HEADER VIRUS LIKE PARTICLE 01-FEB-25 9N40 TITLE MS2-PMS2 ICOSAHEDRAL RECONSTRUCTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: CP,COAT PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA PHAGE MS2; SOURCE 3 ORGANISM_TAXID: 12022; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS MS2, VIRUS, VIRUS LIKE PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR S.SUBRAMANIAN,N.MAKASARASHVILI,R.F.GARMANN,K.N.PARENT REVDAT 2 27-AUG-25 9N40 1 JRNL REVDAT 1 06-AUG-25 9N40 0 JRNL AUTH A.RASTANDEH,N.MAKASARASHVILI,H.K.DHALIWAL,S.BAKER, JRNL AUTH 2 S.SUBRAMANIAN,D.A.VILLARREAL,E.I.GAMEZ,K.N.PARENT, JRNL AUTH 3 R.F.GARMANN JRNL TITL MEASURING THE SELECTIVE PACKAGING OF RNA MOLECULES BY VIRAL JRNL TITL 2 COAT PROTEINS IN CELLS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 122 90122 2025 JRNL REFN ESSN 1091-6490 JRNL PMID 40789029 JRNL DOI 10.1073/PNAS.2505190122 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.400 REMARK 3 NUMBER OF PARTICLES : 728471 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9N40 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-25. REMARK 100 THE DEPOSITION ID IS D_1000292274. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ESCHERICHIA PHAGE MS2 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5018.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 180-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 180-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 -0.842571 -0.489659 0.224295 -0.04490 REMARK 350 BIOMT2 1 -0.535234 0.807648 -0.247445 0.42638 REMARK 350 BIOMT3 1 -0.059988 -0.328540 -0.942583 -0.13775 REMARK 350 BIOMT1 2 -0.023626 0.995795 -0.088514 -0.04490 REMARK 350 BIOMT2 2 0.695075 -0.047275 -0.717381 0.42638 REMARK 350 BIOMT3 2 -0.718549 -0.078472 -0.691035 -0.13775 REMARK 350 BIOMT1 3 0.768659 -0.506136 -0.391140 -0.04490 REMARK 350 BIOMT2 3 -0.611727 -0.760373 -0.218227 0.42638 REMARK 350 BIOMT3 3 -0.186959 0.407013 -0.894084 -0.13775 REMARK 350 BIOMT1 4 0.451432 0.247921 -0.857173 -0.04490 REMARK 350 BIOMT2 4 0.317007 -0.942520 -0.105654 0.42638 REMARK 350 BIOMT3 4 -0.834096 -0.224034 -0.504076 -0.13775 REMARK 350 BIOMT1 5 -0.367514 -0.754057 -0.544363 -0.04490 REMARK 350 BIOMT2 5 -0.913302 0.182147 0.364283 0.42638 REMARK 350 BIOMT3 5 -0.175536 0.631047 -0.755624 -0.13775 REMARK 350 BIOMT1 6 -0.768659 0.506136 -0.391140 -0.04490 REMARK 350 BIOMT2 6 0.611727 0.760373 -0.218227 0.42638 REMARK 350 BIOMT3 6 0.186959 -0.407013 -0.894084 -0.13775 REMARK 350 BIOMT1 7 -0.754057 -0.544363 -0.367514 -0.04490 REMARK 350 BIOMT2 7 0.182147 0.364283 -0.913302 0.42638 REMARK 350 BIOMT3 7 0.631047 -0.755624 -0.175536 -0.13775 REMARK 350 BIOMT1 8 -0.391140 0.768659 -0.506136 -0.04490 REMARK 350 BIOMT2 8 -0.218227 -0.611727 -0.760373 0.42638 REMARK 350 BIOMT3 8 -0.894084 -0.186959 0.407013 -0.13775 REMARK 350 BIOMT1 9 0.489659 -0.224295 -0.842571 -0.04490 REMARK 350 BIOMT2 9 -0.807648 0.247445 -0.535234 0.42638 REMARK 350 BIOMT3 9 0.328540 0.942583 -0.059988 -0.13775 REMARK 350 BIOMT1 10 -0.088514 0.023626 -0.995795 -0.04490 REMARK 350 BIOMT2 10 -0.717381 -0.695075 0.047275 0.42638 REMARK 350 BIOMT3 10 -0.691035 0.718549 0.078472 -0.13775 REMARK 350 BIOMT1 11 -0.451432 -0.247921 -0.857173 -0.04490 REMARK 350 BIOMT2 11 -0.317007 0.942520 -0.105654 0.42638 REMARK 350 BIOMT3 11 0.834096 0.224034 -0.504076 -0.13775 REMARK 350 BIOMT1 12 -0.489659 0.224295 -0.842571 -0.04490 REMARK 350 BIOMT2 12 0.807648 -0.247445 -0.535234 0.42638 REMARK 350 BIOMT3 12 -0.328540 -0.942583 -0.059988 -0.13775 REMARK 350 BIOMT1 13 -0.247921 -0.857173 -0.451432 -0.04490 REMARK 350 BIOMT2 13 0.942520 -0.105654 -0.317007 0.42638 REMARK 350 BIOMT3 13 0.224034 -0.504076 0.834096 -0.13775 REMARK 350 BIOMT1 14 -0.842571 0.489659 -0.224295 -0.04490 REMARK 350 BIOMT2 14 -0.535234 -0.807648 0.247445 0.42638 REMARK 350 BIOMT3 14 -0.059988 0.328540 0.942583 -0.13775 REMARK 350 BIOMT1 15 0.544363 0.367514 -0.754057 -0.04490 REMARK 350 BIOMT2 15 -0.364283 0.913302 0.182147 0.42638 REMARK 350 BIOMT3 15 0.755624 0.175536 0.631047 -0.13775 REMARK 350 BIOMT1 16 -0.506136 0.391140 -0.768659 -0.04490 REMARK 350 BIOMT2 16 -0.760373 0.218227 0.611727 0.42638 REMARK 350 BIOMT3 16 0.407013 0.894084 0.186959 -0.13775 REMARK 350 BIOMT1 17 0.088514 -0.023626 -0.995795 -0.04490 REMARK 350 BIOMT2 17 0.717381 0.695075 0.047275 0.42638 REMARK 350 BIOMT3 17 0.691035 -0.718549 0.078472 -0.13775 REMARK 350 BIOMT1 18 -0.544363 -0.367514 -0.754057 -0.04490 REMARK 350 BIOMT2 18 0.364283 -0.913302 0.182147 0.42638 REMARK 350 BIOMT3 18 -0.755624 -0.175536 0.631047 -0.13775 REMARK 350 BIOMT1 19 -0.023626 -0.995795 0.088514 -0.04490 REMARK 350 BIOMT2 19 0.695075 0.047275 0.717381 0.42638 REMARK 350 BIOMT3 19 -0.718549 0.078472 0.691035 -0.13775 REMARK 350 BIOMT1 20 -0.754057 0.544363 0.367514 -0.04490 REMARK 350 BIOMT2 20 0.182147 -0.364283 0.913302 0.42638 REMARK 350 BIOMT3 20 0.631047 0.755624 0.175536 -0.13775 REMARK 350 BIOMT1 21 0.857173 0.451432 -0.247921 -0.04490 REMARK 350 BIOMT2 21 0.105654 0.317007 0.942520 0.42638 REMARK 350 BIOMT3 21 0.504076 -0.834096 0.224034 -0.13775 REMARK 350 BIOMT1 22 -0.224295 0.842571 -0.489659 -0.04490 REMARK 350 BIOMT2 22 0.247445 0.535234 0.807648 0.42638 REMARK 350 BIOMT3 22 0.942583 0.059988 -0.328540 -0.13775 REMARK 350 BIOMT1 23 0.506136 -0.391140 -0.768659 -0.04490 REMARK 350 BIOMT2 23 0.760373 -0.218227 0.611727 0.42638 REMARK 350 BIOMT3 23 -0.407013 -0.894084 0.186959 -0.13775 REMARK 350 BIOMT1 24 -0.857173 -0.451432 -0.247921 -0.04490 REMARK 350 BIOMT2 24 -0.105654 -0.317007 0.942520 0.42638 REMARK 350 BIOMT3 24 -0.504076 0.834096 0.224034 -0.13775 REMARK 350 BIOMT1 25 -0.391140 -0.768659 0.506136 -0.04490 REMARK 350 BIOMT2 25 -0.218227 0.611727 0.760373 0.42638 REMARK 350 BIOMT3 25 -0.894084 0.186959 -0.407013 -0.13775 REMARK 350 BIOMT1 26 -0.247921 0.857173 0.451432 -0.04490 REMARK 350 BIOMT2 26 0.942520 0.105654 0.317007 0.42638 REMARK 350 BIOMT3 26 0.224034 0.504076 -0.834096 -0.13775 REMARK 350 BIOMT1 27 0.995795 -0.088514 -0.023626 -0.04490 REMARK 350 BIOMT2 27 -0.047275 -0.717381 0.695075 0.42638 REMARK 350 BIOMT3 27 -0.078472 -0.691035 -0.718549 -0.13775 REMARK 350 BIOMT1 28 0.367514 0.754057 -0.544363 -0.04490 REMARK 350 BIOMT2 28 0.913302 -0.182147 0.364283 0.42638 REMARK 350 BIOMT3 28 0.175536 -0.631047 -0.755624 -0.13775 REMARK 350 BIOMT1 29 0.224295 -0.842571 -0.489659 -0.04490 REMARK 350 BIOMT2 29 -0.247445 -0.535234 0.807648 0.42638 REMARK 350 BIOMT3 29 -0.942583 -0.059988 -0.328540 -0.13775 REMARK 350 BIOMT1 30 -0.995795 0.088514 -0.023626 -0.04490 REMARK 350 BIOMT2 30 0.047275 0.717381 0.695075 0.42638 REMARK 350 BIOMT3 30 0.078472 0.691035 -0.718549 -0.13775 REMARK 350 BIOMT1 31 0.754057 0.544363 -0.367514 -0.04490 REMARK 350 BIOMT2 31 -0.182147 -0.364283 -0.913302 0.42638 REMARK 350 BIOMT3 31 -0.631047 0.755624 -0.175536 -0.13775 REMARK 350 BIOMT1 32 0.023626 -0.995795 -0.088514 -0.04490 REMARK 350 BIOMT2 32 -0.695075 0.047275 -0.717381 0.42638 REMARK 350 BIOMT3 32 0.718549 0.078472 -0.691035 -0.13775 REMARK 350 BIOMT1 33 -0.857173 0.451432 0.247921 -0.04490 REMARK 350 BIOMT2 33 -0.105654 0.317007 -0.942520 0.42638 REMARK 350 BIOMT3 33 -0.504076 -0.834096 -0.224034 -0.13775 REMARK 350 BIOMT1 34 -0.506136 -0.391140 0.768659 -0.04490 REMARK 350 BIOMT2 34 -0.760373 -0.218227 -0.611727 0.42638 REMARK 350 BIOMT3 34 0.407013 -0.894084 -0.186959 -0.13775 REMARK 350 BIOMT1 35 0.224295 0.842571 0.489659 -0.04490 REMARK 350 BIOMT2 35 -0.247445 0.535234 -0.807648 0.42638 REMARK 350 BIOMT3 35 -0.942583 0.059988 0.328540 -0.13775 REMARK 350 BIOMT1 36 0.857173 -0.451432 0.247921 -0.04490 REMARK 350 BIOMT2 36 0.105654 -0.317007 -0.942520 0.42638 REMARK 350 BIOMT3 36 0.504076 0.834096 -0.224034 -0.13775 REMARK 350 BIOMT1 37 0.842571 0.489659 0.224295 -0.04490 REMARK 350 BIOMT2 37 0.535234 -0.807648 -0.247445 0.42638 REMARK 350 BIOMT3 37 0.059988 0.328540 -0.942583 -0.13775 REMARK 350 BIOMT1 38 0.247921 -0.857173 0.451432 -0.04490 REMARK 350 BIOMT2 38 -0.942520 -0.105654 0.317007 0.42638 REMARK 350 BIOMT3 38 -0.224034 -0.504076 -0.834096 -0.13775 REMARK 350 BIOMT1 39 -0.544363 0.367514 0.754057 -0.04490 REMARK 350 BIOMT2 39 0.364283 0.913302 -0.182147 0.42638 REMARK 350 BIOMT3 39 -0.755624 0.175536 -0.631047 -0.13775 REMARK 350 BIOMT1 40 -0.088514 -0.023626 0.995795 -0.04490 REMARK 350 BIOMT2 40 -0.717381 0.695075 -0.047275 0.42638 REMARK 350 BIOMT3 40 -0.691035 -0.718549 -0.078472 -0.13775 REMARK 350 BIOMT1 41 0.506136 0.391140 0.768659 -0.04490 REMARK 350 BIOMT2 41 0.760373 0.218227 -0.611727 0.42638 REMARK 350 BIOMT3 41 -0.407013 0.894084 -0.186959 -0.13775 REMARK 350 BIOMT1 42 0.544363 -0.367514 0.754057 -0.04490 REMARK 350 BIOMT2 42 -0.364283 -0.913302 -0.182147 0.42638 REMARK 350 BIOMT3 42 0.755624 -0.175536 -0.631047 -0.13775 REMARK 350 BIOMT1 43 0.391140 0.768659 0.506136 -0.04490 REMARK 350 BIOMT2 43 0.218227 -0.611727 0.760373 0.42638 REMARK 350 BIOMT3 43 0.894084 -0.186959 -0.407013 -0.13775 REMARK 350 BIOMT1 44 0.754057 -0.544363 0.367514 -0.04490 REMARK 350 BIOMT2 44 -0.182147 0.364283 0.913302 0.42638 REMARK 350 BIOMT3 44 -0.631047 -0.755624 0.175536 -0.13775 REMARK 350 BIOMT1 45 -0.489659 -0.224295 0.842571 -0.04490 REMARK 350 BIOMT2 45 0.807648 0.247445 0.535234 0.42638 REMARK 350 BIOMT3 45 -0.328540 0.942583 0.059988 -0.13775 REMARK 350 BIOMT1 46 0.451432 -0.247921 0.857173 -0.04490 REMARK 350 BIOMT2 46 0.317007 0.942520 0.105654 0.42638 REMARK 350 BIOMT3 46 -0.834096 0.224034 0.504076 -0.13775 REMARK 350 BIOMT1 47 0.088514 0.023626 0.995795 -0.04490 REMARK 350 BIOMT2 47 0.717381 -0.695075 -0.047275 0.42638 REMARK 350 BIOMT3 47 0.691035 0.718549 -0.078472 -0.13775 REMARK 350 BIOMT1 48 0.489659 0.224295 0.842571 -0.04490 REMARK 350 BIOMT2 48 -0.807648 -0.247445 0.535234 0.42638 REMARK 350 BIOMT3 48 0.328540 -0.942583 0.059988 -0.13775 REMARK 350 BIOMT1 49 0.023626 0.995795 0.088514 -0.04490 REMARK 350 BIOMT2 49 -0.695075 -0.047275 0.717381 0.42638 REMARK 350 BIOMT3 49 0.718549 -0.078472 0.691035 -0.13775 REMARK 350 BIOMT1 50 0.842571 -0.489659 -0.224295 -0.04490 REMARK 350 BIOMT2 50 0.535234 0.807648 0.247445 0.42638 REMARK 350 BIOMT3 50 0.059988 -0.328540 0.942583 -0.13775 REMARK 350 BIOMT1 51 -0.768659 -0.506136 0.391140 -0.04490 REMARK 350 BIOMT2 51 0.611727 -0.760373 0.218227 0.42638 REMARK 350 BIOMT3 51 0.186959 0.407013 0.894084 -0.13775 REMARK 350 BIOMT1 52 0.367514 -0.754057 0.544363 -0.04490 REMARK 350 BIOMT2 52 0.913302 0.182147 -0.364283 0.42638 REMARK 350 BIOMT3 52 0.175536 0.631047 0.755624 -0.13775 REMARK 350 BIOMT1 53 -0.451432 0.247921 0.857173 -0.04490 REMARK 350 BIOMT2 53 -0.317007 -0.942520 0.105654 0.42638 REMARK 350 BIOMT3 53 0.834096 -0.224034 0.504076 -0.13775 REMARK 350 BIOMT1 54 0.768659 0.506136 0.391140 -0.04490 REMARK 350 BIOMT2 54 -0.611727 0.760373 0.218227 0.42638 REMARK 350 BIOMT3 54 -0.186959 -0.407013 0.894084 -0.13775 REMARK 350 BIOMT1 55 0.247921 0.857173 -0.451432 -0.04490 REMARK 350 BIOMT2 55 -0.942520 0.105654 -0.317007 0.42638 REMARK 350 BIOMT3 55 -0.224034 0.504076 0.834096 -0.13775 REMARK 350 BIOMT1 56 0.391140 -0.768659 -0.506136 -0.04490 REMARK 350 BIOMT2 56 0.218227 0.611727 -0.760373 0.42638 REMARK 350 BIOMT3 56 0.894084 0.186959 0.407013 -0.13775 REMARK 350 BIOMT1 57 -0.995795 -0.088514 0.023626 -0.04490 REMARK 350 BIOMT2 57 0.047275 -0.717381 -0.695075 0.42638 REMARK 350 BIOMT3 57 0.078472 -0.691035 0.718549 -0.13775 REMARK 350 BIOMT1 58 -0.224295 -0.842571 0.489659 -0.04490 REMARK 350 BIOMT2 58 0.247445 -0.535234 -0.807648 0.42638 REMARK 350 BIOMT3 58 0.942583 -0.059988 0.328540 -0.13775 REMARK 350 BIOMT1 59 -0.367514 0.754057 0.544363 -0.04490 REMARK 350 BIOMT2 59 -0.913302 -0.182147 -0.364283 0.42638 REMARK 350 BIOMT3 59 -0.175536 -0.631047 0.755624 -0.13775 REMARK 350 BIOMT1 60 0.995795 0.088514 0.023626 -0.04490 REMARK 350 BIOMT2 60 -0.047275 0.717381 -0.695075 0.42638 REMARK 350 BIOMT3 60 -0.078472 0.691035 0.718549 -0.13775 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA B 2 REMARK 465 ALA C 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN C 37 -159.17 64.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-48864 RELATED DB: EMDB REMARK 900 MS2-PMS2 ICOSAHEDRAL RECONSTRUCTION DBREF 9N40 A 2 130 UNP P03612 CAPSD_BPMS2 2 130 DBREF 9N40 B 2 130 UNP P03612 CAPSD_BPMS2 2 130 DBREF 9N40 C 2 130 UNP P03612 CAPSD_BPMS2 2 130 SEQRES 1 A 129 ALA SER ASN PHE THR GLN PHE VAL LEU VAL ASP ASN GLY SEQRES 2 A 129 GLY THR GLY ASP VAL THR VAL ALA PRO SER ASN PHE ALA SEQRES 3 A 129 ASN GLY VAL ALA GLU TRP ILE SER SER ASN SER ARG SER SEQRES 4 A 129 GLN ALA TYR LYS VAL THR CYS SER VAL ARG GLN SER SER SEQRES 5 A 129 ALA GLN ASN ARG LYS TYR THR ILE LYS VAL GLU VAL PRO SEQRES 6 A 129 LYS VAL ALA THR GLN THR VAL GLY GLY VAL GLU LEU PRO SEQRES 7 A 129 VAL ALA ALA TRP ARG SER TYR LEU ASN MET GLU LEU THR SEQRES 8 A 129 ILE PRO ILE PHE ALA THR ASN SER ASP CYS GLU LEU ILE SEQRES 9 A 129 VAL LYS ALA MET GLN GLY LEU LEU LYS ASP GLY ASN PRO SEQRES 10 A 129 ILE PRO SER ALA ILE ALA ALA ASN SER GLY ILE TYR SEQRES 1 B 129 ALA SER ASN PHE THR GLN PHE VAL LEU VAL ASP ASN GLY SEQRES 2 B 129 GLY THR GLY ASP VAL THR VAL ALA PRO SER ASN PHE ALA SEQRES 3 B 129 ASN GLY VAL ALA GLU TRP ILE SER SER ASN SER ARG SER SEQRES 4 B 129 GLN ALA TYR LYS VAL THR CYS SER VAL ARG GLN SER SER SEQRES 5 B 129 ALA GLN ASN ARG LYS TYR THR ILE LYS VAL GLU VAL PRO SEQRES 6 B 129 LYS VAL ALA THR GLN THR VAL GLY GLY VAL GLU LEU PRO SEQRES 7 B 129 VAL ALA ALA TRP ARG SER TYR LEU ASN MET GLU LEU THR SEQRES 8 B 129 ILE PRO ILE PHE ALA THR ASN SER ASP CYS GLU LEU ILE SEQRES 9 B 129 VAL LYS ALA MET GLN GLY LEU LEU LYS ASP GLY ASN PRO SEQRES 10 B 129 ILE PRO SER ALA ILE ALA ALA ASN SER GLY ILE TYR SEQRES 1 C 129 ALA SER ASN PHE THR GLN PHE VAL LEU VAL ASP ASN GLY SEQRES 2 C 129 GLY THR GLY ASP VAL THR VAL ALA PRO SER ASN PHE ALA SEQRES 3 C 129 ASN GLY VAL ALA GLU TRP ILE SER SER ASN SER ARG SER SEQRES 4 C 129 GLN ALA TYR LYS VAL THR CYS SER VAL ARG GLN SER SER SEQRES 5 C 129 ALA GLN ASN ARG LYS TYR THR ILE LYS VAL GLU VAL PRO SEQRES 6 C 129 LYS VAL ALA THR GLN THR VAL GLY GLY VAL GLU LEU PRO SEQRES 7 C 129 VAL ALA ALA TRP ARG SER TYR LEU ASN MET GLU LEU THR SEQRES 8 C 129 ILE PRO ILE PHE ALA THR ASN SER ASP CYS GLU LEU ILE SEQRES 9 C 129 VAL LYS ALA MET GLN GLY LEU LEU LYS ASP GLY ASN PRO SEQRES 10 C 129 ILE PRO SER ALA ILE ALA ALA ASN SER GLY ILE TYR HELIX 1 AA1 PHE A 26 VAL A 30 5 5 HELIX 2 AA2 THR A 98 LEU A 113 1 16 HELIX 3 AA3 ASN A 117 ALA A 125 1 9 HELIX 4 AA4 PHE B 26 VAL B 30 5 5 HELIX 5 AA5 PRO B 79 ALA B 82 5 4 HELIX 6 AA6 THR B 98 LEU B 113 1 16 HELIX 7 AA7 ASN B 117 ALA B 125 1 9 HELIX 8 AA8 PHE C 26 VAL C 30 5 5 HELIX 9 AA9 SER C 38 ALA C 42 5 5 HELIX 10 AB1 THR C 98 LEU C 113 1 16 HELIX 11 AB2 ASN C 117 ALA C 125 1 9 SHEET 1 AA1 6 PHE A 8 VAL A 11 0 SHEET 2 AA1 6 VAL A 19 ASN A 25 -1 O VAL A 19 N LEU A 10 SHEET 3 AA1 6 ALA A 31 SER A 35 -1 O ILE A 34 N ALA A 22 SHEET 4 AA1 6 LYS A 44 SER A 53 -1 O VAL A 45 N TRP A 33 SHEET 5 AA1 6 ASN A 56 VAL A 73 -1 O THR A 60 N SER A 48 SHEET 6 AA1 6 VAL A 76 PRO A 94 -1 O LEU A 91 N TYR A 59 SHEET 1 AA2 6 PHE B 8 VAL B 11 0 SHEET 2 AA2 6 VAL B 19 ASN B 25 -1 O VAL B 19 N VAL B 11 SHEET 3 AA2 6 ALA B 31 ILE B 34 -1 O ILE B 34 N ALA B 22 SHEET 4 AA2 6 LYS B 44 ARG B 50 -1 O VAL B 45 N TRP B 33 SHEET 5 AA2 6 ASN B 56 PRO B 66 -1 O LYS B 58 N ARG B 50 SHEET 6 AA2 6 ARG B 84 PRO B 94 -1 O ILE B 93 N ARG B 57 SHEET 1 AA3 6 PHE C 8 VAL C 11 0 SHEET 2 AA3 6 VAL C 19 ASN C 25 -1 O VAL C 19 N LEU C 10 SHEET 3 AA3 6 ALA C 31 SER C 35 -1 O ILE C 34 N ALA C 22 SHEET 4 AA3 6 LYS C 44 ARG C 50 -1 O VAL C 45 N TRP C 33 SHEET 5 AA3 6 ASN C 56 VAL C 73 -1 O THR C 60 N SER C 48 SHEET 6 AA3 6 VAL C 76 PRO C 94 -1 O LEU C 91 N TYR C 59 CISPEP 1 LEU B 78 PRO B 79 0 -1.53 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 966 TYR A 130 TER 1927 TYR B 130 TER 2888 TYR C 130 MASTER 303 0 0 11 18 0 0 6 2885 3 0 30 END