HEADER RNA BINDING PROTEIN/RNA/DNA 02-MAR-25 9NL3 TITLE STRUCTURE OF R2 RETROTRANSPOSON PROTEIN FROM TAENIOPYGIA GUTTATA TITLE 2 INITIATING TARGET-PRIMED REVERSE TRANSCRIPTION CAVEAT 9NL3 RESIDUES ARG A 165 AND ARG A 166 THAT ARE NEXT TO EACH OTHER CAVEAT 2 9NL3 IN THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED. COMPND MOL_ID: 1; COMPND 2 MOLECULE: R2 RETROTRANSPOSON PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BOTTOM STRAND FOR TARGET RDNA; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: PRIMER; COMPND 11 CHAIN: P; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: 3'UTR RNA; COMPND 15 CHAIN: R; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 5; COMPND 18 MOLECULE: TOP STRAND FOR TARGET RDNA; COMPND 19 CHAIN: T; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TAENIOPYGIA GUTTATA; SOURCE 3 ORGANISM_COMMON: ZEBRA FINCH; SOURCE 4 ORGANISM_TAXID: 59729; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 MOL_ID: 4; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630; SOURCE 19 MOL_ID: 5; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 22 ORGANISM_TAXID: 32630 KEYWDS RETROTRANSPOSON, REVERSE TRANSCRIPTASE, RNA BINDING PROTEIN-RNA-DNA KEYWDS 2 COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR A.THAWANI,K.COLLINS,E.NOGALES REVDAT 2 02-JUL-25 9NL3 1 JRNL REVDAT 1 18-JUN-25 9NL3 0 JRNL AUTH A.THAWANI,A.RODRIGUEZ-VARGAS,B.VAN TREECK,N.T.HASSAN, JRNL AUTH 2 D.L.ADELSON,E.NOGALES,K.COLLINS JRNL TITL STRUCTURES OF VERTEBRATE R2 RETROTRANSPOSON COMPLEXES DURING JRNL TITL 2 TARGET-PRIMED REVERSE TRANSCRIPTION AND AFTER SECOND-STRAND JRNL TITL 3 NICKING. JRNL REF SCI ADV V. 11 U5533 2025 JRNL REFN ESSN 2375-2548 JRNL PMID 40540573 JRNL DOI 10.1126/SCIADV.ADU5533 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.200 REMARK 3 NUMBER OF PARTICLES : 18892 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9NL3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAR-25. REMARK 100 THE DEPOSITION ID IS D_1000293598. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : R2 RETROTRANSPOSON PROTEIN IN REMARK 245 TPRT INITIATION STAGE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.10 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 5096 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : OTHER REMARK 245 NOMINAL MAGNIFICATION : 81000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, P, R, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 172 REMARK 465 ALA A 173 REMARK 465 GLU A 174 REMARK 465 GLU A 175 REMARK 465 PRO A 176 REMARK 465 ARG A 177 REMARK 465 GLU A 178 REMARK 465 GLU A 179 REMARK 465 PRO A 180 REMARK 465 GLY A 181 REMARK 465 THR A 182 REMARK 465 CYS A 183 REMARK 465 HIS A 184 REMARK 465 HIS A 185 REMARK 465 THR A 186 REMARK 465 ARG A 187 REMARK 465 ARG A 188 REMARK 465 ALA A 189 REMARK 465 ALA A 190 REMARK 465 ALA A 191 REMARK 465 SER A 192 REMARK 465 LEU A 193 REMARK 465 ARG A 194 REMARK 465 THR A 195 REMARK 465 GLU A 196 REMARK 465 PRO A 197 REMARK 465 GLU A 198 REMARK 465 MET A 199 REMARK 465 SER A 200 REMARK 465 HIS A 201 REMARK 465 HIS A 202 REMARK 465 ALA A 203 REMARK 465 GLN A 204 REMARK 465 ALA A 205 REMARK 465 GLU A 206 REMARK 465 ASP A 207 REMARK 465 ARG A 208 REMARK 465 ASP A 209 REMARK 465 ASN A 210 REMARK 465 GLY A 211 REMARK 465 PRO A 212 REMARK 465 GLY A 213 REMARK 465 ARG A 214 REMARK 465 ARG A 215 REMARK 465 PRO A 216 REMARK 465 LEU A 217 REMARK 465 PRO A 218 REMARK 465 GLY A 219 REMARK 465 ARG A 220 REMARK 465 ALA A 221 REMARK 465 ALA A 222 REMARK 465 ALA A 223 REMARK 465 GLY A 224 REMARK 465 GLY A 225 REMARK 465 ARG A 226 REMARK 465 THR A 227 REMARK 465 MET A 228 REMARK 465 ASP A 229 REMARK 465 GLU A 230 REMARK 465 ILE A 231 REMARK 465 ARG A 232 REMARK 465 ARG A 233 REMARK 465 HIS A 234 REMARK 465 PRO A 235 REMARK 465 ASP A 236 REMARK 465 LYS A 237 REMARK 465 GLY A 238 REMARK 465 ASN A 239 REMARK 465 GLY A 240 REMARK 465 GLN A 241 REMARK 465 GLN A 242 REMARK 465 ARG A 243 REMARK 465 PRO A 244 REMARK 465 THR A 245 REMARK 465 LYS A 246 REMARK 465 GLN A 247 REMARK 465 LYS A 248 REMARK 465 SER A 249 REMARK 465 LYS A 315 REMARK 465 ASP A 316 REMARK 465 THR A 317 REMARK 465 VAL A 318 REMARK 465 THR A 319 REMARK 465 ARG A 320 REMARK 465 GLU A 321 REMARK 465 LYS A 322 REMARK 465 HIS A 323 REMARK 465 PRO A 324 REMARK 465 LYS A 325 REMARK 465 LYS A 326 REMARK 465 DT B 1 REMARK 465 DT B 2 REMARK 465 DA B 3 REMARK 465 DG B 4 REMARK 465 DA B 5 REMARK 465 DT B 6 REMARK 465 DG B 7 REMARK 465 DA B 8 REMARK 465 DC B 9 REMARK 465 DG B 10 REMARK 465 DA B 11 REMARK 465 DG B 12 REMARK 465 DG B 13 REMARK 465 DC B 14 REMARK 465 DA B 15 REMARK 465 DT B 16 REMARK 465 DT B 17 REMARK 465 DT B 18 REMARK 465 DG B 19 REMARK 465 DG B 20 REMARK 465 DC B 21 REMARK 465 DT B 22 REMARK 465 DA B 23 REMARK 465 DC B 63 REMARK 465 DT B 64 REMARK 465 DT B 65 REMARK 465 DC B 66 REMARK 465 DA B 67 REMARK 465 DC B 68 REMARK 465 DA B 69 REMARK 465 DG B 70 REMARK 465 U R -193 REMARK 465 A R -192 REMARK 465 G R -191 REMARK 465 G R -190 REMARK 465 G R -189 REMARK 465 U R -188 REMARK 465 A R -187 REMARK 465 G R -186 REMARK 465 A R -185 REMARK 465 U R -184 REMARK 465 A R -183 REMARK 465 A R -182 REMARK 465 U R -181 REMARK 465 C R -180 REMARK 465 U R -179 REMARK 465 U R -178 REMARK 465 U R -177 REMARK 465 G R -176 REMARK 465 U R -175 REMARK 465 A R -174 REMARK 465 U R -173 REMARK 465 A R -172 REMARK 465 G R -171 REMARK 465 U R -170 REMARK 465 G R -169 REMARK 465 G R -168 REMARK 465 G R -167 REMARK 465 G R -166 REMARK 465 G R -165 REMARK 465 G R -164 REMARK 465 G R -163 REMARK 465 G R -162 REMARK 465 A R -161 REMARK 465 U R -160 REMARK 465 C R -159 REMARK 465 U R -158 REMARK 465 C R -157 REMARK 465 A R -156 REMARK 465 U R -155 REMARK 465 G R -154 REMARK 465 U R -153 REMARK 465 A R -152 REMARK 465 C R -151 REMARK 465 C R -150 REMARK 465 G R -149 REMARK 465 G R -148 REMARK 465 G R -147 REMARK 465 U R -146 REMARK 465 U R -145 REMARK 465 U R -144 REMARK 465 C R -143 REMARK 465 U R -142 REMARK 465 U R -141 REMARK 465 U R -140 REMARK 465 U R -139 REMARK 465 A R -138 REMARK 465 U R -137 REMARK 465 U R -136 REMARK 465 U R -135 REMARK 465 G R -134 REMARK 465 A R -133 REMARK 465 U R -132 REMARK 465 U R -131 REMARK 465 U R -130 REMARK 465 U R -129 REMARK 465 C R -128 REMARK 465 A R -127 REMARK 465 A R -126 REMARK 465 U R -125 REMARK 465 A R -124 REMARK 465 A R -123 REMARK 465 A R -122 REMARK 465 A R -121 REMARK 465 C R -120 REMARK 465 A R -119 REMARK 465 G R -118 REMARK 465 A R -117 REMARK 465 C R -116 REMARK 465 G R -115 REMARK 465 G R -114 REMARK 465 U R -113 REMARK 465 A R -112 REMARK 465 G R -111 REMARK 465 C R -110 REMARK 465 U R -109 REMARK 465 A R -108 REMARK 465 G R -107 REMARK 465 G R -106 REMARK 465 U R -105 REMARK 465 U R -104 REMARK 465 C R -103 REMARK 465 G R -102 REMARK 465 C R -101 REMARK 465 A R -100 REMARK 465 A R -99 REMARK 465 G R -98 REMARK 465 G R -97 REMARK 465 C R -96 REMARK 465 A R -95 REMARK 465 G R -94 REMARK 465 C R -93 REMARK 465 C R -92 REMARK 465 A R -91 REMARK 465 C R -90 REMARK 465 A R -89 REMARK 465 A R -88 REMARK 465 G R -87 REMARK 465 C R -86 REMARK 465 C R -85 REMARK 465 A R -84 REMARK 465 A R -83 REMARK 465 A R -82 REMARK 465 G R -81 REMARK 465 A R -80 REMARK 465 U R -79 REMARK 465 A R -78 REMARK 465 G R -77 REMARK 465 G R -76 REMARK 465 U R -75 REMARK 465 A R -74 REMARK 465 G R -73 REMARK 465 G R -72 REMARK 465 G R -71 REMARK 465 U R -70 REMARK 465 G R -69 REMARK 465 C R -68 REMARK 465 U R -67 REMARK 465 C R -66 REMARK 465 A R -65 REMARK 465 U R -64 REMARK 465 A R -63 REMARK 465 G R -62 REMARK 465 U R -61 REMARK 465 G R -60 REMARK 465 A R -59 REMARK 465 G R -58 REMARK 465 U R -57 REMARK 465 A R -56 REMARK 465 G R -55 REMARK 465 G R -54 REMARK 465 G R -53 REMARK 465 A R -52 REMARK 465 C R -51 REMARK 465 A R -50 REMARK 465 G R -49 REMARK 465 U R -48 REMARK 465 G R -47 REMARK 465 C R -46 REMARK 465 C R -45 REMARK 465 U R -44 REMARK 465 U R -43 REMARK 465 U R -42 REMARK 465 U R -41 REMARK 465 G R -40 REMARK 465 A R -39 REMARK 465 U R -38 REMARK 465 U R -37 REMARK 465 C R -36 REMARK 465 A R -35 REMARK 465 C R -34 REMARK 465 A R -33 REMARK 465 A R -32 REMARK 465 C R -31 REMARK 465 G R -30 REMARK 465 C R -29 REMARK 465 G R -28 REMARK 465 U R -27 REMARK 465 C R -26 REMARK 465 A R -25 REMARK 465 A R -24 REMARK 465 U R -23 REMARK 465 A R -22 REMARK 465 C R -21 REMARK 465 C R -20 REMARK 465 A R -19 REMARK 465 U R -18 REMARK 465 C R -17 REMARK 465 U R -16 REMARK 465 G R -15 REMARK 465 A R -14 REMARK 465 C R -13 REMARK 465 A R -12 REMARK 465 C R -11 REMARK 465 G R -10 REMARK 465 G R -9 REMARK 465 A R -8 REMARK 465 U R -7 REMARK 465 A R -6 REMARK 465 C R -5 REMARK 465 C R -4 REMARK 465 C R -3 REMARK 465 U R -2 REMARK 465 U R -1 REMARK 465 A R 0 REMARK 465 C R 1 REMARK 465 C R 2 REMARK 465 G R 3 REMARK 465 G R 4 REMARK 465 A R 5 REMARK 465 C R 6 REMARK 465 U R 7 REMARK 465 U R 8 REMARK 465 G R 9 REMARK 465 U R 10 REMARK 465 C R 11 REMARK 465 A R 12 REMARK 465 U R 13 REMARK 465 G R 14 REMARK 465 A R 15 REMARK 465 U R 16 REMARK 465 C R 17 REMARK 465 U R 18 REMARK 465 C R 19 REMARK 465 C R 20 REMARK 465 C R 21 REMARK 465 A R 22 REMARK 465 G R 23 REMARK 465 A R 24 REMARK 465 C R 25 REMARK 465 U R 26 REMARK 465 U R 27 REMARK 465 G R 28 REMARK 465 U R 29 REMARK 465 C R 30 REMARK 465 C R 31 REMARK 465 A R 32 REMARK 465 A R 33 REMARK 465 U R 49 REMARK 465 U R 50 REMARK 465 U R 51 REMARK 465 A R 52 REMARK 465 A R 74 REMARK 465 U R 75 REMARK 465 A R 76 REMARK 465 U R 77 REMARK 465 U R 78 REMARK 465 A R 79 REMARK 465 A R 80 REMARK 465 U R 81 REMARK 465 U R 82 REMARK 465 A R 83 REMARK 465 U R 84 REMARK 465 A R 85 REMARK 465 U R 86 REMARK 465 DC T 1 REMARK 465 DT T 2 REMARK 465 DG T 3 REMARK 465 DT T 4 REMARK 465 DG T 5 REMARK 465 DA T 6 REMARK 465 DA T 7 REMARK 465 DG T 8 REMARK 465 DT T 60 REMARK 465 DC T 61 REMARK 465 DG T 62 REMARK 465 DT T 63 REMARK 465 DC T 64 REMARK 465 DA T 65 REMARK 465 DT T 66 REMARK 465 DC T 67 REMARK 465 DT T 68 REMARK 465 DA T 69 REMARK 465 DA T 70 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DT P 24 O3' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 933 OP1 DA B 31 1.95 REMARK 500 OH TYR A 257 O PHE A 407 2.01 REMARK 500 OH TYR A 774 OP2 DG P 20 2.03 REMARK 500 O VAL A 1097 OG1 THR A 1101 2.08 REMARK 500 O LYS A 559 OG1 THR A 563 2.12 REMARK 500 ND2 ASN A 1007 O4' DT B 26 2.12 REMARK 500 O2' C R 40 N1 DA T 45 2.14 REMARK 500 O CYS A 1008 NH2 ARG A 1015 2.15 REMARK 500 OG SER A 368 N1 A R 95 2.16 REMARK 500 O2 DC B 61 O6 DG T 10 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC B 61 C1' DC B 61 N1 0.086 REMARK 500 DC T 9 C1' DC T 9 N1 -0.115 REMARK 500 DC T 9 C4 DC T 9 N4 -0.055 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG B 34 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DT B 35 O3' - P - OP2 ANGL. DEV. = -23.3 DEGREES REMARK 500 DT B 35 O3' - P - OP1 ANGL. DEV. = -20.8 DEGREES REMARK 500 DT B 35 O5' - P - OP1 ANGL. DEV. = 7.8 DEGREES REMARK 500 DC B 57 O3' - P - OP2 ANGL. DEV. = 25.4 DEGREES REMARK 500 DC B 57 O3' - P - OP1 ANGL. DEV. = -27.1 DEGREES REMARK 500 DC B 57 OP1 - P - OP2 ANGL. DEV. = -39.5 DEGREES REMARK 500 DC B 57 O5' - P - OP1 ANGL. DEV. = 23.4 DEGREES REMARK 500 DC B 57 O5' - P - OP2 ANGL. DEV. = -32.2 DEGREES REMARK 500 DC B 57 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG B 60 C3' - C2' - C1' ANGL. DEV. = -5.5 DEGREES REMARK 500 DG B 60 O4' - C1' - N9 ANGL. DEV. = 3.3 DEGREES REMARK 500 DG T 12 O3' - P - OP2 ANGL. DEV. = -34.3 DEGREES REMARK 500 DG T 12 O3' - P - OP1 ANGL. DEV. = 25.6 DEGREES REMARK 500 DG T 12 OP1 - P - OP2 ANGL. DEV. = -42.1 DEGREES REMARK 500 DG T 12 O5' - P - OP1 ANGL. DEV. = -25.1 DEGREES REMARK 500 DG T 12 O5' - P - OP2 ANGL. DEV. = 20.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 13 -158.14 -150.73 REMARK 500 ILE A 145 -130.14 -55.12 REMARK 500 ASN A 146 -7.85 56.25 REMARK 500 ARG A 166 -61.61 -108.59 REMARK 500 LYS A 355 -19.11 74.86 REMARK 500 ASP A 362 -5.83 77.46 REMARK 500 CYS A 366 31.44 -97.60 REMARK 500 PRO A 431 39.79 -83.59 REMARK 500 ASP A 443 87.40 -158.02 REMARK 500 SER A 477 149.50 -171.27 REMARK 500 THR A 603 78.02 -100.16 REMARK 500 ALA A 652 115.68 -161.28 REMARK 500 ALA A 656 -126.39 60.41 REMARK 500 SER A 703 -159.50 -150.61 REMARK 500 ASP A 784 -61.17 -92.20 REMARK 500 CYS A 858 -31.53 -139.87 REMARK 500 ASN A 882 59.38 -95.02 REMARK 500 PRO A 891 -97.50 -103.37 REMARK 500 SER A 892 -103.80 43.37 REMARK 500 SER A 893 -112.32 56.88 REMARK 500 PRO A 896 69.96 -69.15 REMARK 500 VAL A 899 80.70 -2.35 REMARK 500 SER A 933 -49.47 156.96 REMARK 500 PRO A 974 60.73 -69.63 REMARK 500 GLN A 984 -121.08 58.72 REMARK 500 PHE A1111 79.79 -112.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 166 0.26 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 27 NE2 REMARK 620 2 HIS A 32 ND1 154.9 REMARK 620 3 HIS A 32 NE2 104.1 52.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 41 SG REMARK 620 2 CYS A 44 SG 112.7 REMARK 620 3 HIS A 57 NE2 125.5 107.9 REMARK 620 4 CYS A 61 SG 112.8 100.1 93.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 76 SG REMARK 620 2 CYS A 79 SG 117.4 REMARK 620 3 HIS A 92 NE2 130.6 89.6 REMARK 620 4 HIS A 97 NE2 108.0 103.5 104.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1205 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 557 O REMARK 620 2 ASP A 657 OD2 96.7 REMARK 620 3 TTP A1206 O1A 125.0 69.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1204 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 991 SG REMARK 620 2 CYS A 994 SG 107.8 REMARK 620 3 HIS A1003 NE2 116.4 94.5 REMARK 620 4 CYS A1008 SG 107.3 112.0 117.9 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-49516 RELATED DB: EMDB REMARK 900 STRUCTURE OF R2 RETROTRANSPOSON PROTEIN FROM TAENIOPYGIA GUTTATA REMARK 900 INITIATING TARGET-PRIMED REVERSE TRANSCRIPTION DBREF 9NL3 A 1 1169 PDB 9NL3 9NL3 1 1169 DBREF 9NL3 B 1 70 PDB 9NL3 9NL3 1 70 DBREF 9NL3 P 12 24 PDB 9NL3 9NL3 12 24 DBREF 9NL3 R -193 103 PDB 9NL3 9NL3 -193 103 DBREF 9NL3 T 1 70 PDB 9NL3 9NL3 1 70 SEQRES 1 A 1169 MET VAL THR VAL PRO ASP LYS ASN PRO PRO CYS PRO CYS SEQRES 2 A 1169 CYS GLY THR ARG VAL ASN SER VAL LEU ASN LEU ILE GLU SEQRES 3 A 1169 HIS LEU LYS VAL SER HIS GLY LYS ARG GLY VAL CYS PHE SEQRES 4 A 1169 ARG CYS ALA LYS CYS GLY LYS GLU ASN SER ASN TYR HIS SEQRES 5 A 1169 SER VAL VAL CYS HIS PHE PRO LYS CYS ARG GLY PRO GLU SEQRES 6 A 1169 THR GLU LYS ALA PRO ALA GLY GLU TRP ILE CYS GLU VAL SEQRES 7 A 1169 CYS ASN ARG ASP PHE THR THR LYS ILE GLY LEU GLY GLN SEQRES 8 A 1169 HIS LYS ARG LEU ALA HIS PRO ALA VAL ARG ASN GLN GLU SEQRES 9 A 1169 ARG ILE VAL ALA SER GLN PRO LYS GLU THR SER ASN ARG SEQRES 10 A 1169 GLY ALA HIS LYS ARG CYS TRP THR LYS GLU GLU GLU GLU SEQRES 11 A 1169 LEU LEU ILE ARG LEU GLU ALA GLN PHE GLU GLY ASN LYS SEQRES 12 A 1169 ASN ILE ASN LYS LEU ILE ALA GLU HIS ILE THR THR LYS SEQRES 13 A 1169 THR ALA LYS GLN ILE SER ASP LYS ARG ARG LEU LEU SER SEQRES 14 A 1169 ARG LYS PRO ALA GLU GLU PRO ARG GLU GLU PRO GLY THR SEQRES 15 A 1169 CYS HIS HIS THR ARG ARG ALA ALA ALA SER LEU ARG THR SEQRES 16 A 1169 GLU PRO GLU MET SER HIS HIS ALA GLN ALA GLU ASP ARG SEQRES 17 A 1169 ASP ASN GLY PRO GLY ARG ARG PRO LEU PRO GLY ARG ALA SEQRES 18 A 1169 ALA ALA GLY GLY ARG THR MET ASP GLU ILE ARG ARG HIS SEQRES 19 A 1169 PRO ASP LYS GLY ASN GLY GLN GLN ARG PRO THR LYS GLN SEQRES 20 A 1169 LYS SER GLU GLU GLN LEU GLN ALA TYR TYR LYS LYS THR SEQRES 21 A 1169 LEU GLU GLU ARG LEU SER ALA GLY ALA LEU ASN THR PHE SEQRES 22 A 1169 PRO ARG ALA PHE LYS GLN VAL MET GLU GLY ARG ASP ILE SEQRES 23 A 1169 LYS LEU VAL ILE ASN GLN THR ALA GLN ASP CYS PHE GLY SEQRES 24 A 1169 CYS LEU GLU SER ILE SER GLN ILE ARG THR ALA THR ARG SEQRES 25 A 1169 ASP LYS LYS ASP THR VAL THR ARG GLU LYS HIS PRO LYS SEQRES 26 A 1169 LYS PRO PHE GLN LYS TRP MET LYS ASP ARG ALA ILE LYS SEQRES 27 A 1169 LYS GLY ASN TYR LEU ARG PHE GLN ARG LEU PHE TYR LEU SEQRES 28 A 1169 ASP ARG GLY LYS LEU ALA LYS ILE ILE LEU ASP ASP ILE SEQRES 29 A 1169 GLU CYS LEU SER CYS ASP ILE PRO LEU SER GLU ILE TYR SEQRES 30 A 1169 SER VAL PHE LYS THR ARG TRP GLU THR THR GLY SER PHE SEQRES 31 A 1169 LYS SER LEU GLY ASP PHE LYS THR TYR GLY LYS ALA ASP SEQRES 32 A 1169 ASN THR ALA PHE ARG GLU LEU ILE THR ALA LYS GLU ILE SEQRES 33 A 1169 GLU LYS ASN VAL GLN GLU MET SER LYS GLY SER ALA PRO SEQRES 34 A 1169 GLY PRO ASP GLY ILE THR LEU GLY ASP VAL VAL LYS MET SEQRES 35 A 1169 ASP PRO GLU PHE SER ARG THR MET GLU ILE PHE ASN LEU SEQRES 36 A 1169 TRP LEU THR THR GLY LYS ILE PRO ASP MET VAL ARG GLY SEQRES 37 A 1169 CYS ARG THR VAL LEU ILE PRO LYS SER SER LYS PRO ASP SEQRES 38 A 1169 ARG LEU LYS ASP ILE ASN ASN TRP ARG PRO ILE THR ILE SEQRES 39 A 1169 GLY SER ILE LEU LEU ARG LEU PHE SER ARG ILE VAL THR SEQRES 40 A 1169 ALA ARG LEU SER LYS ALA CYS PRO LEU ASN PRO ARG GLN SEQRES 41 A 1169 ARG GLY PHE ILE ARG ALA ALA GLY CYS SER GLU ASN LEU SEQRES 42 A 1169 LYS LEU LEU GLN THR ILE ILE TRP SER ALA LYS ARG GLU SEQRES 43 A 1169 HIS ARG PRO LEU GLY VAL VAL PHE VAL ASP ILE ALA LYS SEQRES 44 A 1169 ALA PHE ASP THR VAL SER HIS GLN HIS ILE ILE HIS ALA SEQRES 45 A 1169 LEU GLN GLN ARG GLU VAL ASP PRO HIS ILE VAL GLY LEU SEQRES 46 A 1169 VAL SER ASN MET TYR GLU ASN ILE SER THR TYR ILE THR SEQRES 47 A 1169 THR LYS ARG ASN THR HIS THR ASP LYS ILE GLN ILE ARG SEQRES 48 A 1169 VAL GLY VAL LYS GLN GLY ASP PRO MET SER PRO LEU LEU SEQRES 49 A 1169 PHE ASN LEU ALA MET ASP PRO LEU LEU CYS LYS LEU GLU SEQRES 50 A 1169 GLU SER GLY LYS GLY TYR HIS ARG GLY GLN SER SER ILE SEQRES 51 A 1169 THR ALA MET ALA PHE ALA ASP ASP LEU VAL LEU LEU SER SEQRES 52 A 1169 ASP SER TRP GLU ASN MET ASN THR ASN ILE SER ILE LEU SEQRES 53 A 1169 GLU THR PHE CYS ASN LEU THR GLY LEU LYS THR GLN GLY SEQRES 54 A 1169 GLN LYS CYS HIS GLY PHE TYR ILE LYS PRO THR LYS ASP SEQRES 55 A 1169 SER TYR THR ILE ASN ASP CYS ALA ALA TRP THR ILE ASN SEQRES 56 A 1169 GLY THR PRO LEU ASN MET ILE ASP PRO GLY GLU SER GLU SEQRES 57 A 1169 LYS TYR LEU GLY LEU GLN PHE ASP PRO TRP ILE GLY ILE SEQRES 58 A 1169 ALA ARG SER GLY LEU SER THR LYS LEU ASP PHE TRP LEU SEQRES 59 A 1169 GLN ARG ILE ASP GLN ALA PRO LEU LYS PRO LEU GLN LYS SEQRES 60 A 1169 THR ASP ILE LEU LYS THR TYR THR ILE PRO ARG LEU ILE SEQRES 61 A 1169 TYR ILE ALA ASP HIS SER GLU VAL LYS THR ALA LEU LEU SEQRES 62 A 1169 GLU THR LEU ASP GLN LYS ILE ARG THR ALA VAL LYS GLU SEQRES 63 A 1169 TRP LEU HIS LEU PRO PRO CYS THR CYS ASP ALA ILE LEU SEQRES 64 A 1169 TYR SER SER THR ARG ASP GLY GLY LEU GLY ILE THR LYS SEQRES 65 A 1169 LEU ALA GLY LEU ILE PRO SER VAL GLN ALA ARG ARG LEU SEQRES 66 A 1169 HIS ARG ILE ALA GLN SER SER ASP ASP THR MET LYS CYS SEQRES 67 A 1169 PHE MET GLU LYS GLU LYS MET GLU GLN LEU HIS LYS LYS SEQRES 68 A 1169 LEU TRP ILE GLN ALA GLY GLY ASP ARG GLU ASN ILE PRO SEQRES 69 A 1169 SER ILE TRP GLU ALA PRO PRO SER SER GLU PRO PRO ASN SEQRES 70 A 1169 ASN VAL SER THR ASN SER GLU TRP GLU ALA PRO THR GLN SEQRES 71 A 1169 LYS ASP LYS PHE PRO LYS PRO CYS ASN TRP ARG LYS ASN SEQRES 72 A 1169 GLU PHE LYS LYS TRP THR LYS LEU ALA SER GLN GLY ARG SEQRES 73 A 1169 GLY ILE VAL ASN PHE GLU ARG ASP LYS ILE SER ASN HIS SEQRES 74 A 1169 TRP ILE GLN TYR TYR ARG ARG ILE PRO HIS ARG LYS LEU SEQRES 75 A 1169 LEU THR ALA LEU GLN LEU ARG ALA ASN VAL TYR PRO THR SEQRES 76 A 1169 ARG GLU PHE LEU ALA ARG GLY ARG GLN ASP GLN TYR ILE SEQRES 77 A 1169 LYS ALA CYS ARG HIS CYS ASP ALA ASP ILE GLU SER CYS SEQRES 78 A 1169 ALA HIS ILE ILE GLY ASN CYS PRO VAL THR GLN ASP ALA SEQRES 79 A 1169 ARG ILE LYS ARG HIS ASN TYR ILE CYS GLU LEU LEU LEU SEQRES 80 A 1169 GLU GLU ALA LYS LYS LYS ASP TRP VAL VAL PHE LYS GLU SEQRES 81 A 1169 PRO HIS ILE ARG ASP SER ASN LYS GLU LEU TYR LYS PRO SEQRES 82 A 1169 ASP LEU ILE PHE VAL LYS ASP ALA ARG ALA LEU VAL VAL SEQRES 83 A 1169 ASP VAL THR VAL ARG TYR GLU ALA ALA LYS SER SER LEU SEQRES 84 A 1169 GLU GLU ALA ALA ALA GLU LYS VAL ARG LYS TYR LYS HIS SEQRES 85 A 1169 LEU GLU THR GLU VAL ARG HIS LEU THR ASN ALA LYS ASP SEQRES 86 A 1169 VAL THR PHE VAL GLY PHE PRO LEU GLY ALA ARG GLY LYS SEQRES 87 A 1169 TRP HIS GLN ASP ASN PHE LYS LEU LEU THR GLU LEU GLY SEQRES 88 A 1169 LEU SER LYS SER ARG GLN VAL LYS MET ALA GLU THR PHE SEQRES 89 A 1169 SER THR VAL ALA LEU PHE SER SER VAL ASP ILE VAL HIS SEQRES 90 A 1169 MET PHE ALA SER ARG ALA ARG LYS SER MET VAL MET SEQRES 1 B 70 DT DT DA DG DA DT DG DA DC DG DA DG DG SEQRES 2 B 70 DC DA DT DT DT DG DG DC DT DA DC DC DT SEQRES 3 B 70 DT DA DA DG DA DG DA DG DT DC DA DT DA SEQRES 4 B 70 DG DT DT DA DC DT DC DC DC DG DC DC DG SEQRES 5 B 70 DT DT DT DA DC DC DC DG DC DG DC DT DT SEQRES 6 B 70 DC DA DC DA DG SEQRES 1 P 13 DG DG DC DA DT DT DT DG DG DC DT DA DT SEQRES 1 R 297 U A G G G U A G A U A A U SEQRES 2 R 297 C U U U G U A U A G U G G SEQRES 3 R 297 G G G G G G A U C U C A U SEQRES 4 R 297 G U A C C G G G U U U C U SEQRES 5 R 297 U U U A U U U G A U U U U SEQRES 6 R 297 C A A U A A A A C A G A C SEQRES 7 R 297 G G U A G C U A G G U U C SEQRES 8 R 297 G C A A G G C A G C C A C SEQRES 9 R 297 A A G C C A A A G A U A G SEQRES 10 R 297 G U A G G G U G C U C A U SEQRES 11 R 297 A G U G A G U A G G G A C SEQRES 12 R 297 A G U G C C U U U U G A U SEQRES 13 R 297 U C A C A A C G C G U C A SEQRES 14 R 297 A U A C C A U C U G A C A SEQRES 15 R 297 C G G A U A C C C U U A C SEQRES 16 R 297 C G G A C U U G U C A U G SEQRES 17 R 297 A U C U C C C A G A C U U SEQRES 18 R 297 G U C C A A G G U G G A C SEQRES 19 R 297 G G G C C A C C U U U A C SEQRES 20 R 297 U U A A C C C G G A A A A SEQRES 21 R 297 G G A A C A U A U A U U A SEQRES 22 R 297 A U U A U A U G U G U U C SEQRES 23 R 297 G G A A A A U A G C C SEQRES 1 T 70 DC DT DG DT DG DA DA DG DC DG DC DG DG SEQRES 2 T 70 DG DT DA DA DA DC DG DG DC DG DG DG DA SEQRES 3 T 70 DG DT DA DA DC DT DA DT DG DA DC DT DC SEQRES 4 T 70 DT DC DT DT DA DA DG DG DT DA DG DC DC SEQRES 5 T 70 DA DA DA DT DG DC DC DT DC DG DT DC DA SEQRES 6 T 70 DT DC DT DA DA HET ZN A1201 1 HET ZN A1202 1 HET ZN A1203 1 HET ZN A1204 1 HET MG A1205 1 HET TTP A1206 29 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM TTP THYMIDINE-5'-TRIPHOSPHATE FORMUL 6 ZN 4(ZN 2+) FORMUL 10 MG MG 2+ FORMUL 11 TTP C10 H17 N2 O14 P3 HELIX 1 AA1 SER A 20 SER A 31 1 12 HELIX 2 AA2 ASN A 50 PHE A 58 1 9 HELIX 3 AA3 PRO A 59 CYS A 61 5 3 HELIX 4 AA4 THR A 85 HIS A 97 1 13 HELIX 5 AA5 HIS A 97 GLN A 110 1 14 HELIX 6 AA6 THR A 125 ALA A 137 1 13 HELIX 7 AA7 LEU A 148 ILE A 153 1 6 HELIX 8 AA8 THR A 157 LYS A 171 1 15 HELIX 9 AA9 GLN A 252 ALA A 267 1 16 HELIX 10 AB1 PHE A 277 GLU A 282 1 6 HELIX 11 AB2 ASP A 285 ILE A 304 1 20 HELIX 12 AB3 ILE A 304 ARG A 312 1 9 HELIX 13 AB4 LYS A 330 ASP A 352 1 23 HELIX 14 AB5 ASP A 352 LEU A 361 1 10 HELIX 15 AB6 PRO A 372 GLU A 385 1 14 HELIX 16 AB7 ASN A 404 GLU A 409 1 6 HELIX 17 AB8 THR A 412 MET A 423 1 12 HELIX 18 AB9 THR A 435 ASP A 443 1 9 HELIX 19 AC1 SER A 447 GLY A 460 1 14 HELIX 20 AC2 LYS A 479 LYS A 484 1 6 HELIX 21 AC3 ASP A 485 ASN A 487 5 3 HELIX 22 AC4 SER A 496 CYS A 514 1 19 HELIX 23 AC5 ALA A 527 HIS A 547 1 21 HELIX 24 AC6 LYS A 559 VAL A 564 1 6 HELIX 25 AC7 SER A 565 ARG A 576 1 12 HELIX 26 AC8 ASP A 579 TYR A 590 1 12 HELIX 27 AC9 PRO A 619 GLY A 640 1 22 HELIX 28 AD1 GLU A 667 GLY A 684 1 18 HELIX 29 AD2 GLY A 745 GLN A 759 1 15 HELIX 30 AD3 LYS A 763 THR A 775 1 13 HELIX 31 AD4 THR A 775 SER A 786 1 12 HELIX 32 AD5 LYS A 789 LEU A 808 1 20 HELIX 33 AD6 CYS A 815 SER A 821 1 7 HELIX 34 AD7 SER A 822 GLY A 826 5 5 HELIX 35 AD8 LYS A 832 GLN A 850 1 19 HELIX 36 AD9 THR A 855 PHE A 859 5 5 HELIX 37 AE1 GLU A 861 ALA A 876 1 16 HELIX 38 AE2 ASN A 919 LEU A 931 1 13 HELIX 39 AE3 GLY A 937 GLU A 942 5 6 HELIX 40 AE4 ASN A 948 TYR A 953 1 6 HELIX 41 AE5 PRO A 958 ALA A 970 1 13 HELIX 42 AE6 THR A 975 ALA A 980 1 6 HELIX 43 AE7 ARG A 983 TYR A 987 5 5 HELIX 44 AE8 SER A 1000 ASN A 1007 1 8 HELIX 45 AE9 CYS A 1008 VAL A 1010 5 3 HELIX 46 AF1 THR A 1011 LYS A 1033 1 23 HELIX 47 AF2 SER A 1077 LYS A 1091 1 15 HELIX 48 AF3 GLU A 1094 ASN A 1102 1 9 HELIX 49 AF4 ASP A 1122 LEU A 1130 1 9 HELIX 50 AF5 SER A 1135 VAL A 1168 1 34 SHEET 1 AA1 2 PHE A 39 ARG A 40 0 SHEET 2 AA1 2 GLU A 47 ASN A 48 -1 O ASN A 48 N PHE A 39 SHEET 1 AA2 2 TRP A 74 ILE A 75 0 SHEET 2 AA2 2 ASP A 82 PHE A 83 -1 O PHE A 83 N TRP A 74 SHEET 1 AA3 4 TRP A 489 GLY A 495 0 SHEET 2 AA3 4 CYS A 469 PRO A 475 -1 N ARG A 470 O ILE A 494 SHEET 3 AA3 4 SER A 594 THR A 598 1 O THR A 598 N THR A 471 SHEET 4 AA3 4 ILE A 608 GLN A 609 -1 O ILE A 608 N THR A 595 SHEET 1 AA4 5 ALA A 652 PHE A 655 0 SHEET 2 AA4 5 ASP A 658 SER A 663 -1 O VAL A 660 N MET A 653 SHEET 3 AA4 5 LEU A 550 ASP A 556 -1 N VAL A 553 O LEU A 661 SHEET 4 AA4 5 HIS A 693 PRO A 699 -1 O ILE A 697 N LEU A 550 SHEET 5 AA4 5 TYR A 704 ILE A 706 -1 O THR A 705 N LYS A 698 SHEET 1 AA5 5 ALA A 652 PHE A 655 0 SHEET 2 AA5 5 ASP A 658 SER A 663 -1 O VAL A 660 N MET A 653 SHEET 3 AA5 5 LEU A 550 ASP A 556 -1 N VAL A 553 O LEU A 661 SHEET 4 AA5 5 HIS A 693 PRO A 699 -1 O ILE A 697 N LEU A 550 SHEET 5 AA5 5 ASN A 720 MET A 721 1 O ASN A 720 N GLY A 694 SHEET 1 AA6 2 TYR A 643 HIS A 644 0 SHEET 2 AA6 2 SER A 649 ILE A 650 -1 O ILE A 650 N TYR A 643 SHEET 1 AA7 2 THR A 713 ILE A 714 0 SHEET 2 AA7 2 THR A 717 PRO A 718 -1 O THR A 717 N ILE A 714 SHEET 1 AA8 3 GLU A 728 TYR A 730 0 SHEET 2 AA8 3 LEU A 733 ASP A 736 -1 O LEU A 733 N TYR A 730 SHEET 3 AA8 3 GLY A 740 ILE A 741 -1 O GLY A 740 N ASP A 736 SHEET 1 AA9 4 VAL A1036 VAL A1037 0 SHEET 2 AA9 4 LEU A1055 VAL A1058 -1 O VAL A1058 N VAL A1036 SHEET 3 AA9 4 ALA A1063 ARG A1071 -1 O VAL A1066 N LEU A1055 SHEET 4 AA9 4 VAL A1106 GLY A1114 1 O PHE A1111 N ASP A1067 SSBOND 1 CYS A 11 CYS A 13 1555 1555 2.03 LINK NE2 HIS A 27 ZN ZN A1201 1555 1555 2.31 LINK ND1 HIS A 32 ZN ZN A1201 1555 1555 2.55 LINK NE2 HIS A 32 ZN ZN A1201 1555 1555 2.31 LINK SG CYS A 41 ZN ZN A1202 1555 1555 2.32 LINK SG CYS A 44 ZN ZN A1202 1555 1555 2.30 LINK NE2 HIS A 57 ZN ZN A1202 1555 1555 2.07 LINK SG CYS A 61 ZN ZN A1202 1555 1555 2.30 LINK SG CYS A 76 ZN ZN A1203 1555 1555 2.30 LINK SG CYS A 79 ZN ZN A1203 1555 1555 2.30 LINK NE2 HIS A 92 ZN ZN A1203 1555 1555 2.03 LINK NE2 HIS A 97 ZN ZN A1203 1555 1555 2.04 LINK O ILE A 557 MG MG A1205 1555 1555 2.16 LINK OD2 ASP A 657 MG MG A1205 1555 1555 2.86 LINK SG CYS A 991 ZN ZN A1204 1555 1555 2.31 LINK SG CYS A 994 ZN ZN A1204 1555 1555 2.32 LINK NE2 HIS A1003 ZN ZN A1204 1555 1555 2.11 LINK SG CYS A1008 ZN ZN A1204 1555 1555 2.32 LINK MG MG A1205 O1A TTP A1206 1555 1555 1.85 CISPEP 1 VAL A 4 PRO A 5 0 -4.65 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 8656 MET A1169 TER 9448 DG B 62 ANISOU 9593 P DG P 19 7504 7504 7504 0 0 0 P ANISOU 9594 OP1 DG P 19 7504 7504 7504 0 0 0 O ANISOU 9595 OP2 DG P 19 7504 7504 7504 0 0 0 O ANISOU 9596 O5' DG P 19 7504 7504 7504 0 0 0 O ANISOU 9597 C5' DG P 19 7504 7504 7504 0 0 0 C ANISOU 9598 C4' DG P 19 7504 7504 7504 0 0 0 C ANISOU 9599 O4' DG P 19 7504 7504 7504 0 0 0 O ANISOU 9600 C3' DG P 19 7504 7504 7504 0 0 0 C ANISOU 9601 O3' DG P 19 7504 7504 7504 0 0 0 O ANISOU 9602 C2' DG P 19 7504 7504 7504 0 0 0 C ANISOU 9603 C1' DG P 19 7504 7504 7504 0 0 0 C ANISOU 9604 N9 DG P 19 7504 7504 7504 0 0 0 N ANISOU 9605 C8 DG P 19 7504 7504 7504 0 0 0 C ANISOU 9606 N7 DG P 19 7504 7504 7504 0 0 0 N ANISOU 9607 C5 DG P 19 7504 7504 7504 0 0 0 C ANISOU 9608 C6 DG P 19 7504 7504 7504 0 0 0 C ANISOU 9609 O6 DG P 19 7504 7504 7504 0 0 0 O ANISOU 9610 N1 DG P 19 7504 7504 7504 0 0 0 N ANISOU 9611 C2 DG P 19 7504 7504 7504 0 0 0 C ANISOU 9612 N2 DG P 19 7504 7504 7504 0 0 0 N ANISOU 9613 N3 DG P 19 7504 7504 7504 0 0 0 N ANISOU 9614 C4 DG P 19 7504 7504 7504 0 0 0 C ANISOU 9615 P DG P 20 7504 7504 7504 0 0 0 P ANISOU 9616 OP1 DG P 20 7504 7504 7504 0 0 0 O ANISOU 9617 OP2 DG P 20 7504 7504 7504 0 0 0 O ANISOU 9618 O5' DG P 20 7504 7504 7504 0 0 0 O ANISOU 9619 C5' DG P 20 7504 7504 7504 0 0 0 C ANISOU 9620 C4' DG P 20 7504 7504 7504 0 0 0 C ANISOU 9621 O4' DG P 20 7504 7504 7504 0 0 0 O ANISOU 9622 C3' DG P 20 7504 7504 7504 0 0 0 C ANISOU 9623 O3' DG P 20 7504 7504 7504 0 0 0 O ANISOU 9624 C2' DG P 20 7504 7504 7504 0 0 0 C ANISOU 9625 C1' DG P 20 7504 7504 7504 0 0 0 C ANISOU 9637 P DC P 21 7504 7504 7504 0 0 0 P ANISOU 9638 OP1 DC P 21 7504 7504 7504 0 0 0 O ANISOU 9639 OP2 DC P 21 7504 7504 7504 0 0 0 O ANISOU 9640 O5' DC P 21 7504 7504 7504 0 0 0 O ANISOU 9641 C5' DC P 21 7504 7504 7504 0 0 0 C ANISOU 9642 C4' DC P 21 7504 7504 7504 0 0 0 C ANISOU 9643 O4' DC P 21 7504 7504 7504 0 0 0 O ANISOU 9644 C3' DC P 21 7504 7504 7504 0 0 0 C ANISOU 9645 O3' DC P 21 7504 7504 7504 0 0 0 O ANISOU 9646 C2' DC P 21 7504 7504 7504 0 0 0 C ANISOU 9647 C1' DC P 21 7504 7504 7504 0 0 0 C ANISOU 9656 P DT P 22 7504 7504 7504 0 0 0 P ANISOU 9657 OP1 DT P 22 7504 7504 7504 0 0 0 O ANISOU 9658 OP2 DT P 22 7504 7504 7504 0 0 0 O ANISOU 9659 O5' DT P 22 7504 7504 7504 0 0 0 O ANISOU 9660 C5' DT P 22 7504 7504 7504 0 0 0 C ANISOU 9661 C4' DT P 22 7504 7504 7504 0 0 0 C ANISOU 9662 O4' DT P 22 7504 7504 7504 0 0 0 O ANISOU 9663 C3' DT P 22 7504 7504 7504 0 0 0 C ANISOU 9664 O3' DT P 22 7504 7504 7504 0 0 0 O ANISOU 9665 C2' DT P 22 7504 7504 7504 0 0 0 C ANISOU 9666 C1' DT P 22 7504 7504 7504 0 0 0 C ANISOU 9676 P DA P 23 7504 7504 7504 0 0 0 P ANISOU 9677 OP1 DA P 23 7504 7504 7504 0 0 0 O ANISOU 9678 OP2 DA P 23 7504 7504 7504 0 0 0 O ANISOU 9679 O5' DA P 23 7504 7504 7504 0 0 0 O ANISOU 9680 C5' DA P 23 7504 7504 7504 0 0 0 C ANISOU 9681 C4' DA P 23 7504 7504 7504 0 0 0 C ANISOU 9682 O4' DA P 23 7504 7504 7504 0 0 0 O ANISOU 9683 C3' DA P 23 7504 7504 7504 0 0 0 C ANISOU 9684 O3' DA P 23 7504 7504 7504 0 0 0 O ANISOU 9685 C2' DA P 23 7504 7504 7504 0 0 0 C ANISOU 9686 C1' DA P 23 7504 7504 7504 0 0 0 C ANISOU 9687 N9 DA P 23 7504 7504 7504 0 0 0 N ANISOU 9688 C8 DA P 23 7504 7504 7504 0 0 0 C ANISOU 9689 N7 DA P 23 7504 7504 7504 0 0 0 N ANISOU 9690 C5 DA P 23 7504 7504 7504 0 0 0 C ANISOU 9691 C6 DA P 23 7504 7504 7504 0 0 0 C ANISOU 9692 N6 DA P 23 7504 7504 7504 0 0 0 N ANISOU 9693 N1 DA P 23 7504 7504 7504 0 0 0 N ANISOU 9694 C2 DA P 23 7504 7504 7504 0 0 0 C ANISOU 9695 N3 DA P 23 7504 7504 7504 0 0 0 N ANISOU 9696 C4 DA P 23 7504 7504 7504 0 0 0 C ANISOU 9697 P DT P 24 7504 7504 7504 0 0 0 P ANISOU 9699 OP2 DT P 24 7504 7504 7504 0 0 0 O ANISOU 9700 O5' DT P 24 7504 7504 7504 0 0 0 O ANISOU 9701 C5' DT P 24 7504 7504 7504 0 0 0 C ANISOU 9702 C4' DT P 24 7504 7504 7504 0 0 0 C ANISOU 9703 O4' DT P 24 7504 7504 7504 0 0 0 O ANISOU 9704 C3' DT P 24 7504 7504 7504 0 0 0 C ANISOU 9705 C2' DT P 24 7504 7504 7504 0 0 0 C ANISOU 9706 C1' DT P 24 7504 7504 7504 0 0 0 C TER 9716 DT P 24 ANISOU10686 P A R 96 76889 76889 76889 0 0 0 P ANISOU10687 OP1 A R 96 78472 78472 78472 0 0 0 O ANISOU10688 OP2 A R 96 78249 78249 78249 0 0 0 O ANISOU10689 O5' A R 96 77011 77011 77011 0 0 0 O ANISOU10690 C5' A R 96 74110 74110 74110 0 0 0 C ANISOU10691 C4' A R 96 74138 74138 74138 0 0 0 C ANISOU10692 O4' A R 96 74906 74906 74906 0 0 0 O ANISOU10693 C3' A R 96 74415 74415 74415 0 0 0 C ANISOU10694 O3' A R 96 74993 74993 74993 0 0 0 O ANISOU10695 C2' A R 96 74256 74256 74256 0 0 0 C ANISOU10696 O2' A R 96 74905 74905 74905 0 0 0 O ANISOU10697 C1' A R 96 73729 73729 73729 0 0 0 C ANISOU10708 P A R 97 58411 58411 58411 0 0 0 P ANISOU10709 OP1 A R 97 59692 59692 59692 0 0 0 O ANISOU10710 OP2 A R 97 59635 59635 59635 0 0 0 O ANISOU10711 O5' A R 97 57154 57154 57154 0 0 0 O ANISOU10712 C5' A R 97 54099 54099 54099 0 0 0 C ANISOU10713 C4' A R 97 54194 54194 54194 0 0 0 C ANISOU10714 O4' A R 97 54742 54742 54742 0 0 0 O ANISOU10715 C3' A R 97 53326 53326 53326 0 0 0 C ANISOU10716 O3' A R 97 55705 55705 55705 0 0 0 O ANISOU10717 C2' A R 97 51401 51401 51401 0 0 0 C ANISOU10718 O2' A R 97 52934 52934 52934 0 0 0 O ANISOU10719 C1' A R 97 51241 51241 51241 0 0 0 C ANISOU10730 P A R 98 55919 55919 55919 0 0 0 P ANISOU10731 OP1 A R 98 58979 58979 58979 0 0 0 O ANISOU10732 OP2 A R 98 58114 58114 58114 0 0 0 O ANISOU10733 O5' A R 98 55278 55278 55278 0 0 0 O ANISOU10734 C5' A R 98 53259 53259 53259 0 0 0 C ANISOU10735 C4' A R 98 53101 53101 53101 0 0 0 C ANISOU10736 O4' A R 98 53967 53967 53967 0 0 0 O ANISOU10737 C3' A R 98 50386 50386 50386 0 0 0 C ANISOU10738 O3' A R 98 52336 52336 52336 0 0 0 O ANISOU10739 C2' A R 98 49234 49234 49234 0 0 0 C ANISOU10740 O2' A R 98 51017 51017 51017 0 0 0 O ANISOU10741 C1' A R 98 49613 49613 49613 0 0 0 C TER 10857 C R 103 TER 11910 DC T 59 HETATM11911 ZN ZN A1201 116.986 85.994 109.676 1.00160.23 ZN HETATM11912 ZN ZN A1202 110.653 96.075 86.188 1.00149.23 ZN HETATM11913 ZN ZN A1203 129.521 110.536 77.142 1.00112.07 ZN HETATM11914 ZN ZN A1204 85.000 97.472 122.129 1.00103.63 ZN HETATM11915 MG MG A1205 142.697 133.678 104.241 1.00 92.23 MG HETATM11916 PA TTP A1206 141.982 132.826 107.340 0.65 81.65 P HETATM11917 O1A TTP A1206 142.219 133.514 106.018 0.65 80.34 O HETATM11918 O2A TTP A1206 141.006 131.684 107.183 0.65 80.33 O HETATM11919 O3A TTP A1206 143.372 132.306 107.964 0.65 83.77 O HETATM11920 PB TTP A1206 144.420 131.541 107.014 0.65 90.18 P HETATM11921 O1B TTP A1206 143.725 130.445 106.246 0.65 84.61 O HETATM11922 O2B TTP A1206 145.057 132.517 106.060 0.65 78.57 O HETATM11923 O3B TTP A1206 145.521 130.919 108.010 0.65 83.64 O HETATM11924 PG TTP A1206 146.695 129.989 107.414 0.65 95.51 P HETATM11925 O1G TTP A1206 146.521 129.854 105.920 0.65 81.86 O HETATM11926 O2G TTP A1206 146.623 128.630 108.066 0.65 82.04 O HETATM11927 O3G TTP A1206 148.050 130.588 107.708 0.65 87.75 O HETATM11928 O5' TTP A1206 141.430 133.879 108.419 0.65 77.80 O HETATM11929 C5' TTP A1206 140.185 134.534 108.195 0.65 79.08 C HETATM11930 C4' TTP A1206 139.953 135.532 109.320 0.65 80.67 C HETATM11931 O4' TTP A1206 138.559 135.797 109.506 0.65 79.34 O HETATM11932 C3' TTP A1206 140.469 135.018 110.652 0.65 84.14 C HETATM11933 O3' TTP A1206 141.835 135.374 110.869 0.65 85.15 O HETATM11934 C2' TTP A1206 139.539 135.651 111.668 0.65 82.04 C HETATM11935 C1' TTP A1206 138.245 135.872 110.901 0.65 79.61 C HETATM11936 N1 TTP A1206 137.344 134.791 111.295 0.65 80.14 N HETATM11937 C2 TTP A1206 136.560 134.913 112.464 0.65 81.50 C HETATM11938 O2 TTP A1206 136.616 135.966 113.134 0.65 78.65 O HETATM11939 N3 TTP A1206 135.744 133.926 112.856 0.65 82.77 N HETATM11940 C4 TTP A1206 135.665 132.787 112.161 0.65 81.98 C HETATM11941 O4 TTP A1206 134.900 131.868 112.527 0.65 80.76 O HETATM11942 C5 TTP A1206 136.485 132.629 110.938 0.65 81.67 C HETATM11943 C5M TTP A1206 136.425 131.365 110.123 0.65 82.83 C HETATM11944 C6 TTP A1206 137.314 133.671 110.564 0.65 79.16 C CONECT 81 94 CONECT 94 81 CONECT 20111911 CONECT 23811911 CONECT 24111911 CONECT 31011912 CONECT 33011912 CONECT 43211912 CONECT 46511912 CONECT 57911913 CONECT 60111913 CONECT 70511913 CONECT 74811913 CONECT 372811915 CONECT 451511915 CONECT 722211914 CONECT 724911914 CONECT 731411914 CONECT 734811914 CONECT11911 201 238 241 CONECT11912 310 330 432 465 CONECT11913 579 601 705 748 CONECT11914 7222 7249 7314 7348 CONECT11915 3728 451511917 CONECT1191611917119181191911928 CONECT119171191511916 CONECT1191811916 CONECT119191191611920 CONECT1192011919119211192211923 CONECT1192111920 CONECT1192211920 CONECT119231192011924 CONECT1192411923119251192611927 CONECT1192511924 CONECT1192611924 CONECT1192711924 CONECT119281191611929 CONECT119291192811930 CONECT11930119291193111932 CONECT119311193011935 CONECT11932119301193311934 CONECT1193311932 CONECT119341193211935 CONECT11935119311193411936 CONECT11936119351193711944 CONECT11937119361193811939 CONECT1193811937 CONECT119391193711940 CONECT11940119391194111942 CONECT1194111940 CONECT11942119401194311944 CONECT1194311942 CONECT119441193611942 MASTER 679 0 6 50 29 0 0 611939 5 53 126 END