HEADER TRANSCRIPTION 20-DEC-24 9MN6 TITLE STRUCTURE OF THE HUMAN MITOCHONDRIAL LATE-STAGE TRANSCRIPTION TITLE 2 INITIATION COMPLEX, IC8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-TEMPLATE STRAND DNA; COMPND 3 CHAIN: N; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RNA; COMPND 7 CHAIN: R; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: TEMPLATE STRAND DNA; COMPND 11 CHAIN: T; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL; COMPND 15 CHAIN: E; COMPND 16 SYNONYM: MTRPOL; COMPND 17 EC: 2.7.7.6; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 5; COMPND 20 MOLECULE: DIMETHYLADENOSINE TRANSFERASE 2, MITOCHONDRIAL; COMPND 21 CHAIN: B; COMPND 22 SYNONYM: HEPATITIS C VIRUS NS5A-TRANSACTIVATED PROTEIN 5,HCV NS5A- COMPND 23 TRANSACTIVATED PROTEIN 5,MITOCHONDRIAL 12S RRNA DIMETHYLASE 2, COMPND 24 MITOCHONDRIAL TRANSCRIPTION FACTOR B2,H-MTTFB,H-MTTFB2,HTFB2M,MTTFB2, COMPND 25 S-ADENOSYLMETHIONINE-6-N',N'-ADENOSYL(RRNA) DIMETHYLTRANSFERASE 2; COMPND 26 EC: 2.1.1.-; COMPND 27 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 12 ORGANISM_TAXID: 32630; SOURCE 13 MOL_ID: 4; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 GENE: POLRMT; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 20 MOL_ID: 5; SOURCE 21 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 22 ORGANISM_COMMON: HUMAN; SOURCE 23 ORGANISM_TAXID: 9606; SOURCE 24 GENE: TFB2M, NS5ATP5; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MITOCHONDRIAL RNA POLYMERASE, TRANSCRIPTION INITIATION COMPLEX, KEYWDS 2 TRANSCRIPTION, POLRMT, TRANSCRIPTION-DNA-RNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR K.H.HERBINE,A.R.NAYAK,D.TEMIAKOV REVDAT 2 03-SEP-25 9MN6 1 JRNL REVDAT 1 06-AUG-25 9MN6 0 JRNL AUTH K.HERBINE,A.R.NAYAK,A.ZAMUDIO-OCHOA,D.TEMIAKOV JRNL TITL STRUCTURAL BASIS FOR PROMOTER RECOGNITION AND TRANSCRIPTION JRNL TITL 2 FACTOR BINDING AND RELEASE IN HUMAN MITOCHONDRIA. JRNL REF MOL.CELL V. 85 3123 2025 JRNL REFN ISSN 1097-2765 JRNL PMID 40712587 JRNL DOI 10.1016/J.MOLCEL.2025.06.016 REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, LEGINON, CRYOSPARC, COOT, REMARK 3 PHENIX, CRYOSPARC, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 6ERP REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : CROSS-CORRELATION COEFFICIENT REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : INITIAL DOCKING OF THE STARTING MODEL WAS DONE REMARK 3 IN CHIMERA AND FLEXIBLE/REFINED FITTING DONE WITH COOT, AND REMARK 3 PHENIX REAL-SPACE REFINEMENT. REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.710 REMARK 3 NUMBER OF PARTICLES : 147533 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9MN6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-DEC-24. REMARK 100 THE DEPOSITION ID IS D_1000290976. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : STRUCTURE OF THE HUMAN REMARK 245 MITOCHONDRIAL LATE-STAGE REMARK 245 TRANSCRIPTION INITIATION REMARK 245 COMPLEX, IC8 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.75 REMARK 245 SAMPLE SUPPORT DETAILS : 15 MA REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.90 REMARK 245 SAMPLE DETAILS : HUMAN MITOCHONDRIAL RNA REMARK 245 POLYMERASE (D119), TFAM (D42), AND TFB2M (D20) ASSEMBLED ON REMARK 245 PROMOTER DNA CONTAINING A PREMELTED BUBBLE, A 3-MER PRIMER RNA, REMARK 245 ATP, AND 3'-DEOXYGTP. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 17559 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 400.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4544.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 165000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : PRELIMINARY GRID SCREENING REMARK 245 PERFORMED MANUALLY USING TFS GLACIOS. REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: N, R, T, E, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DG N -4 REMARK 465 DT N -3 REMARK 465 DG N -2 REMARK 465 DT N -1 REMARK 465 DT N 0 REMARK 465 DA N 1 REMARK 465 DG N 2 REMARK 465 DT N 3 REMARK 465 DT N 4 REMARK 465 DA N 5 REMARK 465 DG N 6 REMARK 465 DG N 7 REMARK 465 DG N 8 REMARK 465 DA N 9 REMARK 465 DG N 10 REMARK 465 DT N 11 REMARK 465 DG N 12 REMARK 465 DA N 13 REMARK 465 DC N 14 REMARK 465 DT N 15 REMARK 465 DG N 16 REMARK 465 DT N 17 REMARK 465 DT N 18 REMARK 465 DA N 19 REMARK 465 DA N 20 REMARK 465 DA N 21 REMARK 465 DA N 22 REMARK 465 DA N 53 REMARK 465 DT N 54 REMARK 465 DT N 55 REMARK 465 DG N 56 REMARK 465 DT N 57 REMARK 465 DG N 58 REMARK 465 DG N 59 REMARK 465 DC N 60 REMARK 465 DC N 61 REMARK 465 DG T -10 REMARK 465 DG T -9 REMARK 465 DC T -8 REMARK 465 DC T -7 REMARK 465 DA T -6 REMARK 465 DC T -5 REMARK 465 DA T -4 REMARK 465 DA T -3 REMARK 465 DT T -2 REMARK 465 DT T 29 REMARK 465 DT T 30 REMARK 465 DT T 31 REMARK 465 DT T 32 REMARK 465 DA T 33 REMARK 465 DA T 34 REMARK 465 DC T 35 REMARK 465 DA T 36 REMARK 465 DG T 37 REMARK 465 DT T 38 REMARK 465 DC T 39 REMARK 465 DA T 40 REMARK 465 DC T 41 REMARK 465 DT T 42 REMARK 465 DC T 43 REMARK 465 DC T 44 REMARK 465 DC T 45 REMARK 465 DT T 46 REMARK 465 DA T 47 REMARK 465 DA T 48 REMARK 465 DC T 49 REMARK 465 DT T 50 REMARK 465 DA T 51 REMARK 465 DA T 52 REMARK 465 DC T 53 REMARK 465 DA T 54 REMARK 465 DC T 55 REMARK 465 MET E 1 REMARK 465 SER E 2 REMARK 465 ALA E 3 REMARK 465 LEU E 4 REMARK 465 CYS E 5 REMARK 465 TRP E 6 REMARK 465 GLY E 7 REMARK 465 ARG E 8 REMARK 465 GLY E 9 REMARK 465 ALA E 10 REMARK 465 ALA E 11 REMARK 465 GLY E 12 REMARK 465 LEU E 13 REMARK 465 LYS E 14 REMARK 465 ARG E 15 REMARK 465 ALA E 16 REMARK 465 LEU E 17 REMARK 465 ARG E 18 REMARK 465 PRO E 19 REMARK 465 CYS E 20 REMARK 465 GLY E 21 REMARK 465 ARG E 22 REMARK 465 PRO E 23 REMARK 465 GLY E 24 REMARK 465 LEU E 25 REMARK 465 PRO E 26 REMARK 465 GLY E 27 REMARK 465 LYS E 28 REMARK 465 GLU E 29 REMARK 465 GLY E 30 REMARK 465 THR E 31 REMARK 465 ALA E 32 REMARK 465 GLY E 33 REMARK 465 GLY E 34 REMARK 465 VAL E 35 REMARK 465 CYS E 36 REMARK 465 GLY E 37 REMARK 465 PRO E 38 REMARK 465 ARG E 39 REMARK 465 ARG E 40 REMARK 465 SER E 41 REMARK 465 SER E 42 REMARK 465 SER E 43 REMARK 465 ALA E 44 REMARK 465 SER E 45 REMARK 465 PRO E 46 REMARK 465 GLN E 47 REMARK 465 GLU E 48 REMARK 465 GLN E 49 REMARK 465 ASP E 50 REMARK 465 GLN E 51 REMARK 465 ASP E 52 REMARK 465 ARG E 53 REMARK 465 ARG E 54 REMARK 465 LYS E 55 REMARK 465 ASP E 56 REMARK 465 TRP E 57 REMARK 465 GLY E 58 REMARK 465 HIS E 59 REMARK 465 VAL E 60 REMARK 465 GLU E 61 REMARK 465 LEU E 62 REMARK 465 LEU E 63 REMARK 465 GLU E 64 REMARK 465 VAL E 65 REMARK 465 LEU E 66 REMARK 465 GLN E 67 REMARK 465 ALA E 68 REMARK 465 ARG E 69 REMARK 465 VAL E 70 REMARK 465 ARG E 71 REMARK 465 GLN E 72 REMARK 465 LEU E 73 REMARK 465 GLN E 74 REMARK 465 ALA E 75 REMARK 465 GLU E 76 REMARK 465 SER E 77 REMARK 465 VAL E 78 REMARK 465 SER E 79 REMARK 465 GLU E 80 REMARK 465 VAL E 81 REMARK 465 VAL E 82 REMARK 465 VAL E 83 REMARK 465 ASN E 84 REMARK 465 ARG E 85 REMARK 465 VAL E 86 REMARK 465 ASP E 87 REMARK 465 VAL E 88 REMARK 465 ALA E 89 REMARK 465 ARG E 90 REMARK 465 LEU E 91 REMARK 465 PRO E 92 REMARK 465 GLU E 93 REMARK 465 CYS E 94 REMARK 465 GLY E 95 REMARK 465 SER E 96 REMARK 465 GLY E 97 REMARK 465 ASP E 98 REMARK 465 GLY E 99 REMARK 465 SER E 100 REMARK 465 LEU E 101 REMARK 465 GLN E 102 REMARK 465 PRO E 103 REMARK 465 PRO E 104 REMARK 465 ARG E 105 REMARK 465 LYS E 106 REMARK 465 VAL E 107 REMARK 465 GLN E 108 REMARK 465 MET E 109 REMARK 465 GLY E 110 REMARK 465 ALA E 111 REMARK 465 LYS E 112 REMARK 465 ASP E 113 REMARK 465 ALA E 114 REMARK 465 THR E 115 REMARK 465 PRO E 116 REMARK 465 VAL E 117 REMARK 465 PRO E 118 REMARK 465 CYS E 119 REMARK 465 GLY E 120 REMARK 465 ARG E 121 REMARK 465 TRP E 122 REMARK 465 ALA E 123 REMARK 465 LYS E 124 REMARK 465 ILE E 125 REMARK 465 LEU E 126 REMARK 465 GLU E 127 REMARK 465 LYS E 128 REMARK 465 ASP E 129 REMARK 465 LYS E 130 REMARK 465 ARG E 131 REMARK 465 THR E 132 REMARK 465 GLN E 133 REMARK 465 GLN E 134 REMARK 465 MET E 135 REMARK 465 ARG E 136 REMARK 465 MET E 137 REMARK 465 GLN E 138 REMARK 465 ARG E 139 REMARK 465 LEU E 140 REMARK 465 LYS E 141 REMARK 465 ALA E 142 REMARK 465 LYS E 143 REMARK 465 LEU E 144 REMARK 465 GLN E 145 REMARK 465 MET E 146 REMARK 465 PRO E 147 REMARK 465 PHE E 148 REMARK 465 GLN E 149 REMARK 465 SER E 150 REMARK 465 GLY E 151 REMARK 465 GLU E 152 REMARK 465 PHE E 153 REMARK 465 LYS E 154 REMARK 465 ALA E 155 REMARK 465 LEU E 156 REMARK 465 THR E 157 REMARK 465 ARG E 158 REMARK 465 ARG E 159 REMARK 465 LEU E 160 REMARK 465 GLN E 161 REMARK 465 VAL E 162 REMARK 465 GLU E 163 REMARK 465 PRO E 164 REMARK 465 ARG E 165 REMARK 465 LEU E 166 REMARK 465 LEU E 167 REMARK 465 SER E 168 REMARK 465 LYS E 169 REMARK 465 GLN E 170 REMARK 465 MET E 171 REMARK 465 ALA E 172 REMARK 465 GLY E 173 REMARK 465 CYS E 174 REMARK 465 LEU E 175 REMARK 465 GLU E 176 REMARK 465 ASP E 177 REMARK 465 CYS E 178 REMARK 465 THR E 179 REMARK 465 ARG E 180 REMARK 465 GLN E 181 REMARK 465 ALA E 182 REMARK 465 PRO E 183 REMARK 465 GLU E 184 REMARK 465 SER E 185 REMARK 465 PRO E 186 REMARK 465 TRP E 187 REMARK 465 GLU E 188 REMARK 465 GLU E 189 REMARK 465 GLN E 190 REMARK 465 LEU E 191 REMARK 465 ALA E 192 REMARK 465 ARG E 193 REMARK 465 LEU E 194 REMARK 465 LEU E 195 REMARK 465 GLN E 196 REMARK 465 GLU E 197 REMARK 465 ALA E 198 REMARK 465 PRO E 199 REMARK 465 GLY E 200 REMARK 465 LYS E 201 REMARK 465 LEU E 202 REMARK 465 SER E 203 REMARK 465 LEU E 204 REMARK 465 ASP E 205 REMARK 465 VAL E 206 REMARK 465 GLU E 207 REMARK 465 GLN E 208 REMARK 465 ALA E 209 REMARK 465 PRO E 210 REMARK 465 SER E 211 REMARK 465 GLY E 212 REMARK 465 GLN E 213 REMARK 465 HIS E 214 REMARK 465 SER E 215 REMARK 465 GLN E 216 REMARK 465 ALA E 217 REMARK 465 PRO E 741 REMARK 465 PRO E 742 REMARK 465 GLU E 743 REMARK 465 ALA E 744 REMARK 465 HIS E 745 REMARK 465 LEU E 746 REMARK 465 PRO E 747 REMARK 465 HIS E 748 REMARK 465 SER E 749 REMARK 465 ALA E 750 REMARK 465 ALA E 751 REMARK 465 PRO E 752 REMARK 465 ALA E 753 REMARK 465 ARG E 754 REMARK 465 LYS E 755 REMARK 465 ALA E 756 REMARK 465 MET B 1 REMARK 465 TRP B 2 REMARK 465 ILE B 3 REMARK 465 PRO B 4 REMARK 465 VAL B 5 REMARK 465 VAL B 6 REMARK 465 GLY B 7 REMARK 465 LEU B 8 REMARK 465 PRO B 9 REMARK 465 ARG B 10 REMARK 465 ARG B 11 REMARK 465 LEU B 12 REMARK 465 ARG B 13 REMARK 465 LEU B 14 REMARK 465 SER B 15 REMARK 465 ALA B 16 REMARK 465 LEU B 17 REMARK 465 ALA B 18 REMARK 465 GLY B 19 REMARK 465 ALA B 20 REMARK 465 GLY B 21 REMARK 465 ARG B 22 REMARK 465 PHE B 23 REMARK 465 CYS B 24 REMARK 465 ILE B 25 REMARK 465 LEU B 26 REMARK 465 GLY B 27 REMARK 465 SER B 28 REMARK 465 GLU B 29 REMARK 465 ALA B 30 REMARK 465 ALA B 31 REMARK 465 THR B 32 REMARK 465 ARG B 33 REMARK 465 LYS B 34 REMARK 465 HIS B 35 REMARK 465 LEU B 36 REMARK 465 PRO B 37 REMARK 465 ALA B 38 REMARK 465 ARG B 39 REMARK 465 ASN B 40 REMARK 465 HIS B 41 REMARK 465 CYS B 42 REMARK 465 GLY B 43 REMARK 465 LEU B 44 REMARK 465 SER B 45 REMARK 465 ASP B 46 REMARK 465 SER B 47 REMARK 465 SER B 48 REMARK 465 PRO B 49 REMARK 465 GLN B 50 REMARK 465 LEU B 51 REMARK 465 TRP B 52 REMARK 465 PRO B 53 REMARK 465 GLU B 54 REMARK 465 PRO B 55 REMARK 465 ASP B 56 REMARK 465 PHE B 57 REMARK 465 ARG B 58 REMARK 465 ASN B 59 REMARK 465 PRO B 60 REMARK 465 PRO B 61 REMARK 465 ARG B 62 REMARK 465 LYS B 63 REMARK 465 ALA B 64 REMARK 465 SER B 65 REMARK 465 LYS B 66 REMARK 465 ALA B 67 REMARK 465 SER B 68 REMARK 465 LEU B 69 REMARK 465 ASP B 70 REMARK 465 PHE B 71 REMARK 465 ARG B 276 REMARK 465 LYS B 277 REMARK 465 GLY B 278 REMARK 465 PRO B 279 REMARK 465 LEU B 280 REMARK 465 GLU B 281 REMARK 465 ASN B 282 REMARK 465 PRO B 283 REMARK 465 LYS B 284 REMARK 465 ARG B 285 REMARK 465 ARG B 286 REMARK 465 GLU B 287 REMARK 465 LEU B 288 REMARK 465 LEU B 289 REMARK 465 ASP B 290 REMARK 465 GLN B 291 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 G R 8 O3' REMARK 470 GLU E 555 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA N 36 O4' - C1' - N9 ANGL. DEV. = 2.8 DEGREES REMARK 500 DG N 37 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DA N 41 O3' - P - OP2 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP E1151 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 LEU B 80 CA - CB - CG ANGL. DEV. = 16.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU E 462 50.66 -95.74 REMARK 500 SER E 466 -169.55 -112.70 REMARK 500 ALA E 489 34.31 -98.77 REMARK 500 PRO E 590 -177.07 -69.89 REMARK 500 LYS E 595 73.30 56.82 REMARK 500 ASN E 614 -134.08 47.97 REMARK 500 GLU E 982 -113.38 52.96 REMARK 500 PRO E1081 57.08 -92.93 REMARK 500 ILE E1095 -60.57 -97.18 REMARK 500 ASP E1151 32.08 38.99 REMARK 500 LEU B 80 22.18 49.74 REMARK 500 ASN B 103 72.88 51.01 REMARK 500 PHE B 129 52.45 -113.03 REMARK 500 ASP B 155 76.12 47.77 REMARK 500 SER B 216 -122.60 59.24 REMARK 500 ASN B 243 70.61 49.34 REMARK 500 ALA B 257 43.75 -142.48 REMARK 500 ASN B 306 53.76 -90.73 REMARK 500 THR B 309 -168.42 -124.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER E 1148 VAL E 1149 149.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG E 803 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E1302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 922 OD1 REMARK 620 2 ASP E 922 OD2 50.1 REMARK 620 3 GLY E 923 O 126.0 93.0 REMARK 620 4 ATP E1301 O1G 107.3 69.7 88.6 REMARK 620 5 ATP E1301 O2A 101.2 117.2 132.6 71.2 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-48414 RELATED DB: EMDB REMARK 900 STRUCTURE OF THE HUMAN MITOCHONDRIAL LATE-STAGE TRANSCRIPTION REMARK 900 INITIATION COMPLEX, IC8 DBREF 9MN6 N -4 61 PDB 9MN6 9MN6 -4 61 DBREF 9MN6 R 3 8 PDB 9MN6 9MN6 3 8 DBREF 9MN6 T -10 55 PDB 9MN6 9MN6 -10 55 DBREF 9MN6 E 1 1230 UNP O00411 RPOM_HUMAN 1 1230 DBREF 9MN6 B 1 396 UNP Q9H5Q4 TFB2M_HUMAN 1 396 SEQRES 1 N 66 DG DT DG DT DT DA DG DT DT DA DG DG DG SEQRES 2 N 66 DA DG DT DG DA DC DT DG DT DT DA DA DA SEQRES 3 N 66 DA DG DT DG DC DA DT DA DC DC DG DC DC SEQRES 4 N 66 DA DA DG DA DG DA DA DA DA DG DA DA DA SEQRES 5 N 66 DA DC DC DC DA DA DT DT DG DT DG DG DC SEQRES 6 N 66 DC SEQRES 1 R 6 G A A A A G SEQRES 1 T 66 DG DG DC DC DA DC DA DA DT DT DG DG DG SEQRES 2 T 66 DT DT DT DT DC DT DT DT DT DC DT DC DT SEQRES 3 T 66 DT DG DG DC DG DG DT DA DT DG DC DA DC SEQRES 4 T 66 DT DT DT DT DA DA DC DA DG DT DC DA DC SEQRES 5 T 66 DT DC DC DC DT DA DA DC DT DA DA DC DA SEQRES 6 T 66 DC SEQRES 1 E 1230 MET SER ALA LEU CYS TRP GLY ARG GLY ALA ALA GLY LEU SEQRES 2 E 1230 LYS ARG ALA LEU ARG PRO CYS GLY ARG PRO GLY LEU PRO SEQRES 3 E 1230 GLY LYS GLU GLY THR ALA GLY GLY VAL CYS GLY PRO ARG SEQRES 4 E 1230 ARG SER SER SER ALA SER PRO GLN GLU GLN ASP GLN ASP SEQRES 5 E 1230 ARG ARG LYS ASP TRP GLY HIS VAL GLU LEU LEU GLU VAL SEQRES 6 E 1230 LEU GLN ALA ARG VAL ARG GLN LEU GLN ALA GLU SER VAL SEQRES 7 E 1230 SER GLU VAL VAL VAL ASN ARG VAL ASP VAL ALA ARG LEU SEQRES 8 E 1230 PRO GLU CYS GLY SER GLY ASP GLY SER LEU GLN PRO PRO SEQRES 9 E 1230 ARG LYS VAL GLN MET GLY ALA LYS ASP ALA THR PRO VAL SEQRES 10 E 1230 PRO CYS GLY ARG TRP ALA LYS ILE LEU GLU LYS ASP LYS SEQRES 11 E 1230 ARG THR GLN GLN MET ARG MET GLN ARG LEU LYS ALA LYS SEQRES 12 E 1230 LEU GLN MET PRO PHE GLN SER GLY GLU PHE LYS ALA LEU SEQRES 13 E 1230 THR ARG ARG LEU GLN VAL GLU PRO ARG LEU LEU SER LYS SEQRES 14 E 1230 GLN MET ALA GLY CYS LEU GLU ASP CYS THR ARG GLN ALA SEQRES 15 E 1230 PRO GLU SER PRO TRP GLU GLU GLN LEU ALA ARG LEU LEU SEQRES 16 E 1230 GLN GLU ALA PRO GLY LYS LEU SER LEU ASP VAL GLU GLN SEQRES 17 E 1230 ALA PRO SER GLY GLN HIS SER GLN ALA GLN LEU SER GLY SEQRES 18 E 1230 GLN GLN GLN ARG LEU LEU ALA PHE PHE LYS CYS CYS LEU SEQRES 19 E 1230 LEU THR ASP GLN LEU PRO LEU ALA HIS HIS LEU LEU VAL SEQRES 20 E 1230 VAL HIS HIS GLY GLN ARG GLN LYS ARG LYS LEU LEU THR SEQRES 21 E 1230 LEU ASP MET TYR ASN ALA VAL MET LEU GLY TRP ALA ARG SEQRES 22 E 1230 GLN GLY ALA PHE LYS GLU LEU VAL TYR VAL LEU PHE MET SEQRES 23 E 1230 VAL LYS ASP ALA GLY LEU THR PRO ASP LEU LEU SER TYR SEQRES 24 E 1230 ALA ALA ALA LEU GLN CYS MET GLY ARG GLN ASP GLN ASP SEQRES 25 E 1230 ALA GLY THR ILE GLU ARG CYS LEU GLU GLN MET SER GLN SEQRES 26 E 1230 GLU GLY LEU LYS LEU GLN ALA LEU PHE THR ALA VAL LEU SEQRES 27 E 1230 LEU SER GLU GLU ASP ARG ALA THR VAL LEU LYS ALA VAL SEQRES 28 E 1230 HIS LYS VAL LYS PRO THR PHE SER LEU PRO PRO GLN LEU SEQRES 29 E 1230 PRO PRO PRO VAL ASN THR SER LYS LEU LEU ARG ASP VAL SEQRES 30 E 1230 TYR ALA LYS ASP GLY ARG VAL SER TYR PRO LYS LEU HIS SEQRES 31 E 1230 LEU PRO LEU LYS THR LEU GLN CYS LEU PHE GLU LYS GLN SEQRES 32 E 1230 LEU HIS MET GLU LEU ALA SER ARG VAL CYS VAL VAL SER SEQRES 33 E 1230 VAL GLU LYS PRO THR LEU PRO SER LYS GLU VAL LYS HIS SEQRES 34 E 1230 ALA ARG LYS THR LEU LYS THR LEU ARG ASP GLN TRP GLU SEQRES 35 E 1230 LYS ALA LEU CYS ARG ALA LEU ARG GLU THR LYS ASN ARG SEQRES 36 E 1230 LEU GLU ARG GLU VAL TYR GLU GLY ARG PHE SER LEU TYR SEQRES 37 E 1230 PRO PHE LEU CYS LEU LEU ASP GLU ARG GLU VAL VAL ARG SEQRES 38 E 1230 MET LEU LEU GLN VAL LEU GLN ALA LEU PRO ALA GLN GLY SEQRES 39 E 1230 GLU SER PHE THR THR LEU ALA ARG GLU LEU SER ALA ARG SEQRES 40 E 1230 THR PHE SER ARG HIS VAL VAL GLN ARG GLN ARG VAL SER SEQRES 41 E 1230 GLY GLN VAL GLN ALA LEU GLN ASN HIS TYR ARG LYS TYR SEQRES 42 E 1230 LEU CYS LEU LEU ALA SER ASP ALA GLU VAL PRO GLU PRO SEQRES 43 E 1230 CYS LEU PRO ARG GLN TYR TRP GLU GLU LEU GLY ALA PRO SEQRES 44 E 1230 GLU ALA LEU ARG GLU GLN PRO TRP PRO LEU PRO VAL GLN SEQRES 45 E 1230 MET GLU LEU GLY LYS LEU LEU ALA GLU MET LEU VAL GLN SEQRES 46 E 1230 ALA THR GLN MET PRO CYS SER LEU ASP LYS PRO HIS ARG SEQRES 47 E 1230 SER SER ARG LEU VAL PRO VAL LEU TYR HIS VAL TYR SER SEQRES 48 E 1230 PHE ARG ASN VAL GLN GLN ILE GLY ILE LEU LYS PRO HIS SEQRES 49 E 1230 PRO ALA TYR VAL GLN LEU LEU GLU LYS ALA ALA GLU PRO SEQRES 50 E 1230 THR LEU THR PHE GLU ALA VAL ASP VAL PRO MET LEU CYS SEQRES 51 E 1230 PRO PRO LEU PRO TRP THR SER PRO HIS SER GLY ALA PHE SEQRES 52 E 1230 LEU LEU SER PRO THR LYS LEU MET ARG THR VAL GLU GLY SEQRES 53 E 1230 ALA THR GLN HIS GLN GLU LEU LEU GLU THR CYS PRO PRO SEQRES 54 E 1230 THR ALA LEU HIS GLY ALA LEU ASP ALA LEU THR GLN LEU SEQRES 55 E 1230 GLY ASN CYS ALA TRP ARG VAL ASN GLY ARG VAL LEU ASP SEQRES 56 E 1230 LEU VAL LEU GLN LEU PHE GLN ALA LYS GLY CYS PRO GLN SEQRES 57 E 1230 LEU GLY VAL PRO ALA PRO PRO SER GLU ALA PRO GLN PRO SEQRES 58 E 1230 PRO GLU ALA HIS LEU PRO HIS SER ALA ALA PRO ALA ARG SEQRES 59 E 1230 LYS ALA GLU LEU ARG ARG GLU LEU ALA HIS CYS GLN LYS SEQRES 60 E 1230 VAL ALA ARG GLU MET HIS SER LEU ARG ALA GLU ALA LEU SEQRES 61 E 1230 TYR ARG LEU SER LEU ALA GLN HIS LEU ARG ASP ARG VAL SEQRES 62 E 1230 PHE TRP LEU PRO HIS ASN MET ASP PHE ARG GLY ARG THR SEQRES 63 E 1230 TYR PRO CYS PRO PRO HIS PHE ASN HIS LEU GLY SER ASP SEQRES 64 E 1230 VAL ALA ARG ALA LEU LEU GLU PHE ALA GLN GLY ARG PRO SEQRES 65 E 1230 LEU GLY PRO HIS GLY LEU ASP TRP LEU LYS ILE HIS LEU SEQRES 66 E 1230 VAL ASN LEU THR GLY LEU LYS LYS ARG GLU PRO LEU ARG SEQRES 67 E 1230 LYS ARG LEU ALA PHE ALA GLU GLU VAL MET ASP ASP ILE SEQRES 68 E 1230 LEU ASP SER ALA ASP GLN PRO LEU THR GLY ARG LYS TRP SEQRES 69 E 1230 TRP MET GLY ALA GLU GLU PRO TRP GLN THR LEU ALA CYS SEQRES 70 E 1230 CYS MET GLU VAL ALA ASN ALA VAL ARG ALA SER ASP PRO SEQRES 71 E 1230 ALA ALA TYR VAL SER HIS LEU PRO VAL HIS GLN ASP GLY SEQRES 72 E 1230 SER CYS ASN GLY LEU GLN HIS TYR ALA ALA LEU GLY ARG SEQRES 73 E 1230 ASP SER VAL GLY ALA ALA SER VAL ASN LEU GLU PRO SER SEQRES 74 E 1230 ASP VAL PRO GLN ASP VAL TYR SER GLY VAL ALA ALA GLN SEQRES 75 E 1230 VAL GLU VAL PHE ARG ARG GLN ASP ALA GLN ARG GLY MET SEQRES 76 E 1230 ARG VAL ALA GLN VAL LEU GLU GLY PHE ILE THR ARG LYS SEQRES 77 E 1230 VAL VAL LYS GLN THR VAL MET THR VAL VAL TYR GLY VAL SEQRES 78 E 1230 THR ARG TYR GLY GLY ARG LEU GLN ILE GLU LYS ARG LEU SEQRES 79 E 1230 ARG GLU LEU SER ASP PHE PRO GLN GLU PHE VAL TRP GLU SEQRES 80 E 1230 ALA SER HIS TYR LEU VAL ARG GLN VAL PHE LYS SER LEU SEQRES 81 E 1230 GLN GLU MET PHE SER GLY THR ARG ALA ILE GLN HIS TRP SEQRES 82 E 1230 LEU THR GLU SER ALA ARG LEU ILE SER HIS MET GLY SER SEQRES 83 E 1230 VAL VAL GLU TRP VAL THR PRO LEU GLY VAL PRO VAL ILE SEQRES 84 E 1230 GLN PRO TYR ARG LEU ASP SER LYS VAL LYS GLN ILE GLY SEQRES 85 E 1230 GLY GLY ILE GLN SER ILE THR TYR THR HIS ASN GLY ASP SEQRES 86 E 1230 ILE SER ARG LYS PRO ASN THR ARG LYS GLN LYS ASN GLY SEQRES 87 E 1230 PHE PRO PRO ASN PHE ILE HIS SER LEU ASP SER SER HIS SEQRES 88 E 1230 MET MET LEU THR ALA LEU HIS CYS TYR ARG LYS GLY LEU SEQRES 89 E 1230 THR PHE VAL SER VAL HIS ASP CYS TYR TRP THR HIS ALA SEQRES 90 E 1230 ALA ASP VAL SER VAL MET ASN GLN VAL CYS ARG GLU GLN SEQRES 91 E 1230 PHE VAL ARG LEU HIS SER GLU PRO ILE LEU GLN ASP LEU SEQRES 92 E 1230 SER ARG PHE LEU VAL LYS ARG PHE CYS SER GLU PRO GLN SEQRES 93 E 1230 LYS ILE LEU GLU ALA SER GLN LEU LYS GLU THR LEU GLN SEQRES 94 E 1230 ALA VAL PRO LYS PRO GLY ALA PHE ASP LEU GLU GLN VAL SEQRES 95 E 1230 LYS ARG SER THR TYR PHE PHE SER SEQRES 1 B 396 MET TRP ILE PRO VAL VAL GLY LEU PRO ARG ARG LEU ARG SEQRES 2 B 396 LEU SER ALA LEU ALA GLY ALA GLY ARG PHE CYS ILE LEU SEQRES 3 B 396 GLY SER GLU ALA ALA THR ARG LYS HIS LEU PRO ALA ARG SEQRES 4 B 396 ASN HIS CYS GLY LEU SER ASP SER SER PRO GLN LEU TRP SEQRES 5 B 396 PRO GLU PRO ASP PHE ARG ASN PRO PRO ARG LYS ALA SER SEQRES 6 B 396 LYS ALA SER LEU ASP PHE LYS ARG TYR VAL THR ASP ARG SEQRES 7 B 396 ARG LEU ALA GLU THR LEU ALA GLN ILE TYR LEU GLY LYS SEQRES 8 B 396 PRO SER ARG PRO PRO HIS LEU LEU LEU GLU CYS ASN PRO SEQRES 9 B 396 GLY PRO GLY ILE LEU THR GLN ALA LEU LEU GLU ALA GLY SEQRES 10 B 396 ALA LYS VAL VAL ALA LEU GLU SER ASP LYS THR PHE ILE SEQRES 11 B 396 PRO HIS LEU GLU SER LEU GLY LYS ASN LEU ASP GLY LYS SEQRES 12 B 396 LEU ARG VAL ILE HIS CYS ASP PHE PHE LYS LEU ASP PRO SEQRES 13 B 396 ARG SER GLY GLY VAL ILE LYS PRO PRO ALA MET SER SER SEQRES 14 B 396 ARG GLY LEU PHE LYS ASN LEU GLY ILE GLU ALA VAL PRO SEQRES 15 B 396 TRP THR ALA ASP ILE PRO LEU LYS VAL VAL GLY MET PHE SEQRES 16 B 396 PRO SER ARG GLY GLU LYS ARG ALA LEU TRP LYS LEU ALA SEQRES 17 B 396 TYR ASP LEU TYR SER CYS THR SER ILE TYR LYS PHE GLY SEQRES 18 B 396 ARG ILE GLU VAL ASN MET PHE ILE GLY GLU LYS GLU PHE SEQRES 19 B 396 GLN LYS LEU MET ALA ASP PRO GLY ASN PRO ASP LEU TYR SEQRES 20 B 396 HIS VAL LEU SER VAL ILE TRP GLN LEU ALA CYS GLU ILE SEQRES 21 B 396 LYS VAL LEU HIS MET GLU PRO TRP SER SER PHE ASP ILE SEQRES 22 B 396 TYR THR ARG LYS GLY PRO LEU GLU ASN PRO LYS ARG ARG SEQRES 23 B 396 GLU LEU LEU ASP GLN LEU GLN GLN LYS LEU TYR LEU ILE SEQRES 24 B 396 GLN MET ILE PRO ARG GLN ASN LEU PHE THR LYS ASN LEU SEQRES 25 B 396 THR PRO MET ASN TYR ASN ILE PHE PHE HIS LEU LEU LYS SEQRES 26 B 396 HIS CYS PHE GLY ARG ARG SER ALA THR VAL ILE ASP HIS SEQRES 27 B 396 LEU ARG SER LEU THR PRO LEU ASP ALA ARG ASP ILE LEU SEQRES 28 B 396 MET GLN ILE GLY LYS GLN GLU ASP GLU LYS VAL VAL ASN SEQRES 29 B 396 MET HIS PRO GLN ASP PHE LYS THR LEU PHE GLU THR ILE SEQRES 30 B 396 GLU ARG SER LYS ASP CYS ALA TYR LYS TRP LEU TYR ASP SEQRES 31 B 396 GLU THR LEU GLU ASP ARG HET ATP E1301 31 HET MG E1302 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 6 ATP C10 H16 N5 O13 P3 FORMUL 7 MG MG 2+ HELIX 1 AA1 SER E 220 ASP E 237 1 18 HELIX 2 AA2 GLN E 238 GLN E 252 1 15 HELIX 3 AA3 LYS E 255 LEU E 259 5 5 HELIX 4 AA4 THR E 260 GLY E 275 1 16 HELIX 5 AA5 ALA E 276 GLY E 291 1 16 HELIX 6 AA6 ASP E 295 GLN E 309 1 15 HELIX 7 AA7 ASP E 312 GLY E 327 1 16 HELIX 8 AA8 LYS E 329 THR E 335 1 7 HELIX 9 AA9 SER E 340 LYS E 355 1 16 HELIX 10 AB1 PRO E 392 SER E 410 1 19 HELIX 11 AB2 SER E 424 GLU E 462 1 39 HELIX 12 AB3 LEU E 467 CYS E 472 1 6 HELIX 13 AB4 ASP E 475 ALA E 489 1 15 HELIX 14 AB5 PHE E 497 SER E 520 1 24 HELIX 15 AB6 GLY E 521 ALA E 538 1 18 HELIX 16 AB7 LEU E 548 LEU E 556 1 9 HELIX 17 AB8 PRO E 568 THR E 587 1 20 HELIX 18 AB9 HIS E 624 ALA E 635 1 12 HELIX 19 AC1 GLN E 679 CYS E 687 1 9 HELIX 20 AC2 LEU E 692 ASN E 704 1 13 HELIX 21 AC3 ASN E 710 ALA E 723 1 14 HELIX 22 AC4 CYS E 726 GLY E 730 5 5 HELIX 23 AC5 PRO E 734 ALA E 738 5 5 HELIX 24 AC6 ARG E 760 LEU E 789 1 30 HELIX 25 AC7 SER E 818 LEU E 824 1 7 HELIX 26 AC8 GLY E 837 GLY E 850 1 14 HELIX 27 AC9 PRO E 856 VAL E 867 1 12 HELIX 28 AD1 VAL E 867 GLN E 877 1 11 HELIX 29 AD2 TRP E 884 ALA E 888 5 5 HELIX 30 AD3 GLU E 890 ARG E 906 1 17 HELIX 31 AD4 CYS E 925 ARG E 936 1 12 HELIX 32 AD5 VAL E 939 VAL E 944 1 6 HELIX 33 AD6 ASP E 954 ARG E 973 1 20 HELIX 34 AD7 MET E 975 GLU E 982 1 8 HELIX 35 AD8 GLY E 983 ILE E 985 5 3 HELIX 36 AD9 THR E 986 VAL E 998 1 13 HELIX 37 AE1 THR E 1002 GLU E 1016 1 15 HELIX 38 AE2 PRO E 1021 GLU E 1023 5 3 HELIX 39 AE3 PHE E 1024 LEU E 1040 1 17 HELIX 40 AE4 PHE E 1044 MET E 1064 1 21 HELIX 41 AE5 ASN E 1111 ARG E 1141 1 31 HELIX 42 AE6 ASP E 1159 SER E 1176 1 18 HELIX 43 AE7 PRO E 1178 CYS E 1192 1 15 HELIX 44 AE8 GLU E 1194 GLN E 1196 5 3 HELIX 45 AE9 LYS E 1197 GLN E 1209 1 13 HELIX 46 AF1 ASP E 1218 SER E 1225 5 8 HELIX 47 AF2 LEU B 80 GLY B 90 1 11 HELIX 48 AF3 GLY B 107 GLU B 115 1 9 HELIX 49 AF4 ASP B 126 PHE B 129 5 4 HELIX 50 AF5 ILE B 130 LEU B 140 1 11 HELIX 51 AF6 ASP B 150 LEU B 154 5 5 HELIX 52 AF7 SER B 168 LEU B 176 1 9 HELIX 53 AF8 GLY B 199 SER B 213 1 15 HELIX 54 AF9 THR B 215 GLY B 221 5 7 HELIX 55 AG1 HIS B 248 LEU B 256 1 9 HELIX 56 AG2 ARG B 304 PHE B 308 5 5 HELIX 57 AG3 ASN B 316 PHE B 328 1 13 HELIX 58 AG4 THR B 334 THR B 343 1 10 HELIX 59 AG5 ASP B 346 GLY B 355 1 10 HELIX 60 AG6 LYS B 361 MET B 365 5 5 HELIX 61 AG7 HIS B 366 ARG B 379 1 14 HELIX 62 AG8 ASP B 390 ASP B 395 5 6 SHEET 1 AA1 2 ARG E 411 VAL E 415 0 SHEET 2 AA1 2 THR E 638 GLU E 642 -1 O LEU E 639 N VAL E 414 SHEET 1 AA2 3 GLU E 495 SER E 496 0 SHEET 2 AA2 3 GLN E 616 PRO E 623 -1 O LEU E 621 N GLU E 495 SHEET 3 AA2 3 LEU E 606 ARG E 613 -1 N SER E 611 O ILE E 618 SHEET 1 AA3 2 GLN E 588 MET E 589 0 SHEET 2 AA3 2 VAL E 603 PRO E 604 -1 O VAL E 603 N MET E 589 SHEET 1 AA4 3 PHE E 794 TRP E 795 0 SHEET 2 AA4 3 ALA E 706 VAL E 709 -1 N TRP E 707 O PHE E 794 SHEET 3 AA4 3 LEU E 825 PHE E 827 -1 O GLU E 826 N ARG E 708 SHEET 1 AA5 2 HIS E 798 MET E 800 0 SHEET 2 AA5 2 THR E 806 PRO E 808 -1 O TYR E 807 N ASN E 799 SHEET 1 AA6 2 ARG E 831 PRO E 832 0 SHEET 2 AA6 2 VAL E 914 SER E 915 -1 O SER E 915 N ARG E 831 SHEET 1 AA7 4 VAL E1147 VAL E1149 0 SHEET 2 AA7 4 CYS E1152 HIS E1156 -1 O TRP E1154 N VAL E1147 SHEET 3 AA7 4 PRO E 918 GLY E 923 -1 N VAL E 919 O THR E1155 SHEET 4 AA7 4 PHE E1229 SER E1230 -1 O SER E1230 N ASP E 922 SHEET 1 AA8 2 GLU E1069 VAL E1071 0 SHEET 2 AA8 2 PRO E1077 ILE E1079 -1 O VAL E1078 N TRP E1070 SHEET 1 AA9 7 ILE B 147 HIS B 148 0 SHEET 2 AA9 7 VAL B 120 GLU B 124 1 N ALA B 122 O ILE B 147 SHEET 3 AA9 7 LEU B 99 CYS B 102 1 N GLU B 101 O LEU B 123 SHEET 4 AA9 7 LYS B 190 GLY B 193 1 O LYS B 190 N LEU B 100 SHEET 5 AA9 7 GLU B 224 ILE B 229 1 O ASN B 226 N VAL B 191 SHEET 6 AA9 7 LEU B 296 MET B 301 -1 O MET B 301 N VAL B 225 SHEET 7 AA9 7 VAL B 262 GLU B 266 -1 N LEU B 263 O LEU B 298 LINK OD1 ASP E 922 MG MG E1302 1555 1555 2.85 LINK OD2 ASP E 922 MG MG E1302 1555 1555 2.06 LINK O GLY E 923 MG MG E1302 1555 1555 2.02 LINK O1G ATP E1301 MG MG E1302 1555 1555 2.86 LINK O2A ATP E1301 MG MG E1302 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 619 DA N 52 TER 753 G R 8 TER 1366 DC T 28 TER 9320 SER E1230 TER 11828 ARG B 396 HETATM11829 PG ATP E1301 137.719 128.689 162.310 1.00 20.00 P HETATM11830 O1G ATP E1301 138.814 129.696 162.276 1.00 20.00 O HETATM11831 O2G ATP E1301 138.116 127.332 161.722 1.00 20.00 O HETATM11832 O3G ATP E1301 137.121 128.478 163.703 1.00 20.00 O HETATM11833 PB ATP E1301 135.672 130.490 161.077 1.00 20.00 P HETATM11834 O1B ATP E1301 134.278 130.198 160.696 1.00 20.00 O HETATM11835 O2B ATP E1301 135.872 131.460 162.238 1.00 20.00 O HETATM11836 O3B ATP E1301 136.488 129.169 161.414 1.00 20.00 O HETATM11837 PA ATP E1301 137.716 132.029 159.600 1.00 20.00 P HETATM11838 O1A ATP E1301 138.619 131.470 158.575 1.00 20.00 O HETATM11839 O2A ATP E1301 138.367 132.267 160.959 1.00 20.00 O HETATM11840 O3A ATP E1301 136.477 131.070 159.834 1.00 20.00 O HETATM11841 O5' ATP E1301 137.039 133.376 159.130 1.00 20.00 O HETATM11842 C5' ATP E1301 135.609 133.559 159.192 1.00 20.00 C HETATM11843 C4' ATP E1301 135.292 135.024 159.040 1.00 20.00 C HETATM11844 O4' ATP E1301 135.715 135.474 157.739 1.00 20.00 O HETATM11845 C3' ATP E1301 133.813 135.378 159.096 1.00 20.00 C HETATM11846 O3' ATP E1301 133.629 136.740 159.462 1.00 20.00 O HETATM11847 C2' ATP E1301 133.362 135.109 157.658 1.00 20.00 C HETATM11848 O2' ATP E1301 132.283 135.956 157.282 1.00 20.00 O HETATM11849 C1' ATP E1301 134.615 135.464 156.846 1.00 20.00 C HETATM11850 N9 ATP E1301 134.910 134.524 155.772 1.00 20.00 N HETATM11851 C8 ATP E1301 135.970 133.659 155.699 1.00 20.00 C HETATM11852 N7 ATP E1301 135.990 132.925 154.614 1.00 20.00 N HETATM11853 C5 ATP E1301 134.862 133.336 153.922 1.00 20.00 C HETATM11854 C6 ATP E1301 134.308 132.943 152.689 1.00 20.00 C HETATM11855 N6 ATP E1301 134.843 132.007 151.897 1.00 20.00 N HETATM11856 N1 ATP E1301 133.171 133.553 152.287 1.00 20.00 N HETATM11857 C2 ATP E1301 132.631 134.489 153.071 1.00 20.00 C HETATM11858 N3 ATP E1301 133.062 134.941 154.251 1.00 20.00 N HETATM11859 C4 ATP E1301 134.186 134.321 154.624 1.00 20.00 C HETATM11860 MG MG E1302 138.680 132.475 162.945 1.00 20.00 MG CONECT 685611860 CONECT 685711860 CONECT 686111860 CONECT1182911830118311183211836 CONECT118301182911860 CONECT1183111829 CONECT1183211829 CONECT1183311834118351183611840 CONECT1183411833 CONECT1183511833 CONECT118361182911833 CONECT1183711838118391184011841 CONECT1183811837 CONECT118391183711860 CONECT118401183311837 CONECT118411183711842 CONECT118421184111843 CONECT11843118421184411845 CONECT118441184311849 CONECT11845118431184611847 CONECT1184611845 CONECT11847118451184811849 CONECT1184811847 CONECT11849118441184711850 CONECT11850118491185111859 CONECT118511185011852 CONECT118521185111853 CONECT11853118521185411859 CONECT11854118531185511856 CONECT1185511854 CONECT118561185411857 CONECT118571185611858 CONECT118581185711859 CONECT11859118501185311858 CONECT11860 6856 6857 686111830 CONECT1186011839 MASTER 619 0 2 62 27 0 0 611855 5 36 139 END