HEADER IMMUNE SYSTEM 13-JAN-25 9MU1 TITLE ANTI-EGFR FAB SEED FOR DESIGN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB DESIGN SEED HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB DESIGN SEED LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 9 ORGANISM_COMMON: RAT; SOURCE 10 ORGANISM_TAXID: 10116; SOURCE 11 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS ANTIBODY, FAB, EGFR, DESIGN, MACHINE LEARNING, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.R.KIEFER,F.SEEGER,A.M.WATKINS,N.C.FREY,J.L.HOFMANN REVDAT 1 09-SEP-26 9MU1 0 JRNL AUTH J.Y.LIN,J.L.HOFMANN,A.LEAVER-FAY,W.C.LIANG,S.VASILAKI,E.LEE, JRNL AUTH 2 P.O PINHEIRO,N.TAGASOVSKA,J.R KIEFER,Y.WU,F.SEEGER, JRNL AUTH 3 R.BONNEAU,V.GLIGORIJEVIC,A.WATKINS,K.CHO,N.FREY JRNL TITL DYAB: SEQUENCE-BASED ANTIBODY DESIGN AND PROPERTY PREDICTION JRNL TITL 2 IN A LOW-DATA REGIME. JRNL REF MABS V. 18 17460 2026 JRNL REFN ESSN 1942-0870 JRNL PMID 42665538 JRNL DOI 10.1080/19420862.2026.2717460 REMARK 2 REMARK 2 RESOLUTION. 2.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.21.2_5419: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.43 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.920 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 19240 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.180 REMARK 3 FREE R VALUE TEST SET COUNT : 1909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.5900 - 5.8700 0.98 2463 156 0.1879 0.2128 REMARK 3 2 5.8600 - 4.6600 0.98 2460 142 0.1463 0.1989 REMARK 3 3 4.6600 - 4.0700 0.99 2526 119 0.1356 0.1845 REMARK 3 4 4.0700 - 3.7000 0.99 2512 151 0.1613 0.2252 REMARK 3 5 3.7000 - 3.4300 0.99 2501 157 0.1780 0.2486 REMARK 3 6 3.4300 - 3.2300 0.99 2489 153 0.2085 0.2641 REMARK 3 7 3.2300 - 3.0700 0.99 2505 128 0.2216 0.3455 REMARK 3 8 3.0700 - 2.9300 0.98 2471 116 0.2624 0.2770 REMARK 3 9 2.9300 - 2.8200 0.99 2539 129 0.2474 0.2468 REMARK 3 10 2.8200 - 2.7200 0.98 2547 107 0.2563 0.2824 REMARK 3 11 2.7200 - 2.6400 0.99 2472 143 0.2530 0.3161 REMARK 3 12 2.6400 - 2.5600 0.99 2476 138 0.2714 0.3038 REMARK 3 13 2.5600 - 2.5000 0.99 2555 136 0.2695 0.3543 REMARK 3 14 2.5000 - 2.4300 0.98 2444 134 0.2814 0.3332 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3410 REMARK 3 ANGLE : 0.606 4643 REMARK 3 CHIRALITY : 0.044 526 REMARK 3 PLANARITY : 0.008 594 REMARK 3 DIHEDRAL : 15.640 1201 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1430 -16.1055 26.6280 REMARK 3 T TENSOR REMARK 3 T11: 0.2816 T22: 0.3596 REMARK 3 T33: 0.3486 T12: -0.0233 REMARK 3 T13: -0.0133 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 2.3229 L22: 0.9019 REMARK 3 L33: 3.4289 L12: -0.6864 REMARK 3 L13: 0.0176 L23: 0.5265 REMARK 3 S TENSOR REMARK 3 S11: 0.0418 S12: -0.3560 S13: -0.0876 REMARK 3 S21: 0.0088 S22: 0.0481 S23: -0.1427 REMARK 3 S31: -0.1994 S32: 0.1303 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 96 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9537 -6.6618 2.0430 REMARK 3 T TENSOR REMARK 3 T11: 0.2761 T22: 0.2355 REMARK 3 T33: 0.3284 T12: -0.0059 REMARK 3 T13: 0.0191 T23: -0.0132 REMARK 3 L TENSOR REMARK 3 L11: 1.1121 L22: 0.9538 REMARK 3 L33: 1.1423 L12: -0.0855 REMARK 3 L13: -0.1839 L23: -0.6891 REMARK 3 S TENSOR REMARK 3 S11: 0.0025 S12: -0.0227 S13: -0.0429 REMARK 3 S21: -0.1344 S22: -0.0803 S23: -0.1644 REMARK 3 S31: 0.0650 S32: 0.1758 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 2 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.9302 -20.4577 25.4770 REMARK 3 T TENSOR REMARK 3 T11: 0.3877 T22: 0.4632 REMARK 3 T33: 0.5580 T12: 0.0119 REMARK 3 T13: -0.0208 T23: 0.1408 REMARK 3 L TENSOR REMARK 3 L11: 0.1608 L22: 0.2234 REMARK 3 L33: 0.3046 L12: 0.0906 REMARK 3 L13: -0.1372 L23: 0.1029 REMARK 3 S TENSOR REMARK 3 S11: 0.1068 S12: -0.6341 S13: -0.4380 REMARK 3 S21: -0.1359 S22: 0.3725 S23: -0.0810 REMARK 3 S31: 0.1995 S32: -0.4343 S33: 0.0002 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 15 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.9733 -15.3395 30.9873 REMARK 3 T TENSOR REMARK 3 T11: 0.3081 T22: 0.6545 REMARK 3 T33: 0.2947 T12: -0.0156 REMARK 3 T13: -0.0343 T23: 0.1371 REMARK 3 L TENSOR REMARK 3 L11: 0.3824 L22: 0.2981 REMARK 3 L33: 0.6333 L12: -0.0678 REMARK 3 L13: -0.2851 L23: 0.3652 REMARK 3 S TENSOR REMARK 3 S11: 0.0765 S12: -0.6011 S13: -0.1299 REMARK 3 S21: 0.0203 S22: 0.1737 S23: 0.0249 REMARK 3 S31: 0.1119 S32: -0.5811 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 39 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.7366 -8.6042 30.2325 REMARK 3 T TENSOR REMARK 3 T11: 0.3724 T22: 0.5141 REMARK 3 T33: 0.3193 T12: 0.0585 REMARK 3 T13: 0.0196 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 1.0455 L22: 0.6912 REMARK 3 L33: 0.4682 L12: -0.3439 REMARK 3 L13: 0.4800 L23: 0.1968 REMARK 3 S TENSOR REMARK 3 S11: -0.1840 S12: -0.4519 S13: -0.0084 REMARK 3 S21: -0.1210 S22: 0.1185 S23: -0.0475 REMARK 3 S31: -0.0437 S32: -0.2550 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 76 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.3522 -14.4437 27.9459 REMARK 3 T TENSOR REMARK 3 T11: 0.3645 T22: 0.4845 REMARK 3 T33: 0.2915 T12: 0.0332 REMARK 3 T13: 0.0376 T23: 0.0900 REMARK 3 L TENSOR REMARK 3 L11: 0.5468 L22: 0.6776 REMARK 3 L33: 0.9127 L12: 0.4240 REMARK 3 L13: 0.0845 L23: 0.6224 REMARK 3 S TENSOR REMARK 3 S11: -0.1291 S12: -0.5418 S13: 0.0100 REMARK 3 S21: 0.1432 S22: -0.0732 S23: -0.0510 REMARK 3 S31: -0.1723 S32: -0.1084 S33: -0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 102 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.5729 -9.7078 9.9495 REMARK 3 T TENSOR REMARK 3 T11: 0.2383 T22: 0.3070 REMARK 3 T33: 0.3382 T12: 0.0214 REMARK 3 T13: -0.0138 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 0.6073 L22: 0.3596 REMARK 3 L33: 1.1409 L12: -0.4169 REMARK 3 L13: 0.8250 L23: -0.5992 REMARK 3 S TENSOR REMARK 3 S11: 0.0634 S12: -0.4430 S13: -0.3360 REMARK 3 S21: 0.1276 S22: 0.3987 S23: 0.1904 REMARK 3 S31: 0.1753 S32: -0.6193 S33: 0.0526 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 114 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.2470 -8.3884 -14.2122 REMARK 3 T TENSOR REMARK 3 T11: 0.4525 T22: 0.3306 REMARK 3 T33: 0.4050 T12: -0.0025 REMARK 3 T13: 0.1349 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.0508 L22: 0.3406 REMARK 3 L33: 0.1853 L12: 0.1105 REMARK 3 L13: 0.0621 L23: 0.1009 REMARK 3 S TENSOR REMARK 3 S11: 0.7171 S12: -0.0485 S13: 1.1747 REMARK 3 S21: -0.5220 S22: -0.1259 S23: -0.3408 REMARK 3 S31: -0.5004 S32: 0.0988 S33: 0.0002 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 129 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.3168 -13.6726 -3.9185 REMARK 3 T TENSOR REMARK 3 T11: 0.2856 T22: 0.2452 REMARK 3 T33: 0.2750 T12: -0.0016 REMARK 3 T13: -0.0281 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 1.1768 L22: 1.4447 REMARK 3 L33: 1.1806 L12: -0.0454 REMARK 3 L13: -0.9415 L23: -0.7217 REMARK 3 S TENSOR REMARK 3 S11: 0.0217 S12: 0.0596 S13: -0.1357 REMARK 3 S21: -0.1676 S22: 0.0877 S23: -0.1436 REMARK 3 S31: 0.1442 S32: 0.0332 S33: 0.0001 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 175 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.8332 -13.5456 -15.4767 REMARK 3 T TENSOR REMARK 3 T11: 0.4158 T22: 0.2859 REMARK 3 T33: 0.2796 T12: 0.0022 REMARK 3 T13: 0.0202 T23: -0.0427 REMARK 3 L TENSOR REMARK 3 L11: 0.5997 L22: 0.9466 REMARK 3 L33: 0.8107 L12: 0.0947 REMARK 3 L13: 0.5724 L23: -0.0230 REMARK 3 S TENSOR REMARK 3 S11: 0.0192 S12: 0.3927 S13: -0.2543 REMARK 3 S21: -0.4484 S22: -0.0642 S23: -0.0764 REMARK 3 S31: 0.0593 S32: -0.0244 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9MU1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JAN-25. REMARK 100 THE DEPOSITION ID IS D_1000291851. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-24 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19244 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.430 REMARK 200 RESOLUTION RANGE LOW (A) : 47.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.19500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.43 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.77900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1M SODIUM REMARK 280 ACETATE PH 4.6, 30% W/V PEG 2000 MME, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 47.49000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.33000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 47.49000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.33000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 205 CG CD CE NZ REMARK 470 LYS H 214 CG CD CE NZ REMARK 470 LYS H 218 CG CD CE NZ REMARK 470 GLU L 94 CG CD OE1 OE2 REMARK 470 LYS L 103 CG CD CE NZ REMARK 470 LYS L 190 CG CD CE NZ REMARK 470 GLU L 213 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP H 9 154.47 -49.84 REMARK 500 TYR H 96 -76.01 -69.38 REMARK 500 ASP H 148 71.22 65.11 REMARK 500 ALA L 10 158.86 -47.14 REMARK 500 SER L 30 -133.07 59.21 REMARK 500 ALA L 51 -40.64 76.61 REMARK 500 SER L 52 40.48 -155.46 REMARK 500 SER L 67 144.90 -173.25 REMARK 500 ALA L 84 -173.56 175.85 REMARK 500 ASN L 138 73.34 56.97 REMARK 500 ASN L 158 32.54 -147.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG L 142 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9MSW RELATED DB: PDB DBREF 9MU1 H 1 221 PDB 9MU1 9MU1 1 221 DBREF 9MU1 L 2 214 PDB 9MU1 9MU1 2 214 SEQRES 1 H 225 GLU VAL LYS LEU GLN GLN SER GLY ASP GLU THR MET ARG SEQRES 2 H 225 PRO GLY ALA SER VAL ARG MET SER CYS LYS ALA TYR GLY SEQRES 3 H 225 TYR THR PHE THR ASP TYR SER VAL HIS TRP ILE ARG GLN SEQRES 4 H 225 ARG PRO GLY GLN GLY LEU GLU TRP ILE GLY ILE ILE ILE SEQRES 5 H 225 PRO LEU ILE ASP THR THR ARG TYR ASN GLN LYS PHE LYS SEQRES 6 H 225 GLY LYS ALA VAL LEU THR ALA ASP THR SER SER ASP THR SEQRES 7 H 225 ALA TYR MET GLU LEU SER ARG LEU THR PHE GLU ASP SER SEQRES 8 H 225 ALA VAL TYR TYR CYS ALA ARG SER TYR GLY SER SER GLY SEQRES 9 H 225 ASP ASP TRP PHE ALA TYR TRP GLY GLN GLY THR LEU VAL SEQRES 10 H 225 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 H 225 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 12 H 225 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 H 225 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 H 225 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 H 225 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 H 225 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 17 H 225 LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO SEQRES 18 H 225 LYS SER CYS ASP SEQRES 1 L 213 ASP THR VAL LEU THR GLN SER PRO ALA LEU SER VAL SER SEQRES 2 L 213 PRO GLY GLU ARG VAL ASP ILE SER CYS ARG ALA SER GLU SEQRES 3 L 213 SER VAL SER THR LEU LEU HIS TRP TYR GLN GLN LYS PRO SEQRES 4 L 213 GLY GLN GLN PRO THR LEU LEU ILE SER LEU ALA SER SER SEQRES 5 L 213 LEU GLU SER GLY VAL PRO ALA ARG PHE SER GLY SER GLY SEQRES 6 L 213 SER GLY THR ASP PHE THR LEU THR ILE ASP PRO VAL GLU SEQRES 7 L 213 ALA ASP ASP THR ALA ILE TYR TYR CYS GLN GLU SER TRP SEQRES 8 L 213 ASN GLU PRO TYR ALA PHE GLY ALA GLY THR LYS LEU GLU SEQRES 9 L 213 LEU LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE SEQRES 10 L 213 PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER SEQRES 11 L 213 VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA SEQRES 12 L 213 LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY SEQRES 13 L 213 ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SEQRES 14 L 213 SER THR TYR SER LEU SER SER THR LEU THR LEU SER LYS SEQRES 15 L 213 ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL SEQRES 16 L 213 THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE SEQRES 17 L 213 ASN ARG GLY GLU CYS HET SO4 H 301 5 HET SO4 H 302 5 HET EDO H 303 10 HET EDO H 304 10 HET EDO H 305 10 HET EDO L 301 10 HET EDO L 302 10 HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 EDO 5(C2 H6 O2) FORMUL 10 HOH *145(H2 O) HELIX 1 AA1 THR H 28 TYR H 32 5 5 HELIX 2 AA2 GLN H 58 LYS H 61 5 4 HELIX 3 AA3 THR H 83 SER H 87 5 5 HELIX 4 AA4 SER H 191 LEU H 193 5 3 HELIX 5 AA5 LYS H 205 ASN H 208 5 4 HELIX 6 AA6 GLU L 79 THR L 83 5 5 HELIX 7 AA7 SER L 121 SER L 127 1 7 HELIX 8 AA8 LYS L 183 GLU L 187 1 5 SHEET 1 AA1 4 LYS H 3 GLN H 6 0 SHEET 2 AA1 4 VAL H 18 TYR H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 AA1 4 THR H 74 LEU H 79 -1 O ALA H 75 N CYS H 22 SHEET 4 AA1 4 ALA H 64 ASP H 69 -1 N THR H 67 O TYR H 76 SHEET 1 AA2 6 GLU H 10 MET H 12 0 SHEET 2 AA2 6 THR H 111 VAL H 115 1 O LEU H 112 N GLU H 10 SHEET 3 AA2 6 ALA H 88 SER H 95 -1 N ALA H 88 O VAL H 113 SHEET 4 AA2 6 VAL H 34 GLN H 39 -1 N ILE H 37 O TYR H 91 SHEET 5 AA2 6 LEU H 45 ILE H 52 -1 O ILE H 48 N TRP H 36 SHEET 6 AA2 6 THR H 53 TYR H 56 -1 O ARG H 55 N ILE H 50 SHEET 1 AA3 4 GLU H 10 MET H 12 0 SHEET 2 AA3 4 THR H 111 VAL H 115 1 O LEU H 112 N GLU H 10 SHEET 3 AA3 4 ALA H 88 SER H 95 -1 N ALA H 88 O VAL H 113 SHEET 4 AA3 4 PHE H 104 TRP H 107 -1 O TYR H 106 N ARG H 94 SHEET 1 AA4 4 SER H 124 LEU H 128 0 SHEET 2 AA4 4 THR H 139 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AA4 4 TYR H 180 PRO H 189 -1 O LEU H 182 N VAL H 146 SHEET 4 AA4 4 VAL H 167 THR H 169 -1 N HIS H 168 O VAL H 185 SHEET 1 AA5 4 THR H 135 SER H 136 0 SHEET 2 AA5 4 THR H 139 TYR H 149 -1 O THR H 139 N SER H 136 SHEET 3 AA5 4 TYR H 180 PRO H 189 -1 O LEU H 182 N VAL H 146 SHEET 4 AA5 4 VAL H 173 LEU H 174 -1 N VAL H 173 O SER H 181 SHEET 1 AA6 3 THR H 155 TRP H 158 0 SHEET 2 AA6 3 ILE H 199 HIS H 204 -1 O ASN H 201 N SER H 157 SHEET 3 AA6 3 THR H 209 LYS H 214 -1 O THR H 209 N HIS H 204 SHEET 1 AA7 4 LEU L 5 GLN L 7 0 SHEET 2 AA7 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 6 SHEET 3 AA7 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AA7 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA8 6 LEU L 11 VAL L 13 0 SHEET 2 AA8 6 THR L 102 LEU L 106 1 O GLU L 105 N LEU L 11 SHEET 3 AA8 6 ALA L 84 GLU L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AA8 6 LEU L 33 GLN L 38 -1 N HIS L 34 O GLN L 89 SHEET 5 AA8 6 THR L 45 SER L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AA8 6 SER L 53 LEU L 54 -1 O SER L 53 N SER L 49 SHEET 1 AA9 4 SER L 114 PHE L 118 0 SHEET 2 AA9 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AA9 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 AA9 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB1 4 ALA L 153 LEU L 154 0 SHEET 2 AB1 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB1 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 AB1 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.05 SSBOND 2 CYS H 144 CYS H 200 1555 1555 2.03 SSBOND 3 CYS H 220 CYS L 214 1555 1555 2.04 SSBOND 4 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 5 CYS L 134 CYS L 194 1555 1555 2.03 CISPEP 1 PHE H 150 PRO H 151 0 -3.39 CISPEP 2 GLU H 152 PRO H 153 0 -1.98 CISPEP 3 ASP L 76 PRO L 77 0 -1.83 CISPEP 4 GLU L 94 PRO L 95 0 -3.39 CISPEP 5 TYR L 140 PRO L 141 0 4.65 CRYST1 94.980 60.660 94.390 90.00 108.44 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010529 0.000000 0.003510 0.00000 SCALE2 0.000000 0.016485 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011168 0.00000 CONECT 324 1514 CONECT 1514 324 CONECT 2217 3038 CONECT 3038 2217 CONECT 3312 6468 CONECT 3636 4594 CONECT 4594 3636 CONECT 5260 6182 CONECT 6182 5260 CONECT 6468 3312 CONECT 6475 6476 6477 6478 6479 CONECT 6476 6475 CONECT 6477 6475 CONECT 6478 6475 CONECT 6479 6475 CONECT 6480 6481 6482 6483 6484 CONECT 6481 6480 CONECT 6482 6480 CONECT 6483 6480 CONECT 6484 6480 CONECT 6485 6486 6487 6489 6490 CONECT 6486 6485 6491 CONECT 6487 6485 6488 6492 6493 CONECT 6488 6487 6494 CONECT 6489 6485 CONECT 6490 6485 CONECT 6491 6486 CONECT 6492 6487 CONECT 6493 6487 CONECT 6494 6488 CONECT 6495 6496 6497 6499 6500 CONECT 6496 6495 6501 CONECT 6497 6495 6498 6502 6503 CONECT 6498 6497 6504 CONECT 6499 6495 CONECT 6500 6495 CONECT 6501 6496 CONECT 6502 6497 CONECT 6503 6497 CONECT 6504 6498 CONECT 6505 6506 6507 6509 6510 CONECT 6506 6505 6511 CONECT 6507 6505 6508 6512 6513 CONECT 6508 6507 6514 CONECT 6509 6505 CONECT 6510 6505 CONECT 6511 6506 CONECT 6512 6507 CONECT 6513 6507 CONECT 6514 6508 CONECT 6515 6516 6517 6519 6520 CONECT 6516 6515 6521 CONECT 6517 6515 6518 6522 6523 CONECT 6518 6517 6524 CONECT 6519 6515 CONECT 6520 6515 CONECT 6521 6516 CONECT 6522 6517 CONECT 6523 6517 CONECT 6524 6518 CONECT 6525 6526 6527 6529 6530 CONECT 6526 6525 6531 CONECT 6527 6525 6528 6532 6533 CONECT 6528 6527 6534 CONECT 6529 6525 CONECT 6530 6525 CONECT 6531 6526 CONECT 6532 6527 CONECT 6533 6527 CONECT 6534 6528 MASTER 416 0 7 8 43 0 0 6 3484 2 70 35 END