HEADER HYDROLASE 17-MAR-25 9MBI TITLE 8-OXO-DGTP HYDROLYSIS IN HUMAN MTH1(G2K MUTANT) CRYSTAL USING MN2+: TITLE 2 THE ES/EP-3M COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 42-197; COMPND 5 SYNONYM: MUTT HOMOLOGUE-1,2-HYDROXY-DATP DIPHOSPHATASE,8-OXO-DGTPASE, COMPND 6 NUCLEOSIDE DIPHOSPHATE-LINKED MOIETY X MOTIF 1,NUDIX MOTIF 1; COMPND 7 EC: 3.6.1.55,3.6.1.56; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NUDT1, MTH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXIDIZED PURINE NUCLEOSIDE TRIPHOSPHATE HYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.HIRATA,T.NAKAMURA REVDAT 1 30-JUL-25 9MBI 0 JRNL AUTH K.HIRATA,K.FUJIMIYA,A.OSTERMANN,T.E.SCHRADER,T.HIROMOTO, JRNL AUTH 2 M.GOTO,T.ARIMORI,Y.HIRANO,K.KUSAKA,T.TAMADA,T.NAKAMURA JRNL TITL NEUTRON AND TIME-RESOLVED X-RAY CRYSTALLOGRAPHY REVEAL THE JRNL TITL 2 SUBSTRATE RECOGNITION AND CATALYTIC MECHANISM OF HUMAN NUDIX JRNL TITL 3 HYDROLASE MTH1. JRNL REF PROC.NATL.ACAD.SCI.USA V. 122 85122 2025 JRNL REFN ESSN 1091-6490 JRNL PMID 40674425 JRNL DOI 10.1073/PNAS.2510085122 REMARK 2 REMARK 2 RESOLUTION. 1.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 115397 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 5784 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.1300 - 3.3800 1.00 3927 224 0.1561 0.1736 REMARK 3 2 3.3800 - 2.6900 1.00 3794 187 0.1405 0.1752 REMARK 3 3 2.6900 - 2.3500 1.00 3720 200 0.1491 0.1676 REMARK 3 4 2.3500 - 2.1300 1.00 3686 209 0.1345 0.1447 REMARK 3 5 2.1300 - 1.9800 1.00 3692 218 0.1280 0.1640 REMARK 3 6 1.9800 - 1.8600 1.00 3686 173 0.1303 0.1534 REMARK 3 7 1.8600 - 1.7700 1.00 3667 201 0.1278 0.1425 REMARK 3 8 1.7700 - 1.6900 1.00 3672 191 0.1262 0.1577 REMARK 3 9 1.6900 - 1.6300 1.00 3652 209 0.1282 0.1450 REMARK 3 10 1.6300 - 1.5700 1.00 3681 197 0.1235 0.1647 REMARK 3 11 1.5700 - 1.5200 1.00 3623 198 0.1241 0.1446 REMARK 3 12 1.5200 - 1.4800 1.00 3628 186 0.1221 0.1431 REMARK 3 13 1.4800 - 1.4400 1.00 3678 167 0.1305 0.1662 REMARK 3 14 1.4400 - 1.4000 1.00 3621 170 0.1354 0.1658 REMARK 3 15 1.4000 - 1.3700 1.00 3628 208 0.1316 0.1615 REMARK 3 16 1.3700 - 1.3400 1.00 3659 189 0.1325 0.1758 REMARK 3 17 1.3400 - 1.3200 1.00 3623 189 0.1285 0.1712 REMARK 3 18 1.3200 - 1.2900 1.00 3597 176 0.1330 0.1610 REMARK 3 19 1.2900 - 1.2700 1.00 3687 180 0.1344 0.1544 REMARK 3 20 1.2700 - 1.2500 1.00 3627 179 0.1351 0.1695 REMARK 3 21 1.2500 - 1.2300 1.00 3582 206 0.1399 0.1659 REMARK 3 22 1.2300 - 1.2100 1.00 3636 202 0.1422 0.1992 REMARK 3 23 1.2100 - 1.1900 1.00 3566 182 0.1466 0.1757 REMARK 3 24 1.1900 - 1.1700 1.00 3650 194 0.1511 0.1746 REMARK 3 25 1.1700 - 1.1600 1.00 3612 199 0.1547 0.1711 REMARK 3 26 1.1600 - 1.1400 1.00 3637 182 0.1568 0.1738 REMARK 3 27 1.1400 - 1.1300 1.00 3628 181 0.1645 0.1821 REMARK 3 28 1.1300 - 1.1100 1.00 3578 193 0.1710 0.1847 REMARK 3 29 1.1100 - 1.1000 1.00 3610 198 0.1820 0.1886 REMARK 3 30 1.1000 - 1.0900 0.99 3566 196 0.2053 0.2102 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.081 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.734 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.38 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3022 REMARK 3 ANGLE : 1.381 4139 REMARK 3 CHIRALITY : 0.078 418 REMARK 3 PLANARITY : 0.008 533 REMARK 3 DIHEDRAL : 16.690 1159 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9MBI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-MAR-25. REMARK 100 THE DEPOSITION ID IS D_1300055942. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NE3A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 115495 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.090 REMARK 200 RESOLUTION RANGE LOW (A) : 32.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.11 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.55200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CITRATE, CACODYLATE, NACL, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.24850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.91950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.81850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.91950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.24850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.81850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 92 14.24 -151.60 REMARK 500 GLN A 92 35.42 -144.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 531 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A 532 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A 533 DISTANCE = 6.48 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 36 O REMARK 620 2 GLU A 56 OE2 84.9 REMARK 620 3 8DG A 204 O2A 99.7 175.3 REMARK 620 4 8DG A 204 O1B 103.6 98.3 81.4 REMARK 620 5 HOH A 306 O 170.1 88.0 87.5 70.5 REMARK 620 6 HOH A 421 O 88.5 88.5 90.8 166.5 98.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 202 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 52 OE1 REMARK 620 2 GLU A 56 OE2 93.4 REMARK 620 3 GLU A 100 OE1 151.0 67.8 REMARK 620 4 8DG A 204 O1B 108.1 85.0 92.6 REMARK 620 5 HOH A 302 O 102.5 156.2 102.8 73.3 REMARK 620 6 HOH A 307 O 93.1 107.5 73.3 154.9 89.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 203 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 52 OE2 REMARK 620 2 8DG A 204 O2B 103.9 REMARK 620 3 HOH A 302 O 105.6 67.1 REMARK 620 4 HOH A 320 O 83.6 104.1 168.3 REMARK 620 5 HOH A 359 O 94.6 147.2 81.9 104.7 REMARK 620 6 HOH A 470 O 168.2 84.2 85.3 86.1 82.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 203 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 36 O REMARK 620 2 GLU B 56 OE2 85.9 REMARK 620 3 GLU B 100 OE2 167.1 87.3 REMARK 620 4 8DG B 201 O2B 106.5 102.7 64.3 REMARK 620 5 8DG B 201 O1A 103.8 170.0 82.7 72.5 REMARK 620 6 HOH B 395 O 91.5 88.2 99.3 159.3 93.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 204 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 52 OE1 REMARK 620 2 GLU B 56 OE2 93.0 REMARK 620 3 GLU B 100 OE1 155.7 65.7 REMARK 620 4 8DG B 201 O2B 116.4 86.6 75.7 REMARK 620 5 HOH B 369 O 88.7 108.6 87.4 150.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 205 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 52 OE2 REMARK 620 2 8DG B 201 O1B 93.3 REMARK 620 3 HOH B 366 O 72.6 99.8 REMARK 620 4 HOH B 405 O 95.4 165.1 94.3 REMARK 620 N 1 2 3 DBREF 9MBI A 1 156 UNP P36639 8ODP_HUMAN 42 197 DBREF 9MBI B 1 156 UNP P36639 8ODP_HUMAN 42 197 SEQADV 9MBI LYS A 2 UNP P36639 GLY 43 ENGINEERED MUTATION SEQADV 9MBI LYS B 2 UNP P36639 GLY 43 ENGINEERED MUTATION SEQRES 1 A 156 MET LYS ALA SER ARG LEU TYR THR LEU VAL LEU VAL LEU SEQRES 2 A 156 GLN PRO GLN ARG VAL LEU LEU GLY MET LYS LYS ARG GLY SEQRES 3 A 156 PHE GLY ALA GLY ARG TRP ASN GLY PHE GLY GLY LYS VAL SEQRES 4 A 156 GLN GLU GLY GLU THR ILE GLU ASP GLY ALA ARG ARG GLU SEQRES 5 A 156 LEU GLN GLU GLU SER GLY LEU THR VAL ASP ALA LEU HIS SEQRES 6 A 156 LYS VAL GLY GLN ILE VAL PHE GLU PHE VAL GLY GLU PRO SEQRES 7 A 156 GLU LEU MET ASP VAL HIS VAL PHE CYS THR ASP SER ILE SEQRES 8 A 156 GLN GLY THR PRO VAL GLU SER ASP GLU MET ARG PRO CYS SEQRES 9 A 156 TRP PHE GLN LEU ASP GLN ILE PRO PHE LYS ASP MET TRP SEQRES 10 A 156 PRO ASP ASP SER TYR TRP PHE PRO LEU LEU LEU GLN LYS SEQRES 11 A 156 LYS LYS PHE HIS GLY TYR PHE LYS PHE GLN GLY GLN ASP SEQRES 12 A 156 THR ILE LEU ASP TYR THR LEU ARG GLU VAL ASP THR VAL SEQRES 1 B 156 MET LYS ALA SER ARG LEU TYR THR LEU VAL LEU VAL LEU SEQRES 2 B 156 GLN PRO GLN ARG VAL LEU LEU GLY MET LYS LYS ARG GLY SEQRES 3 B 156 PHE GLY ALA GLY ARG TRP ASN GLY PHE GLY GLY LYS VAL SEQRES 4 B 156 GLN GLU GLY GLU THR ILE GLU ASP GLY ALA ARG ARG GLU SEQRES 5 B 156 LEU GLN GLU GLU SER GLY LEU THR VAL ASP ALA LEU HIS SEQRES 6 B 156 LYS VAL GLY GLN ILE VAL PHE GLU PHE VAL GLY GLU PRO SEQRES 7 B 156 GLU LEU MET ASP VAL HIS VAL PHE CYS THR ASP SER ILE SEQRES 8 B 156 GLN GLY THR PRO VAL GLU SER ASP GLU MET ARG PRO CYS SEQRES 9 B 156 TRP PHE GLN LEU ASP GLN ILE PRO PHE LYS ASP MET TRP SEQRES 10 B 156 PRO ASP ASP SER TYR TRP PHE PRO LEU LEU LEU GLN LYS SEQRES 11 B 156 LYS LYS PHE HIS GLY TYR PHE LYS PHE GLN GLY GLN ASP SEQRES 12 B 156 THR ILE LEU ASP TYR THR LEU ARG GLU VAL ASP THR VAL HET MN A 201 1 HET MN A 202 1 HET MN A 203 1 HET 8DG A 204 32 HET 8OG A 205 24 HET 8DG B 201 32 HET 8OG B 202 24 HET MN B 203 1 HET MN B 204 1 HET MN B 205 1 HETNAM MN MANGANESE (II) ION HETNAM 8DG 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE HETNAM 8OG 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE HETSYN 8OG 8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE FORMUL 3 MN 6(MN 2+) FORMUL 6 8DG 2(C10 H16 N5 O14 P3) FORMUL 7 8OG 2(C10 H14 N5 O8 P) FORMUL 13 HOH *411(H2 O) HELIX 1 AA1 THR A 44 GLY A 58 1 15 HELIX 2 AA2 PRO A 112 MET A 116 5 5 HELIX 3 AA3 TRP A 117 PRO A 118 5 2 HELIX 4 AA4 ASP A 119 GLN A 129 1 11 HELIX 5 AA5 THR B 44 GLY B 58 1 15 HELIX 6 AA6 PRO B 112 MET B 116 5 5 HELIX 7 AA7 TRP B 117 PRO B 118 5 2 HELIX 8 AA8 ASP B 119 GLN B 129 1 11 SHEET 1 AA1 3 TRP A 32 ASN A 33 0 SHEET 2 AA1 3 ARG A 17 LYS A 23 -1 N GLY A 21 O ASN A 33 SHEET 3 AA1 3 MET A 101 GLN A 107 -1 O CYS A 104 N LEU A 20 SHEET 1 AA2 7 TRP A 32 ASN A 33 0 SHEET 2 AA2 7 ARG A 17 LYS A 23 -1 N GLY A 21 O ASN A 33 SHEET 3 AA2 7 SER A 4 LEU A 13 -1 N VAL A 12 O LEU A 19 SHEET 4 AA2 7 LEU A 80 THR A 88 1 O ASP A 82 N ARG A 5 SHEET 5 AA2 7 HIS A 65 PHE A 74 -1 N ILE A 70 O VAL A 83 SHEET 6 AA2 7 LYS A 132 GLN A 140 1 O PHE A 139 N GLU A 73 SHEET 7 AA2 7 THR A 144 VAL A 153 -1 O ASP A 147 N LYS A 138 SHEET 1 AA3 3 TRP B 32 ASN B 33 0 SHEET 2 AA3 3 ARG B 17 LYS B 23 -1 N GLY B 21 O ASN B 33 SHEET 3 AA3 3 MET B 101 GLN B 107 -1 O CYS B 104 N LEU B 20 SHEET 1 AA4 7 TRP B 32 ASN B 33 0 SHEET 2 AA4 7 ARG B 17 LYS B 23 -1 N GLY B 21 O ASN B 33 SHEET 3 AA4 7 SER B 4 LEU B 13 -1 N VAL B 12 O LEU B 19 SHEET 4 AA4 7 LEU B 80 GLN B 92 1 O ASP B 82 N ARG B 5 SHEET 5 AA4 7 THR B 60 PHE B 74 -1 N ALA B 63 O ASP B 89 SHEET 6 AA4 7 PHE B 133 GLN B 140 1 O PHE B 139 N GLU B 73 SHEET 7 AA4 7 THR B 144 GLU B 152 -1 O LEU B 146 N LYS B 138 LINK O GLY A 36 MN A MN A 201 1555 1555 2.17 LINK OE1 GLU A 52 MN A MN A 202 1555 1555 2.20 LINK OE2 GLU A 52 MN A MN A 203 1555 1555 2.26 LINK OE2 GLU A 56 MN A MN A 201 1555 1555 2.14 LINK OE2 GLU A 56 MN A MN A 202 1555 1555 2.35 LINK OE1AGLU A 100 MN A MN A 202 1555 1555 2.31 LINK MN A MN A 201 O2AA8DG A 204 1555 1555 2.05 LINK MN A MN A 201 O1BA8DG A 204 1555 1555 2.10 LINK MN A MN A 201 O HOH A 306 1555 1555 2.34 LINK MN A MN A 201 O HOH A 421 1555 1555 2.21 LINK MN A MN A 202 O1BA8DG A 204 1555 1555 2.40 LINK MN A MN A 202 O AHOH A 302 1555 1555 2.22 LINK MN A MN A 202 O HOH A 307 1555 1555 1.98 LINK MN A MN A 203 O2BA8DG A 204 1555 1555 2.72 LINK MN A MN A 203 O AHOH A 302 1555 1555 2.13 LINK MN A MN A 203 O HOH A 320 1555 1555 2.18 LINK MN A MN A 203 O HOH A 359 1555 1555 2.20 LINK MN A MN A 203 O HOH A 470 1555 1555 2.26 LINK O GLY B 36 MN A MN B 203 1555 1555 2.19 LINK OE1 GLU B 52 MN A MN B 204 1555 1555 2.22 LINK OE2 GLU B 52 MN A MN B 205 1555 1555 2.46 LINK OE2 GLU B 56 MN A MN B 203 1555 1555 2.15 LINK OE2 GLU B 56 MN A MN B 204 1555 1555 2.38 LINK OE2 GLU B 100 MN A MN B 203 1555 1555 2.56 LINK OE1 GLU B 100 MN A MN B 204 1555 1555 2.54 LINK O2BA8DG B 201 MN A MN B 203 1555 1555 2.26 LINK O1AA8DG B 201 MN A MN B 203 1555 1555 2.08 LINK O2BA8DG B 201 MN A MN B 204 1555 1555 2.64 LINK O1BA8DG B 201 MN A MN B 205 1555 1555 2.44 LINK MN A MN B 203 O HOH B 395 1555 1555 2.12 LINK MN A MN B 204 O HOH B 369 1555 1555 1.81 LINK MN A MN B 205 O HOH B 366 1555 1555 2.39 LINK MN A MN B 205 O HOH B 405 1555 1555 1.99 CRYST1 46.497 47.637 123.839 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021507 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020992 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008075 0.00000 CONECT 637 5612 CONECT 920 5613 CONECT 921 5614 CONECT 1005 5612 5613 CONECT 1773 5613 CONECT 3516 5727 CONECT 3751 5728 CONECT 3752 5729 CONECT 3836 5727 5728 CONECT 4565 5728 CONECT 4566 5727 CONECT 5612 637 1005 5621 5626 CONECT 5612 5735 5854 CONECT 5613 920 1005 1773 5621 CONECT 5613 5731 5736 CONECT 5614 921 5622 5731 5750 CONECT 5614 5791 5906 CONECT 5615 5616 5617 5618 5619 CONECT 5616 5615 CONECT 5617 5615 CONECT 5618 5615 CONECT 5619 5615 5620 CONECT 5620 5619 5621 5622 5623 CONECT 5621 5612 5613 5620 CONECT 5622 5614 5620 CONECT 5623 5620 5624 CONECT 5624 5623 5625 5626 5627 CONECT 5625 5624 CONECT 5626 5612 5624 CONECT 5627 5624 5628 CONECT 5628 5627 5629 CONECT 5629 5628 5630 5631 CONECT 5630 5629 5634 CONECT 5631 5629 5632 5633 CONECT 5632 5631 CONECT 5633 5631 5634 CONECT 5634 5630 5633 5635 CONECT 5635 5634 5636 5645 CONECT 5636 5635 5637 5646 CONECT 5637 5636 5638 CONECT 5638 5637 5639 5645 CONECT 5639 5638 5640 5641 CONECT 5640 5639 CONECT 5641 5639 5642 CONECT 5642 5641 5643 5644 CONECT 5643 5642 CONECT 5644 5642 5645 CONECT 5645 5635 5638 5644 CONECT 5646 5636 CONECT 5647 5648 CONECT 5648 5647 5649 5650 5651 CONECT 5649 5648 CONECT 5650 5648 CONECT 5651 5648 5652 CONECT 5652 5651 5653 CONECT 5653 5652 5654 5655 CONECT 5654 5653 5658 CONECT 5655 5653 5656 5657 CONECT 5656 5655 CONECT 5657 5655 5658 CONECT 5658 5654 5657 5659 CONECT 5659 5658 5660 5669 CONECT 5660 5659 5661 5670 CONECT 5661 5660 5662 CONECT 5662 5661 5663 5669 CONECT 5663 5662 5664 5665 CONECT 5664 5663 CONECT 5665 5663 5666 CONECT 5666 5665 5667 5668 CONECT 5667 5666 CONECT 5668 5666 5669 CONECT 5669 5659 5662 5668 CONECT 5670 5660 CONECT 5671 5672 5673 5674 5675 CONECT 5672 5671 CONECT 5673 5671 CONECT 5674 5671 CONECT 5675 5671 5676 CONECT 5676 5675 5677 5678 5679 CONECT 5677 5676 5729 CONECT 5678 5676 5727 5728 CONECT 5679 5676 5680 CONECT 5680 5679 5681 5682 5683 CONECT 5681 5680 5727 CONECT 5682 5680 CONECT 5683 5680 5684 CONECT 5684 5683 5685 CONECT 5685 5684 5686 5687 CONECT 5686 5685 5690 CONECT 5687 5685 5688 5689 CONECT 5688 5687 CONECT 5689 5687 5690 CONECT 5690 5686 5689 5691 CONECT 5691 5690 5692 5701 CONECT 5692 5691 5693 5702 CONECT 5693 5692 5694 CONECT 5694 5693 5695 5701 CONECT 5695 5694 5696 5697 CONECT 5696 5695 CONECT 5697 5695 5698 CONECT 5698 5697 5699 5700 CONECT 5699 5698 CONECT 5700 5698 5701 CONECT 5701 5691 5694 5700 CONECT 5702 5692 CONECT 5703 5704 CONECT 5704 5703 5705 5706 5707 CONECT 5705 5704 CONECT 5706 5704 CONECT 5707 5704 5708 CONECT 5708 5707 5709 CONECT 5709 5708 5710 5711 CONECT 5710 5709 5714 CONECT 5711 5709 5712 5713 CONECT 5712 5711 CONECT 5713 5711 5714 CONECT 5714 5710 5713 5715 CONECT 5715 5714 5716 5725 CONECT 5716 5715 5717 5726 CONECT 5717 5716 5718 CONECT 5718 5717 5719 5725 CONECT 5719 5718 5720 5721 CONECT 5720 5719 CONECT 5721 5719 5722 CONECT 5722 5721 5723 5724 CONECT 5723 5722 CONECT 5724 5722 5725 CONECT 5725 5715 5718 5724 CONECT 5726 5716 CONECT 5727 3516 3836 4566 5678 CONECT 5727 5681 6068 CONECT 5728 3751 3836 4565 5678 CONECT 5728 6041 CONECT 5729 3752 5677 6038 6079 CONECT 5731 5613 5614 CONECT 5735 5612 CONECT 5736 5613 CONECT 5750 5614 CONECT 5791 5614 CONECT 5854 5612 CONECT 5906 5614 CONECT 6038 5729 CONECT 6041 5728 CONECT 6068 5727 CONECT 6079 5729 MASTER 334 0 10 8 20 0 0 6 3071 2 145 24 END