data_9N0W # _entry.id 9N0W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.409 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9N0W pdb_00009n0w 10.2210/pdb9n0w/pdb WWPDB D_1000291995 ? ? EMDB EMD-48796 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-12-24 ? 2 'EM metadata' 1 0 2025-12-24 ? 3 FSC 1 0 2025-12-24 ? 4 'Half map' 1 0 2025-12-24 1 5 'Half map' 1 0 2025-12-24 2 6 Image 1 0 2025-12-24 ? 7 Mask 1 0 2025-12-24 1 8 Mask 1 0 2025-12-24 2 9 'Primary map' 1 0 2025-12-24 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 Mask repository 'Initial release' ? ? 8 8 Mask repository 'Initial release' ? ? 9 9 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9N0W _pdbx_database_status.recvd_initial_deposition_date 2025-01-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB . EMD-48795 'other EM volume' EMDB 'HTLV-1 Gag capsid from immature particles' EMD-48796 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 4 mansky@umn.edu Louis Mansky M 'principal investigator/group leader' 0000-0003-2391-1061 5 zhangwei@umn.edu Wei Zhang ? 'principal investigator/group leader' 0000-0002-9888-3889 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Arndt, W.G.' 1 0000-0001-8409-3133 'Ramezani, A.' 2 ? 'Chen, B.' 3 0000-0001-5589-2075 'Perilla, J.R.' 4 0000-0003-1171-6816 'Zhang, W.' 5 0000-0002-9888-3889 'Mansky, L.M.' 6 0000-0003-2391-1061 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'High-resolution analysis of the human T-cell leukemia virus capsid protein reveals insights into immature particle morphology.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-025-67129-1 _citation.pdbx_database_id_PubMed 41381513 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Arndt, W.G.' 1 0000-0001-8409-3133 primary 'Ramezani, A.' 2 0000-0003-0570-9935 primary 'Talledge, N.' 3 ? primary 'Yu, G.' 4 ? primary 'Yang, H.' 5 0000-0003-0539-0477 primary 'Chen, B.' 6 0000-0001-5589-2075 primary 'Perilla, J.R.' 7 0000-0003-1171-6816 primary 'Zhang, W.' 8 0000-0002-9888-3889 primary 'Mansky, L.M.' 9 0000-0003-2391-1061 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Gag protein' _entity.formula_weight 21435.182 _entity.pdbx_number_of_molecules 3 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;WQMKDLQAIKQEVSQAAPGSPQFMQTIRLAVQQFDPTAKDLQDLLQYLCSSLVASLHHQQLDSLISEAETRGITGYNPLA GPLRVQANNPQQQGLRREYQQLWLAAFAALPGSAKDPSWASILQGLEEPYHAFVERLNIALDNGLPEGTPKDPILRSLAY SNANKECQKLLQARGHTNSPLGDMLRACQTWTP ; _entity_poly.pdbx_seq_one_letter_code_can ;WQMKDLQAIKQEVSQAAPGSPQFMQTIRLAVQQFDPTAKDLQDLLQYLCSSLVASLHHQQLDSLISEAETRGITGYNPLA GPLRVQANNPQQQGLRREYQQLWLAAFAALPGSAKDPSWASILQGLEEPYHAFVERLNIALDNGLPEGTPKDPILRSLAY SNANKECQKLLQARGHTNSPLGDMLRACQTWTP ; _entity_poly.pdbx_strand_id B,C,A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TRP n 1 2 GLN n 1 3 MET n 1 4 LYS n 1 5 ASP n 1 6 LEU n 1 7 GLN n 1 8 ALA n 1 9 ILE n 1 10 LYS n 1 11 GLN n 1 12 GLU n 1 13 VAL n 1 14 SER n 1 15 GLN n 1 16 ALA n 1 17 ALA n 1 18 PRO n 1 19 GLY n 1 20 SER n 1 21 PRO n 1 22 GLN n 1 23 PHE n 1 24 MET n 1 25 GLN n 1 26 THR n 1 27 ILE n 1 28 ARG n 1 29 LEU n 1 30 ALA n 1 31 VAL n 1 32 GLN n 1 33 GLN n 1 34 PHE n 1 35 ASP n 1 36 PRO n 1 37 THR n 1 38 ALA n 1 39 LYS n 1 40 ASP n 1 41 LEU n 1 42 GLN n 1 43 ASP n 1 44 LEU n 1 45 LEU n 1 46 GLN n 1 47 TYR n 1 48 LEU n 1 49 CYS n 1 50 SER n 1 51 SER n 1 52 LEU n 1 53 VAL n 1 54 ALA n 1 55 SER n 1 56 LEU n 1 57 HIS n 1 58 HIS n 1 59 GLN n 1 60 GLN n 1 61 LEU n 1 62 ASP n 1 63 SER n 1 64 LEU n 1 65 ILE n 1 66 SER n 1 67 GLU n 1 68 ALA n 1 69 GLU n 1 70 THR n 1 71 ARG n 1 72 GLY n 1 73 ILE n 1 74 THR n 1 75 GLY n 1 76 TYR n 1 77 ASN n 1 78 PRO n 1 79 LEU n 1 80 ALA n 1 81 GLY n 1 82 PRO n 1 83 LEU n 1 84 ARG n 1 85 VAL n 1 86 GLN n 1 87 ALA n 1 88 ASN n 1 89 ASN n 1 90 PRO n 1 91 GLN n 1 92 GLN n 1 93 GLN n 1 94 GLY n 1 95 LEU n 1 96 ARG n 1 97 ARG n 1 98 GLU n 1 99 TYR n 1 100 GLN n 1 101 GLN n 1 102 LEU n 1 103 TRP n 1 104 LEU n 1 105 ALA n 1 106 ALA n 1 107 PHE n 1 108 ALA n 1 109 ALA n 1 110 LEU n 1 111 PRO n 1 112 GLY n 1 113 SER n 1 114 ALA n 1 115 LYS n 1 116 ASP n 1 117 PRO n 1 118 SER n 1 119 TRP n 1 120 ALA n 1 121 SER n 1 122 ILE n 1 123 LEU n 1 124 GLN n 1 125 GLY n 1 126 LEU n 1 127 GLU n 1 128 GLU n 1 129 PRO n 1 130 TYR n 1 131 HIS n 1 132 ALA n 1 133 PHE n 1 134 VAL n 1 135 GLU n 1 136 ARG n 1 137 LEU n 1 138 ASN n 1 139 ILE n 1 140 ALA n 1 141 LEU n 1 142 ASP n 1 143 ASN n 1 144 GLY n 1 145 LEU n 1 146 PRO n 1 147 GLU n 1 148 GLY n 1 149 THR n 1 150 PRO n 1 151 LYS n 1 152 ASP n 1 153 PRO n 1 154 ILE n 1 155 LEU n 1 156 ARG n 1 157 SER n 1 158 LEU n 1 159 ALA n 1 160 TYR n 1 161 SER n 1 162 ASN n 1 163 ALA n 1 164 ASN n 1 165 LYS n 1 166 GLU n 1 167 CYS n 1 168 GLN n 1 169 LYS n 1 170 LEU n 1 171 LEU n 1 172 GLN n 1 173 ALA n 1 174 ARG n 1 175 GLY n 1 176 HIS n 1 177 THR n 1 178 ASN n 1 179 SER n 1 180 PRO n 1 181 LEU n 1 182 GLY n 1 183 ASP n 1 184 MET n 1 185 LEU n 1 186 ARG n 1 187 ALA n 1 188 CYS n 1 189 GLN n 1 190 THR n 1 191 TRP n 1 192 THR n 1 193 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 193 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gag _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain B1033-2009 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human T-cell leukemia virus type I' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11908 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 293T _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TRP 1 15 15 TRP TRP B . n A 1 2 GLN 2 16 16 GLN GLN B . n A 1 3 MET 3 17 17 MET MET B . n A 1 4 LYS 4 18 18 LYS LYS B . n A 1 5 ASP 5 19 19 ASP ASP B . n A 1 6 LEU 6 20 20 LEU LEU B . n A 1 7 GLN 7 21 21 GLN GLN B . n A 1 8 ALA 8 22 22 ALA ALA B . n A 1 9 ILE 9 23 23 ILE ILE B . n A 1 10 LYS 10 24 24 LYS LYS B . n A 1 11 GLN 11 25 25 GLN GLN B . n A 1 12 GLU 12 26 26 GLU GLU B . n A 1 13 VAL 13 27 27 VAL VAL B . n A 1 14 SER 14 28 28 SER SER B . n A 1 15 GLN 15 29 29 GLN GLN B . n A 1 16 ALA 16 30 30 ALA ALA B . n A 1 17 ALA 17 31 31 ALA ALA B . n A 1 18 PRO 18 32 32 PRO PRO B . n A 1 19 GLY 19 33 33 GLY GLY B . n A 1 20 SER 20 34 34 SER SER B . n A 1 21 PRO 21 35 35 PRO PRO B . n A 1 22 GLN 22 36 36 GLN GLN B . n A 1 23 PHE 23 37 37 PHE PHE B . n A 1 24 MET 24 38 38 MET MET B . n A 1 25 GLN 25 39 39 GLN GLN B . n A 1 26 THR 26 40 40 THR THR B . n A 1 27 ILE 27 41 41 ILE ILE B . n A 1 28 ARG 28 42 42 ARG ARG B . n A 1 29 LEU 29 43 43 LEU LEU B . n A 1 30 ALA 30 44 44 ALA ALA B . n A 1 31 VAL 31 45 45 VAL VAL B . n A 1 32 GLN 32 46 46 GLN GLN B . n A 1 33 GLN 33 47 47 GLN GLN B . n A 1 34 PHE 34 48 48 PHE PHE B . n A 1 35 ASP 35 49 49 ASP ASP B . n A 1 36 PRO 36 50 50 PRO PRO B . n A 1 37 THR 37 51 51 THR THR B . n A 1 38 ALA 38 52 52 ALA ALA B . n A 1 39 LYS 39 53 53 LYS LYS B . n A 1 40 ASP 40 54 54 ASP ASP B . n A 1 41 LEU 41 55 55 LEU LEU B . n A 1 42 GLN 42 56 56 GLN GLN B . n A 1 43 ASP 43 57 57 ASP ASP B . n A 1 44 LEU 44 58 58 LEU LEU B . n A 1 45 LEU 45 59 59 LEU LEU B . n A 1 46 GLN 46 60 60 GLN GLN B . n A 1 47 TYR 47 61 61 TYR TYR B . n A 1 48 LEU 48 62 62 LEU LEU B . n A 1 49 CYS 49 63 63 CYS CYS B . n A 1 50 SER 50 64 64 SER SER B . n A 1 51 SER 51 65 65 SER SER B . n A 1 52 LEU 52 66 66 LEU LEU B . n A 1 53 VAL 53 67 67 VAL VAL B . n A 1 54 ALA 54 68 68 ALA ALA B . n A 1 55 SER 55 69 69 SER SER B . n A 1 56 LEU 56 70 70 LEU LEU B . n A 1 57 HIS 57 71 71 HIS HIS B . n A 1 58 HIS 58 72 72 HIS HIS B . n A 1 59 GLN 59 73 73 GLN GLN B . n A 1 60 GLN 60 74 74 GLN GLN B . n A 1 61 LEU 61 75 75 LEU LEU B . n A 1 62 ASP 62 76 76 ASP ASP B . n A 1 63 SER 63 77 77 SER SER B . n A 1 64 LEU 64 78 78 LEU LEU B . n A 1 65 ILE 65 79 79 ILE ILE B . n A 1 66 SER 66 80 80 SER SER B . n A 1 67 GLU 67 81 81 GLU GLU B . n A 1 68 ALA 68 82 82 ALA ALA B . n A 1 69 GLU 69 83 83 GLU GLU B . n A 1 70 THR 70 84 84 THR THR B . n A 1 71 ARG 71 85 85 ARG ARG B . n A 1 72 GLY 72 86 86 GLY GLY B . n A 1 73 ILE 73 87 87 ILE ILE B . n A 1 74 THR 74 88 88 THR THR B . n A 1 75 GLY 75 89 89 GLY GLY B . n A 1 76 TYR 76 90 90 TYR TYR B . n A 1 77 ASN 77 91 91 ASN ASN B . n A 1 78 PRO 78 92 92 PRO PRO B . n A 1 79 LEU 79 93 93 LEU LEU B . n A 1 80 ALA 80 94 94 ALA ALA B . n A 1 81 GLY 81 95 95 GLY GLY B . n A 1 82 PRO 82 96 96 PRO PRO B . n A 1 83 LEU 83 97 97 LEU LEU B . n A 1 84 ARG 84 98 98 ARG ARG B . n A 1 85 VAL 85 99 99 VAL VAL B . n A 1 86 GLN 86 100 100 GLN GLN B . n A 1 87 ALA 87 101 101 ALA ALA B . n A 1 88 ASN 88 102 102 ASN ASN B . n A 1 89 ASN 89 103 103 ASN ASN B . n A 1 90 PRO 90 104 104 PRO PRO B . n A 1 91 GLN 91 105 105 GLN GLN B . n A 1 92 GLN 92 106 106 GLN GLN B . n A 1 93 GLN 93 107 107 GLN GLN B . n A 1 94 GLY 94 108 108 GLY GLY B . n A 1 95 LEU 95 109 109 LEU LEU B . n A 1 96 ARG 96 110 110 ARG ARG B . n A 1 97 ARG 97 111 111 ARG ARG B . n A 1 98 GLU 98 112 112 GLU GLU B . n A 1 99 TYR 99 113 113 TYR TYR B . n A 1 100 GLN 100 114 114 GLN GLN B . n A 1 101 GLN 101 115 115 GLN GLN B . n A 1 102 LEU 102 116 116 LEU LEU B . n A 1 103 TRP 103 117 117 TRP TRP B . n A 1 104 LEU 104 118 118 LEU LEU B . n A 1 105 ALA 105 119 119 ALA ALA B . n A 1 106 ALA 106 120 120 ALA ALA B . n A 1 107 PHE 107 121 121 PHE PHE B . n A 1 108 ALA 108 122 122 ALA ALA B . n A 1 109 ALA 109 123 123 ALA ALA B . n A 1 110 LEU 110 124 124 LEU LEU B . n A 1 111 PRO 111 125 125 PRO PRO B . n A 1 112 GLY 112 126 126 GLY GLY B . n A 1 113 SER 113 127 127 SER SER B . n A 1 114 ALA 114 128 128 ALA ALA B . n A 1 115 LYS 115 129 129 LYS LYS B . n A 1 116 ASP 116 130 130 ASP ASP B . n A 1 117 PRO 117 131 131 PRO PRO B . n A 1 118 SER 118 132 132 SER SER B . n A 1 119 TRP 119 133 133 TRP TRP B . n A 1 120 ALA 120 134 134 ALA ALA B . n A 1 121 SER 121 135 135 SER SER B . n A 1 122 ILE 122 136 136 ILE ILE B . n A 1 123 LEU 123 137 137 LEU LEU B . n A 1 124 GLN 124 138 138 GLN GLN B . n A 1 125 GLY 125 139 139 GLY GLY B . n A 1 126 LEU 126 140 140 LEU LEU B . n A 1 127 GLU 127 141 141 GLU GLU B . n A 1 128 GLU 128 142 142 GLU GLU B . n A 1 129 PRO 129 143 143 PRO PRO B . n A 1 130 TYR 130 144 144 TYR TYR B . n A 1 131 HIS 131 145 145 HIS HIS B . n A 1 132 ALA 132 146 146 ALA ALA B . n A 1 133 PHE 133 147 147 PHE PHE B . n A 1 134 VAL 134 148 148 VAL VAL B . n A 1 135 GLU 135 149 149 GLU GLU B . n A 1 136 ARG 136 150 150 ARG ARG B . n A 1 137 LEU 137 151 151 LEU LEU B . n A 1 138 ASN 138 152 152 ASN ASN B . n A 1 139 ILE 139 153 153 ILE ILE B . n A 1 140 ALA 140 154 154 ALA ALA B . n A 1 141 LEU 141 155 155 LEU LEU B . n A 1 142 ASP 142 156 156 ASP ASP B . n A 1 143 ASN 143 157 157 ASN ASN B . n A 1 144 GLY 144 158 158 GLY GLY B . n A 1 145 LEU 145 159 159 LEU LEU B . n A 1 146 PRO 146 160 160 PRO PRO B . n A 1 147 GLU 147 161 161 GLU GLU B . n A 1 148 GLY 148 162 162 GLY GLY B . n A 1 149 THR 149 163 163 THR THR B . n A 1 150 PRO 150 164 164 PRO PRO B . n A 1 151 LYS 151 165 165 LYS LYS B . n A 1 152 ASP 152 166 166 ASP ASP B . n A 1 153 PRO 153 167 167 PRO PRO B . n A 1 154 ILE 154 168 168 ILE ILE B . n A 1 155 LEU 155 169 169 LEU LEU B . n A 1 156 ARG 156 170 170 ARG ARG B . n A 1 157 SER 157 171 171 SER SER B . n A 1 158 LEU 158 172 172 LEU LEU B . n A 1 159 ALA 159 173 173 ALA ALA B . n A 1 160 TYR 160 174 174 TYR TYR B . n A 1 161 SER 161 175 175 SER SER B . n A 1 162 ASN 162 176 176 ASN ASN B . n A 1 163 ALA 163 177 177 ALA ALA B . n A 1 164 ASN 164 178 178 ASN ASN B . n A 1 165 LYS 165 179 179 LYS LYS B . n A 1 166 GLU 166 180 180 GLU GLU B . n A 1 167 CYS 167 181 181 CYS CYS B . n A 1 168 GLN 168 182 182 GLN GLN B . n A 1 169 LYS 169 183 183 LYS LYS B . n A 1 170 LEU 170 184 184 LEU LEU B . n A 1 171 LEU 171 185 185 LEU LEU B . n A 1 172 GLN 172 186 186 GLN GLN B . n A 1 173 ALA 173 187 187 ALA ALA B . n A 1 174 ARG 174 188 188 ARG ARG B . n A 1 175 GLY 175 189 189 GLY GLY B . n A 1 176 HIS 176 190 190 HIS HIS B . n A 1 177 THR 177 191 191 THR THR B . n A 1 178 ASN 178 192 192 ASN ASN B . n A 1 179 SER 179 193 193 SER SER B . n A 1 180 PRO 180 194 194 PRO PRO B . n A 1 181 LEU 181 195 195 LEU LEU B . n A 1 182 GLY 182 196 196 GLY GLY B . n A 1 183 ASP 183 197 197 ASP ASP B . n A 1 184 MET 184 198 198 MET MET B . n A 1 185 LEU 185 199 199 LEU LEU B . n A 1 186 ARG 186 200 200 ARG ARG B . n A 1 187 ALA 187 201 201 ALA ALA B . n A 1 188 CYS 188 202 202 CYS CYS B . n A 1 189 GLN 189 203 203 GLN GLN B . n A 1 190 THR 190 204 204 THR THR B . n A 1 191 TRP 191 205 205 TRP TRP B . n A 1 192 THR 192 206 206 THR THR B . n A 1 193 PRO 193 207 207 PRO PRO B . n B 1 1 TRP 1 15 15 TRP TRP C . n B 1 2 GLN 2 16 16 GLN GLN C . n B 1 3 MET 3 17 17 MET MET C . n B 1 4 LYS 4 18 18 LYS LYS C . n B 1 5 ASP 5 19 19 ASP ASP C . n B 1 6 LEU 6 20 20 LEU LEU C . n B 1 7 GLN 7 21 21 GLN GLN C . n B 1 8 ALA 8 22 22 ALA ALA C . n B 1 9 ILE 9 23 23 ILE ILE C . n B 1 10 LYS 10 24 24 LYS LYS C . n B 1 11 GLN 11 25 25 GLN GLN C . n B 1 12 GLU 12 26 26 GLU GLU C . n B 1 13 VAL 13 27 27 VAL VAL C . n B 1 14 SER 14 28 28 SER SER C . n B 1 15 GLN 15 29 29 GLN GLN C . n B 1 16 ALA 16 30 30 ALA ALA C . n B 1 17 ALA 17 31 31 ALA ALA C . n B 1 18 PRO 18 32 32 PRO PRO C . n B 1 19 GLY 19 33 33 GLY GLY C . n B 1 20 SER 20 34 34 SER SER C . n B 1 21 PRO 21 35 35 PRO PRO C . n B 1 22 GLN 22 36 36 GLN GLN C . n B 1 23 PHE 23 37 37 PHE PHE C . n B 1 24 MET 24 38 38 MET MET C . n B 1 25 GLN 25 39 39 GLN GLN C . n B 1 26 THR 26 40 40 THR THR C . n B 1 27 ILE 27 41 41 ILE ILE C . n B 1 28 ARG 28 42 42 ARG ARG C . n B 1 29 LEU 29 43 43 LEU LEU C . n B 1 30 ALA 30 44 44 ALA ALA C . n B 1 31 VAL 31 45 45 VAL VAL C . n B 1 32 GLN 32 46 46 GLN GLN C . n B 1 33 GLN 33 47 47 GLN GLN C . n B 1 34 PHE 34 48 48 PHE PHE C . n B 1 35 ASP 35 49 49 ASP ASP C . n B 1 36 PRO 36 50 50 PRO PRO C . n B 1 37 THR 37 51 51 THR THR C . n B 1 38 ALA 38 52 52 ALA ALA C . n B 1 39 LYS 39 53 53 LYS LYS C . n B 1 40 ASP 40 54 54 ASP ASP C . n B 1 41 LEU 41 55 55 LEU LEU C . n B 1 42 GLN 42 56 56 GLN GLN C . n B 1 43 ASP 43 57 57 ASP ASP C . n B 1 44 LEU 44 58 58 LEU LEU C . n B 1 45 LEU 45 59 59 LEU LEU C . n B 1 46 GLN 46 60 60 GLN GLN C . n B 1 47 TYR 47 61 61 TYR TYR C . n B 1 48 LEU 48 62 62 LEU LEU C . n B 1 49 CYS 49 63 63 CYS CYS C . n B 1 50 SER 50 64 64 SER SER C . n B 1 51 SER 51 65 65 SER SER C . n B 1 52 LEU 52 66 66 LEU LEU C . n B 1 53 VAL 53 67 67 VAL VAL C . n B 1 54 ALA 54 68 68 ALA ALA C . n B 1 55 SER 55 69 69 SER SER C . n B 1 56 LEU 56 70 70 LEU LEU C . n B 1 57 HIS 57 71 71 HIS HIS C . n B 1 58 HIS 58 72 72 HIS HIS C . n B 1 59 GLN 59 73 73 GLN GLN C . n B 1 60 GLN 60 74 74 GLN GLN C . n B 1 61 LEU 61 75 75 LEU LEU C . n B 1 62 ASP 62 76 76 ASP ASP C . n B 1 63 SER 63 77 77 SER SER C . n B 1 64 LEU 64 78 78 LEU LEU C . n B 1 65 ILE 65 79 79 ILE ILE C . n B 1 66 SER 66 80 80 SER SER C . n B 1 67 GLU 67 81 81 GLU GLU C . n B 1 68 ALA 68 82 82 ALA ALA C . n B 1 69 GLU 69 83 83 GLU GLU C . n B 1 70 THR 70 84 84 THR THR C . n B 1 71 ARG 71 85 85 ARG ARG C . n B 1 72 GLY 72 86 86 GLY GLY C . n B 1 73 ILE 73 87 87 ILE ILE C . n B 1 74 THR 74 88 88 THR THR C . n B 1 75 GLY 75 89 89 GLY GLY C . n B 1 76 TYR 76 90 90 TYR TYR C . n B 1 77 ASN 77 91 91 ASN ASN C . n B 1 78 PRO 78 92 92 PRO PRO C . n B 1 79 LEU 79 93 93 LEU LEU C . n B 1 80 ALA 80 94 94 ALA ALA C . n B 1 81 GLY 81 95 95 GLY GLY C . n B 1 82 PRO 82 96 96 PRO PRO C . n B 1 83 LEU 83 97 97 LEU LEU C . n B 1 84 ARG 84 98 98 ARG ARG C . n B 1 85 VAL 85 99 99 VAL VAL C . n B 1 86 GLN 86 100 100 GLN GLN C . n B 1 87 ALA 87 101 101 ALA ALA C . n B 1 88 ASN 88 102 102 ASN ASN C . n B 1 89 ASN 89 103 103 ASN ASN C . n B 1 90 PRO 90 104 104 PRO PRO C . n B 1 91 GLN 91 105 105 GLN GLN C . n B 1 92 GLN 92 106 106 GLN GLN C . n B 1 93 GLN 93 107 107 GLN GLN C . n B 1 94 GLY 94 108 108 GLY GLY C . n B 1 95 LEU 95 109 109 LEU LEU C . n B 1 96 ARG 96 110 110 ARG ARG C . n B 1 97 ARG 97 111 111 ARG ARG C . n B 1 98 GLU 98 112 112 GLU GLU C . n B 1 99 TYR 99 113 113 TYR TYR C . n B 1 100 GLN 100 114 114 GLN GLN C . n B 1 101 GLN 101 115 115 GLN GLN C . n B 1 102 LEU 102 116 116 LEU LEU C . n B 1 103 TRP 103 117 117 TRP TRP C . n B 1 104 LEU 104 118 118 LEU LEU C . n B 1 105 ALA 105 119 119 ALA ALA C . n B 1 106 ALA 106 120 120 ALA ALA C . n B 1 107 PHE 107 121 121 PHE PHE C . n B 1 108 ALA 108 122 122 ALA ALA C . n B 1 109 ALA 109 123 123 ALA ALA C . n B 1 110 LEU 110 124 124 LEU LEU C . n B 1 111 PRO 111 125 125 PRO PRO C . n B 1 112 GLY 112 126 126 GLY GLY C . n B 1 113 SER 113 127 127 SER SER C . n B 1 114 ALA 114 128 128 ALA ALA C . n B 1 115 LYS 115 129 129 LYS LYS C . n B 1 116 ASP 116 130 130 ASP ASP C . n B 1 117 PRO 117 131 131 PRO PRO C . n B 1 118 SER 118 132 132 SER SER C . n B 1 119 TRP 119 133 133 TRP TRP C . n B 1 120 ALA 120 134 134 ALA ALA C . n B 1 121 SER 121 135 135 SER SER C . n B 1 122 ILE 122 136 136 ILE ILE C . n B 1 123 LEU 123 137 137 LEU LEU C . n B 1 124 GLN 124 138 138 GLN GLN C . n B 1 125 GLY 125 139 139 GLY GLY C . n B 1 126 LEU 126 140 140 LEU LEU C . n B 1 127 GLU 127 141 141 GLU GLU C . n B 1 128 GLU 128 142 142 GLU GLU C . n B 1 129 PRO 129 143 143 PRO PRO C . n B 1 130 TYR 130 144 144 TYR TYR C . n B 1 131 HIS 131 145 145 HIS HIS C . n B 1 132 ALA 132 146 146 ALA ALA C . n B 1 133 PHE 133 147 147 PHE PHE C . n B 1 134 VAL 134 148 148 VAL VAL C . n B 1 135 GLU 135 149 149 GLU GLU C . n B 1 136 ARG 136 150 150 ARG ARG C . n B 1 137 LEU 137 151 151 LEU LEU C . n B 1 138 ASN 138 152 152 ASN ASN C . n B 1 139 ILE 139 153 153 ILE ILE C . n B 1 140 ALA 140 154 154 ALA ALA C . n B 1 141 LEU 141 155 155 LEU LEU C . n B 1 142 ASP 142 156 156 ASP ASP C . n B 1 143 ASN 143 157 157 ASN ASN C . n B 1 144 GLY 144 158 158 GLY GLY C . n B 1 145 LEU 145 159 159 LEU LEU C . n B 1 146 PRO 146 160 160 PRO PRO C . n B 1 147 GLU 147 161 161 GLU GLU C . n B 1 148 GLY 148 162 162 GLY GLY C . n B 1 149 THR 149 163 163 THR THR C . n B 1 150 PRO 150 164 164 PRO PRO C . n B 1 151 LYS 151 165 165 LYS LYS C . n B 1 152 ASP 152 166 166 ASP ASP C . n B 1 153 PRO 153 167 167 PRO PRO C . n B 1 154 ILE 154 168 168 ILE ILE C . n B 1 155 LEU 155 169 169 LEU LEU C . n B 1 156 ARG 156 170 170 ARG ARG C . n B 1 157 SER 157 171 171 SER SER C . n B 1 158 LEU 158 172 172 LEU LEU C . n B 1 159 ALA 159 173 173 ALA ALA C . n B 1 160 TYR 160 174 174 TYR TYR C . n B 1 161 SER 161 175 175 SER SER C . n B 1 162 ASN 162 176 176 ASN ASN C . n B 1 163 ALA 163 177 177 ALA ALA C . n B 1 164 ASN 164 178 178 ASN ASN C . n B 1 165 LYS 165 179 179 LYS LYS C . n B 1 166 GLU 166 180 180 GLU GLU C . n B 1 167 CYS 167 181 181 CYS CYS C . n B 1 168 GLN 168 182 182 GLN GLN C . n B 1 169 LYS 169 183 183 LYS LYS C . n B 1 170 LEU 170 184 184 LEU LEU C . n B 1 171 LEU 171 185 185 LEU LEU C . n B 1 172 GLN 172 186 186 GLN GLN C . n B 1 173 ALA 173 187 187 ALA ALA C . n B 1 174 ARG 174 188 188 ARG ARG C . n B 1 175 GLY 175 189 189 GLY GLY C . n B 1 176 HIS 176 190 190 HIS HIS C . n B 1 177 THR 177 191 191 THR THR C . n B 1 178 ASN 178 192 192 ASN ASN C . n B 1 179 SER 179 193 193 SER SER C . n B 1 180 PRO 180 194 194 PRO PRO C . n B 1 181 LEU 181 195 195 LEU LEU C . n B 1 182 GLY 182 196 196 GLY GLY C . n B 1 183 ASP 183 197 197 ASP ASP C . n B 1 184 MET 184 198 198 MET MET C . n B 1 185 LEU 185 199 199 LEU LEU C . n B 1 186 ARG 186 200 200 ARG ARG C . n B 1 187 ALA 187 201 201 ALA ALA C . n B 1 188 CYS 188 202 202 CYS CYS C . n B 1 189 GLN 189 203 203 GLN GLN C . n B 1 190 THR 190 204 204 THR THR C . n B 1 191 TRP 191 205 205 TRP TRP C . n B 1 192 THR 192 206 206 THR THR C . n B 1 193 PRO 193 207 207 PRO PRO C . n C 1 1 TRP 1 15 15 TRP TRP A . n C 1 2 GLN 2 16 16 GLN GLN A . n C 1 3 MET 3 17 17 MET MET A . n C 1 4 LYS 4 18 18 LYS LYS A . n C 1 5 ASP 5 19 19 ASP ASP A . n C 1 6 LEU 6 20 20 LEU LEU A . n C 1 7 GLN 7 21 21 GLN GLN A . n C 1 8 ALA 8 22 22 ALA ALA A . n C 1 9 ILE 9 23 23 ILE ILE A . n C 1 10 LYS 10 24 24 LYS LYS A . n C 1 11 GLN 11 25 25 GLN GLN A . n C 1 12 GLU 12 26 26 GLU GLU A . n C 1 13 VAL 13 27 27 VAL VAL A . n C 1 14 SER 14 28 28 SER SER A . n C 1 15 GLN 15 29 29 GLN GLN A . n C 1 16 ALA 16 30 30 ALA ALA A . n C 1 17 ALA 17 31 31 ALA ALA A . n C 1 18 PRO 18 32 32 PRO PRO A . n C 1 19 GLY 19 33 33 GLY GLY A . n C 1 20 SER 20 34 34 SER SER A . n C 1 21 PRO 21 35 35 PRO PRO A . n C 1 22 GLN 22 36 36 GLN GLN A . n C 1 23 PHE 23 37 37 PHE PHE A . n C 1 24 MET 24 38 38 MET MET A . n C 1 25 GLN 25 39 39 GLN GLN A . n C 1 26 THR 26 40 40 THR THR A . n C 1 27 ILE 27 41 41 ILE ILE A . n C 1 28 ARG 28 42 42 ARG ARG A . n C 1 29 LEU 29 43 43 LEU LEU A . n C 1 30 ALA 30 44 44 ALA ALA A . n C 1 31 VAL 31 45 45 VAL VAL A . n C 1 32 GLN 32 46 46 GLN GLN A . n C 1 33 GLN 33 47 47 GLN GLN A . n C 1 34 PHE 34 48 48 PHE PHE A . n C 1 35 ASP 35 49 49 ASP ASP A . n C 1 36 PRO 36 50 50 PRO PRO A . n C 1 37 THR 37 51 51 THR THR A . n C 1 38 ALA 38 52 52 ALA ALA A . n C 1 39 LYS 39 53 53 LYS LYS A . n C 1 40 ASP 40 54 54 ASP ASP A . n C 1 41 LEU 41 55 55 LEU LEU A . n C 1 42 GLN 42 56 56 GLN GLN A . n C 1 43 ASP 43 57 57 ASP ASP A . n C 1 44 LEU 44 58 58 LEU LEU A . n C 1 45 LEU 45 59 59 LEU LEU A . n C 1 46 GLN 46 60 60 GLN GLN A . n C 1 47 TYR 47 61 61 TYR TYR A . n C 1 48 LEU 48 62 62 LEU LEU A . n C 1 49 CYS 49 63 63 CYS CYS A . n C 1 50 SER 50 64 64 SER SER A . n C 1 51 SER 51 65 65 SER SER A . n C 1 52 LEU 52 66 66 LEU LEU A . n C 1 53 VAL 53 67 67 VAL VAL A . n C 1 54 ALA 54 68 68 ALA ALA A . n C 1 55 SER 55 69 69 SER SER A . n C 1 56 LEU 56 70 70 LEU LEU A . n C 1 57 HIS 57 71 71 HIS HIS A . n C 1 58 HIS 58 72 72 HIS HIS A . n C 1 59 GLN 59 73 73 GLN GLN A . n C 1 60 GLN 60 74 74 GLN GLN A . n C 1 61 LEU 61 75 75 LEU LEU A . n C 1 62 ASP 62 76 76 ASP ASP A . n C 1 63 SER 63 77 77 SER SER A . n C 1 64 LEU 64 78 78 LEU LEU A . n C 1 65 ILE 65 79 79 ILE ILE A . n C 1 66 SER 66 80 80 SER SER A . n C 1 67 GLU 67 81 81 GLU GLU A . n C 1 68 ALA 68 82 82 ALA ALA A . n C 1 69 GLU 69 83 83 GLU GLU A . n C 1 70 THR 70 84 84 THR THR A . n C 1 71 ARG 71 85 85 ARG ARG A . n C 1 72 GLY 72 86 86 GLY GLY A . n C 1 73 ILE 73 87 87 ILE ILE A . n C 1 74 THR 74 88 88 THR THR A . n C 1 75 GLY 75 89 89 GLY GLY A . n C 1 76 TYR 76 90 90 TYR TYR A . n C 1 77 ASN 77 91 91 ASN ASN A . n C 1 78 PRO 78 92 92 PRO PRO A . n C 1 79 LEU 79 93 93 LEU LEU A . n C 1 80 ALA 80 94 94 ALA ALA A . n C 1 81 GLY 81 95 95 GLY GLY A . n C 1 82 PRO 82 96 96 PRO PRO A . n C 1 83 LEU 83 97 97 LEU LEU A . n C 1 84 ARG 84 98 98 ARG ARG A . n C 1 85 VAL 85 99 99 VAL VAL A . n C 1 86 GLN 86 100 100 GLN GLN A . n C 1 87 ALA 87 101 101 ALA ALA A . n C 1 88 ASN 88 102 102 ASN ASN A . n C 1 89 ASN 89 103 103 ASN ASN A . n C 1 90 PRO 90 104 104 PRO PRO A . n C 1 91 GLN 91 105 105 GLN GLN A . n C 1 92 GLN 92 106 106 GLN GLN A . n C 1 93 GLN 93 107 107 GLN GLN A . n C 1 94 GLY 94 108 108 GLY GLY A . n C 1 95 LEU 95 109 109 LEU LEU A . n C 1 96 ARG 96 110 110 ARG ARG A . n C 1 97 ARG 97 111 111 ARG ARG A . n C 1 98 GLU 98 112 112 GLU GLU A . n C 1 99 TYR 99 113 113 TYR TYR A . n C 1 100 GLN 100 114 114 GLN GLN A . n C 1 101 GLN 101 115 115 GLN GLN A . n C 1 102 LEU 102 116 116 LEU LEU A . n C 1 103 TRP 103 117 117 TRP TRP A . n C 1 104 LEU 104 118 118 LEU LEU A . n C 1 105 ALA 105 119 119 ALA ALA A . n C 1 106 ALA 106 120 120 ALA ALA A . n C 1 107 PHE 107 121 121 PHE PHE A . n C 1 108 ALA 108 122 122 ALA ALA A . n C 1 109 ALA 109 123 123 ALA ALA A . n C 1 110 LEU 110 124 124 LEU LEU A . n C 1 111 PRO 111 125 125 PRO PRO A . n C 1 112 GLY 112 126 126 GLY GLY A . n C 1 113 SER 113 127 127 SER SER A . n C 1 114 ALA 114 128 128 ALA ALA A . n C 1 115 LYS 115 129 129 LYS LYS A . n C 1 116 ASP 116 130 130 ASP ASP A . n C 1 117 PRO 117 131 131 PRO PRO A . n C 1 118 SER 118 132 132 SER SER A . n C 1 119 TRP 119 133 133 TRP TRP A . n C 1 120 ALA 120 134 134 ALA ALA A . n C 1 121 SER 121 135 135 SER SER A . n C 1 122 ILE 122 136 136 ILE ILE A . n C 1 123 LEU 123 137 137 LEU LEU A . n C 1 124 GLN 124 138 138 GLN GLN A . n C 1 125 GLY 125 139 139 GLY GLY A . n C 1 126 LEU 126 140 140 LEU LEU A . n C 1 127 GLU 127 141 141 GLU GLU A . n C 1 128 GLU 128 142 142 GLU GLU A . n C 1 129 PRO 129 143 143 PRO PRO A . n C 1 130 TYR 130 144 144 TYR TYR A . n C 1 131 HIS 131 145 145 HIS HIS A . n C 1 132 ALA 132 146 146 ALA ALA A . n C 1 133 PHE 133 147 147 PHE PHE A . n C 1 134 VAL 134 148 148 VAL VAL A . n C 1 135 GLU 135 149 149 GLU GLU A . n C 1 136 ARG 136 150 150 ARG ARG A . n C 1 137 LEU 137 151 151 LEU LEU A . n C 1 138 ASN 138 152 152 ASN ASN A . n C 1 139 ILE 139 153 153 ILE ILE A . n C 1 140 ALA 140 154 154 ALA ALA A . n C 1 141 LEU 141 155 155 LEU LEU A . n C 1 142 ASP 142 156 156 ASP ASP A . n C 1 143 ASN 143 157 157 ASN ASN A . n C 1 144 GLY 144 158 158 GLY GLY A . n C 1 145 LEU 145 159 159 LEU LEU A . n C 1 146 PRO 146 160 160 PRO PRO A . n C 1 147 GLU 147 161 161 GLU GLU A . n C 1 148 GLY 148 162 162 GLY GLY A . n C 1 149 THR 149 163 163 THR THR A . n C 1 150 PRO 150 164 164 PRO PRO A . n C 1 151 LYS 151 165 165 LYS LYS A . n C 1 152 ASP 152 166 166 ASP ASP A . n C 1 153 PRO 153 167 167 PRO PRO A . n C 1 154 ILE 154 168 168 ILE ILE A . n C 1 155 LEU 155 169 169 LEU LEU A . n C 1 156 ARG 156 170 170 ARG ARG A . n C 1 157 SER 157 171 171 SER SER A . n C 1 158 LEU 158 172 172 LEU LEU A . n C 1 159 ALA 159 173 173 ALA ALA A . n C 1 160 TYR 160 174 174 TYR TYR A . n C 1 161 SER 161 175 175 SER SER A . n C 1 162 ASN 162 176 176 ASN ASN A . n C 1 163 ALA 163 177 177 ALA ALA A . n C 1 164 ASN 164 178 178 ASN ASN A . n C 1 165 LYS 165 179 179 LYS LYS A . n C 1 166 GLU 166 180 180 GLU GLU A . n C 1 167 CYS 167 181 181 CYS CYS A . n C 1 168 GLN 168 182 182 GLN GLN A . n C 1 169 LYS 169 183 183 LYS LYS A . n C 1 170 LEU 170 184 184 LEU LEU A . n C 1 171 LEU 171 185 185 LEU LEU A . n C 1 172 GLN 172 186 186 GLN GLN A . n C 1 173 ALA 173 187 187 ALA ALA A . n C 1 174 ARG 174 188 188 ARG ARG A . n C 1 175 GLY 175 189 189 GLY GLY A . n C 1 176 HIS 176 190 190 HIS HIS A . n C 1 177 THR 177 191 191 THR THR A . n C 1 178 ASN 178 192 192 ASN ASN A . n C 1 179 SER 179 193 193 SER SER A . n C 1 180 PRO 180 194 194 PRO PRO A . n C 1 181 LEU 181 195 195 LEU LEU A . n C 1 182 GLY 182 196 196 GLY GLY A . n C 1 183 ASP 183 197 197 ASP ASP A . n C 1 184 MET 184 198 198 MET MET A . n C 1 185 LEU 185 199 199 LEU LEU A . n C 1 186 ARG 186 200 200 ARG ARG A . n C 1 187 ALA 187 201 201 ALA ALA A . n C 1 188 CYS 188 202 202 CYS CYS A . n C 1 189 GLN 189 203 203 GLN GLN A . n C 1 190 THR 190 204 204 THR THR A . n C 1 191 TRP 191 205 205 TRP TRP A . n C 1 192 THR 192 206 206 THR THR A . n C 1 193 PRO 193 207 207 PRO PRO A . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9N0W _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9N0W _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9N0W _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9N0W _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.44 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.004 ? 4623 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.635 ? 6291 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 4.095 ? 618 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.036 ? 687 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.008 ? 840 ? f_plane_restr ? ? # _struct.entry_id 9N0W _struct.title 'HTLV-1 Gag capsid from immature particles' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9N0W _struct_keywords.text 'Complex, virus, lattice, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q82230_9DELA _struct_ref.pdbx_db_accession Q82230 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;WQMKDLQAIKQEVSQAAPGSPQFMQTIRLAVQQFDPTAKDLQDLLQYLCSSLVASLHHQQLDSLISEAETRGITGYNPLA GPLRVQANNPQQQGLRREYQQLWLAAFAALPGSAKDPSWASILQGLEEPYHAFVERLNIALDNGLPEGTPKDPILRSLAY SNANKECQKLLQARGHTNSPLGDMLRACQTWTP ; _struct_ref.pdbx_align_begin 145 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9N0W B 1 ? 193 ? Q82230 145 ? 337 ? 15 207 2 1 9N0W C 1 ? 193 ? Q82230 145 ? 337 ? 15 207 3 1 9N0W A 1 ? 193 ? Q82230 145 ? 337 ? 15 207 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete point assembly' ? octadecameric 18 2 'point asymmetric unit' ? trimeric 3 3 'point asymmetric unit, std point frame' ? trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-6)' A,B,C 2 1 A,B,C 3 P A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? 0.99919750 -0.03997071 -0.00258917 -161.54078 0.03997061 0.99920085 -0.00008952 -175.52181 0.00259068 -0.00001404 0.99999664 -195.55028 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.50000336 -0.86602251 0.00128317 230.50596 0.86602248 0.50000000 -0.00225062 -61.40010 0.00130749 0.00223657 0.99999664 -0.59803 3 'point symmetry operation' ? ? -0.49998993 -0.86602255 0.00387384 398.93282 0.86602245 -0.50000000 -0.00226466 107.52454 0.00389817 0.00222253 0.99998993 -1.03200 4 'point symmetry operation' ? ? -0.99998658 -0.00000007 0.00518134 336.85371 -0.00000007 -1.00000000 -0.00002808 337.84929 0.00518134 -0.00002808 0.99998658 -0.86794 5 'point symmetry operation' ? ? -0.49998993 0.86602244 0.00389817 106.34775 -0.86602256 -0.50000000 0.00222253 399.24939 0.00387385 -0.00226465 0.99998993 -0.26991 6 'point symmetry operation' ? ? 0.50000335 0.86602248 0.00130750 -62.07911 -0.86602252 0.50000000 0.00223657 230.32474 0.00128318 -0.00225061 0.99999664 0.16406 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 2 ? SER A 14 ? GLN B 16 SER B 28 1 ? 13 HELX_P HELX_P2 AA2 SER A 20 ? ASP A 35 ? SER B 34 ASP B 49 1 ? 16 HELX_P HELX_P3 AA3 THR A 37 ? CYS A 49 ? THR B 51 CYS B 63 1 ? 13 HELX_P HELX_P4 AA4 SER A 50 ? GLY A 72 ? SER B 64 GLY B 86 1 ? 23 HELX_P HELX_P5 AA5 PRO A 82 ? ASN A 89 ? PRO B 96 ASN B 103 1 ? 8 HELX_P HELX_P6 AA6 GLN A 92 ? ALA A 114 ? GLN B 106 ALA B 128 1 ? 23 HELX_P HELX_P7 AA7 PRO A 117 ? ILE A 122 ? PRO B 131 ILE B 136 5 ? 6 HELX_P HELX_P8 AA8 PRO A 129 ? LEU A 145 ? PRO B 143 LEU B 159 1 ? 17 HELX_P HELX_P9 AA9 LYS A 151 ? ASN A 162 ? LYS B 165 ASN B 176 1 ? 12 HELX_P HELX_P10 AB1 ASN A 164 ? GLY A 175 ? ASN B 178 GLY B 189 1 ? 12 HELX_P HELX_P11 AB2 PRO A 180 ? CYS A 188 ? PRO B 194 CYS B 202 1 ? 9 HELX_P HELX_P12 AB3 GLN A 189 ? TRP A 191 ? GLN B 203 TRP B 205 5 ? 3 HELX_P HELX_P13 AB4 GLN B 2 ? VAL B 13 ? GLN C 16 VAL C 27 1 ? 12 HELX_P HELX_P14 AB5 SER B 20 ? ASP B 35 ? SER C 34 ASP C 49 1 ? 16 HELX_P HELX_P15 AB6 THR B 37 ? CYS B 49 ? THR C 51 CYS C 63 1 ? 13 HELX_P HELX_P16 AB7 SER B 50 ? GLY B 72 ? SER C 64 GLY C 86 1 ? 23 HELX_P HELX_P17 AB8 ASN B 77 ? GLY B 81 ? ASN C 91 GLY C 95 5 ? 5 HELX_P HELX_P18 AB9 PRO B 82 ? ALA B 87 ? PRO C 96 ALA C 101 1 ? 6 HELX_P HELX_P19 AC1 GLN B 92 ? ALA B 109 ? GLN C 106 ALA C 123 1 ? 18 HELX_P HELX_P20 AC2 LEU B 110 ? ALA B 114 ? LEU C 124 ALA C 128 5 ? 5 HELX_P HELX_P21 AC3 PRO B 129 ? LEU B 145 ? PRO C 143 LEU C 159 1 ? 17 HELX_P HELX_P22 AC4 PRO B 150 ? ASN B 162 ? PRO C 164 ASN C 176 1 ? 13 HELX_P HELX_P23 AC5 ASN B 164 ? GLY B 175 ? ASN C 178 GLY C 189 1 ? 12 HELX_P HELX_P24 AC6 PRO B 180 ? CYS B 188 ? PRO C 194 CYS C 202 1 ? 9 HELX_P HELX_P25 AC7 GLN B 189 ? TRP B 191 ? GLN C 203 TRP C 205 5 ? 3 HELX_P HELX_P26 AC8 GLN C 2 ? SER C 14 ? GLN A 16 SER A 28 1 ? 13 HELX_P HELX_P27 AC9 SER C 20 ? ASP C 35 ? SER A 34 ASP A 49 1 ? 16 HELX_P HELX_P28 AD1 THR C 37 ? CYS C 49 ? THR A 51 CYS A 63 1 ? 13 HELX_P HELX_P29 AD2 SER C 50 ? GLY C 72 ? SER A 64 GLY A 86 1 ? 23 HELX_P HELX_P30 AD3 ASN C 77 ? GLY C 81 ? ASN A 91 GLY A 95 5 ? 5 HELX_P HELX_P31 AD4 PRO C 82 ? ASN C 89 ? PRO A 96 ASN A 103 1 ? 8 HELX_P HELX_P32 AD5 GLN C 92 ? PHE C 107 ? GLN A 106 PHE A 121 1 ? 16 HELX_P HELX_P33 AD6 ALA C 108 ? SER C 113 ? ALA A 122 SER A 127 1 ? 6 HELX_P HELX_P34 AD7 PRO C 117 ? ILE C 122 ? PRO A 131 ILE A 136 5 ? 6 HELX_P HELX_P35 AD8 PRO C 129 ? LEU C 145 ? PRO A 143 LEU A 159 1 ? 17 HELX_P HELX_P36 AD9 PRO C 150 ? ASN C 162 ? PRO A 164 ASN A 176 1 ? 13 HELX_P HELX_P37 AE1 GLU C 166 ? ARG C 174 ? GLU A 180 ARG A 188 1 ? 9 HELX_P HELX_P38 AE2 PRO C 180 ? CYS C 188 ? PRO A 194 CYS A 202 1 ? 9 HELX_P HELX_P39 AE3 GLN C 189 ? TRP C 191 ? GLN A 203 TRP A 205 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_entry_details.entry_id 9N0W _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 PRO _pdbx_validate_close_contact.auth_seq_id_1 50 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 NE2 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 GLN _pdbx_validate_close_contact.auth_seq_id_2 114 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO B 96 ? ? -69.54 -176.54 2 1 ALA C 94 ? ? -98.89 33.53 3 1 ASP A 130 ? ? 51.98 72.85 4 1 PRO A 194 ? ? -59.21 172.98 # _pdbx_point_symmetry.entry_id 9N0W _pdbx_point_symmetry.Schoenflies_symbol C _pdbx_point_symmetry.circular_symmetry 6 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9N0W _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9N0W _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.44 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 140020 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details '100 mM NaCl, 10 mM Tris-HCL, 1 mM EDTA' _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type VIRUS _em_entity_assembly.name HTLV-1 _em_entity_assembly.details 'HTLV-1 virus-like particles produced by transfecting 293T cells with HTLV-1 Gag and Envelope.' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_image_scans.entry_id 9N0W _em_image_scans.id 1 _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.scanner_model ? _em_image_scans.sampling_size ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? _em_image_scans.dimension_height ? _em_image_scans.dimension_width ? _em_image_scans.frames_per_image 40 _em_image_scans.image_recording_id 1 _em_image_scans.used_frames_per_image 1-40 # _em_imaging.entry_id 9N0W _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 750 _em_imaging.nominal_defocus_max 1500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter 100 _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type 'Quantifoil R2/1' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.virus_type 'VIRUS-LIKE PARTICLE' _em_virus_entity.virus_isolate STRAIN _em_virus_entity.entity_assembly_id 1 _em_virus_entity.enveloped YES _em_virus_entity.empty NO _em_virus_entity.details ? # _em_vitrification.entry_id 9N0W _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument 'LEICA EM GP' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details 'Leica GP2 Grid Plunger' # _em_experiment.entry_id 9N0W _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9N0W _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_admin.current_status REL _em_admin.deposition_date 2025-01-24 _em_admin.deposition_site RCSB _em_admin.entry_id 9N0W _em_admin.last_update 2025-12-24 _em_admin.map_release_date 2025-12-24 _em_admin.title 'HTLV-1 Gag capsid from immature particles' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 11908 _em_entity_assembly_naturalsource.organism 'Human T-cell leukemia virus type I' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain B1033-2009 _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell 293T _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode SUPER-RESOLUTION _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 2502 # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.energyfilter_name ? _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 2138437 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? Topaz ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? CTFFIND 4.1.14 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? 'UCSF Chimera' ? 'MODEL FITTING' ? 8 ? 1 ? ISOLDE ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? RELION 4.0.1_cu11.6 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? RELION 5.0b-3_cu11.8 CLASSIFICATION ? 12 1 ? ? RELION 5.0b-3_cu11.8 RECONSTRUCTION ? 13 1 ? ? RELION 5.0b-3_cu11.8 'MODEL REFINEMENT' ? 14 ? 1 ? PHENIX 1.20.1_4487 # _em_specimen.concentration ? _em_specimen.details 'The virus particles were purified from the cell culture supernatant via optiprep gradient ultracentrifugation.' _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.id 1 _em_virus_natural_host.ncbi_tax_id 9606 _em_virus_natural_host.organism 'Homo sapiens' _em_virus_natural_host.strain ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' R01GM151775 1 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' R21DE032878 2 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' F31AI184673 3 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' T32AI083196 4 # _atom_sites.entry_id 9N0W _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #