HEADER IMMUNE SYSTEM 22-JAN-25 9MZC TITLE ANTI-IL6 DESIGNED FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-IL6 DESIGNED FAB HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTI-IL6 DESIGNED FAB LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 9 ORGANISM_COMMON: RAT; SOURCE 10 ORGANISM_TAXID: 10116; SOURCE 11 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS DESIGN, IMMUNE SYSTEM, PHARMACOLOGY, ANTIBODY, MACHINE LEARNING EXPDTA X-RAY DIFFRACTION AUTHOR J.R.KIEFER,R.G.ALBERSTEIN,N.C.FREY,F.SEEGER,Y.DOU,C.HUO,A.M.WATKINS, AUTHOR 2 A.LEAVER-FAY,J.L.HOFMANN,V.GLIGORIJEVIC,R.BONNEAU REVDAT 1 09-SEP-26 9MZC 0 JRNL AUTH J.R.KIEFER,R.G.ALBERSTEIN,N.C.FREY,F.SEEGER,Y.DOU,C.HUO, JRNL AUTH 2 A.M.WATKINS,A.LEAVER-FAY,J.L.HOFMANN,V.GLIGORIJEVIC, JRNL AUTH 3 R.BONNEAU JRNL TITL LAB-IN-THE-LOOP THERAPEUTIC ANTIBODY DESIGN WITH DEEP JRNL TITL 2 LEARNING JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.21.2_5419: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 62385 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3054 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.2600 - 4.4100 0.99 2981 131 0.1529 0.1448 REMARK 3 2 4.4100 - 3.5000 0.99 2834 140 0.1440 0.1618 REMARK 3 3 3.5000 - 3.0600 0.99 2776 151 0.1550 0.1836 REMARK 3 4 3.0600 - 2.7800 0.99 2727 150 0.1708 0.1859 REMARK 3 5 2.7800 - 2.5800 0.99 2752 150 0.1729 0.2373 REMARK 3 6 2.5800 - 2.4300 0.99 2708 156 0.1800 0.2055 REMARK 3 7 2.4300 - 2.3100 0.98 2735 136 0.1707 0.2308 REMARK 3 8 2.3100 - 2.2100 0.98 2707 133 0.1663 0.2065 REMARK 3 9 2.2100 - 2.1200 0.98 2748 117 0.1653 0.1788 REMARK 3 10 2.1200 - 2.0500 0.98 2659 135 0.1603 0.1926 REMARK 3 11 2.0500 - 1.9800 0.98 2723 145 0.1607 0.1937 REMARK 3 12 1.9800 - 1.9300 0.98 2635 157 0.1839 0.2075 REMARK 3 13 1.9300 - 1.8800 0.98 2679 146 0.1988 0.2465 REMARK 3 14 1.8800 - 1.8300 0.98 2674 139 0.1907 0.2121 REMARK 3 15 1.8300 - 1.7900 0.98 2650 128 0.1850 0.1923 REMARK 3 16 1.7900 - 1.7500 0.97 2665 143 0.1831 0.2459 REMARK 3 17 1.7500 - 1.7200 0.97 2670 131 0.1930 0.2216 REMARK 3 18 1.7200 - 1.6800 0.97 2630 118 0.2181 0.2529 REMARK 3 19 1.6800 - 1.6500 0.97 2644 142 0.2346 0.2402 REMARK 3 20 1.6500 - 1.6300 0.96 2586 161 0.2443 0.2807 REMARK 3 21 1.6300 - 1.6000 0.95 2597 116 0.2541 0.2676 REMARK 3 22 1.6000 - 1.5800 0.95 2551 129 0.2649 0.2715 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3761 REMARK 3 ANGLE : 0.913 5150 REMARK 3 CHIRALITY : 0.056 562 REMARK 3 PLANARITY : 0.007 679 REMARK 3 DIHEDRAL : 12.685 1355 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8447 -1.2229 32.9212 REMARK 3 T TENSOR REMARK 3 T11: 0.0340 T22: -0.0005 REMARK 3 T33: 0.0500 T12: -0.0089 REMARK 3 T13: 0.0054 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 0.6589 L22: 0.8043 REMARK 3 L33: 0.6632 L12: 0.4600 REMARK 3 L13: 0.4292 L23: 0.2449 REMARK 3 S TENSOR REMARK 3 S11: 0.0072 S12: -0.0242 S13: -0.0262 REMARK 3 S21: -0.0259 S22: -0.0081 S23: -0.0771 REMARK 3 S31: -0.0239 S32: -0.0463 S33: 0.0046 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 112 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.1130 -4.0401 62.7816 REMARK 3 T TENSOR REMARK 3 T11: 0.0727 T22: 0.0467 REMARK 3 T33: 0.0325 T12: -0.0167 REMARK 3 T13: 0.0133 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 1.5094 L22: 1.5692 REMARK 3 L33: 1.4579 L12: 0.5467 REMARK 3 L13: -0.2603 L23: -0.3666 REMARK 3 S TENSOR REMARK 3 S11: 0.0330 S12: -0.0626 S13: -0.0524 REMARK 3 S21: 0.1454 S22: -0.0500 S23: 0.0487 REMARK 3 S31: 0.1312 S32: 0.0037 S33: 0.0050 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 189 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9192 -13.2345 62.1539 REMARK 3 T TENSOR REMARK 3 T11: 0.1869 T22: 0.0555 REMARK 3 T33: 0.0766 T12: -0.0024 REMARK 3 T13: 0.0176 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 3.9394 L22: 3.9563 REMARK 3 L33: 1.3614 L12: 1.8400 REMARK 3 L13: -0.9054 L23: -1.4588 REMARK 3 S TENSOR REMARK 3 S11: -0.1031 S12: -0.1757 S13: -0.3185 REMARK 3 S21: -0.0213 S22: 0.0028 S23: -0.1903 REMARK 3 S31: 0.3920 S32: 0.0689 S33: 0.1144 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 204 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3226 -12.9281 70.2854 REMARK 3 T TENSOR REMARK 3 T11: 0.2505 T22: 0.1661 REMARK 3 T33: 0.1461 T12: 0.0536 REMARK 3 T13: -0.0267 T23: 0.0301 REMARK 3 L TENSOR REMARK 3 L11: 2.7866 L22: 2.8104 REMARK 3 L33: 5.5177 L12: 1.2085 REMARK 3 L13: -1.0885 L23: -2.3866 REMARK 3 S TENSOR REMARK 3 S11: -0.0962 S12: -0.5375 S13: -0.0946 REMARK 3 S21: 0.3786 S22: 0.0407 S23: -0.3124 REMARK 3 S31: 0.3613 S32: 0.2083 S33: 0.1035 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.4939 7.6372 38.2789 REMARK 3 T TENSOR REMARK 3 T11: 0.0360 T22: 0.0278 REMARK 3 T33: 0.0869 T12: 0.0226 REMARK 3 T13: 0.0090 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 1.7828 L22: 1.9257 REMARK 3 L33: 3.0225 L12: 0.1656 REMARK 3 L13: -0.9792 L23: -0.3878 REMARK 3 S TENSOR REMARK 3 S11: 0.0810 S12: 0.0105 S13: 0.1261 REMARK 3 S21: -0.0675 S22: 0.0123 S23: -0.0468 REMARK 3 S31: -0.1900 S32: -0.1095 S33: -0.0658 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 26 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.4065 -0.6381 31.7595 REMARK 3 T TENSOR REMARK 3 T11: 0.0230 T22: 0.0198 REMARK 3 T33: 0.0326 T12: 0.0078 REMARK 3 T13: 0.0029 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 1.3964 L22: 1.4362 REMARK 3 L33: 1.4074 L12: 0.0787 REMARK 3 L13: -0.1527 L23: -0.1260 REMARK 3 S TENSOR REMARK 3 S11: 0.0028 S12: 0.0340 S13: 0.0213 REMARK 3 S21: -0.0620 S22: -0.0186 S23: 0.0297 REMARK 3 S31: 0.0346 S32: -0.0482 S33: 0.0092 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 76 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.8661 2.2445 40.8978 REMARK 3 T TENSOR REMARK 3 T11: 0.0428 T22: 0.0157 REMARK 3 T33: 0.0519 T12: 0.0069 REMARK 3 T13: 0.0011 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.6154 L22: 0.2406 REMARK 3 L33: 1.7903 L12: 0.0385 REMARK 3 L13: -0.1972 L23: -0.3904 REMARK 3 S TENSOR REMARK 3 S11: 0.0378 S12: -0.0821 S13: 0.0403 REMARK 3 S21: -0.0139 S22: -0.0091 S23: 0.0167 REMARK 3 S31: -0.1012 S32: -0.0067 S33: -0.0336 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 114 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2420 -2.8766 74.5284 REMARK 3 T TENSOR REMARK 3 T11: 0.0762 T22: 0.0965 REMARK 3 T33: 0.0229 T12: 0.0273 REMARK 3 T13: -0.0069 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 3.5560 L22: 2.9536 REMARK 3 L33: 2.4941 L12: 1.1655 REMARK 3 L13: 0.0697 L23: -0.0498 REMARK 3 S TENSOR REMARK 3 S11: -0.0520 S12: -0.0795 S13: -0.2486 REMARK 3 S21: 0.1218 S22: 0.0317 S23: -0.2103 REMARK 3 S31: 0.2073 S32: 0.2607 S33: -0.0153 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 129 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.4612 4.1191 68.9305 REMARK 3 T TENSOR REMARK 3 T11: 0.0631 T22: 0.0825 REMARK 3 T33: 0.0213 T12: 0.0033 REMARK 3 T13: 0.0059 T23: 0.0159 REMARK 3 L TENSOR REMARK 3 L11: 3.8690 L22: 1.0025 REMARK 3 L33: 3.2883 L12: 1.0202 REMARK 3 L13: 3.5086 L23: 0.9645 REMARK 3 S TENSOR REMARK 3 S11: -0.0997 S12: 0.1154 S13: 0.0609 REMARK 3 S21: 0.0067 S22: 0.0075 S23: 0.1159 REMARK 3 S31: -0.1988 S32: -0.0258 S33: 0.1154 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 151 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.2430 10.2216 72.2377 REMARK 3 T TENSOR REMARK 3 T11: 0.1074 T22: 0.0597 REMARK 3 T33: 0.0633 T12: -0.0073 REMARK 3 T13: 0.0057 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 0.2685 L22: 0.0896 REMARK 3 L33: 2.6683 L12: 0.0677 REMARK 3 L13: 0.6251 L23: 0.4577 REMARK 3 S TENSOR REMARK 3 S11: 0.0340 S12: 0.0729 S13: 0.0644 REMARK 3 S21: -0.0350 S22: 0.0486 S23: -0.0547 REMARK 3 S31: -0.3631 S32: 0.0288 S33: -0.0234 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 164 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6378 -3.1489 55.7825 REMARK 3 T TENSOR REMARK 3 T11: 0.0351 T22: 0.0818 REMARK 3 T33: 0.0366 T12: 0.0008 REMARK 3 T13: -0.0142 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 3.9865 L22: 1.7252 REMARK 3 L33: 6.0314 L12: 0.2921 REMARK 3 L13: 2.1666 L23: 2.4310 REMARK 3 S TENSOR REMARK 3 S11: 0.0786 S12: 0.0466 S13: -0.1607 REMARK 3 S21: 0.0416 S22: 0.0326 S23: -0.0649 REMARK 3 S31: 0.1984 S32: -0.0507 S33: -0.1592 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 175 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6711 5.6114 76.5011 REMARK 3 T TENSOR REMARK 3 T11: 0.0772 T22: 0.1922 REMARK 3 T33: 0.0119 T12: 0.0116 REMARK 3 T13: -0.0245 T23: -0.0673 REMARK 3 L TENSOR REMARK 3 L11: 2.4425 L22: 0.9172 REMARK 3 L33: 3.9298 L12: 0.1265 REMARK 3 L13: 1.8872 L23: -0.2822 REMARK 3 S TENSOR REMARK 3 S11: -0.1340 S12: -0.2726 S13: 0.1764 REMARK 3 S21: 0.1223 S22: 0.1173 S23: -0.1066 REMARK 3 S31: -0.2546 S32: 0.2779 S33: 0.0452 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 189 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.6925 2.3434 78.9979 REMARK 3 T TENSOR REMARK 3 T11: 0.1001 T22: 0.1187 REMARK 3 T33: 0.0415 T12: 0.0384 REMARK 3 T13: 0.0234 T23: -0.0246 REMARK 3 L TENSOR REMARK 3 L11: 3.6564 L22: 1.1944 REMARK 3 L33: 2.9736 L12: 0.3737 REMARK 3 L13: 1.5986 L23: 0.4370 REMARK 3 S TENSOR REMARK 3 S11: -0.0534 S12: -0.2104 S13: -0.0987 REMARK 3 S21: 0.2077 S22: -0.0054 S23: 0.1426 REMARK 3 S31: 0.1270 S32: -0.2664 S33: 0.0249 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9MZC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JAN-25. REMARK 100 THE DEPOSITION ID IS D_1000292123. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-24 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62430 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 47.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.16700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 1.07000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.09M NPS, 0.1M BS1 PH6.5, 50 % V/V, REMARK 280 PM2 (POLYMER), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.12000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.70000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.41000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.70000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.12000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.41000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 42 CG CD CE NZ REMARK 470 LYS L 126 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG H 16 -163.07 -123.44 REMARK 500 ASP H 100E 44.17 -144.60 REMARK 500 ASP H 144 66.86 69.50 REMARK 500 THR L 51 -47.47 74.29 REMARK 500 THR L 51 -47.47 73.13 REMARK 500 ALA L 84 176.36 176.12 REMARK 500 TRP L 94 -131.42 39.01 REMARK 500 TRP L 94 -141.49 62.15 REMARK 500 ASN L 138 65.15 60.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9MUY RELATED DB: PDB REMARK 900 RELATED ID: 9MUZ RELATED DB: PDB REMARK 900 RELATED ID: 9MVJ RELATED DB: PDB DBREF 9MZC H 1 217 PDB 9MZC 9MZC 1 217 DBREF 9MZC L 1 214 PDB 9MZC 9MZC 1 214 SEQRES 1 H 228 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 228 PRO GLY ARG SER MET LYS LEU SER CYS ALA ALA SER GLY SEQRES 3 H 228 PHE ILE PHE SER ASN TYR GLY MET ALA TRP VAL ARG GLN SEQRES 4 H 228 ALA PRO LYS LYS GLY LEU GLU TRP VAL ALA TYR ILE ASN SEQRES 5 H 228 TYR ASP GLY GLY THR THR TYR TYR ARG ASP SER VAL LYS SEQRES 6 H 228 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS SER THR SEQRES 7 H 228 LEU TYR LEU GLN MET ASP SER LEU ARG SER GLU ASP THR SEQRES 8 H 228 ALA THR TYR TYR CYS THR THR GLY TYR TYR TYR ASP GLY SEQRES 9 H 228 SER TYR TYR TYR ASP ARG PHE VAL TYR TRP GLY GLN GLY SEQRES 10 H 228 THR LEU VAL THR VAL SER SER ALA SER THR LYS GLY PRO SEQRES 11 H 228 SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER SEQRES 12 H 228 GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR SEQRES 13 H 228 PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA SEQRES 14 H 228 LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 H 228 SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL SEQRES 16 H 228 PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN SEQRES 17 H 228 VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS SEQRES 18 H 228 VAL GLU PRO LYS SER CYS ASP SEQRES 1 L 213 ASP ILE GLN MET THR GLN SER PRO SER PHE LEU SER ALA SEQRES 2 L 213 SER GLU GLY GLU ARG VAL THR LEU ASN CYS ARG ALA SER SEQRES 3 L 213 GLN ASN ILE ASN LYS TYR LEU ASP TRP TYR GLN GLN LYS SEQRES 4 L 213 LEU GLY GLU ALA PRO LYS LEU LEU ILE TYR ASN THR ASN SEQRES 5 L 213 ASN LEU HIS THR GLY ILE PRO SER ARG PHE SER GLY SER SEQRES 6 L 213 GLY SER GLY THR ASP TYR THR ILE THR ILE SER SER LEU SEQRES 7 L 213 GLN PRO GLU ASP VAL ALA THR TYR PHE CYS LEU GLN ARG SEQRES 8 L 213 ASN SER TRP TYR THR PHE GLY ALA GLY THR LYS LEU GLU SEQRES 9 L 213 LEU LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE SEQRES 10 L 213 PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER SEQRES 11 L 213 VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA SEQRES 12 L 213 LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY SEQRES 13 L 213 ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SEQRES 14 L 213 SER THR TYR SER LEU SER SER THR LEU THR LEU SER LYS SEQRES 15 L 213 ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL SEQRES 16 L 213 THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE SEQRES 17 L 213 ASN ARG GLY GLU CYS HET EDO H 301 4 HET EDO H 302 4 HET EDO H 303 4 HET EDO H 304 4 HET EDO H 305 4 HET EDO H 306 4 HET NO3 H 307 4 HET NO3 H 308 4 HET EDO L 301 4 HET EDO L 302 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM NO3 NITRATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 8(C2 H6 O2) FORMUL 9 NO3 2(N O3 1-) FORMUL 13 HOH *606(H2 O) HELIX 1 AA1 ILE H 28 TYR H 32 5 5 HELIX 2 AA2 ASP H 61 LYS H 64 5 4 HELIX 3 AA3 ASN H 73 LYS H 75 5 3 HELIX 4 AA4 ARG H 83 THR H 87 5 5 HELIX 5 AA5 SER H 156 ALA H 158 5 3 HELIX 6 AA6 SER H 187 LEU H 189 5 3 HELIX 7 AA7 LYS H 201 ASN H 204 5 4 HELIX 8 AA8 GLN L 79 VAL L 83 5 5 HELIX 9 AA9 SER L 121 LYS L 126 1 6 HELIX 10 AB1 LYS L 183 LYS L 188 1 6 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 MET H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AA1 4 THR H 77 MET H 82 -1 O MET H 82 N MET H 18 SHEET 4 AA1 4 PHE H 67 ASP H 72 -1 N SER H 70 O TYR H 79 SHEET 1 AA2 6 GLY H 10 VAL H 12 0 SHEET 2 AA2 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA2 6 ALA H 88 THR H 94 -1 N ALA H 88 O VAL H 109 SHEET 4 AA2 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 THR H 57 TYR H 59 -1 O TYR H 58 N TYR H 50 SHEET 1 AA3 2 TYR H 97 TYR H 98 0 SHEET 2 AA3 2 TYR H 100B TYR H 100C-1 O TYR H 100C N TYR H 97 SHEET 1 AA4 4 SER H 120 LEU H 124 0 SHEET 2 AA4 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA4 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA4 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA5 4 SER H 120 LEU H 124 0 SHEET 2 AA5 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA5 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA5 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AA6 3 THR H 151 TRP H 154 0 SHEET 2 AA6 3 ILE H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AA6 3 THR H 205 LYS H 210 -1 O VAL H 207 N VAL H 198 SHEET 1 AA7 4 MET L 4 SER L 7 0 SHEET 2 AA7 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA7 4 ASP L 70 ILE L 75 -1 O ILE L 75 N VAL L 19 SHEET 4 AA7 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA8 6 PHE L 10 SER L 14 0 SHEET 2 AA8 6 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 AA8 6 ALA L 84 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AA8 6 LEU L 33 GLN L 38 -1 N TYR L 36 O PHE L 87 SHEET 5 AA8 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AA8 6 ASN L 53 LEU L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 AA9 4 PHE L 10 SER L 14 0 SHEET 2 AA9 4 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 AA9 4 ALA L 84 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AA9 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AB1 4 SER L 114 PHE L 118 0 SHEET 2 AB1 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB1 4 TYR L 173 SER L 182 -1 O LEU L 181 N ALA L 130 SHEET 4 AB1 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB2 4 ALA L 153 LEU L 154 0 SHEET 2 AB2 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB2 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 AB2 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.02 SSBOND 2 CYS H 140 CYS H 196 1555 1555 2.03 SSBOND 3 CYS H 216 CYS L 214 1555 1555 2.05 SSBOND 4 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 5 CYS L 134 CYS L 194 1555 1555 2.02 CISPEP 1 PHE H 146 PRO H 147 0 -7.69 CISPEP 2 GLU H 148 PRO H 149 0 0.88 CISPEP 3 SER L 7 PRO L 8 0 -3.91 CISPEP 4 SER L 7 PRO L 8 0 -9.14 CISPEP 5 TYR L 140 PRO L 141 0 4.24 CRYST1 50.240 64.820 139.400 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019904 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015427 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007174 0.00000 CONECT 165 778 CONECT 778 165 CONECT 1201 1647 CONECT 1647 1201 CONECT 1803 3618 CONECT 2027 2590 CONECT 2028 2591 CONECT 2590 2027 CONECT 2591 2028 CONECT 2954 3458 CONECT 2955 3459 CONECT 3458 2954 CONECT 3459 2955 CONECT 3618 1803 CONECT 3621 3622 3623 CONECT 3622 3621 CONECT 3623 3621 3624 CONECT 3624 3623 CONECT 3625 3626 3627 CONECT 3626 3625 CONECT 3627 3625 3628 CONECT 3628 3627 CONECT 3629 3630 3631 CONECT 3630 3629 CONECT 3631 3629 3632 CONECT 3632 3631 CONECT 3633 3634 3635 CONECT 3634 3633 CONECT 3635 3633 3636 CONECT 3636 3635 CONECT 3637 3638 3639 CONECT 3638 3637 CONECT 3639 3637 3640 CONECT 3640 3639 CONECT 3641 3642 3643 CONECT 3642 3641 CONECT 3643 3641 3644 CONECT 3644 3643 CONECT 3645 3646 3647 3648 CONECT 3646 3645 CONECT 3647 3645 CONECT 3648 3645 CONECT 3649 3650 3651 3652 CONECT 3650 3649 CONECT 3651 3649 CONECT 3652 3649 CONECT 3653 3654 3655 CONECT 3654 3653 CONECT 3655 3653 3656 CONECT 3656 3655 CONECT 3657 3658 3659 CONECT 3658 3657 CONECT 3659 3657 3660 CONECT 3660 3659 MASTER 456 0 10 10 45 0 0 6 4028 2 54 35 END