HEADER TRANSFERASE 15-MAR-25 9NS2 TITLE STRUCTURE OF S. POMBE CC-ADDING ENZYME IN COMPLEX WITH PYROPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRNA NUCLEOTIDYLTRANSFERASE CCA1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CC-ADDING ENZYME CCA1,TRNA CYTIDYLTRANSFERASE CCA1; COMPND 5 EC: 2.7.7.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 3 ORGANISM_COMMON: FISSION YEAST; SOURCE 4 ORGANISM_TAXID: 4896; SOURCE 5 GENE: CCA1, SPAC1093.04C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMIDS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS CC-ADDING ENZYME, NUCLEOTIDYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.P.SIKKEMA,T.M.T.HALL REVDAT 1 13-MAY-26 9NS2 0 JRNL AUTH A.P.SIKKEMA,L.PERERA,T.M.T.HALL JRNL TITL ENZYME STRUCTURE AND KINETICS PRODUCE TRNA AND NUCLEOTIDE JRNL TITL 2 SPECIFICITY OF SCHIZOSACCHAROMYCES POMBE CC- AND A-ADDING JRNL TITL 3 ENZYMES JRNL REF NUCLEIC ACIDS RES. 2025 JRNL REFN ESSN 1362-4962 JRNL DOI 10.1093/NAR/GKAG475 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 90796 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.300 REMARK 3 FREE R VALUE TEST SET COUNT : 3901 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.5800 - 5.9000 0.98 3074 136 0.1673 0.2343 REMARK 3 2 5.9000 - 4.6900 1.00 3141 142 0.1691 0.2060 REMARK 3 3 4.6900 - 4.1000 1.00 3101 142 0.1408 0.1730 REMARK 3 4 4.1000 - 3.7300 1.00 3129 138 0.1515 0.2387 REMARK 3 5 3.7300 - 3.4600 1.00 3174 139 0.1710 0.1998 REMARK 3 6 3.4600 - 3.2500 1.00 3143 139 0.1723 0.2391 REMARK 3 7 3.2500 - 3.0900 1.00 3091 141 0.1728 0.2325 REMARK 3 8 3.0900 - 2.9600 1.00 3188 143 0.1787 0.1766 REMARK 3 9 2.9600 - 2.8400 1.00 3141 140 0.1741 0.2503 REMARK 3 10 2.8400 - 2.7500 1.00 3094 143 0.1821 0.2126 REMARK 3 11 2.7500 - 2.6600 1.00 3113 140 0.1845 0.2416 REMARK 3 12 2.6600 - 2.5800 1.00 3174 141 0.1845 0.2151 REMARK 3 13 2.5800 - 2.5200 1.00 3107 141 0.1882 0.2257 REMARK 3 14 2.5200 - 2.4500 1.00 3188 141 0.1886 0.2524 REMARK 3 15 2.4500 - 2.4000 1.00 3078 137 0.2043 0.2079 REMARK 3 16 2.4000 - 2.3500 1.00 3208 148 0.2135 0.2411 REMARK 3 17 2.3500 - 2.3000 1.00 3077 136 0.2113 0.2842 REMARK 3 18 2.3000 - 2.2600 1.00 3138 143 0.2212 0.2400 REMARK 3 19 2.2600 - 2.2200 1.00 3183 140 0.2494 0.3172 REMARK 3 20 2.2200 - 2.1800 1.00 3066 138 0.2550 0.2816 REMARK 3 21 2.1800 - 2.1400 1.00 3216 145 0.2572 0.3102 REMARK 3 22 2.1400 - 2.1100 1.00 3035 137 0.2700 0.2988 REMARK 3 23 2.1100 - 2.0800 1.00 3176 145 0.2932 0.2934 REMARK 3 24 2.0800 - 2.0500 1.00 3119 138 0.3003 0.3012 REMARK 3 25 2.0500 - 2.0200 1.00 3043 137 0.3235 0.3418 REMARK 3 26 2.0200 - 2.0000 0.99 3204 147 0.3428 0.3895 REMARK 3 27 2.0000 - 1.9700 0.93 2892 127 0.3883 0.4138 REMARK 3 28 1.9700 - 1.9500 0.83 2602 117 0.3967 0.4370 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.284 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.844 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.07 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3835 REMARK 3 ANGLE : 0.829 5181 REMARK 3 CHIRALITY : 0.051 584 REMARK 3 PLANARITY : 0.008 654 REMARK 3 DIHEDRAL : 17.581 1418 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 9:67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 69.164 33.897 8.024 REMARK 3 T TENSOR REMARK 3 T11: 0.2370 T22: 0.3594 REMARK 3 T33: 0.3200 T12: 0.0428 REMARK 3 T13: 0.0446 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 6.0442 L22: 3.4986 REMARK 3 L33: 1.7104 L12: -4.5700 REMARK 3 L13: 0.5604 L23: -0.4675 REMARK 3 S TENSOR REMARK 3 S11: 0.0327 S12: -0.0755 S13: 0.2632 REMARK 3 S21: 0.0497 S22: -0.0425 S23: -0.3056 REMARK 3 S31: -0.0677 S32: 0.0515 S33: 0.0074 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 68:156 ) REMARK 3 ORIGIN FOR THE GROUP (A): 66.483 30.942 13.602 REMARK 3 T TENSOR REMARK 3 T11: 0.3058 T22: 0.3377 REMARK 3 T33: 0.2865 T12: 0.0475 REMARK 3 T13: 0.0451 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 7.6777 L22: 4.5283 REMARK 3 L33: 2.0236 L12: -4.8275 REMARK 3 L13: 3.1598 L23: -1.6393 REMARK 3 S TENSOR REMARK 3 S11: -0.2459 S12: -0.4967 S13: -0.2999 REMARK 3 S21: 0.3417 S22: 0.2882 S23: 0.1977 REMARK 3 S31: 0.0522 S32: -0.2212 S33: -0.0352 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 157:219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.982 45.126 10.136 REMARK 3 T TENSOR REMARK 3 T11: 0.2383 T22: 0.2702 REMARK 3 T33: 0.3769 T12: 0.0744 REMARK 3 T13: -0.0469 T23: 0.0080 REMARK 3 L TENSOR REMARK 3 L11: 3.4302 L22: 2.0401 REMARK 3 L33: 3.9287 L12: -0.6130 REMARK 3 L13: -1.2974 L23: 1.1743 REMARK 3 S TENSOR REMARK 3 S11: 0.0198 S12: 0.1712 S13: -0.0391 REMARK 3 S21: 0.0399 S22: -0.0509 S23: 0.1268 REMARK 3 S31: 0.1798 S32: -0.0528 S33: 0.0260 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 220:307 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.533 53.175 29.668 REMARK 3 T TENSOR REMARK 3 T11: 0.3483 T22: 0.2747 REMARK 3 T33: 0.3060 T12: 0.0960 REMARK 3 T13: -0.0536 T23: 0.0185 REMARK 3 L TENSOR REMARK 3 L11: 2.7627 L22: 3.1582 REMARK 3 L33: 5.2174 L12: 0.6390 REMARK 3 L13: -0.0809 L23: -0.6565 REMARK 3 S TENSOR REMARK 3 S11: 0.0117 S12: -0.0825 S13: -0.2143 REMARK 3 S21: 0.3969 S22: -0.0486 S23: -0.1561 REMARK 3 S31: -0.0805 S32: -0.0709 S33: 0.0357 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 308:410 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.951 59.142 44.705 REMARK 3 T TENSOR REMARK 3 T11: 0.8345 T22: 0.3768 REMARK 3 T33: 0.3578 T12: 0.0299 REMARK 3 T13: -0.1426 T23: 0.0385 REMARK 3 L TENSOR REMARK 3 L11: 1.7110 L22: 1.8487 REMARK 3 L33: 4.0594 L12: 0.0012 REMARK 3 L13: 1.1342 L23: 0.6803 REMARK 3 S TENSOR REMARK 3 S11: -0.0308 S12: -0.3445 S13: 0.0466 REMARK 3 S21: 0.9499 S22: -0.0831 S23: -0.3041 REMARK 3 S31: -0.3382 S32: -0.0224 S33: 0.0757 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 411:449 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.514 68.086 51.708 REMARK 3 T TENSOR REMARK 3 T11: 1.1993 T22: 0.5341 REMARK 3 T33: 0.6784 T12: -0.1653 REMARK 3 T13: -0.3833 T23: 0.0305 REMARK 3 L TENSOR REMARK 3 L11: 2.6828 L22: 3.5036 REMARK 3 L33: 3.0006 L12: -0.9149 REMARK 3 L13: -0.9484 L23: -0.3784 REMARK 3 S TENSOR REMARK 3 S11: -0.1515 S12: 0.4871 S13: 0.3761 REMARK 3 S21: 0.7662 S22: -0.3281 S23: -0.9473 REMARK 3 S31: -0.9326 S32: 0.9408 S33: 0.3379 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 450:491 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.481 58.953 72.839 REMARK 3 T TENSOR REMARK 3 T11: 2.1127 T22: 0.5924 REMARK 3 T33: 0.6606 T12: 0.0314 REMARK 3 T13: -0.8033 T23: -0.1701 REMARK 3 L TENSOR REMARK 3 L11: 0.6470 L22: 0.5949 REMARK 3 L33: 1.6830 L12: 0.3753 REMARK 3 L13: 0.6273 L23: 0.9804 REMARK 3 S TENSOR REMARK 3 S11: -0.2171 S12: -0.3006 S13: 0.3889 REMARK 3 S21: 1.3190 S22: -0.1597 S23: -0.5764 REMARK 3 S31: -0.2439 S32: 0.2981 S33: -0.3293 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9NS2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAR-25. REMARK 100 THE DEPOSITION ID IS D_1000293819. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46482 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 49.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.770 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.53 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION (6.5 MG/ML IN 20 MM REMARK 280 TRIS PH 7.5, 50 MM NACL, 2MM CTP, 5MM MAGNESIUM CHLORIDE) WAS REMARK 280 MIXED 1.5:1 WITH WELL SOLUTION (11% W/V PEG 8000, 100 MM HEPES REMARK 280 PH 7.5, 7% V/V ETHYLENE GLYCOL). CYRO CONDITION WAS WELL REMARK 280 SOLUTION WITH 15% GLYCEROL ADDED, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 39.43250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.86800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 39.43250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.86800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -1 REMARK 465 ASN A 0 REMARK 465 ALA A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 ASN A 94 REMARK 465 PRO A 95 REMARK 465 LEU A 96 REMARK 465 LYS A 97 REMARK 465 SER A 98 REMARK 465 LYS A 99 REMARK 465 HIS A 121 REMARK 465 ASP A 122 REMARK 465 TYR A 123 REMARK 465 THR A 124 REMARK 465 ASN A 125 REMARK 465 SER A 126 REMARK 465 ASN A 127 REMARK 465 SER A 128 REMARK 465 SER A 129 REMARK 465 ASN A 130 REMARK 465 LYS A 131 REMARK 465 LEU A 132 REMARK 465 VAL A 133 REMARK 465 LEU A 415 REMARK 465 ASN A 416 REMARK 465 LYS A 417 REMARK 465 ASP A 418 REMARK 465 GLU A 419 REMARK 465 LYS A 492 REMARK 465 GLY A 493 REMARK 465 THR A 494 REMARK 465 SER A 495 REMARK 465 ALA A 496 REMARK 465 VAL A 497 REMARK 465 VAL A 498 REMARK 465 ASP A 499 REMARK 465 SER A 500 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 87 CG CD CE NZ REMARK 470 HIS A 100 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 119 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 120 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 143 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 271 CG CD CE NZ REMARK 470 LYS A 296 CG CD CE NZ REMARK 470 LYS A 297 CG CD CE NZ REMARK 470 LYS A 329 CG CD CE NZ REMARK 470 LYS A 331 CG CD CE NZ REMARK 470 LYS A 348 CG CD CE NZ REMARK 470 LYS A 373 CG CD CE NZ REMARK 470 LYS A 376 CG CD CE NZ REMARK 470 ARG A 414 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 420 CG CD OE1 OE2 REMARK 470 ARG A 458 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 482 CG CD CE NZ REMARK 470 ILE A 488 CG1 CG2 CD1 REMARK 470 GLU A 491 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 226 -59.82 -130.44 REMARK 500 ASN A 245 93.87 -66.20 REMARK 500 ASN A 245 89.36 -68.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 929 DISTANCE = 6.43 ANGSTROMS DBREF 9NS2 A 2 500 UNP Q9UTQ0 CCA1_SCHPO 2 500 SEQADV 9NS2 SER A -1 UNP Q9UTQ0 EXPRESSION TAG SEQADV 9NS2 ASN A 0 UNP Q9UTQ0 EXPRESSION TAG SEQADV 9NS2 ALA A 1 UNP Q9UTQ0 EXPRESSION TAG SEQRES 1 A 502 SER ASN ALA ALA SER SER SER SER ILE LEU GLU LEU ASN SEQRES 2 A 502 GLU THR GLU LYS GLU LEU SER ASP ILE PHE LEU ASN VAL SEQRES 3 A 502 SER LYS LYS ILE GLY GLN MET ASP ARG LYS GLU PRO GLU SEQRES 4 A 502 VAL ARG PHE ALA GLY GLY TRP VAL ARG ASP LYS LEU LEU SEQRES 5 A 502 ARG ILE GLU SER HIS ASP ILE ASP VAL ALA ILE ASP CYS SEQRES 6 A 502 MET SER GLY PHE GLU PHE ALA GLN HIS LEU GLN SER TYR SEQRES 7 A 502 LEU ALA GLN GLN HIS PRO ASP TRP GLU THR LYS VAL ILE SEQRES 8 A 502 LYS ILE ASP ALA ASN PRO LEU LYS SER LYS HIS LEU GLU SEQRES 9 A 502 THR ALA THR ALA ARG ILE MET GLY MET ASP ILE ASP ILE SEQRES 10 A 502 VAL ASN LEU ARG HIS HIS ASP TYR THR ASN SER ASN SER SEQRES 11 A 502 SER ASN LYS LEU VAL PHE GLY THR PRO LEU GLU ASP ALA SEQRES 12 A 502 LEU ARG ARG ASP ALA THR ILE ASN ALA LEU PHE TYR ASN SEQRES 13 A 502 LEU LYS SER LYS THR VAL GLU ASP PHE THR GLY LYS GLY SEQRES 14 A 502 LEU VAL ASP LEU SER ASN LYS ILE ILE ARG THR PRO LEU SEQRES 15 A 502 VAL ALA ASP GLU THR PHE GLY ASP ASP PRO LEU ARG ALA SEQRES 16 A 502 VAL ARG CYS ILE ARG PHE ALA THR LYS TYR ASP PHE ASN SEQRES 17 A 502 ILE HIS GLU GLU THR ILE LYS GLY LEU LYS ASN PRO GLU SEQRES 18 A 502 LEU HIS GLU ARG LEU ARG SER SER ILE SER ARG GLU ARG SEQRES 19 A 502 ILE GLY VAL GLU VAL ASP LYS MET LEU LYS HIS CYS ASN SEQRES 20 A 502 THR ASN ARG ALA LEU LYS ILE ILE HIS SER LEU GLY MET SEQRES 21 A 502 PHE ALA CYS ILE PHE GLY PRO LEU GLU ILE HIS THR LYS SEQRES 22 A 502 LYS LEU GLN SER LYS ASN ILE GLU SER LEU SER LEU ILE SEQRES 23 A 502 PRO TYR ALA ILE ASP LEU PHE GLY TYR LEU GLN LYS LYS SEQRES 24 A 502 ASP VAL SER ILE LYS ASN LEU SER SER SER SER LYS TYR SEQRES 25 A 502 ILE PHE TRP LEU ALA ILE ALA THR LEU PRO TRP TYR ASN SEQRES 26 A 502 TRP SER ILE LEU GLU LYS SER LYS ILE LYS ILE LEU PRO SEQRES 27 A 502 PRO ILE LEU ILE ARG ASP SER LEU LYS TYR SER LYS PRO SEQRES 28 A 502 ILE MET SER GLN VAL GLU ASN PHE PHE VAL HIS TYR PRO SEQRES 29 A 502 LEU ILE MET SER LYS ILE ASN VAL LEU GLU LYS GLU GLY SEQRES 30 A 502 LYS LEU THR ARG LEU GLY CYS GLY ARG LEU VAL ARG GLU SEQRES 31 A 502 LEU GLY PRO HIS TRP ARG ASP ILE ILE ASP TRP ALA PHE SEQRES 32 A 502 PHE MET ASN THR LEU ILE SER ASN SER ASP ILE GLN ARG SEQRES 33 A 502 LEU ASN LYS ASP GLU GLU VAL THR TRP PHE HIS VAL LEU SEQRES 34 A 502 VAL LYS HIS ILE GLU GLU TYR GLY MET GLU GLU ALA TYR SEQRES 35 A 502 ASN ILE GLN PRO ILE ILE ASN GLY ASN GLU ILE THR ARG SEQRES 36 A 502 ILE LEU GLY ILE ARG PRO GLY PRO HIS LEU ARG LYS MET SEQRES 37 A 502 LEU ASP ASP SER ILE GLU TRP ARG ILE GLN ASN PRO GLU SEQRES 38 A 502 SER THR LYS GLU ASP TYR ILE ALA ILE MET LEU GLU LYS SEQRES 39 A 502 GLY THR SER ALA VAL VAL ASP SER HET EDO A 601 4 HET EDO A 602 4 HET EDO A 603 4 HET EDO A 604 4 HET EDO A 605 4 HET EDO A 606 4 HET EDO A 607 4 HET GOL A 608 6 HET GOL A 609 6 HET GOL A 610 6 HET GOL A 611 6 HET POP A 612 9 HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETNAM POP PYROPHOSPHATE 2- HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 EDO 7(C2 H6 O2) FORMUL 9 GOL 4(C3 H8 O3) FORMUL 13 POP H2 O7 P2 2- FORMUL 14 HOH *229(H2 O) HELIX 1 AA1 ASN A 11 GLN A 30 1 20 HELIX 2 AA2 GLY A 42 LEU A 50 1 9 HELIX 3 AA3 SER A 65 HIS A 81 1 17 HELIX 4 AA4 THR A 136 ARG A 143 1 8 HELIX 5 AA5 ALA A 146 ALA A 150 5 5 HELIX 6 AA6 LYS A 166 LYS A 174 1 9 HELIX 7 AA7 VAL A 181 ASP A 189 1 9 HELIX 8 AA8 PRO A 190 ASP A 204 1 15 HELIX 9 AA9 HIS A 208 LYS A 216 1 9 HELIX 10 AB1 ASN A 217 SER A 226 1 10 HELIX 11 AB2 SER A 229 CYS A 244 1 16 HELIX 12 AB3 ASN A 245 LEU A 256 1 12 HELIX 13 AB4 MET A 258 GLY A 264 1 7 HELIX 14 AB5 LEU A 266 LYS A 271 1 6 HELIX 15 AB6 ILE A 278 ILE A 284 5 7 HELIX 16 AB7 PRO A 285 ASP A 298 1 14 HELIX 17 AB8 ASP A 298 ASN A 303 1 6 HELIX 18 AB9 SER A 305 LEU A 319 1 15 HELIX 19 AC1 PRO A 320 TYR A 322 5 3 HELIX 20 AC2 LEU A 335 SER A 343 1 9 HELIX 21 AC3 SER A 347 HIS A 360 1 14 HELIX 22 AC4 HIS A 360 GLY A 375 1 16 HELIX 23 AC5 THR A 378 GLY A 390 1 13 HELIX 24 AC6 HIS A 392 ASN A 409 1 18 HELIX 25 AC7 THR A 422 TYR A 434 1 13 HELIX 26 AC8 GLU A 438 ILE A 442 5 5 HELIX 27 AC9 ASN A 447 GLY A 456 1 10 HELIX 28 AD1 GLY A 460 ASN A 477 1 18 HELIX 29 AD2 THR A 481 GLU A 491 1 11 SHEET 1 AA1 7 LYS A 87 ILE A 91 0 SHEET 2 AA1 7 THR A 103 ILE A 108 -1 O THR A 103 N ILE A 91 SHEET 3 AA1 7 MET A 111 ASN A 117 -1 O ILE A 115 N ALA A 104 SHEET 4 AA1 7 ASP A 56 ILE A 61 1 N VAL A 59 O ASP A 114 SHEET 5 AA1 7 VAL A 38 ALA A 41 -1 N ALA A 41 O ASP A 58 SHEET 6 AA1 7 PHE A 152 ASN A 154 -1 O TYR A 153 N PHE A 40 SHEET 7 AA1 7 THR A 159 GLU A 161 -1 O THR A 159 N ASN A 154 SHEET 1 AA2 2 ILE A 175 ILE A 176 0 SHEET 2 AA2 2 ASN A 206 ILE A 207 1 O ASN A 206 N ILE A 176 SHEET 1 AA3 3 LEU A 273 SER A 275 0 SHEET 2 AA3 3 SER A 325 GLU A 328 -1 O SER A 325 N GLN A 274 SHEET 3 AA3 3 LYS A 331 ILE A 334 -1 O LYS A 333 N ILE A 326 CISPEP 1 ILE A 284 PRO A 285 0 7.97 CRYST1 78.865 69.736 118.659 90.00 96.56 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012680 0.000000 0.001459 0.00000 SCALE2 0.000000 0.014340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008483 0.00000 CONECT 3708 3709 3710 CONECT 3709 3708 CONECT 3710 3708 3711 CONECT 3711 3710 CONECT 3712 3713 3714 CONECT 3713 3712 CONECT 3714 3712 3715 CONECT 3715 3714 CONECT 3716 3717 3718 CONECT 3717 3716 CONECT 3718 3716 3719 CONECT 3719 3718 CONECT 3720 3721 3722 CONECT 3721 3720 CONECT 3722 3720 3723 CONECT 3723 3722 CONECT 3724 3725 3726 CONECT 3725 3724 CONECT 3726 3724 3727 CONECT 3727 3726 CONECT 3728 3729 3730 CONECT 3729 3728 CONECT 3730 3728 3731 CONECT 3731 3730 CONECT 3732 3733 3734 CONECT 3733 3732 CONECT 3734 3732 3735 CONECT 3735 3734 CONECT 3736 3737 3738 CONECT 3737 3736 CONECT 3738 3736 3739 3740 CONECT 3739 3738 CONECT 3740 3738 3741 CONECT 3741 3740 CONECT 3742 3743 3744 CONECT 3743 3742 CONECT 3744 3742 3745 3746 CONECT 3745 3744 CONECT 3746 3744 3747 CONECT 3747 3746 CONECT 3748 3749 3750 CONECT 3749 3748 CONECT 3750 3748 3751 3752 CONECT 3751 3750 CONECT 3752 3750 3753 CONECT 3753 3752 CONECT 3754 3755 3756 CONECT 3755 3754 CONECT 3756 3754 3757 3758 CONECT 3757 3756 CONECT 3758 3756 3759 CONECT 3759 3758 CONECT 3760 3761 3762 3763 3764 CONECT 3761 3760 CONECT 3762 3760 CONECT 3763 3760 CONECT 3764 3760 3765 CONECT 3765 3764 3766 3767 3768 CONECT 3766 3765 CONECT 3767 3765 CONECT 3768 3765 MASTER 431 0 12 29 12 0 0 6 3968 1 61 39 END