HEADER RNA 05-DEC-24 9MCW TITLE OLE RNA DIMER (CLOSTRIDIUM ACETOBUTYLICUM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: OLE RNA DIMER; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: CLOSTRIDIUM ACETOBUTYLICUM ATCC 824; SOURCE 4 ORGANISM_TAXID: 272562 KEYWDS OLE, NCRNA, RNA EXPDTA ELECTRON MICROSCOPY AUTHOR R.C.KRETSCH,Y.WU,R.DAS,W.CHIU REVDAT 3 30-JUL-25 9MCW 1 JRNL REVDAT 2 21-MAY-25 9MCW 1 JRNL REVDAT 1 23-APR-25 9MCW 0 JRNL AUTH R.C.KRETSCH,Y.WU,S.A.SHABALINA,H.LEE,G.NYE,E.V.KOONIN,A.GAO, JRNL AUTH 2 W.CHIU,R.DAS JRNL TITL NATURALLY ORNATE RNA-ONLY COMPLEXES REVEALED BY CRYO-EM. JRNL REF NATURE V. 643 1135 2025 JRNL REFN ESSN 1476-4687 JRNL PMID 40328315 JRNL DOI 10.1038/S41586-025-09073-0 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.C.KRETSCH,Y.WU,S.A.SHABALINA,H.LEE,G.NYE,E.V.KOONIN,A.GAO, REMARK 1 AUTH 2 W.CHIU,R.DAS REMARK 1 TITL NATURALLY ORNATE RNA-ONLY COMPLEXES REVEALED BY CRYO-EM REMARK 1 REF BIORXIV 2024 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/2024.12.08.627333 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC, CRYOSPARC, EPU, REMARK 3 CRYOSPARC, RELION, ROSETTA, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC, PHENIX, ROSETTA, REMARK 3 ISOLDE, COOT REMARK 3 RECONSTRUCTION SCHEMA : FOURIER SPACE REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : AB INITIO MODEL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.900 REMARK 3 NUMBER OF PARTICLES : 87716 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9MCW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-DEC-24. REMARK 100 THE DEPOSITION ID IS D_1000290760. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : OLE RNA DIMER - CLOSTRIDIUM REMARK 245 ACETOBUTYLICUM REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 2.80 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 6752 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2600.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 75000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 G A 1 REMARK 465 G A 2 REMARK 465 U A 3 REMARK 465 G A 4 REMARK 465 C A 5 REMARK 465 A A 6 REMARK 465 G A 7 REMARK 465 U A 8 REMARK 465 A A 9 REMARK 465 U A 10 REMARK 465 U A 11 REMARK 465 C A 12 REMARK 465 U A 13 REMARK 465 A A 14 REMARK 465 G A 15 REMARK 465 U A 16 REMARK 465 C A 17 REMARK 465 A A 18 REMARK 465 G A 19 REMARK 465 G A 20 REMARK 465 G A 21 REMARK 465 A A 22 REMARK 465 A A 23 REMARK 465 A A 24 REMARK 465 U A 25 REMARK 465 G A 26 REMARK 465 C A 27 REMARK 465 U A 28 REMARK 465 G A 291 REMARK 465 A A 292 REMARK 465 G A 293 REMARK 465 A A 294 REMARK 465 U A 295 REMARK 465 A A 296 REMARK 465 A A 297 REMARK 465 A A 298 REMARK 465 C A 299 REMARK 465 A A 300 REMARK 465 A A 301 REMARK 465 G A 302 REMARK 465 U A 303 REMARK 465 C A 304 REMARK 465 A A 305 REMARK 465 A A 306 REMARK 465 A A 307 REMARK 465 U A 325 REMARK 465 U A 326 REMARK 465 U A 327 REMARK 465 G A 328 REMARK 465 U A 329 REMARK 465 A A 330 REMARK 465 C A 331 REMARK 465 U A 332 REMARK 465 A A 333 REMARK 465 U A 334 REMARK 465 U A 335 REMARK 465 G A 336 REMARK 465 A A 337 REMARK 465 A A 338 REMARK 465 C A 339 REMARK 465 U A 340 REMARK 465 C A 341 REMARK 465 U A 342 REMARK 465 A A 372 REMARK 465 G A 373 REMARK 465 C A 374 REMARK 465 A A 375 REMARK 465 U A 376 REMARK 465 C A 377 REMARK 465 U A 378 REMARK 465 A A 379 REMARK 465 A A 380 REMARK 465 C A 381 REMARK 465 U A 382 REMARK 465 G A 383 REMARK 465 U A 384 REMARK 465 U A 385 REMARK 465 G A 386 REMARK 465 A A 387 REMARK 465 G A 388 REMARK 465 G A 389 REMARK 465 A A 390 REMARK 465 A A 391 REMARK 465 A A 392 REMARK 465 A A 393 REMARK 465 C A 394 REMARK 465 U A 395 REMARK 465 C A 396 REMARK 465 C A 397 REMARK 465 U A 398 REMARK 465 A A 399 REMARK 465 G A 400 REMARK 465 A A 401 REMARK 465 C A 402 REMARK 465 U A 403 REMARK 465 G A 404 REMARK 465 U A 405 REMARK 465 U A 406 REMARK 465 U A 407 REMARK 465 U A 408 REMARK 465 G A 409 REMARK 465 G A 410 REMARK 465 U A 411 REMARK 465 A A 412 REMARK 465 A A 413 REMARK 465 A A 414 REMARK 465 A A 415 REMARK 465 U A 416 REMARK 465 G A 417 REMARK 465 A A 418 REMARK 465 G A 419 REMARK 465 G A 420 REMARK 465 A A 421 REMARK 465 U A 422 REMARK 465 U A 423 REMARK 465 G A 424 REMARK 465 C A 425 REMARK 465 A A 426 REMARK 465 G A 427 REMARK 465 U A 428 REMARK 465 G A 429 REMARK 465 C A 430 REMARK 465 G A 431 REMARK 465 G A 432 REMARK 465 A A 433 REMARK 465 C A 434 REMARK 465 U A 435 REMARK 465 U A 436 REMARK 465 A A 437 REMARK 465 G A 438 REMARK 465 U A 439 REMARK 465 G A 440 REMARK 465 G A 441 REMARK 465 C A 442 REMARK 465 A A 443 REMARK 465 A A 444 REMARK 465 U A 445 REMARK 465 U A 446 REMARK 465 C A 447 REMARK 465 A A 448 REMARK 465 G A 449 REMARK 465 U A 450 REMARK 465 C A 451 REMARK 465 C A 452 REMARK 465 U A 453 REMARK 465 G A 454 REMARK 465 A A 455 REMARK 465 A A 456 REMARK 465 A A 457 REMARK 465 G A 458 REMARK 465 U A 459 REMARK 465 G A 460 REMARK 465 G A 461 REMARK 465 C A 462 REMARK 465 A A 463 REMARK 465 A A 464 REMARK 465 C A 465 REMARK 465 A A 466 REMARK 465 C A 467 REMARK 465 U A 468 REMARK 465 U A 469 REMARK 465 C A 470 REMARK 465 A A 471 REMARK 465 G A 472 REMARK 465 C A 473 REMARK 465 U A 474 REMARK 465 C A 475 REMARK 465 G A 476 REMARK 465 G A 477 REMARK 465 A A 478 REMARK 465 U A 479 REMARK 465 A A 480 REMARK 465 U A 481 REMARK 465 U A 482 REMARK 465 A A 483 REMARK 465 A A 484 REMARK 465 A A 485 REMARK 465 G A 486 REMARK 465 G A 487 REMARK 465 G A 488 REMARK 465 A A 489 REMARK 465 A A 490 REMARK 465 A A 491 REMARK 465 C A 492 REMARK 465 C A 493 REMARK 465 G A 494 REMARK 465 C A 495 REMARK 465 U A 496 REMARK 465 A A 497 REMARK 465 U A 498 REMARK 465 A A 499 REMARK 465 U A 500 REMARK 465 G A 501 REMARK 465 G A 502 REMARK 465 C A 503 REMARK 465 G A 504 REMARK 465 A A 505 REMARK 465 C A 506 REMARK 465 G A 507 REMARK 465 U A 508 REMARK 465 A A 509 REMARK 465 U A 510 REMARK 465 A A 511 REMARK 465 G A 512 REMARK 465 U A 513 REMARK 465 U A 514 REMARK 465 A A 515 REMARK 465 U A 516 REMARK 465 U A 517 REMARK 465 C A 518 REMARK 465 G A 519 REMARK 465 U A 520 REMARK 465 G A 521 REMARK 465 G A 522 REMARK 465 G A 523 REMARK 465 G A 524 REMARK 465 A A 525 REMARK 465 A A 526 REMARK 465 A A 527 REMARK 465 G A 528 REMARK 465 C A 529 REMARK 465 C A 530 REMARK 465 U A 531 REMARK 465 A A 532 REMARK 465 C A 533 REMARK 465 U A 534 REMARK 465 G A 535 REMARK 465 A A 536 REMARK 465 A A 537 REMARK 465 C A 538 REMARK 465 C A 539 REMARK 465 U A 540 REMARK 465 A A 541 REMARK 465 U A 542 REMARK 465 G A 543 REMARK 465 C A 544 REMARK 465 C A 545 REMARK 465 G A 546 REMARK 465 U A 547 REMARK 465 A A 548 REMARK 465 A A 549 REMARK 465 G A 550 REMARK 465 A A 551 REMARK 465 U A 552 REMARK 465 U A 553 REMARK 465 U A 554 REMARK 465 A A 555 REMARK 465 C A 556 REMARK 465 U A 557 REMARK 465 U A 558 REMARK 465 A A 559 REMARK 465 U A 560 REMARK 465 U A 561 REMARK 465 U A 562 REMARK 465 U A 563 REMARK 465 G A 564 REMARK 465 U A 565 REMARK 465 U A 566 REMARK 465 A A 567 REMARK 465 C A 568 REMARK 465 C A 569 REMARK 465 A A 570 REMARK 465 C A 571 REMARK 465 A A 572 REMARK 465 U A 573 REMARK 465 U A 574 REMARK 465 G A 575 REMARK 465 C A 576 REMARK 465 C A 577 REMARK 465 G B 1 REMARK 465 G B 2 REMARK 465 U B 3 REMARK 465 G B 4 REMARK 465 C B 5 REMARK 465 A B 6 REMARK 465 G B 7 REMARK 465 U B 8 REMARK 465 A B 9 REMARK 465 U B 10 REMARK 465 U B 11 REMARK 465 C B 12 REMARK 465 U B 13 REMARK 465 A B 14 REMARK 465 G B 15 REMARK 465 U B 16 REMARK 465 C B 17 REMARK 465 A B 18 REMARK 465 G B 19 REMARK 465 G B 20 REMARK 465 G B 21 REMARK 465 A B 22 REMARK 465 A B 23 REMARK 465 A B 24 REMARK 465 U B 25 REMARK 465 G B 26 REMARK 465 C B 27 REMARK 465 U B 28 REMARK 465 G B 291 REMARK 465 A B 292 REMARK 465 G B 293 REMARK 465 A B 294 REMARK 465 U B 295 REMARK 465 A B 296 REMARK 465 A B 297 REMARK 465 A B 298 REMARK 465 C B 299 REMARK 465 A B 300 REMARK 465 A B 301 REMARK 465 G B 302 REMARK 465 U B 303 REMARK 465 C B 304 REMARK 465 A B 305 REMARK 465 A B 306 REMARK 465 A B 307 REMARK 465 U B 325 REMARK 465 U B 326 REMARK 465 U B 327 REMARK 465 G B 328 REMARK 465 U B 329 REMARK 465 A B 330 REMARK 465 C B 331 REMARK 465 U B 332 REMARK 465 A B 333 REMARK 465 U B 334 REMARK 465 U B 335 REMARK 465 G B 336 REMARK 465 A B 337 REMARK 465 A B 338 REMARK 465 C B 339 REMARK 465 U B 340 REMARK 465 C B 341 REMARK 465 U B 342 REMARK 465 A B 372 REMARK 465 G B 373 REMARK 465 C B 374 REMARK 465 A B 375 REMARK 465 U B 376 REMARK 465 C B 377 REMARK 465 U B 378 REMARK 465 A B 379 REMARK 465 A B 380 REMARK 465 C B 381 REMARK 465 U B 382 REMARK 465 G B 383 REMARK 465 U B 384 REMARK 465 U B 385 REMARK 465 G B 386 REMARK 465 A B 387 REMARK 465 G B 388 REMARK 465 G B 389 REMARK 465 A B 390 REMARK 465 A B 391 REMARK 465 A B 392 REMARK 465 A B 393 REMARK 465 C B 394 REMARK 465 U B 395 REMARK 465 C B 396 REMARK 465 C B 397 REMARK 465 U B 398 REMARK 465 A B 399 REMARK 465 G B 400 REMARK 465 A B 401 REMARK 465 C B 402 REMARK 465 U B 403 REMARK 465 G B 404 REMARK 465 U B 405 REMARK 465 U B 406 REMARK 465 U B 407 REMARK 465 U B 408 REMARK 465 G B 409 REMARK 465 G B 410 REMARK 465 U B 411 REMARK 465 A B 412 REMARK 465 A B 413 REMARK 465 A B 414 REMARK 465 A B 415 REMARK 465 U B 416 REMARK 465 G B 417 REMARK 465 A B 418 REMARK 465 G B 419 REMARK 465 G B 420 REMARK 465 A B 421 REMARK 465 U B 422 REMARK 465 U B 423 REMARK 465 G B 424 REMARK 465 C B 425 REMARK 465 A B 426 REMARK 465 G B 427 REMARK 465 U B 428 REMARK 465 G B 429 REMARK 465 C B 430 REMARK 465 G B 431 REMARK 465 G B 432 REMARK 465 A B 433 REMARK 465 C B 434 REMARK 465 U B 435 REMARK 465 U B 436 REMARK 465 A B 437 REMARK 465 G B 438 REMARK 465 U B 439 REMARK 465 G B 440 REMARK 465 G B 441 REMARK 465 C B 442 REMARK 465 A B 443 REMARK 465 A B 444 REMARK 465 U B 445 REMARK 465 U B 446 REMARK 465 C B 447 REMARK 465 A B 448 REMARK 465 G B 449 REMARK 465 U B 450 REMARK 465 C B 451 REMARK 465 C B 452 REMARK 465 U B 453 REMARK 465 G B 454 REMARK 465 A B 455 REMARK 465 A B 456 REMARK 465 A B 457 REMARK 465 G B 458 REMARK 465 U B 459 REMARK 465 G B 460 REMARK 465 G B 461 REMARK 465 C B 462 REMARK 465 A B 463 REMARK 465 A B 464 REMARK 465 C B 465 REMARK 465 A B 466 REMARK 465 C B 467 REMARK 465 U B 468 REMARK 465 U B 469 REMARK 465 C B 470 REMARK 465 A B 471 REMARK 465 G B 472 REMARK 465 C B 473 REMARK 465 U B 474 REMARK 465 C B 475 REMARK 465 G B 476 REMARK 465 G B 477 REMARK 465 A B 478 REMARK 465 U B 479 REMARK 465 A B 480 REMARK 465 U B 481 REMARK 465 U B 482 REMARK 465 A B 483 REMARK 465 A B 484 REMARK 465 A B 485 REMARK 465 G B 486 REMARK 465 G B 487 REMARK 465 G B 488 REMARK 465 A B 489 REMARK 465 A B 490 REMARK 465 A B 491 REMARK 465 C B 492 REMARK 465 C B 493 REMARK 465 G B 494 REMARK 465 C B 495 REMARK 465 U B 496 REMARK 465 A B 497 REMARK 465 U B 498 REMARK 465 A B 499 REMARK 465 U B 500 REMARK 465 G B 501 REMARK 465 G B 502 REMARK 465 C B 503 REMARK 465 G B 504 REMARK 465 A B 505 REMARK 465 C B 506 REMARK 465 G B 507 REMARK 465 U B 508 REMARK 465 A B 509 REMARK 465 U B 510 REMARK 465 A B 511 REMARK 465 G B 512 REMARK 465 U B 513 REMARK 465 U B 514 REMARK 465 A B 515 REMARK 465 U B 516 REMARK 465 U B 517 REMARK 465 C B 518 REMARK 465 G B 519 REMARK 465 U B 520 REMARK 465 G B 521 REMARK 465 G B 522 REMARK 465 G B 523 REMARK 465 G B 524 REMARK 465 A B 525 REMARK 465 A B 526 REMARK 465 A B 527 REMARK 465 G B 528 REMARK 465 C B 529 REMARK 465 C B 530 REMARK 465 U B 531 REMARK 465 A B 532 REMARK 465 C B 533 REMARK 465 U B 534 REMARK 465 G B 535 REMARK 465 A B 536 REMARK 465 A B 537 REMARK 465 C B 538 REMARK 465 C B 539 REMARK 465 U B 540 REMARK 465 A B 541 REMARK 465 U B 542 REMARK 465 G B 543 REMARK 465 C B 544 REMARK 465 C B 545 REMARK 465 G B 546 REMARK 465 U B 547 REMARK 465 A B 548 REMARK 465 A B 549 REMARK 465 G B 550 REMARK 465 A B 551 REMARK 465 U B 552 REMARK 465 U B 553 REMARK 465 U B 554 REMARK 465 A B 555 REMARK 465 C B 556 REMARK 465 U B 557 REMARK 465 U B 558 REMARK 465 A B 559 REMARK 465 U B 560 REMARK 465 U B 561 REMARK 465 U B 562 REMARK 465 U B 563 REMARK 465 G B 564 REMARK 465 U B 565 REMARK 465 U B 566 REMARK 465 A B 567 REMARK 465 C B 568 REMARK 465 C B 569 REMARK 465 A B 570 REMARK 465 C B 571 REMARK 465 A B 572 REMARK 465 U B 573 REMARK 465 U B 574 REMARK 465 G B 575 REMARK 465 C B 576 REMARK 465 C B 577 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 U A 32 C5' U A 32 C4' -0.056 REMARK 500 G A 33 C5' G A 33 C4' -0.058 REMARK 500 A A 34 C5' A A 34 C4' -0.053 REMARK 500 A A 57 C5' A A 57 C4' -0.045 REMARK 500 A A 58 C5' A A 58 C4' -0.046 REMARK 500 G A 59 C5' G A 59 C4' -0.043 REMARK 500 G A 60 C5' G A 60 C4' -0.057 REMARK 500 A A 65 C5' A A 65 C4' -0.059 REMARK 500 U A 66 C5' U A 66 C4' -0.058 REMARK 500 G A 87 C5' G A 87 C4' -0.053 REMARK 500 C A 88 C5' C A 88 C4' -0.055 REMARK 500 C A 88 C5 C A 88 C6 -0.051 REMARK 500 A A 92 C5' A A 92 C4' -0.056 REMARK 500 A A 94 C5' A A 94 C4' -0.058 REMARK 500 A A 95 C5' A A 95 C4' -0.058 REMARK 500 U A 96 C5' U A 96 C4' -0.055 REMARK 500 C A 99 C5' C A 99 C4' -0.053 REMARK 500 C A 99 C5 C A 99 C6 -0.055 REMARK 500 C A 100 C5' C A 100 C4' -0.057 REMARK 500 C A 100 C5 C A 100 C6 -0.053 REMARK 500 A A 101 C5' A A 101 C4' -0.058 REMARK 500 C A 104 C5' C A 104 C4' -0.056 REMARK 500 C A 104 C5 C A 104 C6 -0.048 REMARK 500 U A 105 C5' U A 105 C4' -0.056 REMARK 500 U A 106 C5' U A 106 C4' -0.055 REMARK 500 G A 108 C5' G A 108 C4' -0.056 REMARK 500 G A 109 C5' G A 109 C4' -0.055 REMARK 500 C A 110 C5' C A 110 C4' -0.056 REMARK 500 C A 110 C5 C A 110 C6 -0.049 REMARK 500 A A 129 C5' A A 129 C4' -0.057 REMARK 500 A A 130 C5' A A 130 C4' -0.058 REMARK 500 G A 134 C5' G A 134 C4' -0.044 REMARK 500 G A 135 C5' G A 135 C4' -0.045 REMARK 500 G A 136 C5' G A 136 C4' -0.045 REMARK 500 G A 137 C5' G A 137 C4' -0.045 REMARK 500 A A 139 C5' A A 139 C4' -0.053 REMARK 500 C A 140 C5' C A 140 C4' -0.053 REMARK 500 C A 140 C5 C A 140 C6 -0.049 REMARK 500 C A 144 C5' C A 144 C4' -0.052 REMARK 500 C A 144 C5 C A 144 C6 -0.050 REMARK 500 A A 145 C5' A A 145 C4' -0.055 REMARK 500 U A 147 C5' U A 147 C4' -0.053 REMARK 500 G A 148 C5' G A 148 C4' -0.059 REMARK 500 G A 149 C5' G A 149 C4' -0.055 REMARK 500 C A 150 C5' C A 150 C4' -0.053 REMARK 500 C A 150 C5 C A 150 C6 -0.052 REMARK 500 A A 151 C5' A A 151 C4' -0.050 REMARK 500 U A 152 C5' U A 152 C4' -0.053 REMARK 500 G A 153 C5' G A 153 C4' -0.054 REMARK 500 C A 154 C5' C A 154 C4' -0.052 REMARK 500 REMARK 500 THIS ENTRY HAS 172 BOND DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G A 33 N7 - C8 - N9 ANGL. DEV. = 4.1 DEGREES REMARK 500 A A 34 N1 - C2 - N3 ANGL. DEV. = 3.7 DEGREES REMARK 500 A A 34 N7 - C8 - N9 ANGL. DEV. = 3.9 DEGREES REMARK 500 A A 35 C5 - C6 - N1 ANGL. DEV. = 3.1 DEGREES REMARK 500 A A 35 N1 - C6 - N6 ANGL. DEV. = -4.2 DEGREES REMARK 500 G A 41 N1 - C6 - O6 ANGL. DEV. = -3.7 DEGREES REMARK 500 G A 42 O4' - C1' - N9 ANGL. DEV. = 6.4 DEGREES REMARK 500 A A 45 C5 - C6 - N1 ANGL. DEV. = 3.8 DEGREES REMARK 500 A A 46 C4 - C5 - C6 ANGL. DEV. = -3.1 DEGREES REMARK 500 A A 46 C5 - C6 - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 A A 46 N1 - C6 - N6 ANGL. DEV. = -5.2 DEGREES REMARK 500 A A 47 C4 - C5 - C6 ANGL. DEV. = -3.0 DEGREES REMARK 500 A A 47 C5 - C6 - N1 ANGL. DEV. = 3.8 DEGREES REMARK 500 A A 47 N1 - C6 - N6 ANGL. DEV. = -5.7 DEGREES REMARK 500 A A 48 C5 - C6 - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 A A 48 N1 - C6 - N6 ANGL. DEV. = -4.5 DEGREES REMARK 500 A A 49 C5 - C6 - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 A A 49 N1 - C6 - N6 ANGL. DEV. = -4.6 DEGREES REMARK 500 C A 51 N3 - C2 - O2 ANGL. DEV. = -4.9 DEGREES REMARK 500 C A 52 N3 - C2 - O2 ANGL. DEV. = -4.2 DEGREES REMARK 500 C A 54 N3 - C2 - O2 ANGL. DEV. = -4.7 DEGREES REMARK 500 A A 57 N1 - C2 - N3 ANGL. DEV. = 3.2 DEGREES REMARK 500 A A 57 N7 - C8 - N9 ANGL. DEV. = 3.4 DEGREES REMARK 500 A A 58 N1 - C2 - N3 ANGL. DEV. = 3.4 DEGREES REMARK 500 A A 58 N7 - C8 - N9 ANGL. DEV. = 3.4 DEGREES REMARK 500 G A 59 N7 - C8 - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 G A 60 N7 - C8 - N9 ANGL. DEV. = 4.0 DEGREES REMARK 500 C A 62 N3 - C2 - O2 ANGL. DEV. = -4.4 DEGREES REMARK 500 A A 63 C4 - C5 - C6 ANGL. DEV. = -3.0 DEGREES REMARK 500 A A 63 C5 - C6 - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 A A 63 N1 - C6 - N6 ANGL. DEV. = -5.3 DEGREES REMARK 500 A A 65 N1 - C2 - N3 ANGL. DEV. = 3.7 DEGREES REMARK 500 A A 65 N7 - C8 - N9 ANGL. DEV. = 3.8 DEGREES REMARK 500 A A 72 C2 - N3 - C4 ANGL. DEV. = 3.3 DEGREES REMARK 500 A A 72 C5 - C6 - N1 ANGL. DEV. = 3.6 DEGREES REMARK 500 A A 72 N1 - C6 - N6 ANGL. DEV. = -3.7 DEGREES REMARK 500 A A 73 N1 - C6 - N6 ANGL. DEV. = -5.5 DEGREES REMARK 500 C A 77 N3 - C2 - O2 ANGL. DEV. = -4.6 DEGREES REMARK 500 C A 78 N3 - C2 - O2 ANGL. DEV. = -5.0 DEGREES REMARK 500 G A 81 N1 - C6 - O6 ANGL. DEV. = -3.6 DEGREES REMARK 500 C A 84 N3 - C2 - O2 ANGL. DEV. = -4.8 DEGREES REMARK 500 G A 87 N7 - C8 - N9 ANGL. DEV. = 4.0 DEGREES REMARK 500 C A 88 C6 - N1 - C2 ANGL. DEV. = -3.0 DEGREES REMARK 500 A A 92 N1 - C2 - N3 ANGL. DEV. = 3.8 DEGREES REMARK 500 A A 92 N7 - C8 - N9 ANGL. DEV. = 3.8 DEGREES REMARK 500 A A 94 N1 - C2 - N3 ANGL. DEV. = 3.7 DEGREES REMARK 500 A A 94 N7 - C8 - N9 ANGL. DEV. = 3.7 DEGREES REMARK 500 A A 95 N1 - C2 - N3 ANGL. DEV. = 3.7 DEGREES REMARK 500 A A 95 N7 - C8 - N9 ANGL. DEV. = 4.0 DEGREES REMARK 500 C A 99 C6 - N1 - C2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 414 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 A A 45 0.06 SIDE CHAIN REMARK 500 U A 117 0.08 SIDE CHAIN REMARK 500 C A 216 0.06 SIDE CHAIN REMARK 500 U A 310 0.06 SIDE CHAIN REMARK 500 U A 311 0.08 SIDE CHAIN REMARK 500 G A 316 0.12 SIDE CHAIN REMARK 500 C A 318 0.09 SIDE CHAIN REMARK 500 U B 117 0.14 SIDE CHAIN REMARK 500 A B 218 0.05 SIDE CHAIN REMARK 500 U B 254 0.06 SIDE CHAIN REMARK 500 U B 310 0.07 SIDE CHAIN REMARK 500 G B 315 0.09 SIDE CHAIN REMARK 500 C B 318 0.20 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-48162 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-48163 RELATED DB: EMDB REMARK 900 OLE RNA DIMER (CLOSTRIDIUM ACETOBUTYLICUM) DBREF1 9MCW A 1 577 GB AE001437.1 DBREF2 9MCW A 25168256 2182102 2181526 DBREF1 9MCW B 1 577 GB AE001437.1 DBREF2 9MCW B 25168256 2182102 2181526 SEQADV 9MCW C A 576 GB 25168256 A 81527 CONFLICT SEQADV 9MCW C A 577 GB 25168256 U 81526 CONFLICT SEQADV 9MCW C B 576 GB 25168256 A 81527 CONFLICT SEQADV 9MCW C B 577 GB 25168256 U 81526 CONFLICT SEQRES 1 A 577 G G U G C A G U A U U C U SEQRES 2 A 577 A G U C A G G G A A A U G SEQRES 3 A 577 C U U U U U G A A G G C G SEQRES 4 A 577 G G G C U A A A A A U C C SEQRES 5 A 577 G C U A A A G G G C A C A SEQRES 6 A 577 U C G A U G A A G U U C C SEQRES 7 A 577 U G G U G C U G G C C U U SEQRES 8 A 577 A G A A U G C C C A G U C SEQRES 9 A 577 U U G G G C U U G U G C U SEQRES 10 A 577 G G G A G U U A A A A A A SEQRES 11 A 577 G C U G G G G C A C U C G SEQRES 12 A 577 C A A U G G C A U G C G A SEQRES 13 A 577 C A A A U G A C C C U A C SEQRES 14 A 577 U U U U G U G G A G G C C SEQRES 15 A 577 A A U U A U U G U A U A U SEQRES 16 A 577 U G A G A G A G A U A U U SEQRES 17 A 577 C A A U A U A C G A A A U SEQRES 18 A 577 U G G G G U A A A C C U G SEQRES 19 A 577 C A A U G U G G U G U A A SEQRES 20 A 577 A A G C U A U G U G C A G SEQRES 21 A 577 U G U A G C C U G C C U U SEQRES 22 A 577 G A G U G G U A U G G G G SEQRES 23 A 577 A G A G G A G A U A A A C SEQRES 24 A 577 A A G U C A A A A A U U U SEQRES 25 A 577 U A G G C C U A A G U U U SEQRES 26 A 577 U U G U A C U A U U G A A SEQRES 27 A 577 C U C U G A A A C C U A U SEQRES 28 A 577 G U U G C A A A A G A G G SEQRES 29 A 577 C U A A G A A A G C A U C SEQRES 30 A 577 U A A C U G U U G A G G A SEQRES 31 A 577 A A A C U C C U A G A C U SEQRES 32 A 577 G U U U U G G U A A A A U SEQRES 33 A 577 G A G G A U U G C A G U G SEQRES 34 A 577 C G G A C U U A G U G G C SEQRES 35 A 577 A A U U C A G U C C U G A SEQRES 36 A 577 A A G U G G C A A C A C U SEQRES 37 A 577 U C A G C U C G G A U A U SEQRES 38 A 577 U A A A G G G A A A C C G SEQRES 39 A 577 C U A U A U G G C G A C G SEQRES 40 A 577 U A U A G U U A U U C G U SEQRES 41 A 577 G G G G A A A G C C U A C SEQRES 42 A 577 U G A A C C U A U G C C G SEQRES 43 A 577 U A A G A U U U A C U U A SEQRES 44 A 577 U U U U G U U A C C A C A SEQRES 45 A 577 U U G C C SEQRES 1 B 577 G G U G C A G U A U U C U SEQRES 2 B 577 A G U C A G G G A A A U G SEQRES 3 B 577 C U U U U U G A A G G C G SEQRES 4 B 577 G G G C U A A A A A U C C SEQRES 5 B 577 G C U A A A G G G C A C A SEQRES 6 B 577 U C G A U G A A G U U C C SEQRES 7 B 577 U G G U G C U G G C C U U SEQRES 8 B 577 A G A A U G C C C A G U C SEQRES 9 B 577 U U G G G C U U G U G C U SEQRES 10 B 577 G G G A G U U A A A A A A SEQRES 11 B 577 G C U G G G G C A C U C G SEQRES 12 B 577 C A A U G G C A U G C G A SEQRES 13 B 577 C A A A U G A C C C U A C SEQRES 14 B 577 U U U U G U G G A G G C C SEQRES 15 B 577 A A U U A U U G U A U A U SEQRES 16 B 577 U G A G A G A G A U A U U SEQRES 17 B 577 C A A U A U A C G A A A U SEQRES 18 B 577 U G G G G U A A A C C U G SEQRES 19 B 577 C A A U G U G G U G U A A SEQRES 20 B 577 A A G C U A U G U G C A G SEQRES 21 B 577 U G U A G C C U G C C U U SEQRES 22 B 577 G A G U G G U A U G G G G SEQRES 23 B 577 A G A G G A G A U A A A C SEQRES 24 B 577 A A G U C A A A A A U U U SEQRES 25 B 577 U A G G C C U A A G U U U SEQRES 26 B 577 U U G U A C U A U U G A A SEQRES 27 B 577 C U C U G A A A C C U A U SEQRES 28 B 577 G U U G C A A A A G A G G SEQRES 29 B 577 C U A A G A A A G C A U C SEQRES 30 B 577 U A A C U G U U G A G G A SEQRES 31 B 577 A A A C U C C U A G A C U SEQRES 32 B 577 G U U U U G G U A A A A U SEQRES 33 B 577 G A G G A U U G C A G U G SEQRES 34 B 577 C G G A C U U A G U G G C SEQRES 35 B 577 A A U U C A G U C C U G A SEQRES 36 B 577 A A G U G G C A A C A C U SEQRES 37 B 577 U C A G C U C G G A U A U SEQRES 38 B 577 U A A A G G G A A A C C G SEQRES 39 B 577 C U A U A U G G C G A C G SEQRES 40 B 577 U A U A G U U A U U C G U SEQRES 41 B 577 G G G G A A A G C C U A C SEQRES 42 B 577 U G A A C C U A U G C C G SEQRES 43 B 577 U A A G A U U U A C U U A SEQRES 44 B 577 U U U U G U U A C C A C A SEQRES 45 B 577 U U G C C CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 6604 A A 371 TER 13208 A B 371 MASTER 823 0 0 0 0 0 0 613206 2 0 90 END