HEADER DE NOVO PROTEIN 04-MAR-25 9NMZ TITLE CRYSTAL STRUCTURE OF LM4150 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LM4150; COMPND 3 CHAIN: A, B, C, D, E, F, G; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DE NOVO PROTEIN, DESIGN MODEL, ISOPEPTIDE, ML/AI EXPDTA X-RAY DIFFRACTION AUTHOR A.K.BERA,L.MILLES,D.BAKER REVDAT 1 30-SEP-26 9NMZ 0 JRNL AUTH L.MILLES,A.K.BERA,D.BAKER JRNL TITL DE NOVO DESIGN OF AUTOCATALYTICALLY FORMING INTRA- AND JRNL TITL 2 INTERMOLECULAR ISOPEPTIDE BONDS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 12355 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1239 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.5000 - 7.1800 0.97 1342 153 0.2336 0.2684 REMARK 3 2 7.1700 - 5.7100 1.00 1333 138 0.2495 0.2482 REMARK 3 3 5.7100 - 4.9900 1.00 1318 155 0.1822 0.2604 REMARK 3 4 4.9900 - 4.5300 1.00 1320 147 0.1740 0.2198 REMARK 3 5 4.5300 - 4.2100 1.00 1305 151 0.1834 0.2293 REMARK 3 6 4.2100 - 3.9600 1.00 1300 147 0.2023 0.2550 REMARK 3 7 3.9600 - 3.7600 0.60 773 89 0.2435 0.2400 REMARK 3 8 3.7600 - 3.6000 1.00 1307 140 0.2064 0.2898 REMARK 3 9 3.6000 - 3.4600 0.86 1118 119 0.2107 0.2899 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.353 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.469 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 73.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6744 REMARK 3 ANGLE : 0.411 9247 REMARK 3 CHIRALITY : 0.039 1187 REMARK 3 PLANARITY : 0.003 1144 REMARK 3 DIHEDRAL : 9.678 2347 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 1:120) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6578 -56.9178 -18.9062 REMARK 3 T TENSOR REMARK 3 T11: 0.4362 T22: 0.5250 REMARK 3 T33: 0.5667 T12: 0.0269 REMARK 3 T13: -0.0206 T23: -0.0823 REMARK 3 L TENSOR REMARK 3 L11: 2.8006 L22: 1.5342 REMARK 3 L33: 2.3729 L12: 0.1101 REMARK 3 L13: 0.9184 L23: 0.2178 REMARK 3 S TENSOR REMARK 3 S11: -0.0788 S12: -0.3177 S13: 0.2812 REMARK 3 S21: 0.4529 S22: -0.1601 S23: -0.2137 REMARK 3 S31: -0.2763 S32: -0.1216 S33: 0.1781 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN D AND RESSEQ 1:121) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1356 -55.0648 -7.5436 REMARK 3 T TENSOR REMARK 3 T11: 0.5286 T22: 0.5228 REMARK 3 T33: 0.4918 T12: 0.0081 REMARK 3 T13: -0.0261 T23: -0.0750 REMARK 3 L TENSOR REMARK 3 L11: 1.4016 L22: 1.6912 REMARK 3 L33: 2.0482 L12: -0.3682 REMARK 3 L13: 0.5751 L23: 0.6216 REMARK 3 S TENSOR REMARK 3 S11: 0.0922 S12: -0.2749 S13: 0.0246 REMARK 3 S21: 0.3038 S22: 0.0484 S23: 0.0100 REMARK 3 S31: 0.0260 S32: -0.0229 S33: -0.1481 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN B AND RESSEQ 1:120) REMARK 3 ORIGIN FOR THE GROUP (A): -25.9993 -76.1114 -2.2855 REMARK 3 T TENSOR REMARK 3 T11: 0.7217 T22: 0.5310 REMARK 3 T33: 0.5106 T12: -0.0043 REMARK 3 T13: 0.1841 T23: -0.0293 REMARK 3 L TENSOR REMARK 3 L11: 1.1449 L22: 1.3118 REMARK 3 L33: 2.4286 L12: -0.0364 REMARK 3 L13: 0.3636 L23: -0.2880 REMARK 3 S TENSOR REMARK 3 S11: -0.0653 S12: -0.1236 S13: -0.1781 REMARK 3 S21: 0.1189 S22: 0.0058 S23: -0.0593 REMARK 3 S31: 0.4889 S32: 0.2547 S33: 0.0527 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN C AND RESSEQ 1:121) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8286 -75.6464 -19.4337 REMARK 3 T TENSOR REMARK 3 T11: 0.5459 T22: 0.4545 REMARK 3 T33: 0.5080 T12: -0.0402 REMARK 3 T13: 0.0660 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 1.9266 L22: 2.1716 REMARK 3 L33: 2.3030 L12: 0.5107 REMARK 3 L13: 0.5359 L23: -0.8738 REMARK 3 S TENSOR REMARK 3 S11: 0.0643 S12: -0.0554 S13: -0.3989 REMARK 3 S21: 0.1117 S22: -0.0519 S23: -0.1574 REMARK 3 S31: 0.0418 S32: 0.1791 S33: -0.0099 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN E AND RESSEQ 1:120) REMARK 3 ORIGIN FOR THE GROUP (A): -13.2960 -69.6673 27.0273 REMARK 3 T TENSOR REMARK 3 T11: 0.5639 T22: 0.5410 REMARK 3 T33: 0.6440 T12: 0.0180 REMARK 3 T13: 0.1051 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 2.5231 L22: 2.7056 REMARK 3 L33: 2.5216 L12: -1.1108 REMARK 3 L13: -0.0276 L23: 0.3978 REMARK 3 S TENSOR REMARK 3 S11: -0.3674 S12: 0.2263 S13: 0.1282 REMARK 3 S21: -0.0216 S22: 0.3056 S23: -0.5424 REMARK 3 S31: -0.3302 S32: 0.3276 S33: 0.0466 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN F AND RESSEQ 1:121) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6046 -42.6421 21.0495 REMARK 3 T TENSOR REMARK 3 T11: 0.6027 T22: 0.4939 REMARK 3 T33: 0.6466 T12: -0.0129 REMARK 3 T13: 0.1167 T23: -0.0739 REMARK 3 L TENSOR REMARK 3 L11: 3.0020 L22: 3.1122 REMARK 3 L33: 1.4753 L12: -1.3524 REMARK 3 L13: 0.7669 L23: -0.4998 REMARK 3 S TENSOR REMARK 3 S11: -0.2805 S12: 0.3171 S13: 0.7049 REMARK 3 S21: -0.9581 S22: 0.0970 S23: -0.8162 REMARK 3 S31: -0.0800 S32: 0.2833 S33: 0.1716 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN G AND RESSEQ 1:120) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6600 -22.9405 20.4813 REMARK 3 T TENSOR REMARK 3 T11: 1.3770 T22: 1.1604 REMARK 3 T33: 1.6346 T12: 0.1410 REMARK 3 T13: -0.4687 T23: -0.1344 REMARK 3 L TENSOR REMARK 3 L11: 1.4484 L22: 1.5668 REMARK 3 L33: 1.0084 L12: -0.6486 REMARK 3 L13: -0.7820 L23: -0.6015 REMARK 3 S TENSOR REMARK 3 S11: 0.6123 S12: 0.6193 S13: -0.1141 REMARK 3 S21: -0.9773 S22: -0.1122 S23: 0.0488 REMARK 3 S31: 0.5624 S32: -0.3977 S33: -0.3370 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9NMZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAR-25. REMARK 100 THE DEPOSITION ID IS D_1000293693. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JAN-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92010 REMARK 200 MONOCHROMATOR : SI(111) DCM REMARK 200 OPTICS : KB BIMORPH MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12355 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.460 REMARK 200 RESOLUTION RANGE LOW (A) : 34.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 200 DATA REDUNDANCY : 12.50 REMARK 200 R MERGE (I) : 0.66800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.30 REMARK 200 R MERGE FOR SHELL (I) : 2.35400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM CITRATE DIBASIC, 20% REMARK 280 W/V PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 81.10450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.82570 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 65.66767 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 81.10450 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 46.82570 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 65.66767 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 81.10450 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 46.82570 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 65.66767 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 81.10450 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 46.82570 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 65.66767 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 81.10450 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 46.82570 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 65.66767 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 81.10450 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 46.82570 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 65.66767 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 93.65141 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 131.33533 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 93.65141 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 131.33533 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 93.65141 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 131.33533 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 93.65141 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 131.33533 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 93.65141 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 131.33533 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 93.65141 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 131.33533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -1 REMARK 465 GLY A 0 REMARK 465 PRO A 122 REMARK 465 ALA A 123 REMARK 465 GLY A 124 REMARK 465 SER A 125 REMARK 465 GLY A 126 REMARK 465 SER B -1 REMARK 465 GLY B 0 REMARK 465 SER B 125 REMARK 465 GLY B 126 REMARK 465 SER C -1 REMARK 465 GLY C 0 REMARK 465 ALA C 123 REMARK 465 GLY C 124 REMARK 465 SER C 125 REMARK 465 GLY C 126 REMARK 465 SER D -1 REMARK 465 GLY D 0 REMARK 465 PRO D 122 REMARK 465 ALA D 123 REMARK 465 GLY D 124 REMARK 465 SER D 125 REMARK 465 GLY D 126 REMARK 465 SER E -1 REMARK 465 GLY E 0 REMARK 465 ALA E 123 REMARK 465 GLY E 124 REMARK 465 SER E 125 REMARK 465 GLY E 126 REMARK 465 SER F -1 REMARK 465 GLY F 0 REMARK 465 GLY F 124 REMARK 465 SER F 125 REMARK 465 GLY F 126 REMARK 465 SER G -1 REMARK 465 GLY G 0 REMARK 465 LEU G 121 REMARK 465 PRO G 122 REMARK 465 ALA G 123 REMARK 465 GLY G 124 REMARK 465 SER G 125 REMARK 465 GLY G 126 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 100 ND2 REMARK 470 ASN B 100 ND2 REMARK 470 ASN C 100 ND2 REMARK 470 ASN D 100 ND2 REMARK 470 ASN E 100 ND2 REMARK 470 ASN F 100 ND2 REMARK 470 ASN G 100 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS E 9 CG ASN E 100 1.45 REMARK 500 NZ LYS F 9 CG ASN F 100 1.45 REMARK 500 NZ LYS B 9 CG ASN B 100 1.45 REMARK 500 NZ LYS C 9 CG ASN C 100 1.45 REMARK 500 NZ LYS D 9 CG ASN D 100 1.45 REMARK 500 NZ LYS G 9 CG ASN G 100 1.45 REMARK 500 NZ LYS A 9 CG ASN A 100 1.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 83 -88.13 -99.93 REMARK 500 ASP A 90 32.33 -99.97 REMARK 500 THR A 92 -41.65 -149.35 REMARK 500 THR A 119 -165.87 -76.36 REMARK 500 ASP B 13 62.25 -101.90 REMARK 500 SER B 30 -79.90 -95.55 REMARK 500 LYS B 50 57.64 35.82 REMARK 500 ASP B 83 -82.70 -85.20 REMARK 500 THR B 92 -37.59 -151.36 REMARK 500 ASP C 15 -32.81 -132.49 REMARK 500 THR C 92 -3.33 -150.46 REMARK 500 ASP C 105 108.96 -52.93 REMARK 500 ASP D 13 62.86 -106.77 REMARK 500 GLU D 51 -165.54 -112.23 REMARK 500 ASP D 83 -102.89 -100.34 REMARK 500 ASP D 105 104.10 -53.59 REMARK 500 ASP E 13 64.94 -100.56 REMARK 500 ASP E 83 -105.83 -100.38 REMARK 500 THR E 92 -25.84 -141.26 REMARK 500 THR E 103 -166.83 -101.54 REMARK 500 ASP F 13 75.57 -103.91 REMARK 500 ASP F 15 -45.22 -141.67 REMARK 500 ASN F 79 -0.43 66.51 REMARK 500 ASP F 90 22.12 -78.52 REMARK 500 THR F 92 -16.78 -155.29 REMARK 500 ASN G 8 78.45 -105.65 REMARK 500 ASP G 13 70.62 -158.98 REMARK 500 THR G 16 -122.37 -98.87 REMARK 500 ILE G 18 -25.33 -148.50 REMARK 500 SER G 30 -39.38 -146.28 REMARK 500 THR G 103 -108.92 -107.79 REMARK 500 REMARK 500 REMARK: NULL DBREF 9NMZ A -1 126 PDB 9NMZ 9NMZ -1 126 DBREF 9NMZ B -1 126 PDB 9NMZ 9NMZ -1 126 DBREF 9NMZ C -1 126 PDB 9NMZ 9NMZ -1 126 DBREF 9NMZ D -1 126 PDB 9NMZ 9NMZ -1 126 DBREF 9NMZ E -1 126 PDB 9NMZ 9NMZ -1 126 DBREF 9NMZ F -1 126 PDB 9NMZ 9NMZ -1 126 DBREF 9NMZ G -1 126 PDB 9NMZ 9NMZ -1 126 SEQRES 1 A 128 SER GLY LYS THR ILE ASN VAL THR VAL ASN LYS THR PHE SEQRES 2 A 128 TYR ASP GLY ASP THR GLU ILE TYR THR LYS THR PHE ASN SEQRES 3 A 128 ASP THR PHE THR PHE SER SER TYR GLY GLU THR LYS SER SEQRES 4 A 128 THR THR PHE THR ASP SER PHE THR ASP PRO THR THR LYS SEQRES 5 A 128 GLU THR ILE ASN TYR THR ILE THR VAL SER SER THR LEU SEQRES 6 A 128 LEU PRO GLY SER LEU VAL VAL THR VAL THR GLU THR VAL SEQRES 7 A 128 SER GLY ASN TYR LYS VAL ASP SER ILE THR ALA THR TYR SEQRES 8 A 128 ASP GLY THR ASN LEU THR ILE ASN ILE THR ASN LYS LYS SEQRES 9 A 128 THR ASP ASP PRO ASN PRO ASP THR LYS THR GLU THR PHE SEQRES 10 A 128 THR PHE PRO THR SER LEU PRO ALA GLY SER GLY SEQRES 1 B 128 SER GLY LYS THR ILE ASN VAL THR VAL ASN LYS THR PHE SEQRES 2 B 128 TYR ASP GLY ASP THR GLU ILE TYR THR LYS THR PHE ASN SEQRES 3 B 128 ASP THR PHE THR PHE SER SER TYR GLY GLU THR LYS SER SEQRES 4 B 128 THR THR PHE THR ASP SER PHE THR ASP PRO THR THR LYS SEQRES 5 B 128 GLU THR ILE ASN TYR THR ILE THR VAL SER SER THR LEU SEQRES 6 B 128 LEU PRO GLY SER LEU VAL VAL THR VAL THR GLU THR VAL SEQRES 7 B 128 SER GLY ASN TYR LYS VAL ASP SER ILE THR ALA THR TYR SEQRES 8 B 128 ASP GLY THR ASN LEU THR ILE ASN ILE THR ASN LYS LYS SEQRES 9 B 128 THR ASP ASP PRO ASN PRO ASP THR LYS THR GLU THR PHE SEQRES 10 B 128 THR PHE PRO THR SER LEU PRO ALA GLY SER GLY SEQRES 1 C 128 SER GLY LYS THR ILE ASN VAL THR VAL ASN LYS THR PHE SEQRES 2 C 128 TYR ASP GLY ASP THR GLU ILE TYR THR LYS THR PHE ASN SEQRES 3 C 128 ASP THR PHE THR PHE SER SER TYR GLY GLU THR LYS SER SEQRES 4 C 128 THR THR PHE THR ASP SER PHE THR ASP PRO THR THR LYS SEQRES 5 C 128 GLU THR ILE ASN TYR THR ILE THR VAL SER SER THR LEU SEQRES 6 C 128 LEU PRO GLY SER LEU VAL VAL THR VAL THR GLU THR VAL SEQRES 7 C 128 SER GLY ASN TYR LYS VAL ASP SER ILE THR ALA THR TYR SEQRES 8 C 128 ASP GLY THR ASN LEU THR ILE ASN ILE THR ASN LYS LYS SEQRES 9 C 128 THR ASP ASP PRO ASN PRO ASP THR LYS THR GLU THR PHE SEQRES 10 C 128 THR PHE PRO THR SER LEU PRO ALA GLY SER GLY SEQRES 1 D 128 SER GLY LYS THR ILE ASN VAL THR VAL ASN LYS THR PHE SEQRES 2 D 128 TYR ASP GLY ASP THR GLU ILE TYR THR LYS THR PHE ASN SEQRES 3 D 128 ASP THR PHE THR PHE SER SER TYR GLY GLU THR LYS SER SEQRES 4 D 128 THR THR PHE THR ASP SER PHE THR ASP PRO THR THR LYS SEQRES 5 D 128 GLU THR ILE ASN TYR THR ILE THR VAL SER SER THR LEU SEQRES 6 D 128 LEU PRO GLY SER LEU VAL VAL THR VAL THR GLU THR VAL SEQRES 7 D 128 SER GLY ASN TYR LYS VAL ASP SER ILE THR ALA THR TYR SEQRES 8 D 128 ASP GLY THR ASN LEU THR ILE ASN ILE THR ASN LYS LYS SEQRES 9 D 128 THR ASP ASP PRO ASN PRO ASP THR LYS THR GLU THR PHE SEQRES 10 D 128 THR PHE PRO THR SER LEU PRO ALA GLY SER GLY SEQRES 1 E 128 SER GLY LYS THR ILE ASN VAL THR VAL ASN LYS THR PHE SEQRES 2 E 128 TYR ASP GLY ASP THR GLU ILE TYR THR LYS THR PHE ASN SEQRES 3 E 128 ASP THR PHE THR PHE SER SER TYR GLY GLU THR LYS SER SEQRES 4 E 128 THR THR PHE THR ASP SER PHE THR ASP PRO THR THR LYS SEQRES 5 E 128 GLU THR ILE ASN TYR THR ILE THR VAL SER SER THR LEU SEQRES 6 E 128 LEU PRO GLY SER LEU VAL VAL THR VAL THR GLU THR VAL SEQRES 7 E 128 SER GLY ASN TYR LYS VAL ASP SER ILE THR ALA THR TYR SEQRES 8 E 128 ASP GLY THR ASN LEU THR ILE ASN ILE THR ASN LYS LYS SEQRES 9 E 128 THR ASP ASP PRO ASN PRO ASP THR LYS THR GLU THR PHE SEQRES 10 E 128 THR PHE PRO THR SER LEU PRO ALA GLY SER GLY SEQRES 1 F 128 SER GLY LYS THR ILE ASN VAL THR VAL ASN LYS THR PHE SEQRES 2 F 128 TYR ASP GLY ASP THR GLU ILE TYR THR LYS THR PHE ASN SEQRES 3 F 128 ASP THR PHE THR PHE SER SER TYR GLY GLU THR LYS SER SEQRES 4 F 128 THR THR PHE THR ASP SER PHE THR ASP PRO THR THR LYS SEQRES 5 F 128 GLU THR ILE ASN TYR THR ILE THR VAL SER SER THR LEU SEQRES 6 F 128 LEU PRO GLY SER LEU VAL VAL THR VAL THR GLU THR VAL SEQRES 7 F 128 SER GLY ASN TYR LYS VAL ASP SER ILE THR ALA THR TYR SEQRES 8 F 128 ASP GLY THR ASN LEU THR ILE ASN ILE THR ASN LYS LYS SEQRES 9 F 128 THR ASP ASP PRO ASN PRO ASP THR LYS THR GLU THR PHE SEQRES 10 F 128 THR PHE PRO THR SER LEU PRO ALA GLY SER GLY SEQRES 1 G 128 SER GLY LYS THR ILE ASN VAL THR VAL ASN LYS THR PHE SEQRES 2 G 128 TYR ASP GLY ASP THR GLU ILE TYR THR LYS THR PHE ASN SEQRES 3 G 128 ASP THR PHE THR PHE SER SER TYR GLY GLU THR LYS SER SEQRES 4 G 128 THR THR PHE THR ASP SER PHE THR ASP PRO THR THR LYS SEQRES 5 G 128 GLU THR ILE ASN TYR THR ILE THR VAL SER SER THR LEU SEQRES 6 G 128 LEU PRO GLY SER LEU VAL VAL THR VAL THR GLU THR VAL SEQRES 7 G 128 SER GLY ASN TYR LYS VAL ASP SER ILE THR ALA THR TYR SEQRES 8 G 128 ASP GLY THR ASN LEU THR ILE ASN ILE THR ASN LYS LYS SEQRES 9 G 128 THR ASP ASP PRO ASN PRO ASP THR LYS THR GLU THR PHE SEQRES 10 G 128 THR PHE PRO THR SER LEU PRO ALA GLY SER GLY FORMUL 8 HOH *5(H2 O) SHEET 1 AA1 4 GLU A 17 THR A 28 0 SHEET 2 AA1 4 THR A 2 TYR A 12 -1 N PHE A 11 O TYR A 19 SHEET 3 AA1 4 ASN A 93 LYS A 102 1 O LEU A 94 N ASN A 4 SHEET 4 AA1 4 TYR A 80 TYR A 89 -1 N ASP A 83 O THR A 99 SHEET 1 AA2 4 GLU A 34 THR A 45 0 SHEET 2 AA2 4 THR A 52 LEU A 64 -1 O ILE A 53 N PHE A 44 SHEET 3 AA2 4 SER A 67 THR A 75 -1 O VAL A 69 N THR A 62 SHEET 4 AA2 4 THR A 110 PRO A 118 -1 O PHE A 117 N LEU A 68 SHEET 1 AA3 4 THR B 16 THR B 28 0 SHEET 2 AA3 4 THR B 2 ASP B 13 -1 N LYS B 9 O LYS B 21 SHEET 3 AA3 4 ASN B 93 LYS B 102 1 O ILE B 96 N ASN B 8 SHEET 4 AA3 4 TYR B 80 TYR B 89 -1 N LYS B 81 O LYS B 101 SHEET 1 AA4 4 THR B 35 ASP B 46 0 SHEET 2 AA4 4 GLU B 51 LEU B 64 -1 O ILE B 57 N PHE B 40 SHEET 3 AA4 4 SER B 67 VAL B 76 -1 O THR B 73 N THR B 58 SHEET 4 AA4 4 ASP B 109 PRO B 118 -1 O PHE B 115 N VAL B 70 SHEET 1 AA5 4 THR C 16 THR C 28 0 SHEET 2 AA5 4 THR C 2 ASP C 13 -1 N PHE C 11 O TYR C 19 SHEET 3 AA5 4 ASN C 93 LYS C 102 1 O ASN C 100 N TYR C 12 SHEET 4 AA5 4 TYR C 80 TYR C 89 -1 N THR C 86 O ASN C 97 SHEET 1 AA6 4 THR C 35 ASP C 46 0 SHEET 2 AA6 4 GLU C 51 LEU C 64 -1 O ILE C 57 N PHE C 40 SHEET 3 AA6 4 SER C 67 VAL C 76 -1 O SER C 67 N LEU C 64 SHEET 4 AA6 4 ASP C 109 PRO C 118 -1 O PHE C 115 N VAL C 70 SHEET 1 AA7 4 THR D 16 THR D 28 0 SHEET 2 AA7 4 THR D 2 ASP D 13 -1 N PHE D 11 O ILE D 18 SHEET 3 AA7 4 ASN D 93 LYS D 102 1 O ILE D 96 N THR D 6 SHEET 4 AA7 4 TYR D 80 TYR D 89 -1 N THR D 88 O THR D 95 SHEET 1 AA8 4 THR D 35 PHE D 44 0 SHEET 2 AA8 4 ILE D 53 LEU D 64 -1 O ILE D 57 N PHE D 40 SHEET 3 AA8 4 SER D 67 VAL D 76 -1 O THR D 73 N THR D 58 SHEET 4 AA8 4 ASP D 109 PRO D 118 -1 O PHE D 117 N LEU D 68 SHEET 1 AA9 4 THR E 16 THR E 28 0 SHEET 2 AA9 4 THR E 2 ASP E 13 -1 N VAL E 5 O ASP E 25 SHEET 3 AA9 4 ASN E 93 LYS E 102 1 O LEU E 94 N ASN E 4 SHEET 4 AA9 4 TYR E 80 TYR E 89 -1 N THR E 86 O ASN E 97 SHEET 1 AB1 4 THR E 35 ASP E 46 0 SHEET 2 AB1 4 GLU E 51 LEU E 64 -1 O ILE E 57 N PHE E 40 SHEET 3 AB1 4 SER E 67 VAL E 76 -1 O THR E 71 N SER E 60 SHEET 4 AB1 4 ASP E 109 PRO E 118 -1 O PHE E 115 N VAL E 70 SHEET 1 AB2 4 THR F 16 THR F 28 0 SHEET 2 AB2 4 THR F 2 ASP F 13 -1 N PHE F 11 O TYR F 19 SHEET 3 AB2 4 ASN F 93 LYS F 102 1 O ASN F 100 N TYR F 12 SHEET 4 AB2 4 TYR F 80 TYR F 89 -1 N LYS F 81 O LYS F 101 SHEET 1 AB3 4 THR F 35 ASP F 46 0 SHEET 2 AB3 4 GLU F 51 LEU F 64 -1 O VAL F 59 N THR F 38 SHEET 3 AB3 4 SER F 67 VAL F 76 -1 O THR F 73 N THR F 58 SHEET 4 AB3 4 ASP F 109 PRO F 118 -1 O PHE F 115 N VAL F 70 SHEET 1 AB4 4 TYR G 19 THR G 28 0 SHEET 2 AB4 4 THR G 2 PHE G 11 -1 N ILE G 3 O PHE G 27 SHEET 3 AB4 4 ASN G 93 LYS G 102 1 O LEU G 94 N ASN G 4 SHEET 4 AB4 4 TYR G 80 TYR G 89 -1 N ASP G 83 O THR G 99 SHEET 1 AB5 4 THR G 35 THR G 45 0 SHEET 2 AB5 4 THR G 52 LEU G 64 -1 O ILE G 57 N PHE G 40 SHEET 3 AB5 4 SER G 67 VAL G 76 -1 O THR G 71 N SER G 60 SHEET 4 AB5 4 ASP G 109 PRO G 118 -1 O PHE G 115 N VAL G 70 CRYST1 162.209 162.209 197.003 90.00 90.00 120.00 H 3 2 126 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006165 0.003559 0.000000 0.00000 SCALE2 0.000000 0.007119 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005076 0.00000 MASTER 525 0 0 0 56 0 0 6 6619 7 0 70 END