HEADER METAL BINDING PROTEIN 29-JAN-25 9N34 TITLE GLUTARATE L-2-HYDROXYLASE N187C MUTANT-5'-MAL-C6-TTTT DNA CONJUGATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTARATE 2-HYDROXYLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: G-2-H; COMPND 5 EC: 1.14.11.64; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: GLAH, ECOLC_1047; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXYGENASE, HYDROXYLASE, METAL BINDING, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Z.HAN,C.A.MIRKIN REVDAT 1 04-FEB-26 9N34 0 JRNL AUTH Z.HAN,C.A.MIRKIN JRNL TITL DNA-DIRECTED ASSEMBLY OF DIFFRACTION-QUALITY PROTEIN JRNL TITL 2 CRYSTALS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 (REFMACAT 0.4.88) REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 126.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 22976 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.648 REMARK 3 FREE R VALUE TEST SET COUNT : 1068 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.86 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.93 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1606 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.3420 REMARK 3 BIN FREE R VALUE SET COUNT : 100 REMARK 3 BIN FREE R VALUE : 0.3650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4626 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 26 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.98200 REMARK 3 B22 (A**2) : 0.98200 REMARK 3 B33 (A**2) : -1.96500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.752 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.342 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4755 ; 0.009 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6446 ; 1.328 ; 1.833 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 565 ; 5.706 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 37 ;15.449 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 801 ;13.507 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 698 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3676 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2002 ; 0.215 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3250 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 122 ; 0.155 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2275 ; 8.334 ; 5.645 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2835 ;10.554 ;10.196 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2480 ;11.042 ; 6.288 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3611 ;13.984 ;11.298 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE NOT BEEN USED REMARK 4 REMARK 4 9N34 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-25. REMARK 100 THE DEPOSITION ID IS D_1000292394. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-APR-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX IV REMARK 200 BEAMLINE : BIOMAX REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976254 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE CDTE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20230630 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23007 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.860 REMARK 200 RESOLUTION RANGE LOW (A) : 126.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 26.30 REMARK 200 R MERGE (I) : 0.39200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 9.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 126.5 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 21.90 REMARK 200 R MERGE FOR SHELL (I) : 0.07300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 35.70 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES MONOHYDRATE PH 6.5, 1.6 M REMARK 280 MAGNESIUM SULFATE HEPTAHYDRATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 62.32800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 62.32800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 62.32800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 62.32800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 62.32800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 62.32800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 62.32800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.32800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 124.65600 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 62.32800 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 -62.32800 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 62.32800 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 62.32800 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ALA A 3 REMARK 465 LEU A 4 REMARK 465 THR A 5 REMARK 465 ALA A 6 REMARK 465 VAL A 7 REMARK 465 HIS A 8 REMARK 465 ASN A 9 REMARK 465 ASN A 10 REMARK 465 ALA A 11 REMARK 465 VAL A 12 REMARK 465 ASP A 13 REMARK 465 SER A 14 REMARK 465 GLY A 15 REMARK 465 VAL A 143 REMARK 465 ASP A 144 REMARK 465 ASN A 145 REMARK 465 SER A 146 REMARK 465 ASP A 147 REMARK 465 SER A 148 REMARK 465 TYR A 149 REMARK 465 LEU A 150 REMARK 465 ARG A 151 REMARK 465 GLN A 152 REMARK 465 SER A 219 REMARK 465 LYS A 220 REMARK 465 ASN A 221 REMARK 465 VAL A 222 REMARK 465 THR A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 465 HIS A 322 REMARK 465 HIS A 323 REMARK 465 HIS A 324 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ALA B 3 REMARK 465 LEU B 4 REMARK 465 THR B 5 REMARK 465 ALA B 6 REMARK 465 VAL B 7 REMARK 465 HIS B 8 REMARK 465 ASN B 9 REMARK 465 ASN B 10 REMARK 465 ALA B 11 REMARK 465 VAL B 12 REMARK 465 ASP B 13 REMARK 465 SER B 14 REMARK 465 GLY B 15 REMARK 465 GLN B 16 REMARK 465 ASP B 17 REMARK 465 LYS B 141 REMARK 465 ASN B 142 REMARK 465 VAL B 143 REMARK 465 ASP B 144 REMARK 465 ASN B 145 REMARK 465 SER B 146 REMARK 465 ASP B 147 REMARK 465 SER B 148 REMARK 465 TYR B 149 REMARK 465 LEU B 150 REMARK 465 ARG B 151 REMARK 465 GLN B 152 REMARK 465 PRO B 153 REMARK 465 HIS B 154 REMARK 465 ARG B 155 REMARK 465 SER B 219 REMARK 465 LYS B 220 REMARK 465 ASN B 221 REMARK 465 VAL B 222 REMARK 465 THR B 318 REMARK 465 HIS B 319 REMARK 465 HIS B 320 REMARK 465 HIS B 321 REMARK 465 HIS B 322 REMARK 465 HIS B 323 REMARK 465 HIS B 324 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 92 -104.80 -117.40 REMARK 500 ASP A 103 18.08 -152.21 REMARK 500 ARG A 296 152.84 -48.00 REMARK 500 GLU B 92 -104.87 -116.89 REMARK 500 ASP B 103 18.06 -151.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 66 0.12 SIDE CHAIN REMARK 500 ARG A 209 0.21 SIDE CHAIN REMARK 500 ARG A 294 0.08 SIDE CHAIN REMARK 500 ARG B 66 0.14 SIDE CHAIN REMARK 500 ARG B 209 0.22 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 510 DISTANCE = 7.37 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 160 NE2 REMARK 620 2 ASP A 162 OD1 84.0 REMARK 620 3 ASP A 162 OD2 125.1 58.2 REMARK 620 4 HIS A 292 NE2 82.0 109.2 76.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 B 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 160 NE2 REMARK 620 2 ASP B 162 OD1 89.3 REMARK 620 3 HIS B 292 NE2 82.4 82.4 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9BWU RELATED DB: PDB REMARK 900 RELATED ID: 9N2U RELATED DB: PDB REMARK 900 RELATED ID: 9N33 RELATED DB: PDB DBREF 9N34 A 1 320 UNP B1IVJ9 GLAH_ECOLC 1 320 DBREF 9N34 B 1 320 UNP B1IVJ9 GLAH_ECOLC 1 320 SEQADV 9N34 THR A 24 UNP B1IVJ9 ILE 24 CONFLICT SEQADV 9N34 CYS A 187 UNP B1IVJ9 ASN 187 ENGINEERED MUTATION SEQADV 9N34 HIS A 321 UNP B1IVJ9 EXPRESSION TAG SEQADV 9N34 HIS A 322 UNP B1IVJ9 EXPRESSION TAG SEQADV 9N34 HIS A 323 UNP B1IVJ9 EXPRESSION TAG SEQADV 9N34 HIS A 324 UNP B1IVJ9 EXPRESSION TAG SEQADV 9N34 THR B 24 UNP B1IVJ9 ILE 24 CONFLICT SEQADV 9N34 CYS B 187 UNP B1IVJ9 ASN 187 ENGINEERED MUTATION SEQADV 9N34 HIS B 321 UNP B1IVJ9 EXPRESSION TAG SEQADV 9N34 HIS B 322 UNP B1IVJ9 EXPRESSION TAG SEQADV 9N34 HIS B 323 UNP B1IVJ9 EXPRESSION TAG SEQADV 9N34 HIS B 324 UNP B1IVJ9 EXPRESSION TAG SEQRES 1 A 324 MET ASN ALA LEU THR ALA VAL HIS ASN ASN ALA VAL ASP SEQRES 2 A 324 SER GLY GLN ASP TYR SER GLY PHE THR LEU THR PRO SER SEQRES 3 A 324 ALA GLN SER PRO ARG LEU LEU GLU LEU THR PHE THR GLU SEQRES 4 A 324 GLN THR THR LYS GLN PHE LEU GLU GLN VAL ALA GLU TRP SEQRES 5 A 324 PRO VAL GLN ALA LEU GLU TYR LYS SER PHE LEU ARG PHE SEQRES 6 A 324 ARG VAL GLY LYS ILE LEU ASP ASP LEU CYS ALA ASN GLN SEQRES 7 A 324 LEU GLN PRO LEU LEU LEU LYS THR LEU LEU ASN ARG ALA SEQRES 8 A 324 GLU GLY ALA LEU LEU ILE ASN ALA VAL GLY ILE ASP ASP SEQRES 9 A 324 VAL ALA GLN ALA ASP GLU MET VAL LYS LEU ALA THR ALA SEQRES 10 A 324 VAL ALA HIS LEU ILE GLY ARG SER ASN PHE ASP ALA MET SEQRES 11 A 324 SER GLY GLN TYR TYR ALA ARG PHE VAL VAL LYS ASN VAL SEQRES 12 A 324 ASP ASN SER ASP SER TYR LEU ARG GLN PRO HIS ARG VAL SEQRES 13 A 324 MET GLU LEU HIS ASN ASP GLY THR TYR VAL GLU GLU ILE SEQRES 14 A 324 THR ASP TYR VAL LEU MET MET LYS ILE ASP GLU GLN ASN SEQRES 15 A 324 MET GLN GLY GLY CYS SER LEU LEU LEU HIS LEU ASP ASP SEQRES 16 A 324 TRP GLU HIS LEU ASP HIS TYR PHE ARG HIS PRO LEU ALA SEQRES 17 A 324 ARG ARG PRO MET ARG PHE ALA ALA PRO PRO SER LYS ASN SEQRES 18 A 324 VAL SER LYS ASP VAL PHE HIS PRO VAL PHE ASP VAL ASP SEQRES 19 A 324 GLN GLN GLY ARG PRO VAL MET ARG TYR ILE ASP GLN PHE SEQRES 20 A 324 VAL GLN PRO LYS ASP PHE GLU GLU GLY VAL TRP LEU SER SEQRES 21 A 324 GLU LEU SER ASP ALA ILE GLU THR SER LYS GLY ILE LEU SEQRES 22 A 324 SER VAL PRO VAL PRO VAL GLY LYS PHE LEU LEU ILE ASN SEQRES 23 A 324 ASN LEU PHE TRP LEU HIS GLY ARG ASP ARG PHE THR PRO SEQRES 24 A 324 HIS PRO ASP LEU ARG ARG GLU LEU MET ARG GLN ARG GLY SEQRES 25 A 324 TYR PHE ALA TYR ALA THR HIS HIS HIS HIS HIS HIS SEQRES 1 B 324 MET ASN ALA LEU THR ALA VAL HIS ASN ASN ALA VAL ASP SEQRES 2 B 324 SER GLY GLN ASP TYR SER GLY PHE THR LEU THR PRO SER SEQRES 3 B 324 ALA GLN SER PRO ARG LEU LEU GLU LEU THR PHE THR GLU SEQRES 4 B 324 GLN THR THR LYS GLN PHE LEU GLU GLN VAL ALA GLU TRP SEQRES 5 B 324 PRO VAL GLN ALA LEU GLU TYR LYS SER PHE LEU ARG PHE SEQRES 6 B 324 ARG VAL GLY LYS ILE LEU ASP ASP LEU CYS ALA ASN GLN SEQRES 7 B 324 LEU GLN PRO LEU LEU LEU LYS THR LEU LEU ASN ARG ALA SEQRES 8 B 324 GLU GLY ALA LEU LEU ILE ASN ALA VAL GLY ILE ASP ASP SEQRES 9 B 324 VAL ALA GLN ALA ASP GLU MET VAL LYS LEU ALA THR ALA SEQRES 10 B 324 VAL ALA HIS LEU ILE GLY ARG SER ASN PHE ASP ALA MET SEQRES 11 B 324 SER GLY GLN TYR TYR ALA ARG PHE VAL VAL LYS ASN VAL SEQRES 12 B 324 ASP ASN SER ASP SER TYR LEU ARG GLN PRO HIS ARG VAL SEQRES 13 B 324 MET GLU LEU HIS ASN ASP GLY THR TYR VAL GLU GLU ILE SEQRES 14 B 324 THR ASP TYR VAL LEU MET MET LYS ILE ASP GLU GLN ASN SEQRES 15 B 324 MET GLN GLY GLY CYS SER LEU LEU LEU HIS LEU ASP ASP SEQRES 16 B 324 TRP GLU HIS LEU ASP HIS TYR PHE ARG HIS PRO LEU ALA SEQRES 17 B 324 ARG ARG PRO MET ARG PHE ALA ALA PRO PRO SER LYS ASN SEQRES 18 B 324 VAL SER LYS ASP VAL PHE HIS PRO VAL PHE ASP VAL ASP SEQRES 19 B 324 GLN GLN GLY ARG PRO VAL MET ARG TYR ILE ASP GLN PHE SEQRES 20 B 324 VAL GLN PRO LYS ASP PHE GLU GLU GLY VAL TRP LEU SER SEQRES 21 B 324 GLU LEU SER ASP ALA ILE GLU THR SER LYS GLY ILE LEU SEQRES 22 B 324 SER VAL PRO VAL PRO VAL GLY LYS PHE LEU LEU ILE ASN SEQRES 23 B 324 ASN LEU PHE TRP LEU HIS GLY ARG ASP ARG PHE THR PRO SEQRES 24 B 324 HIS PRO ASP LEU ARG ARG GLU LEU MET ARG GLN ARG GLY SEQRES 25 B 324 TYR PHE ALA TYR ALA THR HIS HIS HIS HIS HIS HIS HET FE2 A 401 1 HET FE2 B 401 1 HETNAM FE2 FE (II) ION FORMUL 3 FE2 2(FE 2+) FORMUL 5 HOH *26(H2 O) HELIX 1 AA1 THR A 38 VAL A 49 1 12 HELIX 2 AA2 PRO A 53 LYS A 60 1 8 HELIX 3 AA3 SER A 61 CYS A 75 1 15 HELIX 4 AA4 GLN A 78 ASN A 89 1 12 HELIX 5 AA5 ASP A 104 ALA A 106 5 3 HELIX 6 AA6 GLN A 107 ILE A 122 1 16 HELIX 7 AA7 ASP A 194 TRP A 196 5 3 HELIX 8 AA8 HIS A 198 ARG A 204 1 7 HELIX 9 AA9 HIS A 205 ARG A 209 5 5 HELIX 10 AB1 ASP A 252 THR A 268 1 17 HELIX 11 AB2 THR B 38 VAL B 49 1 12 HELIX 12 AB3 PRO B 53 LYS B 60 1 8 HELIX 13 AB4 SER B 61 CYS B 75 1 15 HELIX 14 AB5 GLN B 78 ASN B 89 1 12 HELIX 15 AB6 ASP B 104 ALA B 106 5 3 HELIX 16 AB7 GLN B 107 ILE B 122 1 16 HELIX 17 AB8 ASP B 194 TRP B 196 5 3 HELIX 18 AB9 HIS B 198 ARG B 204 1 7 HELIX 19 AC1 HIS B 205 ARG B 209 5 5 HELIX 20 AC2 ASP B 252 THR B 268 1 17 SHEET 1 AA1 7 PHE A 21 PRO A 25 0 SHEET 2 AA1 7 LEU A 32 PHE A 37 -1 O GLU A 34 N THR A 24 SHEET 3 AA1 7 ALA A 94 ALA A 99 1 O LEU A 96 N LEU A 33 SHEET 4 AA1 7 PHE A 282 ASN A 286 -1 O PHE A 282 N ILE A 97 SHEET 5 AA1 7 TYR A 172 GLN A 181 -1 N VAL A 173 O ILE A 285 SHEET 6 AA1 7 ARG A 304 PHE A 314 -1 O MET A 308 N MET A 176 SHEET 7 AA1 7 GLY A 123 SER A 125 -1 N ARG A 124 O TYR A 313 SHEET 1 AA2 7 PHE A 21 PRO A 25 0 SHEET 2 AA2 7 LEU A 32 PHE A 37 -1 O GLU A 34 N THR A 24 SHEET 3 AA2 7 ALA A 94 ALA A 99 1 O LEU A 96 N LEU A 33 SHEET 4 AA2 7 PHE A 282 ASN A 286 -1 O PHE A 282 N ILE A 97 SHEET 5 AA2 7 TYR A 172 GLN A 181 -1 N VAL A 173 O ILE A 285 SHEET 6 AA2 7 ARG A 304 PHE A 314 -1 O MET A 308 N MET A 176 SHEET 7 AA2 7 ALA A 136 VAL A 140 -1 N PHE A 138 O LEU A 307 SHEET 1 AA3 4 MET A 157 HIS A 160 0 SHEET 2 AA3 4 TRP A 290 ARG A 294 -1 O ARG A 294 N MET A 157 SHEET 3 AA3 4 SER A 188 HIS A 192 -1 N LEU A 191 O LEU A 291 SHEET 4 AA3 4 LEU A 273 VAL A 275 -1 O LEU A 273 N LEU A 190 SHEET 1 AA4 3 VAL A 226 HIS A 228 0 SHEET 2 AA4 3 MET A 212 PHE A 214 -1 N PHE A 214 O VAL A 226 SHEET 3 AA4 3 VAL A 248 GLN A 249 -1 O GLN A 249 N ARG A 213 SHEET 1 AA5 2 PHE A 231 VAL A 233 0 SHEET 2 AA5 2 PRO A 239 MET A 241 -1 O VAL A 240 N ASP A 232 SHEET 1 AA6 7 PHE B 21 PRO B 25 0 SHEET 2 AA6 7 LEU B 32 PHE B 37 -1 O GLU B 34 N THR B 24 SHEET 3 AA6 7 ALA B 94 ALA B 99 1 O LEU B 96 N LEU B 33 SHEET 4 AA6 7 PHE B 282 ASN B 286 -1 O PHE B 282 N ILE B 97 SHEET 5 AA6 7 TYR B 172 GLN B 181 -1 N VAL B 173 O ILE B 285 SHEET 6 AA6 7 ARG B 304 PHE B 314 -1 O MET B 308 N MET B 176 SHEET 7 AA6 7 GLY B 123 SER B 125 -1 N ARG B 124 O TYR B 313 SHEET 1 AA7 7 PHE B 21 PRO B 25 0 SHEET 2 AA7 7 LEU B 32 PHE B 37 -1 O GLU B 34 N THR B 24 SHEET 3 AA7 7 ALA B 94 ALA B 99 1 O LEU B 96 N LEU B 33 SHEET 4 AA7 7 PHE B 282 ASN B 286 -1 O PHE B 282 N ILE B 97 SHEET 5 AA7 7 TYR B 172 GLN B 181 -1 N VAL B 173 O ILE B 285 SHEET 6 AA7 7 ARG B 304 PHE B 314 -1 O MET B 308 N MET B 176 SHEET 7 AA7 7 ALA B 136 VAL B 140 -1 N PHE B 138 O LEU B 307 SHEET 1 AA8 4 MET B 157 HIS B 160 0 SHEET 2 AA8 4 TRP B 290 ARG B 294 -1 O ARG B 294 N MET B 157 SHEET 3 AA8 4 SER B 188 HIS B 192 -1 N LEU B 191 O LEU B 291 SHEET 4 AA8 4 LEU B 273 VAL B 275 -1 O LEU B 273 N LEU B 190 SHEET 1 AA9 3 VAL B 226 HIS B 228 0 SHEET 2 AA9 3 MET B 212 PHE B 214 -1 N PHE B 214 O VAL B 226 SHEET 3 AA9 3 VAL B 248 GLN B 249 -1 O GLN B 249 N ARG B 213 SHEET 1 AB1 2 PHE B 231 VAL B 233 0 SHEET 2 AB1 2 PRO B 239 MET B 241 -1 O VAL B 240 N ASP B 232 LINK NE2 HIS A 160 FE FE2 A 401 1555 1555 2.02 LINK OD1 ASP A 162 FE FE2 A 401 1555 1555 2.45 LINK OD2 ASP A 162 FE FE2 A 401 1555 1555 2.01 LINK NE2 HIS A 292 FE FE2 A 401 1555 1555 2.15 LINK NE2 HIS B 160 FE FE2 B 401 1555 1555 2.00 LINK OD1 ASP B 162 FE FE2 B 401 1555 1555 1.98 LINK NE2 HIS B 292 FE FE2 B 401 1555 1555 2.15 CRYST1 124.656 124.656 126.553 90.00 90.00 90.00 P 4 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008022 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008022 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007902 0.00000 CONECT 1071 4635 CONECT 1086 4635 CONECT 1087 4635 CONECT 2125 4635 CONECT 3354 4636 CONECT 3369 4636 CONECT 4414 4636 CONECT 4635 1071 1086 1087 2125 CONECT 4636 3354 3369 4414 MASTER 425 0 2 20 46 0 0 6 4654 2 9 50 END