HEADER BIOSYNTHETIC PROTEIN 10-MAR-25 9M7D TITLE CRYSTAL STRUCTURE OF ASDMS D333N MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: HALOACID DEHALOGENASE SUPERFAMILY, SUBFAMILY IA, VARIANT 3 COMPND 3 WITH THIRD MOTIF HAVING DD OR ED; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: INITIAL 'GSH' IS FROM THE AMINO ACID RESIDUES IN THE COMPND 8 THROMBIN RECOGNITION SITE. DELETION: M1-V18 ENGINEERING MUTATION: COMPND 9 D333N SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUIMARINA SPONGIAE; SOURCE 3 ORGANISM_TAXID: 570521; SOURCE 4 GENE: SAMN04488508_102320; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TERPENE CYCLASE, HALOACID DEHALOGENASE, PHOSPHATASE, BIOSYNTHESIS, KEYWDS 2 BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.FUJIYAMA,N.N.Q.VO,S.TAKAHASHI REVDAT 1 10-SEP-25 9M7D 0 JRNL AUTH K.FUJIYAMA,H.TAKAGI,N.N.Q.VO,N.MORITA,T.NOGAWA,S.TAKAHASHI JRNL TITL STRUCTURAL INSIGHTS INTO A BACTERIAL TERPENE CYCLASE FUSED JRNL TITL 2 WITH HALOACID DEHALOGENASE-LIKE PHOSPHATASE. JRNL REF CHEM SCI V. 16 15310 2025 JRNL REFN ISSN 2041-6520 JRNL PMID 40852458 JRNL DOI 10.1039/D5SC04719F REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0403 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.349 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 87306 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.028 REMARK 3 FREE R VALUE TEST SET COUNT : 4390 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2708 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2711 REMARK 3 BIN FREE R VALUE SET COUNT : 135 REMARK 3 BIN FREE R VALUE : 0.3212 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8400 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 148 REMARK 3 SOLVENT ATOMS : 357 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.285 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.11 REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9M7D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-MAR-25. REMARK 100 THE DEPOSITION ID IS D_1300057316. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION JAN 10, 2022 REMARK 200 BUILT=20220120 REMARK 200 DATA SCALING SOFTWARE : XDS VERSION JAN 10, 2022 REMARK 200 BUILT=20220120, POINTLESS REMARK 200 1.12.10, AIMLESS 0.7.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 87319 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 47.182 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.610 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: ALPHAFOLD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.72 M AMMONIUM SULFATE, 0.095 M MES REMARK 280 -NAOH PH6.5, 0.005 M MES-NAOH PH7.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 202.59150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 48.51600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 48.51600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 303.88725 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 48.51600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 48.51600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 101.29575 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 48.51600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.51600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 303.88725 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 48.51600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.51600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 101.29575 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 202.59150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -364.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 232 REMARK 465 GLN A 233 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 LEU B 19 REMARK 465 VAL B 54 REMARK 465 HIS B 55 REMARK 465 ILE B 230 REMARK 465 PRO B 231 REMARK 465 LEU B 232 REMARK 465 GLN B 233 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3 SO4 A 614 O HOH A 701 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 255 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 46 26.67 47.15 REMARK 500 VAL A 47 -54.50 -122.78 REMARK 500 THR A 57 -168.93 -121.42 REMARK 500 LYS A 130 9.28 -67.02 REMARK 500 PHE A 276 -74.23 -106.98 REMARK 500 ASN A 346 33.19 71.06 REMARK 500 ASP A 375 111.55 -166.78 REMARK 500 ASN A 486 77.66 -102.45 REMARK 500 ASP B 46 -41.14 55.15 REMARK 500 PHE B 276 -71.14 -117.81 REMARK 500 ASP B 375 107.93 -175.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 894 DISTANCE = 6.40 ANGSTROMS DBREF1 9M7D A 19 536 UNP A0A1M6CXF0_9FLAO DBREF2 9M7D A A0A1M6CXF0 5 522 DBREF1 9M7D B 19 536 UNP A0A1M6CXF0_9FLAO DBREF2 9M7D B A0A1M6CXF0 5 522 SEQADV 9M7D GLY A -2 UNP A0A1M6CXF EXPRESSION TAG SEQADV 9M7D SER A -1 UNP A0A1M6CXF EXPRESSION TAG SEQADV 9M7D HIS A 0 UNP A0A1M6CXF EXPRESSION TAG SEQADV 9M7D ASN A 333 UNP A0A1M6CXF ASP 319 ENGINEERED MUTATION SEQADV 9M7D GLY B -2 UNP A0A1M6CXF EXPRESSION TAG SEQADV 9M7D SER B -1 UNP A0A1M6CXF EXPRESSION TAG SEQADV 9M7D HIS B 0 UNP A0A1M6CXF EXPRESSION TAG SEQADV 9M7D ASN B 333 UNP A0A1M6CXF ASP 319 ENGINEERED MUTATION SEQRES 1 A 521 GLY SER HIS LEU THR PRO GLU LEU ILE THR SER LEU GLN SEQRES 2 A 521 GLU LEU SER GLN ILE LEU ASP ARG TYR ASP THR ILE VAL SEQRES 3 A 521 PHE ASP LEU GLY ASP VAL LEU LEU HIS TRP ASP SER VAL SEQRES 4 A 521 HIS PHE THR SER GLU THR LYS GLY ILE ASP ASP VAL ARG SEQRES 5 A 521 LYS MET VAL LYS HIS PRO VAL TRP GLN ASP LEU GLU LYS SEQRES 6 A 521 GLY LEU ILE ASN GLN GLU PHE ALA LEU THR ALA LEU SER SEQRES 7 A 521 CYS GLU LEU GLU THR PRO CYS SER LYS LEU LYS GLU MET SEQRES 8 A 521 LEU GLU LEU SER ILE ALA SER LEU GLN VAL ASN PRO LEU SEQRES 9 A 521 MET VAL GLU VAL LEU ARG VAL LEU HIS LYS LYS ASP LYS SEQRES 10 A 521 GLN ILE TYR CYS LEU SER ASN VAL ASP LEU GLU SER PHE SEQRES 11 A 521 SER TYR LEU TYR LYS GLN PHE ASP PHE TRP LYS TYR PHE SEQRES 12 A 521 ASP GLY ILE TYR VAL SER ALA LEU LEU GLN LEU ARG LYS SEQRES 13 A 521 PRO ASN PRO ASP ILE PHE GLN TYR LEU ILE SER SER ALA SEQRES 14 A 521 SER ILE ASN THR LYS SER THR ILE PHE ILE ASP ASP LYS SEQRES 15 A 521 SER GLU ASN LEU GLN GLU ALA ALA ASN PHE GLY ILE SER SEQRES 16 A 521 THR LEU LYS TYR ASN LYS ASP ASN PHE GLU TYR THR ALA SEQRES 17 A 521 ILE GLU GLY GLY TRP PRO ILE PRO LEU GLN ASN MET THR SEQRES 18 A 521 PRO GLU ILE HIS LYS LYS ARG THR LEU GLY GLU ASP TYR SEQRES 19 A 521 LEU ASN LEU ARG LEU ARG LYS PHE PRO PHE CYS LYS SER SEQRES 20 A 521 PHE VAL SER ASN ASN VAL GLU LEU ILE GLY GLY GLU ASP SEQRES 21 A 521 PHE SER LYS GLU ILE PHE SER THR ALA VAL ILE LEU HIS SEQRES 22 A 521 SER TYR THR SER LEU PRO ASP ASP ILE ILE ALA SER MET SEQRES 23 A 521 CYS HIS GLU ILE LEU ASN HIS ASP GLY GLN ASN LYS LEU SEQRES 24 A 521 ARG TRP CYS PHE TYR LYS ASN GLU ALA ARG PRO ASP ASN SEQRES 25 A 521 PHE PRO ASP ASP LEU ASN THR THR SER MET VAL LEU SER SEQRES 26 A 521 PHE LEU LEU ASN HIS ASN LYS LEU THR ILE GLU LYS ILE SEQRES 27 A 521 ILE PRO VAL ALA GLU GLN MET ILE ALA ASN ARG ASN GLU SEQRES 28 A 521 GLU GLY ILE ILE GLN VAL TYR PHE ASP ASP ASN ARG PRO SEQRES 29 A 521 ARG ILE ASP ALA ILE VAL ALA ILE ASN VAL LEU TYR LEU SEQRES 30 A 521 MET HIS GLN ILE GLY TYR GLY GLU ARG LYS GLU LEU LYS SEQRES 31 A 521 GLU THR GLU ALA PHE VAL PHE ASP PHE LEU ILE SER LYS SEQRES 32 A 521 GLU TYR LEU LYS GLY THR ARG TYR TYR PRO ALA PRO ASP SEQRES 33 A 521 VAL PHE LEU PHE PHE LEU SER ARG LEU VAL VAL ASP PHE SEQRES 34 A 521 PRO ASP GLN PHE GLU LYS PHE HIS LYS PRO LEU THR GLU SEQRES 35 A 521 MET LEU ILE THR ARG VAL ASN CYS SER THR PHE PRO LEU SEQRES 36 A 521 GLU ARG ALA LEU ARG ILE ILE ALA LEU LYS LYS LEU GLY SEQRES 37 A 521 ILE VAL ASN ARG VAL ASP PHE LEU LYS LEU LEU ASP THR SEQRES 38 A 521 GLN LEU ALA ASP GLY GLY TRP PRO VAL TYR GLY LEU PHE SEQRES 39 A 521 ILE ALA PRO ARG SER ASN THR TYR PHE GLY SER ARG GLU SEQRES 40 A 521 LEU SER THR ALA PHE ALA LEU GLU ALA LEU HIS ILE LEU SEQRES 41 A 521 SER SEQRES 1 B 521 GLY SER HIS LEU THR PRO GLU LEU ILE THR SER LEU GLN SEQRES 2 B 521 GLU LEU SER GLN ILE LEU ASP ARG TYR ASP THR ILE VAL SEQRES 3 B 521 PHE ASP LEU GLY ASP VAL LEU LEU HIS TRP ASP SER VAL SEQRES 4 B 521 HIS PHE THR SER GLU THR LYS GLY ILE ASP ASP VAL ARG SEQRES 5 B 521 LYS MET VAL LYS HIS PRO VAL TRP GLN ASP LEU GLU LYS SEQRES 6 B 521 GLY LEU ILE ASN GLN GLU PHE ALA LEU THR ALA LEU SER SEQRES 7 B 521 CYS GLU LEU GLU THR PRO CYS SER LYS LEU LYS GLU MET SEQRES 8 B 521 LEU GLU LEU SER ILE ALA SER LEU GLN VAL ASN PRO LEU SEQRES 9 B 521 MET VAL GLU VAL LEU ARG VAL LEU HIS LYS LYS ASP LYS SEQRES 10 B 521 GLN ILE TYR CYS LEU SER ASN VAL ASP LEU GLU SER PHE SEQRES 11 B 521 SER TYR LEU TYR LYS GLN PHE ASP PHE TRP LYS TYR PHE SEQRES 12 B 521 ASP GLY ILE TYR VAL SER ALA LEU LEU GLN LEU ARG LYS SEQRES 13 B 521 PRO ASN PRO ASP ILE PHE GLN TYR LEU ILE SER SER ALA SEQRES 14 B 521 SER ILE ASN THR LYS SER THR ILE PHE ILE ASP ASP LYS SEQRES 15 B 521 SER GLU ASN LEU GLN GLU ALA ALA ASN PHE GLY ILE SER SEQRES 16 B 521 THR LEU LYS TYR ASN LYS ASP ASN PHE GLU TYR THR ALA SEQRES 17 B 521 ILE GLU GLY GLY TRP PRO ILE PRO LEU GLN ASN MET THR SEQRES 18 B 521 PRO GLU ILE HIS LYS LYS ARG THR LEU GLY GLU ASP TYR SEQRES 19 B 521 LEU ASN LEU ARG LEU ARG LYS PHE PRO PHE CYS LYS SER SEQRES 20 B 521 PHE VAL SER ASN ASN VAL GLU LEU ILE GLY GLY GLU ASP SEQRES 21 B 521 PHE SER LYS GLU ILE PHE SER THR ALA VAL ILE LEU HIS SEQRES 22 B 521 SER TYR THR SER LEU PRO ASP ASP ILE ILE ALA SER MET SEQRES 23 B 521 CYS HIS GLU ILE LEU ASN HIS ASP GLY GLN ASN LYS LEU SEQRES 24 B 521 ARG TRP CYS PHE TYR LYS ASN GLU ALA ARG PRO ASP ASN SEQRES 25 B 521 PHE PRO ASP ASP LEU ASN THR THR SER MET VAL LEU SER SEQRES 26 B 521 PHE LEU LEU ASN HIS ASN LYS LEU THR ILE GLU LYS ILE SEQRES 27 B 521 ILE PRO VAL ALA GLU GLN MET ILE ALA ASN ARG ASN GLU SEQRES 28 B 521 GLU GLY ILE ILE GLN VAL TYR PHE ASP ASP ASN ARG PRO SEQRES 29 B 521 ARG ILE ASP ALA ILE VAL ALA ILE ASN VAL LEU TYR LEU SEQRES 30 B 521 MET HIS GLN ILE GLY TYR GLY GLU ARG LYS GLU LEU LYS SEQRES 31 B 521 GLU THR GLU ALA PHE VAL PHE ASP PHE LEU ILE SER LYS SEQRES 32 B 521 GLU TYR LEU LYS GLY THR ARG TYR TYR PRO ALA PRO ASP SEQRES 33 B 521 VAL PHE LEU PHE PHE LEU SER ARG LEU VAL VAL ASP PHE SEQRES 34 B 521 PRO ASP GLN PHE GLU LYS PHE HIS LYS PRO LEU THR GLU SEQRES 35 B 521 MET LEU ILE THR ARG VAL ASN CYS SER THR PHE PRO LEU SEQRES 36 B 521 GLU ARG ALA LEU ARG ILE ILE ALA LEU LYS LYS LEU GLY SEQRES 37 B 521 ILE VAL ASN ARG VAL ASP PHE LEU LYS LEU LEU ASP THR SEQRES 38 B 521 GLN LEU ALA ASP GLY GLY TRP PRO VAL TYR GLY LEU PHE SEQRES 39 B 521 ILE ALA PRO ARG SER ASN THR TYR PHE GLY SER ARG GLU SEQRES 40 B 521 LEU SER THR ALA PHE ALA LEU GLU ALA LEU HIS ILE LEU SEQRES 41 B 521 SER HET UNL A 601 49 HET CL A 602 1 HET CL A 603 1 HET CL A 604 1 HET CL A 605 1 HET CL A 606 1 HET CL A 607 1 HET CL A 608 1 HET CL A 609 1 HET SO4 A 610 5 HET SO4 A 611 5 HET SO4 A 612 5 HET SO4 A 613 5 HET SO4 A 614 5 HET SO4 A 615 5 HET SO4 A 616 5 HET SO4 A 617 5 HET SO4 A 618 5 HET SO4 A 619 5 HET UNL B 601 49 HET CL B 602 1 HET CL B 603 1 HET CL B 604 1 HET CL B 605 1 HET CL B 606 1 HET CL B 607 1 HET CL B 608 1 HET SO4 B 609 5 HET SO4 B 610 5 HET SO4 B 611 5 HET SO4 B 612 5 HET SO4 B 613 5 HET SO4 B 614 5 HET SO4 B 615 5 HETNAM UNL UNKNOWN LIGAND HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION FORMUL 4 CL 15(CL 1-) FORMUL 12 SO4 17(O4 S 2-) FORMUL 37 HOH *357(H2 O) HELIX 1 AA1 SER A 26 ARG A 36 1 11 HELIX 2 AA2 VAL A 66 LYS A 71 1 6 HELIX 3 AA3 HIS A 72 LYS A 80 1 9 HELIX 4 AA4 ASN A 84 LEU A 96 1 13 HELIX 5 AA5 PRO A 99 SER A 113 1 15 HELIX 6 AA6 ASN A 117 LYS A 130 1 14 HELIX 7 AA7 ASP A 141 PHE A 152 1 12 HELIX 8 AA8 PHE A 154 PHE A 158 5 5 HELIX 9 AA9 SER A 164 GLN A 168 1 5 HELIX 10 AB1 ASN A 173 ALA A 184 1 12 HELIX 11 AB2 ASN A 187 LYS A 189 5 3 HELIX 12 AB3 LYS A 197 ASN A 206 1 10 HELIX 13 AB4 MET A 235 PHE A 257 1 23 HELIX 14 AB5 ILE A 280 TYR A 290 1 11 HELIX 15 AB6 PRO A 294 ASN A 307 1 14 HELIX 16 AB7 LYS A 320 ARG A 324 5 5 HELIX 17 AB8 ASP A 331 HIS A 345 1 15 HELIX 18 AB9 THR A 349 ALA A 362 1 14 HELIX 19 AC1 ASP A 382 ILE A 396 1 15 HELIX 20 AC2 ARG A 401 GLU A 403 5 3 HELIX 21 AC3 LEU A 404 SER A 417 1 14 HELIX 22 AC4 LYS A 418 GLY A 423 5 6 HELIX 23 AC5 ALA A 429 PHE A 444 1 16 HELIX 24 AC6 PRO A 445 GLN A 447 5 3 HELIX 25 AC7 PHE A 448 ARG A 462 1 15 HELIX 26 AC8 PHE A 468 LEU A 482 1 15 HELIX 27 AC9 ASN A 486 ASP A 495 1 10 HELIX 28 AD1 SER A 520 LEU A 535 1 16 HELIX 29 AD2 SER B 26 ARG B 36 1 11 HELIX 30 AD3 VAL B 66 HIS B 72 1 7 HELIX 31 AD4 HIS B 72 LYS B 80 1 9 HELIX 32 AD5 ASN B 84 LEU B 96 1 13 HELIX 33 AD6 PRO B 99 SER B 113 1 15 HELIX 34 AD7 ASN B 117 LYS B 130 1 14 HELIX 35 AD8 ASP B 141 PHE B 152 1 12 HELIX 36 AD9 PHE B 154 PHE B 158 5 5 HELIX 37 AE1 SER B 164 GLN B 168 1 5 HELIX 38 AE2 ASN B 173 SER B 185 1 13 HELIX 39 AE3 ASN B 187 LYS B 189 5 3 HELIX 40 AE4 LYS B 197 PHE B 207 1 11 HELIX 41 AE5 MET B 235 PHE B 257 1 23 HELIX 42 AE6 ILE B 280 TYR B 290 1 11 HELIX 43 AE7 PRO B 294 HIS B 308 1 15 HELIX 44 AE8 LYS B 320 ARG B 324 5 5 HELIX 45 AE9 ASP B 331 HIS B 345 1 15 HELIX 46 AF1 THR B 349 ALA B 362 1 14 HELIX 47 AF2 ASP B 382 ILE B 396 1 15 HELIX 48 AF3 ARG B 401 GLU B 403 5 3 HELIX 49 AF4 LEU B 404 SER B 417 1 14 HELIX 50 AF5 LYS B 418 GLY B 423 5 6 HELIX 51 AF6 ALA B 429 PHE B 444 1 16 HELIX 52 AF7 PHE B 448 LYS B 450 5 3 HELIX 53 AF8 PHE B 451 ARG B 462 1 12 HELIX 54 AF9 PHE B 468 LEU B 482 1 15 HELIX 55 AG1 ASN B 486 ASP B 495 1 10 HELIX 56 AG2 ARG B 521 LEU B 535 1 15 SHEET 1 AA1 7 GLU A 22 ILE A 24 0 SHEET 2 AA1 7 PHE A 219 THR A 222 -1 O PHE A 219 N ILE A 24 SHEET 3 AA1 7 SER A 210 TYR A 214 -1 N LYS A 213 O GLU A 220 SHEET 4 AA1 7 THR A 191 ASP A 195 1 N THR A 191 O SER A 210 SHEET 5 AA1 7 THR A 39 PHE A 42 1 N VAL A 41 O ILE A 194 SHEET 6 AA1 7 GLN A 133 SER A 138 1 O TYR A 135 N PHE A 42 SHEET 7 AA1 7 GLY A 160 VAL A 163 1 O TYR A 162 N CYS A 136 SHEET 1 AA2 2 LEU A 49 HIS A 50 0 SHEET 2 AA2 2 GLN A 115 VAL A 116 -1 O GLN A 115 N HIS A 50 SHEET 1 AA3 4 GLU A 274 ASP A 275 0 SHEET 2 AA3 4 PHE A 263 SER A 265 -1 N VAL A 264 O GLU A 274 SHEET 3 AA3 4 THR A 516 GLY A 519 -1 O TYR A 517 N SER A 265 SHEET 4 AA3 4 GLY A 507 ALA A 511 -1 N ALA A 511 O THR A 516 SHEET 1 AA4 2 GLN A 311 ASN A 312 0 SHEET 2 AA4 2 ARG A 315 TRP A 316 -1 O ARG A 315 N ASN A 312 SHEET 1 AA5 7 GLU B 22 ILE B 24 0 SHEET 2 AA5 7 PHE B 219 THR B 222 -1 O PHE B 219 N ILE B 24 SHEET 3 AA5 7 SER B 210 TYR B 214 -1 N LYS B 213 O GLU B 220 SHEET 4 AA5 7 THR B 191 ASP B 195 1 N PHE B 193 O SER B 210 SHEET 5 AA5 7 THR B 39 PHE B 42 1 N VAL B 41 O ILE B 194 SHEET 6 AA5 7 GLN B 133 SER B 138 1 O GLN B 133 N ILE B 40 SHEET 7 AA5 7 GLY B 160 VAL B 163 1 O TYR B 162 N CYS B 136 SHEET 1 AA6 2 LEU B 49 TRP B 51 0 SHEET 2 AA6 2 LEU B 114 VAL B 116 -1 O GLN B 115 N HIS B 50 SHEET 1 AA7 4 GLU B 274 ASP B 275 0 SHEET 2 AA7 4 PHE B 263 SER B 265 -1 N VAL B 264 O GLU B 274 SHEET 3 AA7 4 THR B 516 SER B 520 -1 O GLY B 519 N PHE B 263 SHEET 4 AA7 4 TYR B 506 ALA B 511 -1 N ALA B 511 O THR B 516 SHEET 1 AA8 2 GLN B 311 ASN B 312 0 SHEET 2 AA8 2 ARG B 315 TRP B 316 -1 O ARG B 315 N ASN B 312 CISPEP 1 LYS A 171 PRO A 172 0 3.58 CISPEP 2 LYS B 171 PRO B 172 0 2.01 CRYST1 97.032 97.032 405.183 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010306 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010306 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002468 0.00000 CONECT 8472 8473 8474 8475 8476 CONECT 8473 8472 CONECT 8474 8472 CONECT 8475 8472 CONECT 8476 8472 CONECT 8477 8478 8479 8480 8481 CONECT 8478 8477 CONECT 8479 8477 CONECT 8480 8477 CONECT 8481 8477 CONECT 8482 8483 8484 8485 8486 CONECT 8483 8482 CONECT 8484 8482 CONECT 8485 8482 CONECT 8486 8482 CONECT 8487 8488 8489 8490 8491 CONECT 8488 8487 CONECT 8489 8487 CONECT 8490 8487 CONECT 8491 8487 CONECT 8492 8493 8494 8495 8496 CONECT 8493 8492 CONECT 8494 8492 CONECT 8495 8492 CONECT 8496 8492 CONECT 8497 8498 8499 8500 8501 CONECT 8498 8497 CONECT 8499 8497 CONECT 8500 8497 CONECT 8501 8497 CONECT 8502 8503 8504 8505 8506 CONECT 8503 8502 CONECT 8504 8502 CONECT 8505 8502 CONECT 8506 8502 CONECT 8507 8508 8509 8510 8511 CONECT 8508 8507 CONECT 8509 8507 CONECT 8510 8507 CONECT 8511 8507 CONECT 8512 8513 8514 8515 8516 CONECT 8513 8512 CONECT 8514 8512 CONECT 8515 8512 CONECT 8516 8512 CONECT 8517 8518 8519 8520 8521 CONECT 8518 8517 CONECT 8519 8517 CONECT 8520 8517 CONECT 8521 8517 CONECT 8578 8579 8580 8581 8582 CONECT 8579 8578 CONECT 8580 8578 CONECT 8581 8578 CONECT 8582 8578 CONECT 8583 8584 8585 8586 8587 CONECT 8584 8583 CONECT 8585 8583 CONECT 8586 8583 CONECT 8587 8583 CONECT 8588 8589 8590 8591 8592 CONECT 8589 8588 CONECT 8590 8588 CONECT 8591 8588 CONECT 8592 8588 CONECT 8593 8594 8595 8596 8597 CONECT 8594 8593 CONECT 8595 8593 CONECT 8596 8593 CONECT 8597 8593 CONECT 8598 8599 8600 8601 8602 CONECT 8599 8598 CONECT 8600 8598 CONECT 8601 8598 CONECT 8602 8598 CONECT 8603 8604 8605 8606 8607 CONECT 8604 8603 CONECT 8605 8603 CONECT 8606 8603 CONECT 8607 8603 CONECT 8608 8609 8610 8611 8612 CONECT 8609 8608 CONECT 8610 8608 CONECT 8611 8608 CONECT 8612 8608 MASTER 347 0 34 56 30 0 0 6 8905 2 85 82 END