HEADER VIRUS 06-JAN-25 9MR1 TITLE SARS-COV-2 S2 MONOMER IN COMPLEX WITH R125-61 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: R125-61 FAB HEAVY CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: R125-61 FAB LIGHT CHAIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: SPIKE PROTEIN S2; COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293F; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: HEK293F; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 19 2; SOURCE 20 ORGANISM_TAXID: 2697049; SOURCE 21 GENE: S, 2; SOURCE 22 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 23 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 25 EXPRESSION_SYSTEM_CELL_LINE: HEK293F KEYWDS SARS-COV-2, SPIKE, S2, COVID, MONOCLONAL ANTIBODY, COMPLEX, VIRAL KEYWDS 2 PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR S.PARK,B.BANGARU,A.B.WARD REVDAT 1 26-NOV-25 9MR1 0 JRNL AUTH S.CHANGROB,A.YASUHARA,S.PARK,S.BANGARU,L.LI,C.A.TROXELL, JRNL AUTH 2 P.J.HALFMANN,S.A.ERICKSON,N.J.CATANZARO,M.YUAN,P.ZHOU, JRNL AUTH 3 M.HUANG,G.D.WILBANKS,J.J.C.MCGRATH,G.SINGH,S.A.NELSON,Y.FU, JRNL AUTH 4 N.Y.ZHENG,S.M.CARAYANNOPOULOS,H.L.DUGAN,D.G.SHAW, JRNL AUTH 5 C.T.STAMPER,M.L.L.MADARIAGA,F.KRAMMER,R.ANDRABI,D.R.BURTON, JRNL AUTH 6 A.B.WARD,I.A.WILSON,Y.KAWAOKA,P.C.WILSON JRNL TITL COMMON COLD EMBECOVIRUS IMPRINTING PRIMES BROADLY JRNL TITL 2 NEUTRALIZING ANTIBODY RESPONSES TO SARS-COV-2 S2. JRNL REF J.EXP.MED. V. 222 2025 JRNL REFN ESSN 1540-9538 JRNL PMID 41066082 JRNL DOI 10.1084/JEM.20251146 REMARK 2 REMARK 2 RESOLUTION. 3.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, EPU, CRYOSPARC, COOT, REMARK 3 PHENIX, ROSETTA, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 6XR8 REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.590 REMARK 3 NUMBER OF PARTICLES : 199418 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9MR1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-25. REMARK 100 THE DEPOSITION ID IS D_1000291277. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : STRUCTURE OF SARS-COV-2 S2 REMARK 245 MONOMER IN COMPLEX WITH R125-61 REMARK 245 FAB REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS GLACIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 700.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 190000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER C 698 REMARK 465 LEU C 699 REMARK 465 GLY C 700 REMARK 465 ALA C 701 REMARK 465 GLU C 702 REMARK 465 ASN C 703 REMARK 465 SER C 704 REMARK 465 VAL C 705 REMARK 465 ALA C 706 REMARK 465 TYR C 707 REMARK 465 SER C 708 REMARK 465 ASN C 709 REMARK 465 ASN C 710 REMARK 465 SER C 711 REMARK 465 ILE C 712 REMARK 465 ALA C 713 REMARK 465 ILE C 714 REMARK 465 PRO C 715 REMARK 465 THR C 716 REMARK 465 ASN C 717 REMARK 465 ASP C 745 REMARK 465 SER C 746 REMARK 465 THR C 747 REMARK 465 GLU C 748 REMARK 465 CYS C 749 REMARK 465 SER C 750 REMARK 465 ASN C 751 REMARK 465 LEU C 752 REMARK 465 VAL C 785 REMARK 465 LYS C 786 REMARK 465 GLN C 787 REMARK 465 ILE C 788 REMARK 465 TYR C 789 REMARK 465 LYS C 790 REMARK 465 THR C 791 REMARK 465 PRO C 792 REMARK 465 PRO C 793 REMARK 465 ILE C 794 REMARK 465 LYS C 795 REMARK 465 ASP C 796 REMARK 465 PHE C 797 REMARK 465 GLY C 798 REMARK 465 GLY C 799 REMARK 465 ASP C 808 REMARK 465 PRO C 809 REMARK 465 SER C 810 REMARK 465 LYS C 811 REMARK 465 PRO C 812 REMARK 465 SER C 813 REMARK 465 LYS C 814 REMARK 465 ARG C 815 REMARK 465 LEU C 828 REMARK 465 ALA C 829 REMARK 465 ASP C 830 REMARK 465 ALA C 831 REMARK 465 GLY C 832 REMARK 465 PHE C 833 REMARK 465 ILE C 834 REMARK 465 LYS C 835 REMARK 465 GLN C 836 REMARK 465 TYR C 837 REMARK 465 GLY C 838 REMARK 465 ASP C 839 REMARK 465 CYS C 840 REMARK 465 LEU C 841 REMARK 465 GLY C 842 REMARK 465 ASP C 843 REMARK 465 ILE C 844 REMARK 465 ALA C 845 REMARK 465 ALA C 846 REMARK 465 ARG C 847 REMARK 465 ASP C 848 REMARK 465 LEU C 849 REMARK 465 ILE C 850 REMARK 465 CYS C 851 REMARK 465 ALA C 852 REMARK 465 GLN C 853 REMARK 465 LYS C 854 REMARK 465 PHE C 855 REMARK 465 ASN C 856 REMARK 465 SER C 884 REMARK 465 GLY C 885 REMARK 465 TRP C 886 REMARK 465 THR C 887 REMARK 465 CYS C 888 REMARK 465 GLY C 889 REMARK 465 ALA C 890 REMARK 465 GLY C 891 REMARK 465 PRO C 892 REMARK 465 ALA C 893 REMARK 465 LEU C 894 REMARK 465 GLN C 895 REMARK 465 ILE C 896 REMARK 465 PRO C 897 REMARK 465 PHE C 898 REMARK 465 ILE C 909 REMARK 465 GLY C 910 REMARK 465 VAL C 911 REMARK 465 PRO C 912 REMARK 465 GLN C 913 REMARK 465 ASN C 914 REMARK 465 VAL C 915 REMARK 465 LEU C 916 REMARK 465 TYR C 917 REMARK 465 GLU C 918 REMARK 465 ASN C 919 REMARK 465 GLN C 920 REMARK 465 LYS C 921 REMARK 465 LEU C 922 REMARK 465 ASP C 936 REMARK 465 SER C 937 REMARK 465 LEU C 938 REMARK 465 SER C 939 REMARK 465 SER C 940 REMARK 465 THR C 941 REMARK 465 PRO C 942 REMARK 465 SER C 943 REMARK 465 ALA C 944 REMARK 465 ALA C 1070 REMARK 465 GLN C 1071 REMARK 465 GLU C 1072 REMARK 465 LYS C 1073 REMARK 465 ASN C 1074 REMARK 465 PHE C 1075 REMARK 465 THR C 1076 REMARK 465 THR C 1077 REMARK 465 ALA C 1078 REMARK 465 PRO C 1079 REMARK 465 ALA C 1080 REMARK 465 ILE C 1081 REMARK 465 CYS C 1082 REMARK 465 HIS C 1083 REMARK 465 ASP C 1084 REMARK 465 GLY C 1085 REMARK 465 LYS C 1086 REMARK 465 ALA C 1087 REMARK 465 HIS C 1088 REMARK 465 PHE C 1089 REMARK 465 PRO C 1090 REMARK 465 ARG C 1091 REMARK 465 GLU C 1092 REMARK 465 GLY C 1093 REMARK 465 VAL C 1094 REMARK 465 PHE C 1095 REMARK 465 VAL C 1096 REMARK 465 SER C 1097 REMARK 465 ASN C 1098 REMARK 465 GLY C 1099 REMARK 465 THR C 1100 REMARK 465 HIS C 1101 REMARK 465 TRP C 1102 REMARK 465 PHE C 1103 REMARK 465 VAL C 1104 REMARK 465 THR C 1105 REMARK 465 GLN C 1106 REMARK 465 ARG C 1107 REMARK 465 ASN C 1108 REMARK 465 PHE C 1109 REMARK 465 TYR C 1110 REMARK 465 GLU C 1111 REMARK 465 PRO C 1112 REMARK 465 GLN C 1113 REMARK 465 ILE C 1114 REMARK 465 ILE C 1115 REMARK 465 THR C 1116 REMARK 465 CYS C 1117 REMARK 465 ASP C 1118 REMARK 465 ASN C 1119 REMARK 465 THR C 1120 REMARK 465 PHE C 1121 REMARK 465 VAL C 1122 REMARK 465 SER C 1123 REMARK 465 GLY C 1124 REMARK 465 ASN C 1125 REMARK 465 CYS C 1126 REMARK 465 ASP C 1127 REMARK 465 VAL C 1128 REMARK 465 VAL C 1129 REMARK 465 ILE C 1130 REMARK 465 GLY C 1131 REMARK 465 ILE C 1132 REMARK 465 VAL C 1133 REMARK 465 ASN C 1134 REMARK 465 ASN C 1135 REMARK 465 THR C 1136 REMARK 465 VAL C 1137 REMARK 465 TYR C 1138 REMARK 465 CYS C 1139 REMARK 465 PRO C 1140 REMARK 465 LEU C 1141 REMARK 465 GLN C 1142 REMARK 465 PRO C 1143 REMARK 465 GLU C 1144 REMARK 465 LEU C 1145 REMARK 465 ASP C 1146 REMARK 465 SER C 1147 REMARK 465 PHE C 1148 REMARK 465 LYS C 1149 REMARK 465 GLU C 1150 REMARK 465 GLU C 1151 REMARK 465 LEU C 1152 REMARK 465 ASP C 1153 REMARK 465 LYS C 1154 REMARK 465 TYR C 1155 REMARK 465 PHE C 1156 REMARK 465 LYS C 1157 REMARK 465 ASN C 1158 REMARK 465 HIS C 1159 REMARK 465 THR C 1160 REMARK 465 SER C 1161 REMARK 465 GLY C 1162 REMARK 465 SER C 1163 REMARK 465 HIS C 1164 REMARK 465 HIS C 1165 REMARK 465 HIS C 1166 REMARK 465 HIS C 1167 REMARK 465 HIS C 1168 REMARK 465 HIS C 1169 REMARK 465 HIS C 1170 REMARK 465 HIS C 1171 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 30 51.21 -91.07 REMARK 500 TYR A 52 149.08 -172.52 REMARK 500 ASN A 99 38.97 71.61 REMARK 500 TYR B 32 58.60 -95.04 REMARK 500 ALA B 51 -6.96 71.57 REMARK 500 ASP C1041 -4.73 72.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-48548 RELATED DB: EMDB REMARK 900 SARS-COV-2 S2 MONOMER IN COMPLEX WITH R125-61 FAB DBREF 9MR1 A 1 113 PDB 9MR1 9MR1 1 113 DBREF 9MR1 B 1 106 PDB 9MR1 9MR1 1 106 DBREF 9MR1 C 698 1161 UNP P0DTC2 SPIKE_SARS2 698 1161 SEQADV 9MR1 PRO C 817 UNP P0DTC2 PHE 817 ENGINEERED MUTATION SEQADV 9MR1 CYS C 880 UNP P0DTC2 GLY 880 ENGINEERED MUTATION SEQADV 9MR1 CYS C 888 UNP P0DTC2 PHE 888 ENGINEERED MUTATION SEQADV 9MR1 PRO C 892 UNP P0DTC2 ALA 892 ENGINEERED MUTATION SEQADV 9MR1 PRO C 899 UNP P0DTC2 ALA 899 ENGINEERED MUTATION SEQADV 9MR1 PRO C 912 UNP P0DTC2 THR 912 ENGINEERED MUTATION SEQADV 9MR1 PRO C 942 UNP P0DTC2 ALA 942 ENGINEERED MUTATION SEQADV 9MR1 PRO C 986 UNP P0DTC2 LYS 986 ENGINEERED MUTATION SEQADV 9MR1 PRO C 987 UNP P0DTC2 VAL 987 ENGINEERED MUTATION SEQADV 9MR1 CYS C 1117 UNP P0DTC2 THR 1117 ENGINEERED MUTATION SEQADV 9MR1 CYS C 1139 UNP P0DTC2 ASP 1139 ENGINEERED MUTATION SEQADV 9MR1 GLY C 1162 UNP P0DTC2 EXPRESSION TAG SEQADV 9MR1 SER C 1163 UNP P0DTC2 EXPRESSION TAG SEQADV 9MR1 HIS C 1164 UNP P0DTC2 EXPRESSION TAG SEQADV 9MR1 HIS C 1165 UNP P0DTC2 EXPRESSION TAG SEQADV 9MR1 HIS C 1166 UNP P0DTC2 EXPRESSION TAG SEQADV 9MR1 HIS C 1167 UNP P0DTC2 EXPRESSION TAG SEQADV 9MR1 HIS C 1168 UNP P0DTC2 EXPRESSION TAG SEQADV 9MR1 HIS C 1169 UNP P0DTC2 EXPRESSION TAG SEQADV 9MR1 HIS C 1170 UNP P0DTC2 EXPRESSION TAG SEQADV 9MR1 HIS C 1171 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 117 GLN VAL GLN LEU GLN GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 A 117 PRO SER GLU THR LEU SER LEU ILE CYS THR VAL SER GLY SEQRES 3 A 117 GLY SER ILE THR ARG ASP PHE TRP SER TRP VAL ARG GLN SEQRES 4 A 117 PRO PRO GLY LYS GLY LEU GLU TRP ILE GLY TYR GLY TYR SEQRES 5 A 117 TYR ARG GLY SER THR ASN TYR ASN PRO SER LEU GLU SER SEQRES 6 A 117 ARG VAL THR ILE SER VAL ASP THR SER LYS ASN GLN PHE SEQRES 7 A 117 SER LEU LYS LEU THR SER VAL THR ALA ALA ASP THR ALA SEQRES 8 A 117 VAL TYR TYR CYS ALA ARG GLU THR ALA HIS ASN TRP ILE SEQRES 9 A 117 ASP THR TRP GLY GLN GLY ILE LEU VAL THR VAL SER SER SEQRES 1 B 112 ASP ILE VAL MET THR GLN SER PRO GLU SER LEU ALA LEU SEQRES 2 B 112 SER LEU GLY GLU ARG ALA THR ILE ASN CYS LYS SER SER SEQRES 3 B 112 GLN THR VAL SER PHE THR SER ASN ASN LYS ASN TYR LEU SEQRES 4 B 112 ALA TRP TYR GLN GLN LYS PRO ARG GLN PRO PRO LYS LEU SEQRES 5 B 112 LEU PHE TYR TRP ALA SER THR ARG HIS SER GLY VAL PRO SEQRES 6 B 112 ASP ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR SEQRES 7 B 112 LEU THR ILE ASN SER LEU GLN ALA GLU ASP VAL ALA VAL SEQRES 8 B 112 TYR PHE CYS HIS GLN TYR PHE SER THR PRO TRP THR PHE SEQRES 9 B 112 GLY GLN GLY THR LYS VAL GLU ILE SEQRES 1 C 474 SER LEU GLY ALA GLU ASN SER VAL ALA TYR SER ASN ASN SEQRES 2 C 474 SER ILE ALA ILE PRO THR ASN PHE THR ILE SER VAL THR SEQRES 3 C 474 THR GLU ILE LEU PRO VAL SER MET THR LYS THR SER VAL SEQRES 4 C 474 ASP CYS THR MET TYR ILE CYS GLY ASP SER THR GLU CYS SEQRES 5 C 474 SER ASN LEU LEU LEU GLN TYR GLY SER PHE CYS THR GLN SEQRES 6 C 474 LEU ASN ARG ALA LEU THR GLY ILE ALA VAL GLU GLN ASP SEQRES 7 C 474 LYS ASN THR GLN GLU VAL PHE ALA GLN VAL LYS GLN ILE SEQRES 8 C 474 TYR LYS THR PRO PRO ILE LYS ASP PHE GLY GLY PHE ASN SEQRES 9 C 474 PHE SER GLN ILE LEU PRO ASP PRO SER LYS PRO SER LYS SEQRES 10 C 474 ARG SER PRO ILE GLU ASP LEU LEU PHE ASN LYS VAL THR SEQRES 11 C 474 LEU ALA ASP ALA GLY PHE ILE LYS GLN TYR GLY ASP CYS SEQRES 12 C 474 LEU GLY ASP ILE ALA ALA ARG ASP LEU ILE CYS ALA GLN SEQRES 13 C 474 LYS PHE ASN GLY LEU THR VAL LEU PRO PRO LEU LEU THR SEQRES 14 C 474 ASP GLU MET ILE ALA GLN TYR THR SER ALA LEU LEU ALA SEQRES 15 C 474 CYS THR ILE THR SER GLY TRP THR CYS GLY ALA GLY PRO SEQRES 16 C 474 ALA LEU GLN ILE PRO PHE PRO MET GLN MET ALA TYR ARG SEQRES 17 C 474 PHE ASN GLY ILE GLY VAL PRO GLN ASN VAL LEU TYR GLU SEQRES 18 C 474 ASN GLN LYS LEU ILE ALA ASN GLN PHE ASN SER ALA ILE SEQRES 19 C 474 GLY LYS ILE GLN ASP SER LEU SER SER THR PRO SER ALA SEQRES 20 C 474 LEU GLY LYS LEU GLN ASP VAL VAL ASN GLN ASN ALA GLN SEQRES 21 C 474 ALA LEU ASN THR LEU VAL LYS GLN LEU SER SER ASN PHE SEQRES 22 C 474 GLY ALA ILE SER SER VAL LEU ASN ASP ILE LEU SER ARG SEQRES 23 C 474 LEU ASP PRO PRO GLU ALA GLU VAL GLN ILE ASP ARG LEU SEQRES 24 C 474 ILE THR GLY ARG LEU GLN SER LEU GLN THR TYR VAL THR SEQRES 25 C 474 GLN GLN LEU ILE ARG ALA ALA GLU ILE ARG ALA SER ALA SEQRES 26 C 474 ASN LEU ALA ALA THR LYS MET SER GLU CYS VAL LEU GLY SEQRES 27 C 474 GLN SER LYS ARG VAL ASP PHE CYS GLY LYS GLY TYR HIS SEQRES 28 C 474 LEU MET SER PHE PRO GLN SER ALA PRO HIS GLY VAL VAL SEQRES 29 C 474 PHE LEU HIS VAL THR TYR VAL PRO ALA GLN GLU LYS ASN SEQRES 30 C 474 PHE THR THR ALA PRO ALA ILE CYS HIS ASP GLY LYS ALA SEQRES 31 C 474 HIS PHE PRO ARG GLU GLY VAL PHE VAL SER ASN GLY THR SEQRES 32 C 474 HIS TRP PHE VAL THR GLN ARG ASN PHE TYR GLU PRO GLN SEQRES 33 C 474 ILE ILE THR CYS ASP ASN THR PHE VAL SER GLY ASN CYS SEQRES 34 C 474 ASP VAL VAL ILE GLY ILE VAL ASN ASN THR VAL TYR CYS SEQRES 35 C 474 PRO LEU GLN PRO GLU LEU ASP SER PHE LYS GLU GLU LEU SEQRES 36 C 474 ASP LYS TYR PHE LYS ASN HIS THR SER GLY SER HIS HIS SEQRES 37 C 474 HIS HIS HIS HIS HIS HIS HET NAG C1201 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG C8 H15 N O6 HELIX 1 AA1 PRO A 61 GLU A 64 5 4 HELIX 2 AA2 THR A 83 THR A 87 5 5 HELIX 3 AA3 GLN B 79 VAL B 83 5 5 HELIX 4 AA4 ASP C 737 ILE C 742 1 6 HELIX 5 AA5 SER C 758 PHE C 782 1 25 HELIX 6 AA6 PRO C 817 VAL C 826 1 10 HELIX 7 AA7 THR C 866 THR C 883 1 18 HELIX 8 AA8 MET C 900 PHE C 906 1 7 HELIX 9 AA9 ALA C 924 GLN C 935 1 12 HELIX 10 AB1 GLY C 946 SER C 968 1 23 HELIX 11 AB2 VAL C 976 LEU C 984 1 9 HELIX 12 AB3 ASP C 985 CYS C 1032 1 48 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O THR A 23 N GLN A 5 SHEET 3 AA1 4 GLN A 77 LEU A 82 -1 O PHE A 78 N CYS A 22 SHEET 4 AA1 4 VAL A 67 ASP A 72 -1 N THR A 68 O LYS A 81 SHEET 1 AA2 5 ASN A 58 TYR A 59 0 SHEET 2 AA2 5 GLY A 49 GLY A 51 -1 N TYR A 50 O ASN A 58 SHEET 3 AA2 5 PHE A 33 GLN A 39 -1 N TRP A 34 O GLY A 51 SHEET 4 AA2 5 ALA A 88 GLU A 95 -1 O TYR A 91 N VAL A 37 SHEET 5 AA2 5 ILE A 107 VAL A 109 -1 O VAL A 109 N ALA A 88 SHEET 1 AA3 4 MET B 4 GLN B 6 0 SHEET 2 AA3 4 ALA B 19 SER B 25 -1 O LYS B 24 N THR B 5 SHEET 3 AA3 4 ASP B 70 ILE B 75 -1 O ILE B 75 N ALA B 19 SHEET 4 AA3 4 PHE B 62 SER B 67 -1 N SER B 63 O THR B 74 SHEET 1 AA4 6 LEU B 11 ALA B 12 0 SHEET 2 AA4 6 THR B 102 GLU B 105 1 O GLU B 105 N LEU B 11 SHEET 3 AA4 6 ALA B 84 GLN B 90 -1 N ALA B 84 O VAL B 104 SHEET 4 AA4 6 LEU B 33 GLN B 38 -1 N GLN B 38 O VAL B 85 SHEET 5 AA4 6 LYS B 45 TYR B 49 -1 O LYS B 45 N GLN B 37 SHEET 6 AA4 6 THR B 53 ARG B 54 -1 O THR B 53 N TYR B 49 SHEET 1 AA5 3 THR C 719 LEU C 727 0 SHEET 2 AA5 3 GLY C1059 VAL C1068 -1 O VAL C1068 N THR C 719 SHEET 3 AA5 3 TYR C1047 ALA C1056 -1 N MET C1050 O VAL C1065 SSBOND 1 CYS A 22 CYS A 92 1555 1555 2.03 SSBOND 2 CYS B 23 CYS B 88 1555 1555 2.03 SSBOND 3 CYS C 738 CYS C 760 1555 1555 2.03 SSBOND 4 CYS C 1032 CYS C 1043 1555 1555 2.03 LINK ND2 ASN C 801 C1 NAG C1201 1555 1555 1.44 CISPEP 1 THR B 94 PRO B 95 0 1.12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 910 SER A 113 TER 1798 ILE B 106 TER 3751 PRO C1069 HETATM 3752 C1 NAG C1201 178.436 163.512 206.771 1.00 67.10 C HETATM 3753 C2 NAG C1201 179.768 164.273 206.748 1.00 67.10 C HETATM 3754 C3 NAG C1201 180.662 163.704 205.649 1.00 67.10 C HETATM 3755 C4 NAG C1201 180.807 162.195 205.814 1.00 67.10 C HETATM 3756 C5 NAG C1201 179.417 161.555 205.909 1.00 67.10 C HETATM 3757 C6 NAG C1201 179.447 160.056 206.109 1.00 67.10 C HETATM 3758 C7 NAG C1201 179.800 166.622 207.489 1.00 67.10 C HETATM 3759 C8 NAG C1201 179.498 168.039 207.067 1.00 67.10 C HETATM 3760 N2 NAG C1201 179.552 165.683 206.557 1.00 67.10 N HETATM 3761 O3 NAG C1201 181.900 164.361 205.712 1.00 67.10 O HETATM 3762 O4 NAG C1201 181.524 161.720 204.698 1.00 67.10 O HETATM 3763 O5 NAG C1201 178.703 162.144 206.978 1.00 67.10 O HETATM 3764 O6 NAG C1201 178.132 159.570 206.235 1.00 67.10 O HETATM 3765 O7 NAG C1201 180.238 166.367 208.602 1.00 67.10 O CONECT 161 736 CONECT 736 161 CONECT 1078 1646 CONECT 1646 1078 CONECT 1954 2063 CONECT 2063 1954 CONECT 2269 3752 CONECT 3461 3547 CONECT 3547 3461 CONECT 3752 2269 3753 3763 CONECT 3753 3752 3754 3760 CONECT 3754 3753 3755 3761 CONECT 3755 3754 3756 3762 CONECT 3756 3755 3757 3763 CONECT 3757 3756 3764 CONECT 3758 3759 3760 3765 CONECT 3759 3758 CONECT 3760 3753 3758 CONECT 3761 3754 CONECT 3762 3755 CONECT 3763 3752 3756 CONECT 3764 3757 CONECT 3765 3758 MASTER 353 0 1 12 22 0 0 6 3762 3 23 55 END