B A 38 1_555 -0.024 -0.107 0.252 0.052 -5.900 2.711 20 B_U0:A33_B B 0 ? B 33 ? 20 1 1 B G 6 1_555 B C 37 1_555 -0.193 -0.115 0.240 -1.346 2.787 1.693 21 B_G1:C32_B B 1 ? B 32 ? 19 1 1 B G 7 1_555 B C 36 1_555 -0.172 -0.121 0.259 0.975 -0.313 1.969 22 B_G2:C31_B B 2 ? B 31 ? 19 1 1 B C 8 1_555 B G 35 1_555 0.185 -0.123 0.191 2.114 -3.480 2.235 23 B_C3:G30_B B 3 ? B 30 ? 19 1 1 B A 9 1_555 B U 34 1_555 0.018 -0.094 0.119 -0.303 -3.289 1.924 24 B_A4:U29_B B 4 ? B 29 ? 20 1 1 B C 10 1_555 B G 33 1_555 0.197 -0.183 0.307 2.676 -5.162 0.769 25 B_C5:G28_B B 5 ? B 28 ? 19 1 1 B G 11 1_555 B C 32 1_555 -0.208 -0.147 0.173 0.403 -5.032 2.936 26 B_G6:C27_B B 6 ? B 27 ? 19 1 1 B U 12 1_555 B A 31 1_555 0.032 -0.080 -0.140 5.426 -8.990 1.459 27 B_U7:A26_B B 7 ? B 26 ? 20 1 1 B G 13 1_555 B G 30 1_555 1.248 1.011 -0.163 -20.771 4.610 -175.595 28 B_G8:G25_B B 8 ? B 25 ? 3 2 1 B A 18 1_555 B U 28 1_555 0.099 -0.084 -0.140 -2.665 -2.661 3.570 29 B_A13:U23_B B 13 ? B 23 ? 20 1 1 B C 19 1_555 B G 27 1_555 0.225 -0.132 -0.031 -1.635 -2.013 2.520 30 B_C14:G22_B B 14 ? B 22 ? 19 1 1 B C 20 1_555 B G 26 1_555 0.204 -0.130 0.030 -0.006 1.888 0.958 31 B_C15:G21_B B 15 ? B 21 ? 19 1 1 B C 21 1_555 B G 24 1_555 0.200 -0.116 0.025 3.075 0.109 1.685 32 B_C16:G19_B B 16 ? B 19 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 2 1_555 A G 41 1_555 A G 3 1_555 A C 40 1_555 0.370 -1.712 3.191 0.211 11.128 29.337 -5.026 -0.649 2.400 21.041 -0.399 31.334 1 AA_C-3G-2:C35G36_AA A -3 ? A 36 ? A -2 ? A 35 ? 1 A G 3 1_555 A C 40 1_555 A A 4 1_555 A U 39 1_555 -0.642 -1.229 3.012 -5.250 7.094 34.807 -2.909 0.365 2.781 11.628 8.606 35.875 2 AA_G-2A-1:U34C35_AA A -2 ? A 35 ? A -1 ? A 34 ? 1 A A 4 1_555 A U 39 1_555 A U 5 1_555 A A 38 1_555 -0.017 -1.202 3.070 -2.385 5.605 30.992 -3.153 -0.370 2.808 10.363 4.410 31.571 3 AA_A-1U0:A33U34_AA A -1 ? A 34 ? A 0 ? A 33 ? 1 A U 5 1_555 A A 38 1_555 A G 6 1_555 A C 37 1_555 0.340 -1.673 2.852 0.001 10.205 34.697 -3.854 -0.548 2.285 16.671 -0.002 36.122 4 AA_U0G1:C32A33_AA A 0 ? A 33 ? A 1 ? A 32 ? 1 A G 6 1_555 A C 37 1_555 A G 7 1_555 A C 36 1_555 -0.095 -1.786 3.102 1.374 4.014 30.365 -4.100 0.426 2.841 7.617 -2.607 30.653 5 AA_G1G2:C31C32_AA A 1 ? A 32 ? A 2 ? A 31 ? 1 A G 7 1_555 A C 36 1_555 A C 8 1_555 A G 35 1_555 0.235 -1.396 3.184 1.460 3.112 34.718 -2.780 -0.180 3.058 5.200 -2.439 34.883 6 AA_G2C3:G30C31_AA A 2 ? A 31 ? A 3 ? A 30 ? 1 A C 8 1_555 A G 35 1_555 A A 9 1_555 A U 34 1_555 -0.298 -1.574 2.979 -0.699 16.097 31.343 -4.537 0.410 1.968 27.628 1.200 35.149 7 AA_C3A4:U29G30_AA A 3 ? A 30 ? A 4 ? A 29 ? 1 A A 9 1_555 A U 34 1_555 A C 10 1_555 A G 33 1_555 0.159 -1.393 3.072 -1.262 3.908 32.855 -3.047 -0.474 2.884 6.875 2.220 33.103 8 AA_A4C5:G28U29_AA A 4 ? A 29 ? A 5 ? A 28 ? 1 A C 10 1_555 A G 33 1_555 A G 11 1_555 A C 32 1_555 0.211 -1.681 3.019 5.286 16.746 33.229 -4.407 0.236 1.986 27.062 -8.543 37.468 9 AA_C5G6:C27G28_AA A 5 ? A 28 ? A 6 ? A 27 ? 1 A G 11 1_555 A C 32 1_555 A U 12 1_555 A A 31 1_555 -0.099 -0.990 3.086 1.496 2.900 30.787 -2.376 0.455 2.974 5.443 -2.808 30.955 10 AA_G6U7:A26C27_AA A 6 ? A 27 ? A 7 ? A 26 ? 1 A U 12 1_555 A A 31 1_555 A G 13 1_555 A G 30 1_555 3.115 -0.945 -0.814 -89.360 -153.597 -50.700 0.340 1.635 0.329 77.367 -45.011 -177.921 11 AA_U7G8:G25A26_AA A 7 ? A 26 ? A 8 ? A 25 ? 1 A G 13 1_555 A G 30 1_555 A A 18 1_555 A U 28 1_555 -4.312 5.362 -0.860 -157.626 -21.839 -70.932 -2.860 -1.099 -3.367 11.514 -83.107 -163.036 12 AA_G8A13:U23G25_AA A 8 ? A 25 ? A 13 ? A 23 ? 1 A A 18 1_555 A U 28 1_555 A C 19 1_555 A G 27 1_555 0.202 -1.721 3.126 -0.686 3.065 33.423 -3.448 -0.454 2.956 5.315 1.189 33.566 13 AA_A13C14:G22U23_AA A 13 ? A 23 ? A 14 ? A 22 ? 1 A C 19 1_555 A G 27 1_555 A C 20 1_555 A G 26 1_555 -0.275 -1.831 3.100 -0.110 4.540 32.665 -3.929 0.467 2.827 8.023 0.195 32.971 14 AA_C14C15:G21G22_AA A 14 ? A 22 ? A 15 ? A 21 ? 1 A C 20 1_555 A G 26 1_555 A C 21 1_555 A G 24 1_555 -0.602 -1.768 3.190 2.830 3.457 20.417 -6.231 2.769 2.748 9.603 -7.864 20.895 15 AA_C15C16:G19G21_AA A 15 ? A 21 ? A 16 ? A 19 ? 1 B C 2 1_555 B G 41 1_555 B G 3 1_555 B C 40 1_555 -0.697 -1.650 2.963 -3.375 15.751 29.628 -4.907 0.764 1.931 28.320 6.069 33.638 16 BB_C-3G-2:C35G36_BB B -3 ? B 36 ? B -2 ? B 35 ? 1 B G 3 1_555 B C 40 1_555 B A 4 1_555 B U 39 1_555 0.036 -1.297 3.056 -1.649 5.040 34.923 -2.814 -0.281 2.842 8.339 2.728 35.311 17 BB_G-2A-1:U34C35_BB B -2 ? B 35 ? B -1 ? B 34 ? 1 B A 4 1_555 B U 39 1_555 B U 5 1_555 B A 38 1_555 0.300 -1.494 3.175 -0.193 4.102 31.013 -3.502 -0.590 2.956 7.629 0.360 31.278 18 BB_A-1U0:A33U34_BB B -1 ? B 34 ? B 0 ? B 33 ? 1 B U 5 1_555 B A 38 1_555 B G 6 1_555 B C 37 1_555 -0.007 -1.813 2.889 -0.536 11.274 32.334 -4.497 -0.055 2.155 19.518 0.928 34.197 19 BB_U0G1:C32A33_BB B 0 ? B 33 ? B 1 ? B 32 ? 1 B G 6 1_555 B C 37 1_555 B G 7 1_555 B C 36 1_555 0.421 -1.873 3.005 0.763 7.179 28.740 -4.957 -0.686 2.484 14.182 -1.507 29.614 20 BB_G1G2:C31C32_BB B 1 ? B 32 ? B 2 ? B 31 ? 1 B G 7 1_555 B C 36 1_555 B C 8 1_555 B G 35 1_555 0.061 -1.598 3.158 1.659 2.419 34.088 -3.078 0.144 3.040 4.117 -2.824 34.211 21 BB_G2C3:G30C31_BB B 2 ? B 31 ? B 3 ? B 30 ? 1 B C 8 1_555 B G 35 1_555 B A 9 1_555 B U 34 1_555 -0.553 -1.654 2.911 -0.541 14.548 29.630 -4.851 0.904 1.920 26.526 0.986 32.941 22 BB_C3A4:U29G30_BB B 3 ? B 30 ? B 4 ? B 29 ? 1 B A 9 1_555 B U 34 1_555 B C 10 1_555 B G 33 1_555 0.142 -1.401 3.098 -1.868 4.007 33.672 -2.990 -0.519 2.905 6.880 3.208 33.953 23 BB_A4C5:G28U29_BB B 4 ? B 29 ? B 5 ? B 28 ? 1 B C 10 1_555 B G 33 1_555 B G 11 1_555 B C 32 1_555 0.228 -1.752 2.877 2.439 10.293 32.488 -4.298 -0.078 2.244 17.817 -4.222 34.123 24 BB_C5G6:C27G28_BB B 5 ? B 28 ? B 6 ? B 27 ? 1 B G 11 1_555 B C 32 1_555 B U 12 1_555 B A 31 1_555 -0.094 -1.179 3.101 4.715 3.505 31.959 -2.677 0.935 2.915 6.298 -8.474 32.480 25 BB_G6U7:A26C27_BB B 6 ? B 27 ? B 7 ? B 26 ? 1 B U 12 1_555 B A 31 1_555 B G 13 1_555 B G 30 1_555 3.088 -0.970 -1.057 -88.819 -151.971 -40.465 0.260 1.676 0.311 77.108 -45.066 -176.268 26 BB_U7G8:G25A26_BB B 7 ? B 26 ? B 8 ? B 25 ? 1 B G 13 1_555 B G 30 1_555 B A 18 1_555 B U 28 1_555 -4.246 5.353 -1.112 -157.418 -20.635 -68.560 -2.868 -0.932 -3.521 10.914 -83.260 -162.486 27 BB_G8A13:U23G25_BB B 8 ? B 25 ? B 13 ? B 23 ? 1 B A 18 1_555 B U 28 1_555 B C 19 1_555 B G 27 1_555 0.069 -1.730 3.110 -0.833 4.209 34.125 -3.530 -0.237 2.880 7.136 1.412 34.386 28 BB_A13C14:G22U23_BB B 13 ? B 23 ? B 14 ? B 22 ? 1 B C 19 1_555 B G 27 1_555 B C 20 1_555 B G 26 1_555 -0.474 -1.808 3.020 0.034 5.201 32.359 -3.993 0.846 2.704 9.258 -0.061 32.763 29 BB_C14C15:G21G22_BB B 14 ? B 22 ? B 15 ? B 21 ? 1 B C 20 1_555 B G 26 1_555 B C 21 1_555 B G 24 1_555 -0.857 -1.769 3.147 1.627 4.501 20.092 -6.693 3.026 2.614 12.670 -4.581 20.649 30 BB_C15C16:G19G21_BB B 15 ? B 21 ? B 16 ? B 19 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 32171191 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details 'XBA12-XAN structure' # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 # _atom_sites.entry_id 9M6A _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.044136 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022267 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004826 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? NA ? ? 9.38062 1.54875 ? ? 3.38349 72.32734 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? NA1+ ? ? 9.95753 ? ? ? 4.19129 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O1- ? ? 5.12366 3.84317 ? ? 3.49406 27.47979 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #