HEADER GENE REGULATION 30-DEC-24 9MPG TITLE BRD2-BD1 IN COMPLEX WITH CYCLIC PEPTIDE 2.1A COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN-CONTAINING PROTEIN 2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: O27.1.1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 2.1A; COMPND 8 CHAIN: E, F; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRD2, KIAA9001, RING3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630 KEYWDS BRD2, CYCLIC PEPTIDE, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR K.PATEL,J.P.MACKAY,J.L.WALSHE REVDAT 1 08-APR-26 9MPG 0 JRNL AUTH K.PATEL,J.P.MACKAY,J.L.WALSHE JRNL TITL BRD2-BD1 IN COMPLEX WITH CYCLIC PEPTIDE 2.1A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 62591 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 3161 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.8200 - 5.1200 1.00 2670 127 0.2022 0.2323 REMARK 3 2 5.1200 - 4.0600 1.00 2598 145 0.1633 0.1755 REMARK 3 3 4.0600 - 3.5500 1.00 2618 128 0.1630 0.1742 REMARK 3 4 3.5500 - 3.2200 1.00 2607 130 0.1798 0.2051 REMARK 3 5 3.2200 - 2.9900 1.00 2596 124 0.1883 0.2348 REMARK 3 6 2.9900 - 2.8200 1.00 2561 155 0.1830 0.2276 REMARK 3 7 2.8200 - 2.6800 1.00 2622 128 0.1778 0.2223 REMARK 3 8 2.6800 - 2.5600 1.00 2571 123 0.1734 0.2148 REMARK 3 9 2.5600 - 2.4600 1.00 2595 129 0.1753 0.1991 REMARK 3 10 2.4600 - 2.3800 1.00 2577 136 0.1683 0.2168 REMARK 3 11 2.3800 - 2.3000 1.00 2587 142 0.1685 0.2276 REMARK 3 12 2.3000 - 2.2400 1.00 2583 125 0.1749 0.2470 REMARK 3 13 2.2400 - 2.1800 1.00 2620 109 0.1730 0.2651 REMARK 3 14 2.1800 - 2.1200 1.00 2567 150 0.1738 0.2197 REMARK 3 15 2.1200 - 2.0800 1.00 2536 149 0.1795 0.2325 REMARK 3 16 2.0800 - 2.0300 1.00 2591 127 0.1823 0.2173 REMARK 3 17 2.0300 - 1.9900 1.00 2589 128 0.1980 0.2472 REMARK 3 18 1.9900 - 1.9500 1.00 2561 157 0.1997 0.2485 REMARK 3 19 1.9500 - 1.9200 1.00 2536 152 0.2153 0.2597 REMARK 3 20 1.9200 - 1.8900 1.00 2551 145 0.2265 0.2872 REMARK 3 21 1.8900 - 1.8600 1.00 2558 161 0.2326 0.2869 REMARK 3 22 1.8600 - 1.8300 1.00 2537 151 0.2514 0.2869 REMARK 3 23 1.8300 - 1.8000 1.00 2599 140 0.2710 0.3033 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.845 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4394 REMARK 3 ANGLE : 0.942 5929 REMARK 3 CHIRALITY : 0.055 618 REMARK 3 PLANARITY : 0.007 746 REMARK 3 DIHEDRAL : 14.995 1673 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 29 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 64 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9884 -2.3919 -4.9265 REMARK 3 T TENSOR REMARK 3 T11: 0.3543 T22: 0.3252 REMARK 3 T33: 0.3180 T12: 0.1210 REMARK 3 T13: 0.0303 T23: -0.0702 REMARK 3 L TENSOR REMARK 3 L11: 2.7370 L22: 3.3665 REMARK 3 L33: 4.4690 L12: 0.0083 REMARK 3 L13: 1.1527 L23: 0.6904 REMARK 3 S TENSOR REMARK 3 S11: 0.0837 S12: 0.3005 S13: -0.5675 REMARK 3 S21: -0.1245 S22: 0.1791 S23: -0.3756 REMARK 3 S31: 0.4654 S32: 1.1027 S33: -0.2626 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2538 1.7772 13.5231 REMARK 3 T TENSOR REMARK 3 T11: 0.1134 T22: 0.1552 REMARK 3 T33: 0.2093 T12: 0.0048 REMARK 3 T13: 0.0090 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 1.0369 L22: 2.5136 REMARK 3 L33: 3.5629 L12: -0.8534 REMARK 3 L13: 0.9845 L23: -0.5918 REMARK 3 S TENSOR REMARK 3 S11: 0.0754 S12: 0.0538 S13: -0.0102 REMARK 3 S21: -0.1638 S22: -0.0808 S23: -0.1387 REMARK 3 S31: 0.0083 S32: 0.2650 S33: 0.0254 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.8923 -6.3991 8.9548 REMARK 3 T TENSOR REMARK 3 T11: 0.2135 T22: 0.1474 REMARK 3 T33: 0.2013 T12: 0.0556 REMARK 3 T13: 0.0153 T23: -0.0529 REMARK 3 L TENSOR REMARK 3 L11: 2.3126 L22: 4.6147 REMARK 3 L33: 7.9109 L12: 0.3726 REMARK 3 L13: 0.2282 L23: -5.9420 REMARK 3 S TENSOR REMARK 3 S11: -0.0525 S12: 0.2726 S13: -0.1268 REMARK 3 S21: -0.4486 S22: -0.0328 S23: -0.5246 REMARK 3 S31: 0.5275 S32: 0.1958 S33: 0.1717 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 132 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5283 -2.4094 7.9360 REMARK 3 T TENSOR REMARK 3 T11: 0.1436 T22: 0.1688 REMARK 3 T33: 0.1800 T12: 0.0358 REMARK 3 T13: 0.0116 T23: -0.0266 REMARK 3 L TENSOR REMARK 3 L11: 0.2642 L22: 3.7640 REMARK 3 L33: 6.7556 L12: -0.0802 REMARK 3 L13: 0.7320 L23: -4.1984 REMARK 3 S TENSOR REMARK 3 S11: -0.0089 S12: -0.0017 S13: 0.0255 REMARK 3 S21: -0.0948 S22: -0.0317 S23: 0.0141 REMARK 3 S31: 0.1269 S32: 0.0477 S33: 0.0409 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 156 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3595 -8.4659 28.0063 REMARK 3 T TENSOR REMARK 3 T11: 0.4145 T22: 0.2721 REMARK 3 T33: 0.2220 T12: -0.0131 REMARK 3 T13: 0.0413 T23: 0.0432 REMARK 3 L TENSOR REMARK 3 L11: 9.2056 L22: 8.3150 REMARK 3 L33: 1.9471 L12: 7.4284 REMARK 3 L13: -4.1496 L23: -2.9288 REMARK 3 S TENSOR REMARK 3 S11: 0.2996 S12: -0.8663 S13: -0.3356 REMARK 3 S21: 1.6151 S22: -0.3370 S23: 0.1740 REMARK 3 S31: 1.1188 S32: 0.1176 S33: 0.0241 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4103 4.8480 19.0157 REMARK 3 T TENSOR REMARK 3 T11: 0.2290 T22: 0.1630 REMARK 3 T33: 0.1678 T12: 0.0550 REMARK 3 T13: -0.0273 T23: -0.0556 REMARK 3 L TENSOR REMARK 3 L11: 7.9309 L22: 5.5438 REMARK 3 L33: 7.3217 L12: -5.1053 REMARK 3 L13: 3.4727 L23: -4.9549 REMARK 3 S TENSOR REMARK 3 S11: 0.0702 S12: -0.1205 S13: 0.3180 REMARK 3 S21: 0.0598 S22: -0.1304 S23: -0.2551 REMARK 3 S31: -0.4870 S32: -0.1516 S33: 0.0433 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 180 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5950 11.7862 -2.8441 REMARK 3 T TENSOR REMARK 3 T11: 0.5001 T22: 0.2775 REMARK 3 T33: 0.2922 T12: 0.1214 REMARK 3 T13: -0.0701 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 4.1778 L22: 6.8737 REMARK 3 L33: 7.0447 L12: -3.2434 REMARK 3 L13: 2.3840 L23: 3.1260 REMARK 3 S TENSOR REMARK 3 S11: -0.0543 S12: -0.2276 S13: 0.3252 REMARK 3 S21: -0.2207 S22: 0.1056 S23: 0.2863 REMARK 3 S31: -1.7980 S32: -0.8753 S33: -0.1264 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 64 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2276 8.9406 10.5046 REMARK 3 T TENSOR REMARK 3 T11: 0.4730 T22: 0.5892 REMARK 3 T33: 0.5596 T12: 0.1523 REMARK 3 T13: -0.2162 T23: -0.1105 REMARK 3 L TENSOR REMARK 3 L11: 6.5450 L22: 7.8847 REMARK 3 L33: 3.5799 L12: -1.0653 REMARK 3 L13: -4.7826 L23: -0.0298 REMARK 3 S TENSOR REMARK 3 S11: 0.1377 S12: 0.2735 S13: 0.2824 REMARK 3 S21: -0.4666 S22: -0.1176 S23: 0.9858 REMARK 3 S31: -1.2182 S32: -0.6560 S33: -0.3428 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 77 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.2145 7.0466 24.8624 REMARK 3 T TENSOR REMARK 3 T11: 0.1276 T22: 0.2150 REMARK 3 T33: 0.2020 T12: -0.0245 REMARK 3 T13: -0.0202 T23: -0.0037 REMARK 3 L TENSOR REMARK 3 L11: 1.2814 L22: 1.9118 REMARK 3 L33: 4.5324 L12: -0.5621 REMARK 3 L13: -0.5553 L23: 1.5091 REMARK 3 S TENSOR REMARK 3 S11: -0.0108 S12: 0.2245 S13: -0.0352 REMARK 3 S21: -0.1793 S22: -0.1671 S23: 0.2270 REMARK 3 S31: -0.2237 S32: -0.3293 S33: 0.1632 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 161 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2572 0.5750 19.0986 REMARK 3 T TENSOR REMARK 3 T11: 0.1014 T22: 0.1816 REMARK 3 T33: 0.1756 T12: -0.0255 REMARK 3 T13: -0.0165 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 1.4800 L22: 2.2236 REMARK 3 L33: 0.8563 L12: -0.4421 REMARK 3 L13: -1.0694 L23: -0.1172 REMARK 3 S TENSOR REMARK 3 S11: 0.0431 S12: 0.2083 S13: -0.1574 REMARK 3 S21: -0.1811 S22: -0.0259 S23: 0.1744 REMARK 3 S31: 0.1225 S32: -0.1397 S33: -0.0563 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 74 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.4628 -18.6291 2.1294 REMARK 3 T TENSOR REMARK 3 T11: 0.4362 T22: 0.3949 REMARK 3 T33: 0.3243 T12: -0.1690 REMARK 3 T13: -0.0742 T23: 0.0444 REMARK 3 L TENSOR REMARK 3 L11: 4.1865 L22: 7.6938 REMARK 3 L33: 7.4805 L12: -1.4513 REMARK 3 L13: -5.4416 L23: 0.4241 REMARK 3 S TENSOR REMARK 3 S11: 0.1989 S12: -1.0397 S13: 0.2069 REMARK 3 S21: 0.8717 S22: -0.1388 S23: -0.3652 REMARK 3 S31: 0.4025 S32: 0.5805 S33: -0.0535 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 85 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8804 -17.6949 -8.9677 REMARK 3 T TENSOR REMARK 3 T11: 0.3511 T22: 0.2172 REMARK 3 T33: 0.2755 T12: -0.0416 REMARK 3 T13: -0.0276 T23: 0.0248 REMARK 3 L TENSOR REMARK 3 L11: 9.8608 L22: 8.7530 REMARK 3 L33: 5.0261 L12: 8.1376 REMARK 3 L13: -6.9378 L23: -6.2687 REMARK 3 S TENSOR REMARK 3 S11: 0.2277 S12: -0.0481 S13: -0.0893 REMARK 3 S21: 0.5287 S22: -0.2139 S23: -0.2019 REMARK 3 S31: 0.2835 S32: 0.2756 S33: 0.0068 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 92 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.2340 -12.9223 -18.0064 REMARK 3 T TENSOR REMARK 3 T11: 0.2123 T22: 0.2199 REMARK 3 T33: 0.2762 T12: -0.0294 REMARK 3 T13: 0.0351 T23: -0.0462 REMARK 3 L TENSOR REMARK 3 L11: 2.0315 L22: 9.9595 REMARK 3 L33: 5.2873 L12: -1.4972 REMARK 3 L13: 0.4572 L23: -1.8434 REMARK 3 S TENSOR REMARK 3 S11: -0.0250 S12: 0.2677 S13: -0.3108 REMARK 3 S21: -0.2474 S22: -0.0764 S23: -0.1978 REMARK 3 S31: 0.5532 S32: -0.0434 S33: 0.0620 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 100 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0849 2.2615 -15.8607 REMARK 3 T TENSOR REMARK 3 T11: 0.1507 T22: 0.1220 REMARK 3 T33: 0.1245 T12: 0.0012 REMARK 3 T13: 0.0027 T23: -0.0131 REMARK 3 L TENSOR REMARK 3 L11: 3.6571 L22: 6.4514 REMARK 3 L33: 4.8043 L12: 4.5783 REMARK 3 L13: -0.6386 L23: -2.2726 REMARK 3 S TENSOR REMARK 3 S11: 0.2399 S12: -0.0944 S13: -0.0974 REMARK 3 S21: 0.1962 S22: -0.2273 S23: -0.1344 REMARK 3 S31: 0.1634 S32: 0.1076 S33: 0.0234 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 113 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0447 4.0200 -10.4997 REMARK 3 T TENSOR REMARK 3 T11: 0.3178 T22: 0.2156 REMARK 3 T33: 0.2627 T12: -0.0238 REMARK 3 T13: 0.0643 T23: -0.0242 REMARK 3 L TENSOR REMARK 3 L11: 4.1864 L22: 5.6699 REMARK 3 L33: 4.9065 L12: -2.0757 REMARK 3 L13: 1.5952 L23: -5.2572 REMARK 3 S TENSOR REMARK 3 S11: 0.1737 S12: -0.2661 S13: 0.2737 REMARK 3 S21: 0.9020 S22: -0.2171 S23: 0.1140 REMARK 3 S31: -0.6524 S32: -0.2415 S33: 0.0574 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 123 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0900 -9.9466 -2.8179 REMARK 3 T TENSOR REMARK 3 T11: 0.3507 T22: 0.3230 REMARK 3 T33: 0.3127 T12: -0.1548 REMARK 3 T13: -0.0405 T23: 0.0460 REMARK 3 L TENSOR REMARK 3 L11: 6.8801 L22: 8.8012 REMARK 3 L33: 6.6608 L12: -4.8084 REMARK 3 L13: -0.1393 L23: -5.0092 REMARK 3 S TENSOR REMARK 3 S11: 0.2284 S12: -0.8562 S13: -0.6253 REMARK 3 S21: 0.5007 S22: -0.1076 S23: -0.2620 REMARK 3 S31: -0.0374 S32: 0.3727 S33: -0.1070 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 132 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8640 -9.7938 5.4536 REMARK 3 T TENSOR REMARK 3 T11: 0.5598 T22: 0.4278 REMARK 3 T33: 0.2616 T12: -0.2550 REMARK 3 T13: -0.0216 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 5.4138 L22: 6.1075 REMARK 3 L33: 8.5218 L12: -0.0735 REMARK 3 L13: -5.6584 L23: -1.1841 REMARK 3 S TENSOR REMARK 3 S11: 0.2654 S12: -0.6286 S13: 0.0689 REMARK 3 S21: 0.8470 S22: -0.1986 S23: -0.2934 REMARK 3 S31: 0.1035 S32: -0.2013 S33: -0.0568 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 138 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9435 -5.4618 -9.7243 REMARK 3 T TENSOR REMARK 3 T11: 0.2151 T22: 0.2197 REMARK 3 T33: 0.2512 T12: -0.0761 REMARK 3 T13: 0.0357 T23: -0.0498 REMARK 3 L TENSOR REMARK 3 L11: 2.2665 L22: 5.3148 REMARK 3 L33: 9.2939 L12: 0.7004 REMARK 3 L13: -0.3236 L23: -5.4142 REMARK 3 S TENSOR REMARK 3 S11: 0.1735 S12: -0.0786 S13: -0.0949 REMARK 3 S21: 0.1732 S22: 0.0341 S23: 0.4003 REMARK 3 S31: 0.3319 S32: -0.6107 S33: -0.2330 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 156 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6547 -1.0582 -25.8371 REMARK 3 T TENSOR REMARK 3 T11: 0.3864 T22: 0.2815 REMARK 3 T33: 0.2698 T12: 0.0253 REMARK 3 T13: -0.0903 T23: -0.0304 REMARK 3 L TENSOR REMARK 3 L11: 9.5669 L22: 4.5714 REMARK 3 L33: 6.1089 L12: 2.3061 REMARK 3 L13: 5.8611 L23: 4.5935 REMARK 3 S TENSOR REMARK 3 S11: 0.1611 S12: 0.7896 S13: -0.2440 REMARK 3 S21: -1.3735 S22: -0.0773 S23: 0.4754 REMARK 3 S31: -0.8194 S32: 0.3820 S33: -0.0250 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 161 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.8385 -14.0872 -16.5645 REMARK 3 T TENSOR REMARK 3 T11: 0.1847 T22: 0.1870 REMARK 3 T33: 0.2073 T12: -0.0361 REMARK 3 T13: -0.0223 T23: -0.0614 REMARK 3 L TENSOR REMARK 3 L11: 5.1582 L22: 7.4109 REMARK 3 L33: 8.1576 L12: 3.8655 REMARK 3 L13: -2.8255 L23: -5.2619 REMARK 3 S TENSOR REMARK 3 S11: 0.0639 S12: 0.2791 S13: -0.2296 REMARK 3 S21: -0.1788 S22: 0.0926 S23: 0.2634 REMARK 3 S31: 0.5593 S32: -0.2170 S33: -0.1663 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 180 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5791 -20.2405 4.7556 REMARK 3 T TENSOR REMARK 3 T11: 0.6017 T22: 0.4744 REMARK 3 T33: 0.3334 T12: -0.2112 REMARK 3 T13: -0.0113 T23: 0.0445 REMARK 3 L TENSOR REMARK 3 L11: 9.6888 L22: 5.5603 REMARK 3 L33: 2.5654 L12: 0.9369 REMARK 3 L13: 0.7725 L23: 3.7741 REMARK 3 S TENSOR REMARK 3 S11: 0.1001 S12: -0.4914 S13: 0.1787 REMARK 3 S21: 0.4193 S22: -0.0798 S23: 0.3432 REMARK 3 S31: 1.5551 S32: -1.2764 S33: -0.0660 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 72 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9442 30.2282 11.9853 REMARK 3 T TENSOR REMARK 3 T11: 0.2233 T22: 0.2989 REMARK 3 T33: 0.3380 T12: 0.0054 REMARK 3 T13: 0.0949 T23: 0.0494 REMARK 3 L TENSOR REMARK 3 L11: 4.6460 L22: 4.7066 REMARK 3 L33: 8.3014 L12: 1.0209 REMARK 3 L13: -0.0600 L23: 0.5148 REMARK 3 S TENSOR REMARK 3 S11: 0.3163 S12: 0.4501 S13: 0.1794 REMARK 3 S21: -0.5314 S22: 0.0953 S23: -0.6982 REMARK 3 S31: -0.3653 S32: 0.8432 S33: -0.3634 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 92 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.0893 24.8638 32.9202 REMARK 3 T TENSOR REMARK 3 T11: 0.2248 T22: 0.2359 REMARK 3 T33: 0.2625 T12: -0.0948 REMARK 3 T13: -0.0481 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 5.4412 L22: 8.9478 REMARK 3 L33: 5.2235 L12: -2.3491 REMARK 3 L13: 0.3218 L23: 1.9229 REMARK 3 S TENSOR REMARK 3 S11: 0.0112 S12: -0.1384 S13: 0.1189 REMARK 3 S21: 0.5012 S22: -0.0711 S23: -0.5082 REMARK 3 S31: 0.3826 S32: 0.2541 S33: 0.0813 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 113 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.4476 18.5712 23.5977 REMARK 3 T TENSOR REMARK 3 T11: 0.2625 T22: 0.1959 REMARK 3 T33: 0.2405 T12: -0.0476 REMARK 3 T13: -0.0410 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 7.9067 L22: 7.4957 REMARK 3 L33: 3.5709 L12: 3.0273 REMARK 3 L13: -4.2148 L23: -4.3370 REMARK 3 S TENSOR REMARK 3 S11: -0.1361 S12: -0.1440 S13: -0.3020 REMARK 3 S21: 0.5115 S22: -0.2035 S23: -0.7946 REMARK 3 S31: 0.0795 S32: 0.2412 S33: 0.4718 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 132 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0358 20.3584 18.4597 REMARK 3 T TENSOR REMARK 3 T11: 0.1568 T22: 0.1587 REMARK 3 T33: 0.2033 T12: -0.0224 REMARK 3 T13: -0.0023 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 3.5921 L22: 4.0565 REMARK 3 L33: 7.5377 L12: 1.1320 REMARK 3 L13: -3.5936 L23: -2.7570 REMARK 3 S TENSOR REMARK 3 S11: 0.1926 S12: 0.1400 S13: 0.1257 REMARK 3 S21: -0.2905 S22: -0.0430 S23: -0.1564 REMARK 3 S31: 0.2530 S32: 0.0438 S33: -0.1941 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 156 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2565 28.6276 27.2428 REMARK 3 T TENSOR REMARK 3 T11: 0.1421 T22: 0.2114 REMARK 3 T33: 0.2080 T12: -0.0759 REMARK 3 T13: -0.0083 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 1.0867 L22: 0.8821 REMARK 3 L33: 6.1304 L12: -0.9216 REMARK 3 L13: 0.8270 L23: -0.0181 REMARK 3 S TENSOR REMARK 3 S11: 0.0795 S12: -0.1826 S13: 0.0727 REMARK 3 S21: 0.0911 S22: -0.0075 S23: 0.0284 REMARK 3 S31: 0.1765 S32: -0.5535 S33: -0.1110 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 180 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4638 28.7223 2.3181 REMARK 3 T TENSOR REMARK 3 T11: 0.4959 T22: 0.5036 REMARK 3 T33: 0.3596 T12: 0.1078 REMARK 3 T13: 0.0869 T23: 0.1117 REMARK 3 L TENSOR REMARK 3 L11: 5.6943 L22: 3.8457 REMARK 3 L33: 7.9715 L12: -4.6641 REMARK 3 L13: -5.9749 L23: 5.1180 REMARK 3 S TENSOR REMARK 3 S11: 0.5568 S12: 0.7551 S13: -0.2136 REMARK 3 S21: -0.9339 S22: -0.5736 S23: -0.0006 REMARK 3 S31: -0.4876 S32: -0.0922 S33: -0.0212 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3700 1.6600 -24.7577 REMARK 3 T TENSOR REMARK 3 T11: 0.1108 T22: 0.1289 REMARK 3 T33: 0.1124 T12: -0.0047 REMARK 3 T13: 0.0254 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 6.1789 L22: 8.2846 REMARK 3 L33: 6.2260 L12: 1.7480 REMARK 3 L13: -0.5570 L23: -3.4166 REMARK 3 S TENSOR REMARK 3 S11: -0.0466 S12: -0.0989 S13: -0.1531 REMARK 3 S21: -0.0026 S22: -0.0568 S23: -0.0486 REMARK 3 S31: 0.2857 S32: -0.0358 S33: 0.1008 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.6036 -10.1239 26.8109 REMARK 3 T TENSOR REMARK 3 T11: 0.1815 T22: 0.1576 REMARK 3 T33: 0.1637 T12: 0.0585 REMARK 3 T13: -0.0086 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 9.4127 L22: 5.9899 REMARK 3 L33: 7.4479 L12: -1.3829 REMARK 3 L13: 1.6176 L23: -5.3749 REMARK 3 S TENSOR REMARK 3 S11: -0.1174 S12: -0.0920 S13: 0.0014 REMARK 3 S21: -0.0014 S22: -0.0967 S23: -0.2786 REMARK 3 S31: 0.0008 S32: 0.2077 S33: 0.2142 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9MPG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-DEC-24. REMARK 100 THE DEPOSITION ID IS D_1000291505. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.953735 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62636 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 48.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.91800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PH 5.5, 25% W/V REMARK 280 POLYETHYLENE GLYCOL 3,350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 40.77150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 48.88460 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -40.77150 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 67.73485 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 13.21540 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -67.73485 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 60 REMARK 465 PRO A 61 REMARK 465 LEU A 62 REMARK 465 GLY A 63 REMARK 465 VAL A 189 REMARK 465 THR A 190 REMARK 465 ILE A 191 REMARK 465 PRO A 192 REMARK 465 LYS A 193 REMARK 465 ASN A 194 REMARK 465 GLN B 60 REMARK 465 PRO B 61 REMARK 465 LEU B 62 REMARK 465 GLY B 63 REMARK 465 SER B 67 REMARK 465 ASN B 68 REMARK 465 PRO B 69 REMARK 465 VAL B 189 REMARK 465 THR B 190 REMARK 465 ILE B 191 REMARK 465 PRO B 192 REMARK 465 LYS B 193 REMARK 465 ASN B 194 REMARK 465 GLN C 60 REMARK 465 PRO C 61 REMARK 465 LEU C 62 REMARK 465 GLY C 63 REMARK 465 SER C 64 REMARK 465 GLU C 65 REMARK 465 VAL C 66 REMARK 465 SER C 67 REMARK 465 ASN C 68 REMARK 465 PRO C 69 REMARK 465 LYS C 70 REMARK 465 LYS C 71 REMARK 465 PRO C 72 REMARK 465 GLY C 73 REMARK 465 VAL C 188 REMARK 465 VAL C 189 REMARK 465 THR C 190 REMARK 465 ILE C 191 REMARK 465 PRO C 192 REMARK 465 LYS C 193 REMARK 465 ASN C 194 REMARK 465 GLN D 60 REMARK 465 PRO D 61 REMARK 465 LEU D 62 REMARK 465 GLY D 63 REMARK 465 SER D 64 REMARK 465 GLU D 65 REMARK 465 VAL D 66 REMARK 465 SER D 67 REMARK 465 ASN D 68 REMARK 465 PRO D 69 REMARK 465 LYS D 70 REMARK 465 LYS D 71 REMARK 465 VAL D 188 REMARK 465 VAL D 189 REMARK 465 THR D 190 REMARK 465 ILE D 191 REMARK 465 PRO D 192 REMARK 465 LYS D 193 REMARK 465 ASN D 194 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 92 CG CD CE NZ REMARK 480 GLN A 94 CG CD OE1 NE2 REMARK 480 GLN A 119 CG CD OE1 NE2 REMARK 480 GLU B 65 CG CD OE1 OE2 REMARK 480 LYS B 70 CB CG CD CE NZ REMARK 480 PRO B 72 CG CD REMARK 480 LYS B 88 CD CE NZ REMARK 480 LYS B 92 CE NZ REMARK 480 ARG B 128 CD NE CZ NH1 NH2 REMARK 480 GLN B 175 CD OE1 NE2 REMARK 480 LYS C 84 CG CD CE NZ REMARK 480 GLN D 185 CG CD OE1 NE2 REMARK 480 ALY E 5 OH CH CH3 NZ REMARK 480 LYS E 13 CE NZ REMARK 480 LYS F 2 CD CE NZ REMARK 480 LYS F 13 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 358 O HOH B 396 2.08 REMARK 500 O HOH B 345 O HOH B 391 2.09 REMARK 500 O HOH D 272 O HOH D 282 2.13 REMARK 500 O HOH C 329 O HOH C 352 2.13 REMARK 500 O HOH B 370 O HOH B 379 2.17 REMARK 500 O HOH B 385 O HOH B 390 2.18 REMARK 500 O HOH D 252 O HOH D 278 2.18 REMARK 500 O HOH B 373 O HOH B 395 2.19 REMARK 500 O HOH B 373 O HOH B 387 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 391 O HOH C 383 1556 2.14 REMARK 500 O HOH B 391 O HOH E 103 1556 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 110 71.33 -117.55 REMARK 500 GLU A 183 83.46 70.85 REMARK 500 LEU D 110 79.95 -114.12 REMARK 500 REMARK 500 REMARK: NULL DBREF 9MPG A 65 194 UNP P25440 BRD2_HUMAN 65 194 DBREF 9MPG B 65 194 UNP P25440 BRD2_HUMAN 65 194 DBREF 9MPG C 65 194 UNP P25440 BRD2_HUMAN 65 194 DBREF 9MPG D 65 194 UNP P25440 BRD2_HUMAN 65 194 DBREF 9MPG E 0 17 PDB 9MPG 9MPG 0 17 DBREF 9MPG F 0 17 PDB 9MPG 9MPG 0 17 SEQADV 9MPG GLN A 60 UNP P25440 EXPRESSION TAG SEQADV 9MPG PRO A 61 UNP P25440 EXPRESSION TAG SEQADV 9MPG LEU A 62 UNP P25440 EXPRESSION TAG SEQADV 9MPG GLY A 63 UNP P25440 EXPRESSION TAG SEQADV 9MPG SER A 64 UNP P25440 EXPRESSION TAG SEQADV 9MPG GLN B 60 UNP P25440 EXPRESSION TAG SEQADV 9MPG PRO B 61 UNP P25440 EXPRESSION TAG SEQADV 9MPG LEU B 62 UNP P25440 EXPRESSION TAG SEQADV 9MPG GLY B 63 UNP P25440 EXPRESSION TAG SEQADV 9MPG SER B 64 UNP P25440 EXPRESSION TAG SEQADV 9MPG GLN C 60 UNP P25440 EXPRESSION TAG SEQADV 9MPG PRO C 61 UNP P25440 EXPRESSION TAG SEQADV 9MPG LEU C 62 UNP P25440 EXPRESSION TAG SEQADV 9MPG GLY C 63 UNP P25440 EXPRESSION TAG SEQADV 9MPG SER C 64 UNP P25440 EXPRESSION TAG SEQADV 9MPG GLN D 60 UNP P25440 EXPRESSION TAG SEQADV 9MPG PRO D 61 UNP P25440 EXPRESSION TAG SEQADV 9MPG LEU D 62 UNP P25440 EXPRESSION TAG SEQADV 9MPG GLY D 63 UNP P25440 EXPRESSION TAG SEQADV 9MPG SER D 64 UNP P25440 EXPRESSION TAG SEQRES 1 A 135 GLN PRO LEU GLY SER GLU VAL SER ASN PRO LYS LYS PRO SEQRES 2 A 135 GLY ARG VAL THR ASN GLN LEU GLN TYR LEU HIS LYS VAL SEQRES 3 A 135 VAL MET LYS ALA LEU TRP LYS HIS GLN PHE ALA TRP PRO SEQRES 4 A 135 PHE ARG GLN PRO VAL ASP ALA VAL LYS LEU GLY LEU PRO SEQRES 5 A 135 ASP TYR HIS LYS ILE ILE LYS GLN PRO MET ASP MET GLY SEQRES 6 A 135 THR ILE LYS ARG ARG LEU GLU ASN ASN TYR TYR TRP ALA SEQRES 7 A 135 ALA SER GLU CYS MET GLN ASP PHE ASN THR MET PHE THR SEQRES 8 A 135 ASN CYS TYR ILE TYR ASN LYS PRO THR ASP ASP ILE VAL SEQRES 9 A 135 LEU MET ALA GLN THR LEU GLU LYS ILE PHE LEU GLN LYS SEQRES 10 A 135 VAL ALA SER MET PRO GLN GLU GLU GLN GLU LEU VAL VAL SEQRES 11 A 135 THR ILE PRO LYS ASN SEQRES 1 B 135 GLN PRO LEU GLY SER GLU VAL SER ASN PRO LYS LYS PRO SEQRES 2 B 135 GLY ARG VAL THR ASN GLN LEU GLN TYR LEU HIS LYS VAL SEQRES 3 B 135 VAL MET LYS ALA LEU TRP LYS HIS GLN PHE ALA TRP PRO SEQRES 4 B 135 PHE ARG GLN PRO VAL ASP ALA VAL LYS LEU GLY LEU PRO SEQRES 5 B 135 ASP TYR HIS LYS ILE ILE LYS GLN PRO MET ASP MET GLY SEQRES 6 B 135 THR ILE LYS ARG ARG LEU GLU ASN ASN TYR TYR TRP ALA SEQRES 7 B 135 ALA SER GLU CYS MET GLN ASP PHE ASN THR MET PHE THR SEQRES 8 B 135 ASN CYS TYR ILE TYR ASN LYS PRO THR ASP ASP ILE VAL SEQRES 9 B 135 LEU MET ALA GLN THR LEU GLU LYS ILE PHE LEU GLN LYS SEQRES 10 B 135 VAL ALA SER MET PRO GLN GLU GLU GLN GLU LEU VAL VAL SEQRES 11 B 135 THR ILE PRO LYS ASN SEQRES 1 C 135 GLN PRO LEU GLY SER GLU VAL SER ASN PRO LYS LYS PRO SEQRES 2 C 135 GLY ARG VAL THR ASN GLN LEU GLN TYR LEU HIS LYS VAL SEQRES 3 C 135 VAL MET LYS ALA LEU TRP LYS HIS GLN PHE ALA TRP PRO SEQRES 4 C 135 PHE ARG GLN PRO VAL ASP ALA VAL LYS LEU GLY LEU PRO SEQRES 5 C 135 ASP TYR HIS LYS ILE ILE LYS GLN PRO MET ASP MET GLY SEQRES 6 C 135 THR ILE LYS ARG ARG LEU GLU ASN ASN TYR TYR TRP ALA SEQRES 7 C 135 ALA SER GLU CYS MET GLN ASP PHE ASN THR MET PHE THR SEQRES 8 C 135 ASN CYS TYR ILE TYR ASN LYS PRO THR ASP ASP ILE VAL SEQRES 9 C 135 LEU MET ALA GLN THR LEU GLU LYS ILE PHE LEU GLN LYS SEQRES 10 C 135 VAL ALA SER MET PRO GLN GLU GLU GLN GLU LEU VAL VAL SEQRES 11 C 135 THR ILE PRO LYS ASN SEQRES 1 D 135 GLN PRO LEU GLY SER GLU VAL SER ASN PRO LYS LYS PRO SEQRES 2 D 135 GLY ARG VAL THR ASN GLN LEU GLN TYR LEU HIS LYS VAL SEQRES 3 D 135 VAL MET LYS ALA LEU TRP LYS HIS GLN PHE ALA TRP PRO SEQRES 4 D 135 PHE ARG GLN PRO VAL ASP ALA VAL LYS LEU GLY LEU PRO SEQRES 5 D 135 ASP TYR HIS LYS ILE ILE LYS GLN PRO MET ASP MET GLY SEQRES 6 D 135 THR ILE LYS ARG ARG LEU GLU ASN ASN TYR TYR TRP ALA SEQRES 7 D 135 ALA SER GLU CYS MET GLN ASP PHE ASN THR MET PHE THR SEQRES 8 D 135 ASN CYS TYR ILE TYR ASN LYS PRO THR ASP ASP ILE VAL SEQRES 9 D 135 LEU MET ALA GLN THR LEU GLU LYS ILE PHE LEU GLN LYS SEQRES 10 D 135 VAL ALA SER MET PRO GLN GLU GLU GLN GLU LEU VAL VAL SEQRES 11 D 135 THR ILE PRO LYS ASN SEQRES 1 E 18 ACE TRP LYS TYR LEU ALY ILE GLY ALY GLY ASN PRO TRP SEQRES 2 E 18 LYS SER GLN CYS NH2 SEQRES 1 F 18 ACE TRP LYS TYR LEU ALY ILE GLY ALY GLY ASN PRO TRP SEQRES 2 F 18 LYS SER GLN CYS NH2 HET ACE E 0 3 HET ALY E 5 12 HET ALY E 8 12 HET NH2 E 17 1 HET ACE F 0 3 HET ALY F 5 12 HET ALY F 8 12 HET NH2 F 17 1 HET GOL A 201 6 HET GOL B 201 6 HET GOL C 201 6 HETNAM ACE ACETYL GROUP HETNAM ALY N(6)-ACETYLLYSINE HETNAM NH2 AMINO GROUP HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 ACE 2(C2 H4 O) FORMUL 5 ALY 4(C8 H16 N2 O3) FORMUL 5 NH2 2(H2 N) FORMUL 7 GOL 3(C3 H8 O3) FORMUL 10 HOH *435(H2 O) HELIX 1 AA1 THR A 76 VAL A 85 1 10 HELIX 2 AA2 VAL A 85 HIS A 93 1 9 HELIX 3 AA3 ALA A 96 ARG A 100 5 5 HELIX 4 AA4 ASP A 112 ILE A 117 1 6 HELIX 5 AA5 ASP A 122 ASN A 132 1 11 HELIX 6 AA6 ALA A 137 ASN A 156 1 20 HELIX 7 AA7 ASP A 160 SER A 179 1 20 HELIX 8 AA8 THR B 76 VAL B 85 1 10 HELIX 9 AA9 VAL B 85 LYS B 92 1 8 HELIX 10 AB1 ALA B 96 ARG B 100 5 5 HELIX 11 AB2 ASP B 104 GLY B 109 1 6 HELIX 12 AB3 ASP B 112 ILE B 117 1 6 HELIX 13 AB4 ASP B 122 ASN B 132 1 11 HELIX 14 AB5 ALA B 137 ASN B 156 1 20 HELIX 15 AB6 ASP B 160 ALA B 178 1 19 HELIX 16 AB7 THR C 76 VAL C 85 1 10 HELIX 17 AB8 VAL C 85 LYS C 92 1 8 HELIX 18 AB9 ALA C 96 ARG C 100 5 5 HELIX 19 AC1 ASP C 112 ILE C 117 1 6 HELIX 20 AC2 ASP C 122 ASN C 132 1 11 HELIX 21 AC3 ALA C 137 ASN C 156 1 20 HELIX 22 AC4 ASP C 160 ALA C 178 1 19 HELIX 23 AC5 THR D 76 VAL D 85 1 10 HELIX 24 AC6 VAL D 85 LYS D 92 1 8 HELIX 25 AC7 ALA D 96 ARG D 100 5 5 HELIX 26 AC8 ASP D 112 ILE D 117 1 6 HELIX 27 AC9 ASP D 122 ASN D 132 1 11 HELIX 28 AD1 ALA D 137 ASN D 156 1 20 HELIX 29 AD2 ASP D 160 ALA D 178 1 19 HELIX 30 AD3 TYR E 3 GLY E 7 5 5 HELIX 31 AD4 TRP F 1 ILE F 6 1 6 LINK C ACE E 0 N TRP E 1 1555 1555 1.33 LINK CH3 ACE E 0 SG CYS E 16 1555 1555 1.79 LINK C LEU E 4 N ALY E 5 1555 1555 1.34 LINK C ALY E 5 N ILE E 6 1555 1555 1.34 LINK C GLY E 7 N ALY E 8 1555 1555 1.33 LINK C ALY E 8 N GLY E 9 1555 1555 1.33 LINK C CYS E 16 N NH2 E 17 1555 1555 1.43 LINK C ACE F 0 N TRP F 1 1555 1555 1.34 LINK CH3 ACE F 0 SG CYS F 16 1555 1555 1.78 LINK C LEU F 4 N ALY F 5 1555 1555 1.33 LINK C ALY F 5 N ILE F 6 1555 1555 1.34 LINK C GLY F 7 N ALY F 8 1555 1555 1.33 LINK C ALY F 8 N GLY F 9 1555 1555 1.32 LINK C CYS F 16 N NH2 F 17 1555 1555 1.43 CRYST1 62.100 81.543 69.012 90.00 101.04 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016103 0.000000 0.003142 0.00000 SCALE2 0.000000 0.012263 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014763 0.00000 CONECT 3981 3982 3983 3984 CONECT 3982 3981 CONECT 3983 3981 4125 CONECT 3984 3981 CONECT 4021 4036 CONECT 4027 4028 CONECT 4028 4027 4029 4030 CONECT 4029 4028 CONECT 4030 4028 4031 CONECT 4031 4030 4032 CONECT 4032 4031 4033 CONECT 4033 4032 4034 CONECT 4034 4033 4035 CONECT 4035 4034 4036 4037 CONECT 4036 4021 4035 CONECT 4037 4035 4038 4039 CONECT 4038 4037 CONECT 4039 4037 CONECT 4049 4060 CONECT 4051 4052 CONECT 4052 4051 4053 4054 CONECT 4053 4052 CONECT 4054 4052 4055 CONECT 4055 4054 4056 CONECT 4056 4055 4057 CONECT 4057 4056 4058 CONECT 4058 4057 4059 CONECT 4059 4058 4060 4061 CONECT 4060 4049 4059 CONECT 4061 4059 4062 4063 CONECT 4062 4061 CONECT 4063 4061 CONECT 4122 4126 CONECT 4125 3983 CONECT 4126 4122 CONECT 4128 4129 4130 4131 CONECT 4129 4128 CONECT 4130 4128 4272 CONECT 4131 4128 CONECT 4168 4183 CONECT 4174 4175 CONECT 4175 4174 4176 4177 CONECT 4176 4175 CONECT 4177 4175 4178 CONECT 4178 4177 4179 CONECT 4179 4178 4180 CONECT 4180 4179 4181 CONECT 4181 4180 4182 CONECT 4182 4181 4183 4184 CONECT 4183 4168 4182 CONECT 4184 4182 4185 4186 CONECT 4185 4184 CONECT 4186 4184 CONECT 4196 4207 CONECT 4198 4199 CONECT 4199 4198 4200 4201 CONECT 4200 4199 CONECT 4201 4199 4202 CONECT 4202 4201 4203 CONECT 4203 4202 4204 CONECT 4204 4203 4205 CONECT 4205 4204 4206 CONECT 4206 4205 4207 4208 CONECT 4207 4196 4206 CONECT 4208 4206 4209 4210 CONECT 4209 4208 CONECT 4210 4208 CONECT 4269 4273 CONECT 4272 4130 CONECT 4273 4269 CONECT 4275 4276 4277 CONECT 4276 4275 CONECT 4277 4275 4278 4279 CONECT 4278 4277 CONECT 4279 4277 4280 CONECT 4280 4279 CONECT 4281 4282 4283 CONECT 4282 4281 CONECT 4283 4281 4284 4285 CONECT 4284 4283 CONECT 4285 4283 4286 CONECT 4286 4285 CONECT 4287 4288 4289 CONECT 4288 4287 CONECT 4289 4287 4290 4291 CONECT 4290 4289 CONECT 4291 4289 4292 CONECT 4292 4291 MASTER 813 0 11 31 0 0 0 6 4721 6 88 48 END