HEADER METAL BINDING PROTEIN 09-FEB-25 9N8S TITLE GLUTARATE L-2-HYDROXYLASE Q184C MUTANT-5'-MAL-C2-AGCT DNA CONJUGATE AT TITLE 2 2.03 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTARATE 2-HYDROXYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: G-2-H; COMPND 5 EC: 1.14.11.64; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: GLAH, ECOLC_1047; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXYGENASE, HYDROXYLASE, METAL BINDING, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Z.HAN,C.A.MIRKIN REVDAT 1 29-JUL-26 9N8S 0 JRNL AUTH Z.HAN,C.A.MIRKIN JRNL TITL DIFFRACTION-QUALITY, ULTRAFLEXIBLE PROTEIN SINGLE CRYSTALS JRNL TITL 2 ENGINEERED WITH DNA JRNL REF SCI ADV 2026 JRNL REFN ESSN 2375-2548 JRNL DOI 10.1126/SCIADV.AEH2948 REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 26934 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1396 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.03 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1950 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.32 REMARK 3 BIN R VALUE (WORKING SET) : 0.3450 REMARK 3 BIN FREE R VALUE SET COUNT : 85 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2374 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 191 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.17000 REMARK 3 B22 (A**2) : -0.17000 REMARK 3 B33 (A**2) : 0.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.171 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.156 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2440 ; 0.008 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2296 ; 0.000 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3306 ; 1.774 ; 1.835 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5264 ; 0.719 ; 1.766 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 288 ; 6.480 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 20 ;20.382 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 412 ;13.645 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 356 ; 0.119 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2900 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 600 ; 0.012 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1161 ; 2.990 ; 2.959 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1161 ; 2.985 ; 2.960 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1446 ; 4.372 ; 5.275 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1447 ; 4.371 ; 5.278 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1279 ; 4.437 ; 3.338 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1275 ; 4.440 ; 3.338 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1855 ; 6.242 ; 5.942 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2697 ; 8.352 ;28.940 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2653 ; 8.317 ;28.490 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 9N8S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-FEB-25. REMARK 100 THE DEPOSITION ID IS D_1000292794. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.920194 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20241002 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28337 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 34.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 26.10 REMARK 200 R MERGE (I) : 0.31400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 20.00 REMARK 200 R MERGE FOR SHELL (I) : 2.83800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M BIS-TRIS PH 7, 1.5 M LITHIUM REMARK 280 SULFATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 48.38450 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 48.38450 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 92.10350 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 48.38450 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 48.38450 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 92.10350 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 48.38450 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 48.38450 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 92.10350 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 48.38450 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 48.38450 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 92.10350 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 48.38450 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 48.38450 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 92.10350 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 48.38450 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 48.38450 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 92.10350 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 48.38450 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 48.38450 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 92.10350 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 48.38450 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 48.38450 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 92.10350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 602 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 614 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 668 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 673 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ALA A 3 REMARK 465 LEU A 4 REMARK 465 THR A 5 REMARK 465 ALA A 6 REMARK 465 VAL A 7 REMARK 465 HIS A 8 REMARK 465 ASN A 9 REMARK 465 ASN A 10 REMARK 465 ALA A 11 REMARK 465 VAL A 12 REMARK 465 ASP A 13 REMARK 465 SER A 14 REMARK 465 VAL A 143 REMARK 465 ASP A 144 REMARK 465 ASN A 145 REMARK 465 SER A 146 REMARK 465 ASP A 147 REMARK 465 SER A 148 REMARK 465 PRO A 218 REMARK 465 SER A 219 REMARK 465 LYS A 220 REMARK 465 ASN A 221 REMARK 465 VAL A 222 REMARK 465 SER A 223 REMARK 465 THR A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 465 HIS A 322 REMARK 465 HIS A 323 REMARK 465 HIS A 324 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 29 139.41 -174.37 REMARK 500 GLU A 92 -96.64 -121.81 REMARK 500 ASP A 103 19.89 -162.78 REMARK 500 ASP A 234 -169.17 -73.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 66 0.24 SIDE CHAIN REMARK 500 ARG A 209 0.26 SIDE CHAIN REMARK 500 ARG A 210 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 691 DISTANCE = 6.56 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 160 NE2 REMARK 620 2 ASP A 162 OD1 96.6 REMARK 620 3 HIS A 292 NE2 93.9 90.8 REMARK 620 4 HOH A 504 O 175.7 87.6 86.7 REMARK 620 5 HOH A 635 O 96.3 166.2 93.3 79.5 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9BWU RELATED DB: PDB REMARK 900 RELATED ID: 9N2U RELATED DB: PDB REMARK 900 RELATED ID: 9N33 RELATED DB: PDB REMARK 900 RELATED ID: 9N34 RELATED DB: PDB REMARK 900 RELATED ID: 9N53 RELATED DB: PDB REMARK 900 RELATED ID: 9N56 RELATED DB: PDB REMARK 900 RELATED ID: 9N57 RELATED DB: PDB REMARK 900 RELATED ID: 9N5S RELATED DB: PDB REMARK 900 RELATED ID: 9N5W RELATED DB: PDB REMARK 900 RELATED ID: 9N60 RELATED DB: PDB REMARK 900 RELATED ID: 9N6S RELATED DB: PDB REMARK 900 RELATED ID: 9N7C RELATED DB: PDB REMARK 900 RELATED ID: 9N7H RELATED DB: PDB REMARK 900 RELATED ID: 9N7I RELATED DB: PDB REMARK 900 RELATED ID: 9N7J RELATED DB: PDB REMARK 900 RELATED ID: 9N7L RELATED DB: PDB REMARK 900 RELATED ID: 9N7N RELATED DB: PDB REMARK 900 RELATED ID: 9N7P RELATED DB: PDB REMARK 900 RELATED ID: 9N7U RELATED DB: PDB REMARK 900 RELATED ID: 9N7X RELATED DB: PDB REMARK 900 RELATED ID: 9N8C RELATED DB: PDB REMARK 900 RELATED ID: 9N8D RELATED DB: PDB REMARK 900 RELATED ID: 9N8K RELATED DB: PDB REMARK 900 RELATED ID: 9N8L RELATED DB: PDB REMARK 900 RELATED ID: 9N8O RELATED DB: PDB DBREF 9N8S A 1 320 UNP B1IVJ9 GLAH_ECOLC 1 320 SEQADV 9N8S THR A 24 UNP B1IVJ9 ILE 24 CONFLICT SEQADV 9N8S CYS A 184 UNP B1IVJ9 GLN 184 ENGINEERED MUTATION SEQADV 9N8S HIS A 321 UNP B1IVJ9 EXPRESSION TAG SEQADV 9N8S HIS A 322 UNP B1IVJ9 EXPRESSION TAG SEQADV 9N8S HIS A 323 UNP B1IVJ9 EXPRESSION TAG SEQADV 9N8S HIS A 324 UNP B1IVJ9 EXPRESSION TAG SEQRES 1 A 324 MET ASN ALA LEU THR ALA VAL HIS ASN ASN ALA VAL ASP SEQRES 2 A 324 SER GLY GLN ASP TYR SER GLY PHE THR LEU THR PRO SER SEQRES 3 A 324 ALA GLN SER PRO ARG LEU LEU GLU LEU THR PHE THR GLU SEQRES 4 A 324 GLN THR THR LYS GLN PHE LEU GLU GLN VAL ALA GLU TRP SEQRES 5 A 324 PRO VAL GLN ALA LEU GLU TYR LYS SER PHE LEU ARG PHE SEQRES 6 A 324 ARG VAL GLY LYS ILE LEU ASP ASP LEU CYS ALA ASN GLN SEQRES 7 A 324 LEU GLN PRO LEU LEU LEU LYS THR LEU LEU ASN ARG ALA SEQRES 8 A 324 GLU GLY ALA LEU LEU ILE ASN ALA VAL GLY ILE ASP ASP SEQRES 9 A 324 VAL ALA GLN ALA ASP GLU MET VAL LYS LEU ALA THR ALA SEQRES 10 A 324 VAL ALA HIS LEU ILE GLY ARG SER ASN PHE ASP ALA MET SEQRES 11 A 324 SER GLY GLN TYR TYR ALA ARG PHE VAL VAL LYS ASN VAL SEQRES 12 A 324 ASP ASN SER ASP SER TYR LEU ARG GLN PRO HIS ARG VAL SEQRES 13 A 324 MET GLU LEU HIS ASN ASP GLY THR TYR VAL GLU GLU ILE SEQRES 14 A 324 THR ASP TYR VAL LEU MET MET LYS ILE ASP GLU GLN ASN SEQRES 15 A 324 MET CYS GLY GLY ASN SER LEU LEU LEU HIS LEU ASP ASP SEQRES 16 A 324 TRP GLU HIS LEU ASP HIS TYR PHE ARG HIS PRO LEU ALA SEQRES 17 A 324 ARG ARG PRO MET ARG PHE ALA ALA PRO PRO SER LYS ASN SEQRES 18 A 324 VAL SER LYS ASP VAL PHE HIS PRO VAL PHE ASP VAL ASP SEQRES 19 A 324 GLN GLN GLY ARG PRO VAL MET ARG TYR ILE ASP GLN PHE SEQRES 20 A 324 VAL GLN PRO LYS ASP PHE GLU GLU GLY VAL TRP LEU SER SEQRES 21 A 324 GLU LEU SER ASP ALA ILE GLU THR SER LYS GLY ILE LEU SEQRES 22 A 324 SER VAL PRO VAL PRO VAL GLY LYS PHE LEU LEU ILE ASN SEQRES 23 A 324 ASN LEU PHE TRP LEU HIS GLY ARG ASP ARG PHE THR PRO SEQRES 24 A 324 HIS PRO ASP LEU ARG ARG GLU LEU MET ARG GLN ARG GLY SEQRES 25 A 324 TYR PHE ALA TYR ALA THR HIS HIS HIS HIS HIS HIS HET FE2 A 401 1 HET SO4 A 402 5 HETNAM FE2 FE (II) ION HETNAM SO4 SULFATE ION FORMUL 2 FE2 FE 2+ FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *191(H2 O) HELIX 1 AA1 THR A 38 ALA A 50 1 13 HELIX 2 AA2 PRO A 53 LYS A 60 1 8 HELIX 3 AA3 SER A 61 LEU A 74 1 14 HELIX 4 AA4 GLN A 78 ASN A 89 1 12 HELIX 5 AA5 ASP A 104 ALA A 106 5 3 HELIX 6 AA6 GLN A 107 ILE A 122 1 16 HELIX 7 AA7 ASP A 194 TRP A 196 5 3 HELIX 8 AA8 HIS A 198 ARG A 204 1 7 HELIX 9 AA9 HIS A 205 ARG A 210 5 6 HELIX 10 AB1 ASP A 252 THR A 268 1 17 SHEET 1 AA1 8 GLN A 16 TYR A 18 0 SHEET 2 AA1 8 PHE A 21 PRO A 25 -1 O LEU A 23 N GLN A 16 SHEET 3 AA1 8 LEU A 32 PHE A 37 -1 O GLU A 34 N THR A 24 SHEET 4 AA1 8 ALA A 94 ALA A 99 1 O LEU A 96 N LEU A 35 SHEET 5 AA1 8 PHE A 282 ASN A 286 -1 O PHE A 282 N ILE A 97 SHEET 6 AA1 8 TYR A 172 GLN A 181 -1 N MET A 175 O LEU A 283 SHEET 7 AA1 8 ARG A 304 PHE A 314 -1 O MET A 308 N MET A 176 SHEET 8 AA1 8 GLY A 123 SER A 125 -1 N ARG A 124 O TYR A 313 SHEET 1 AA2 8 GLN A 16 TYR A 18 0 SHEET 2 AA2 8 PHE A 21 PRO A 25 -1 O LEU A 23 N GLN A 16 SHEET 3 AA2 8 LEU A 32 PHE A 37 -1 O GLU A 34 N THR A 24 SHEET 4 AA2 8 ALA A 94 ALA A 99 1 O LEU A 96 N LEU A 35 SHEET 5 AA2 8 PHE A 282 ASN A 286 -1 O PHE A 282 N ILE A 97 SHEET 6 AA2 8 TYR A 172 GLN A 181 -1 N MET A 175 O LEU A 283 SHEET 7 AA2 8 ARG A 304 PHE A 314 -1 O MET A 308 N MET A 176 SHEET 8 AA2 8 ALA A 136 VAL A 140 -1 N VAL A 140 O ARG A 305 SHEET 1 AA3 4 MET A 157 HIS A 160 0 SHEET 2 AA3 4 TRP A 290 ARG A 294 -1 O ARG A 294 N MET A 157 SHEET 3 AA3 4 SER A 188 HIS A 192 -1 N LEU A 191 O LEU A 291 SHEET 4 AA3 4 LEU A 273 VAL A 275 -1 O LEU A 273 N LEU A 190 SHEET 1 AA4 2 CYS A 184 GLY A 185 0 SHEET 2 AA4 2 PHE A 297 THR A 298 -1 O THR A 298 N CYS A 184 SHEET 1 AA5 3 VAL A 226 HIS A 228 0 SHEET 2 AA5 3 MET A 212 PHE A 214 -1 N PHE A 214 O VAL A 226 SHEET 3 AA5 3 VAL A 248 GLN A 249 -1 O GLN A 249 N ARG A 213 SHEET 1 AA6 2 PHE A 231 VAL A 233 0 SHEET 2 AA6 2 PRO A 239 MET A 241 -1 O VAL A 240 N ASP A 232 LINK NE2 HIS A 160 FE FE2 A 401 1555 1555 2.10 LINK OD1 ASP A 162 FE FE2 A 401 1555 1555 2.04 LINK NE2 HIS A 292 FE FE2 A 401 1555 1555 2.12 LINK FE FE2 A 401 O HOH A 504 1555 1555 2.36 LINK FE FE2 A 401 O HOH A 635 1555 1555 2.45 CRYST1 96.769 96.769 184.207 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010334 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010334 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005429 0.00000 CONECT 1115 2376 CONECT 1130 2376 CONECT 2155 2376 CONECT 2376 1115 1130 2155 2385 CONECT 2376 2516 CONECT 2377 2378 2379 2380 2381 CONECT 2378 2377 CONECT 2379 2377 CONECT 2380 2377 CONECT 2381 2377 CONECT 2385 2376 CONECT 2516 2376 MASTER 447 0 2 10 27 0 0 6 2571 1 12 25 END