HEADER RNA BINDING PROTEIN/DNA/RNA 01-APR-25 9NZP TITLE CRYO-EM STRUCTURE OF RHCAS12F-GRNA-DNA TERNARY COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: IS200/IS605 FAMILY ELEMENT TRANSPOSASE ACCESSORY PROTEIN COMPND 3 TNPB; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TARGET STRAND DNA; COMPND 8 CHAIN: C; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: NON-TARGET STRAND DNA; COMPND 12 CHAIN: D; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: GUIDE RNA; COMPND 16 CHAIN: E; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RUMINICLOSTRIDIUM HERBIFERMENTANS; SOURCE 3 ORGANISM_TAXID: 2488810; SOURCE 4 GENE: TNPB, EHE19_018105; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: RUMINICLOSTRIDIUM HERBIFERMENTANS; SOURCE 10 ORGANISM_TAXID: 2488810; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: RUMINICLOSTRIDIUM HERBIFERMENTANS; SOURCE 14 ORGANISM_TAXID: 2488810; SOURCE 15 MOL_ID: 4; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: RUMINICLOSTRIDIUM HERBIFERMENTANS; SOURCE 18 ORGANISM_TAXID: 2488810 KEYWDS RNA-GUIDED DNA ENDONUCLEASE, RNA BINDING PROTEIN, RNA BINDING KEYWDS 2 PROTEIN-DNA-RNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR K.GUAN,R.F.OCAMPO,D.W.TAYLOR REVDAT 1 08-APR-26 9NZP 0 JRNL AUTH K.GUAN,R.F.OCAMPO,D.W.TAYLOR JRNL TITL CRYO-EM STRUCTURE OF CRISPR-CAS12F NUCLEASES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.070 REMARK 3 NUMBER OF PARTICLES : 316144 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9NZP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-APR-25. REMARK 100 THE DEPOSITION ID IS D_1000293901. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : RHCAS12F-GRNA-DNA TERNARY REMARK 245 COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 8000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 196 REMARK 465 ILE A 197 REMARK 465 PRO A 198 REMARK 465 ASN A 199 REMARK 465 GLU A 200 REMARK 465 VAL A 201 REMARK 465 VAL A 202 REMARK 465 LYS A 203 REMARK 465 GLY A 204 REMARK 465 ARG A 205 REMARK 465 ILE A 206 REMARK 465 VAL A 207 REMARK 465 GLY A 208 REMARK 465 VAL A 209 REMARK 465 ASP A 210 REMARK 465 LEU A 211 REMARK 465 GLY A 212 REMARK 465 MET A 213 REMARK 465 LYS A 214 REMARK 465 ILE A 215 REMARK 465 PRO A 216 REMARK 465 ALA A 217 REMARK 465 TYR A 218 REMARK 465 VAL A 219 REMARK 465 THR A 220 REMARK 465 LEU A 221 REMARK 465 ASN A 222 REMARK 465 ASP A 223 REMARK 465 SER A 224 REMARK 465 GLU A 225 REMARK 465 TYR A 226 REMARK 465 ILE A 227 REMARK 465 GLY A 228 REMARK 465 LYS A 229 REMARK 465 PRO A 230 REMARK 465 ILE A 231 REMARK 465 GLY A 232 REMARK 465 ASP A 233 REMARK 465 ILE A 234 REMARK 465 ASN A 235 REMARK 465 ASP A 236 REMARK 465 PHE A 237 REMARK 465 LEU A 238 REMARK 465 LYS A 239 REMARK 465 VAL A 240 REMARK 465 ARG A 241 REMARK 465 LYS A 242 REMARK 465 GLN A 243 REMARK 465 PHE A 244 REMARK 465 LYS A 245 REMARK 465 GLU A 246 REMARK 465 ARG A 247 REMARK 465 LYS A 248 REMARK 465 GLU A 249 REMARK 465 ARG A 250 REMARK 465 LEU A 251 REMARK 465 GLN A 252 REMARK 465 LYS A 253 REMARK 465 GLN A 254 REMARK 465 LEU A 255 REMARK 465 ALA A 256 REMARK 465 ILE A 257 REMARK 465 ASN A 258 REMARK 465 LYS A 259 REMARK 465 GLY A 260 REMARK 465 GLY A 261 REMARK 465 ARG A 262 REMARK 465 GLY A 263 REMARK 465 ILE A 264 REMARK 465 THR A 265 REMARK 465 ASN A 266 REMARK 465 LYS A 267 REMARK 465 MET A 268 REMARK 465 GLN A 269 REMARK 465 LEU A 270 REMARK 465 MET A 271 REMARK 465 ASP A 272 REMARK 465 ALA A 273 REMARK 465 PHE A 274 REMARK 465 THR A 275 REMARK 465 ASN A 276 REMARK 465 LYS A 277 REMARK 465 GLU A 278 REMARK 465 LYS A 279 REMARK 465 ASN A 280 REMARK 465 PHE A 281 REMARK 465 ALA A 282 REMARK 465 ASN A 283 REMARK 465 THR A 284 REMARK 465 TYR A 285 REMARK 465 ASN A 286 REMARK 465 HIS A 287 REMARK 465 GLY A 288 REMARK 465 VAL A 289 REMARK 465 SER A 290 REMARK 465 LYS A 291 REMARK 465 ALA A 292 REMARK 465 ILE A 293 REMARK 465 ILE A 294 REMARK 465 ASN A 295 REMARK 465 PHE A 296 REMARK 465 ALA A 297 REMARK 465 LYS A 298 REMARK 465 LYS A 299 REMARK 465 TYR A 300 REMARK 465 LYS A 301 REMARK 465 ALA A 302 REMARK 465 GLU A 303 REMARK 465 GLN A 304 REMARK 465 ILE A 305 REMARK 465 ASN A 306 REMARK 465 VAL A 307 REMARK 465 GLU A 308 REMARK 465 PHE A 309 REMARK 465 LEU A 310 REMARK 465 ALA A 311 REMARK 465 LEU A 312 REMARK 465 ALA A 313 REMARK 465 GLY A 314 REMARK 465 SER A 315 REMARK 465 GLU A 316 REMARK 465 LYS A 317 REMARK 465 GLU A 318 REMARK 465 ILE A 319 REMARK 465 LEU A 320 REMARK 465 SER A 321 REMARK 465 SER A 322 REMARK 465 THR A 323 REMARK 465 ILE A 324 REMARK 465 ARG A 325 REMARK 465 TYR A 326 REMARK 465 TRP A 327 REMARK 465 SER A 328 REMARK 465 TYR A 329 REMARK 465 TYR A 330 REMARK 465 GLN A 331 REMARK 465 LEU A 332 REMARK 465 GLN A 333 REMARK 465 GLN A 334 REMARK 465 MET A 335 REMARK 465 ILE A 336 REMARK 465 GLU A 337 REMARK 465 TYR A 338 REMARK 465 LYS A 339 REMARK 465 ALA A 340 REMARK 465 ASN A 341 REMARK 465 ARG A 342 REMARK 465 GLU A 343 REMARK 465 GLY A 344 REMARK 465 ILE A 345 REMARK 465 ALA A 346 REMARK 465 VAL A 347 REMARK 465 LYS A 348 REMARK 465 TYR A 349 REMARK 465 VAL A 350 REMARK 465 ASP A 351 REMARK 465 PRO A 352 REMARK 465 TYR A 353 REMARK 465 LEU A 354 REMARK 465 THR A 355 REMARK 465 SER A 356 REMARK 465 GLN A 357 REMARK 465 THR A 358 REMARK 465 CYS A 359 REMARK 465 CYS A 360 REMARK 465 LYS A 361 REMARK 465 CYS A 362 REMARK 465 GLY A 363 REMARK 465 ASN A 364 REMARK 465 TYR A 365 REMARK 465 GLU A 366 REMARK 465 VAL A 367 REMARK 465 GLY A 368 REMARK 465 GLN A 369 REMARK 465 ARG A 370 REMARK 465 ILE A 371 REMARK 465 ASN A 372 REMARK 465 GLN A 373 REMARK 465 GLU A 374 REMARK 465 LEU A 375 REMARK 465 PHE A 376 REMARK 465 GLU A 377 REMARK 465 CYS A 378 REMARK 465 LYS A 379 REMARK 465 LEU A 380 REMARK 465 CYS A 381 REMARK 465 GLY A 382 REMARK 465 ASN A 383 REMARK 465 LYS A 384 REMARK 465 MET A 385 REMARK 465 ASN A 386 REMARK 465 ALA A 387 REMARK 465 ASP A 388 REMARK 465 ARG A 389 REMARK 465 ASN A 390 REMARK 465 ALA A 391 REMARK 465 SER A 392 REMARK 465 PHE A 393 REMARK 465 ASN A 394 REMARK 465 ILE A 395 REMARK 465 ALA A 396 REMARK 465 ARG A 397 REMARK 465 SER A 398 REMARK 465 THR A 399 REMARK 465 LYS A 400 REMARK 465 TYR A 401 REMARK 465 ILE A 402 REMARK 465 SER A 403 REMARK 465 SER A 404 REMARK 465 LYS A 405 REMARK 465 GLU A 406 REMARK 465 GLU A 407 REMARK 465 SER A 408 REMARK 465 ASP A 409 REMARK 465 PHE A 410 REMARK 465 TYR A 411 REMARK 465 LYS A 412 REMARK 465 GLN A 413 REMARK 465 LEU A 414 REMARK 465 LYS A 415 REMARK 465 ASP B 195 REMARK 465 ASN B 196 REMARK 465 ILE B 197 REMARK 465 PRO B 198 REMARK 465 ASN B 199 REMARK 465 GLU B 200 REMARK 465 VAL B 201 REMARK 465 VAL B 202 REMARK 465 LYS B 203 REMARK 465 GLY B 204 REMARK 465 ARG B 205 REMARK 465 ILE B 206 REMARK 465 VAL B 207 REMARK 465 GLY B 208 REMARK 465 VAL B 209 REMARK 465 ASP B 210 REMARK 465 LEU B 211 REMARK 465 GLY B 212 REMARK 465 MET B 213 REMARK 465 LYS B 214 REMARK 465 ILE B 215 REMARK 465 PRO B 216 REMARK 465 ALA B 217 REMARK 465 TYR B 218 REMARK 465 VAL B 219 REMARK 465 THR B 220 REMARK 465 LEU B 221 REMARK 465 ASN B 222 REMARK 465 ASP B 223 REMARK 465 SER B 224 REMARK 465 GLU B 225 REMARK 465 TYR B 226 REMARK 465 ILE B 227 REMARK 465 GLY B 228 REMARK 465 LYS B 229 REMARK 465 PRO B 230 REMARK 465 ILE B 231 REMARK 465 GLY B 232 REMARK 465 ASP B 233 REMARK 465 ILE B 234 REMARK 465 ASN B 235 REMARK 465 ASP B 236 REMARK 465 PHE B 237 REMARK 465 LEU B 238 REMARK 465 LYS B 239 REMARK 465 VAL B 240 REMARK 465 ARG B 241 REMARK 465 LYS B 242 REMARK 465 GLN B 243 REMARK 465 PHE B 244 REMARK 465 LYS B 245 REMARK 465 GLU B 246 REMARK 465 ARG B 247 REMARK 465 LYS B 248 REMARK 465 GLU B 249 REMARK 465 ARG B 250 REMARK 465 LEU B 251 REMARK 465 GLN B 252 REMARK 465 LYS B 253 REMARK 465 GLN B 254 REMARK 465 LEU B 255 REMARK 465 ALA B 256 REMARK 465 ILE B 257 REMARK 465 ASN B 258 REMARK 465 LYS B 259 REMARK 465 GLY B 260 REMARK 465 GLY B 261 REMARK 465 ARG B 262 REMARK 465 GLY B 263 REMARK 465 ILE B 264 REMARK 465 THR B 265 REMARK 465 ASN B 266 REMARK 465 LYS B 267 REMARK 465 MET B 268 REMARK 465 GLN B 269 REMARK 465 LEU B 270 REMARK 465 MET B 271 REMARK 465 ASP B 272 REMARK 465 ALA B 273 REMARK 465 PHE B 274 REMARK 465 THR B 275 REMARK 465 ASN B 276 REMARK 465 LYS B 277 REMARK 465 GLU B 278 REMARK 465 LYS B 279 REMARK 465 ASN B 280 REMARK 465 PHE B 281 REMARK 465 ALA B 282 REMARK 465 ASN B 283 REMARK 465 THR B 284 REMARK 465 TYR B 285 REMARK 465 ASN B 286 REMARK 465 HIS B 287 REMARK 465 GLY B 288 REMARK 465 VAL B 289 REMARK 465 SER B 290 REMARK 465 LYS B 291 REMARK 465 ALA B 292 REMARK 465 ILE B 293 REMARK 465 ILE B 294 REMARK 465 ASN B 295 REMARK 465 PHE B 296 REMARK 465 ALA B 297 REMARK 465 LYS B 298 REMARK 465 LYS B 299 REMARK 465 TYR B 300 REMARK 465 LYS B 301 REMARK 465 ALA B 302 REMARK 465 GLU B 303 REMARK 465 GLN B 304 REMARK 465 ILE B 305 REMARK 465 ASN B 306 REMARK 465 VAL B 307 REMARK 465 GLU B 308 REMARK 465 PHE B 309 REMARK 465 LEU B 310 REMARK 465 ALA B 311 REMARK 465 LEU B 312 REMARK 465 ALA B 313 REMARK 465 GLY B 314 REMARK 465 SER B 315 REMARK 465 GLU B 316 REMARK 465 LYS B 317 REMARK 465 GLU B 318 REMARK 465 ILE B 319 REMARK 465 LEU B 320 REMARK 465 SER B 321 REMARK 465 SER B 322 REMARK 465 THR B 323 REMARK 465 ILE B 324 REMARK 465 ARG B 325 REMARK 465 TYR B 326 REMARK 465 TRP B 327 REMARK 465 SER B 328 REMARK 465 TYR B 329 REMARK 465 TYR B 330 REMARK 465 GLN B 331 REMARK 465 LEU B 332 REMARK 465 GLN B 333 REMARK 465 GLN B 334 REMARK 465 MET B 335 REMARK 465 ILE B 336 REMARK 465 GLU B 337 REMARK 465 TYR B 338 REMARK 465 LYS B 339 REMARK 465 ALA B 340 REMARK 465 ASN B 341 REMARK 465 ARG B 342 REMARK 465 GLU B 343 REMARK 465 GLY B 344 REMARK 465 ILE B 345 REMARK 465 ALA B 346 REMARK 465 VAL B 347 REMARK 465 LYS B 348 REMARK 465 TYR B 349 REMARK 465 VAL B 350 REMARK 465 ASP B 351 REMARK 465 PRO B 352 REMARK 465 TYR B 353 REMARK 465 LEU B 354 REMARK 465 THR B 355 REMARK 465 SER B 356 REMARK 465 GLN B 357 REMARK 465 THR B 358 REMARK 465 CYS B 359 REMARK 465 CYS B 360 REMARK 465 LYS B 361 REMARK 465 CYS B 362 REMARK 465 GLY B 363 REMARK 465 ASN B 364 REMARK 465 TYR B 365 REMARK 465 GLU B 366 REMARK 465 VAL B 367 REMARK 465 GLY B 368 REMARK 465 GLN B 369 REMARK 465 ARG B 370 REMARK 465 ILE B 371 REMARK 465 ASN B 372 REMARK 465 GLN B 373 REMARK 465 GLU B 374 REMARK 465 LEU B 375 REMARK 465 PHE B 376 REMARK 465 GLU B 377 REMARK 465 CYS B 378 REMARK 465 LYS B 379 REMARK 465 LEU B 380 REMARK 465 CYS B 381 REMARK 465 GLY B 382 REMARK 465 ASN B 383 REMARK 465 LYS B 384 REMARK 465 MET B 385 REMARK 465 ASN B 386 REMARK 465 ALA B 387 REMARK 465 ASP B 388 REMARK 465 ARG B 389 REMARK 465 ASN B 390 REMARK 465 ALA B 391 REMARK 465 SER B 392 REMARK 465 PHE B 393 REMARK 465 ASN B 394 REMARK 465 ILE B 395 REMARK 465 ALA B 396 REMARK 465 ARG B 397 REMARK 465 SER B 398 REMARK 465 THR B 399 REMARK 465 LYS B 400 REMARK 465 TYR B 401 REMARK 465 ILE B 402 REMARK 465 SER B 403 REMARK 465 SER B 404 REMARK 465 LYS B 405 REMARK 465 GLU B 406 REMARK 465 GLU B 407 REMARK 465 SER B 408 REMARK 465 ASP B 409 REMARK 465 PHE B 410 REMARK 465 TYR B 411 REMARK 465 LYS B 412 REMARK 465 GLN B 413 REMARK 465 LEU B 414 REMARK 465 LYS B 415 REMARK 465 DA C -5 REMARK 465 DA C -4 REMARK 465 DT C -3 REMARK 465 DT C -2 REMARK 465 DC C -1 REMARK 465 DC C 0 REMARK 465 DA C 1 REMARK 465 DC C 2 REMARK 465 DT C 3 REMARK 465 DG C 4 REMARK 465 DA C 5 REMARK 465 DG C 6 REMARK 465 DG C 7 REMARK 465 DA C 8 REMARK 465 DA C 39 REMARK 465 DT D -1 REMARK 465 DC D 10 REMARK 465 DC D 11 REMARK 465 DT D 12 REMARK 465 DG D 13 REMARK 465 DC D 14 REMARK 465 DA D 15 REMARK 465 DT D 16 REMARK 465 DG D 17 REMARK 465 DG D 18 REMARK 465 DT D 19 REMARK 465 DG D 20 REMARK 465 DA D 21 REMARK 465 DT D 22 REMARK 465 DG D 23 REMARK 465 DT D 24 REMARK 465 DT D 25 REMARK 465 DG D 26 REMARK 465 DG D 27 REMARK 465 DA D 28 REMARK 465 DG D 29 REMARK 465 DT D 30 REMARK 465 DC D 31 REMARK 465 DC D 32 REMARK 465 DT D 33 REMARK 465 DC D 34 REMARK 465 DA D 35 REMARK 465 DG D 36 REMARK 465 DT D 37 REMARK 465 DG D 38 REMARK 465 DG D 39 REMARK 465 DA D 40 REMARK 465 DA D 41 REMARK 465 DT D 42 REMARK 465 DT D 43 REMARK 465 A E 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 127 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 DC C 12 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC C 20 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DG C 28 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 U E 9 C3' - O3' - P ANGL. DEV. = 7.5 DEGREES REMARK 500 U E 10 C5 - C6 - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 C E 17 C6 - N1 - C2 ANGL. DEV. = -3.3 DEGREES REMARK 500 G E 19 O4' - C1' - N9 ANGL. DEV. = 4.4 DEGREES REMARK 500 G E 29 N7 - C8 - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 G E 49 O3' - P - OP1 ANGL. DEV. = 7.5 DEGREES REMARK 500 U E 55 C1' - O4' - C4' ANGL. DEV. = -4.2 DEGREES REMARK 500 C E 93 C2 - N1 - C1' ANGL. DEV. = 7.9 DEGREES REMARK 500 C E 110 N1 - C2 - O2 ANGL. DEV. = 3.7 DEGREES REMARK 500 G E 135 C3' - O3' - P ANGL. DEV. = 7.4 DEGREES REMARK 500 A E 137 O4' - C1' - N9 ANGL. DEV. = 4.8 DEGREES REMARK 500 A E 137 C2 - N3 - C4 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 137 -135.44 52.51 REMARK 500 TYR A 151 -37.22 -133.39 REMARK 500 LYS B 149 -134.49 51.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-49955 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF RHCAS12F-GRNA-DNA TERNARY COMPLEX DBREF1 9NZP A 1 415 UNP A0A4U7J4W5_9FIRM DBREF2 9NZP A A0A4U7J4W5 1 415 DBREF1 9NZP B 1 415 UNP A0A4U7J4W5_9FIRM DBREF2 9NZP B A0A4U7J4W5 1 415 DBREF 9NZP C -5 39 PDB 9NZP 9NZP -5 39 DBREF 9NZP D -1 43 PDB 9NZP 9NZP -1 43 DBREF 9NZP E 1 160 PDB 9NZP 9NZP 1 160 SEQRES 1 A 415 MET ILE THR VAL ARG LYS LEU LYS ILE LEU ILE ASP GLY SEQRES 2 A 415 GLU SER ARG ASN GLU SER TYR LYS PHE ILE ARG ASP SER SEQRES 3 A 415 MET TYR ALA GLN TYR LEU ALA LEU ASN LYS ALA MET SER SEQRES 4 A 415 TYR LEU GLY THR ALA TYR LEU SER ARG ASP LYS GLU ILE SEQRES 5 A 415 PHE LYS GLU ALA ILE LYS SER LEU ASN ASN SER ASN PRO SEQRES 6 A 415 ILE PHE ASP ASN ILE ASN PHE GLY LYS GLY ILE ASP THR SEQRES 7 A 415 LYS SER SER VAL ASN GLN THR VAL LYS LYS HIS ILE GLN SEQRES 8 A 415 ALA ASP ILE LYS ASN GLY LEU ALA LYS GLY GLU ARG SER SEQRES 9 A 415 ILE ARG ASN TYR LYS ARG ASP TYR PRO LEU MET THR ARG SEQRES 10 A 415 GLY ARG ASP LEU LYS PHE PHE TYR CYS ASP THR ASN SER SEQRES 11 A 415 THR LYS VAL LYS VAL LYS TRP VAL ASN GLY ILE ILE PHE SEQRES 12 A 415 ASP VAL MET LEU GLY LYS GLU TYR ASN LYS ASN ASP LEU SEQRES 13 A 415 GLU LEU ARG SER PHE LEU ASN ARG VAL ILE ASN LYS GLU SEQRES 14 A 415 TYR LYS ILE SER GLN SER SER ILE CYS PHE ASP LYS HIS SEQRES 15 A 415 ASN ARG LEU ILE LEU ASN LEU SER VAL ASN ILE THR ASP SEQRES 16 A 415 ASN ILE PRO ASN GLU VAL VAL LYS GLY ARG ILE VAL GLY SEQRES 17 A 415 VAL ASP LEU GLY MET LYS ILE PRO ALA TYR VAL THR LEU SEQRES 18 A 415 ASN ASP SER GLU TYR ILE GLY LYS PRO ILE GLY ASP ILE SEQRES 19 A 415 ASN ASP PHE LEU LYS VAL ARG LYS GLN PHE LYS GLU ARG SEQRES 20 A 415 LYS GLU ARG LEU GLN LYS GLN LEU ALA ILE ASN LYS GLY SEQRES 21 A 415 GLY ARG GLY ILE THR ASN LYS MET GLN LEU MET ASP ALA SEQRES 22 A 415 PHE THR ASN LYS GLU LYS ASN PHE ALA ASN THR TYR ASN SEQRES 23 A 415 HIS GLY VAL SER LYS ALA ILE ILE ASN PHE ALA LYS LYS SEQRES 24 A 415 TYR LYS ALA GLU GLN ILE ASN VAL GLU PHE LEU ALA LEU SEQRES 25 A 415 ALA GLY SER GLU LYS GLU ILE LEU SER SER THR ILE ARG SEQRES 26 A 415 TYR TRP SER TYR TYR GLN LEU GLN GLN MET ILE GLU TYR SEQRES 27 A 415 LYS ALA ASN ARG GLU GLY ILE ALA VAL LYS TYR VAL ASP SEQRES 28 A 415 PRO TYR LEU THR SER GLN THR CYS CYS LYS CYS GLY ASN SEQRES 29 A 415 TYR GLU VAL GLY GLN ARG ILE ASN GLN GLU LEU PHE GLU SEQRES 30 A 415 CYS LYS LEU CYS GLY ASN LYS MET ASN ALA ASP ARG ASN SEQRES 31 A 415 ALA SER PHE ASN ILE ALA ARG SER THR LYS TYR ILE SER SEQRES 32 A 415 SER LYS GLU GLU SER ASP PHE TYR LYS GLN LEU LYS SEQRES 1 B 415 MET ILE THR VAL ARG LYS LEU LYS ILE LEU ILE ASP GLY SEQRES 2 B 415 GLU SER ARG ASN GLU SER TYR LYS PHE ILE ARG ASP SER SEQRES 3 B 415 MET TYR ALA GLN TYR LEU ALA LEU ASN LYS ALA MET SER SEQRES 4 B 415 TYR LEU GLY THR ALA TYR LEU SER ARG ASP LYS GLU ILE SEQRES 5 B 415 PHE LYS GLU ALA ILE LYS SER LEU ASN ASN SER ASN PRO SEQRES 6 B 415 ILE PHE ASP ASN ILE ASN PHE GLY LYS GLY ILE ASP THR SEQRES 7 B 415 LYS SER SER VAL ASN GLN THR VAL LYS LYS HIS ILE GLN SEQRES 8 B 415 ALA ASP ILE LYS ASN GLY LEU ALA LYS GLY GLU ARG SER SEQRES 9 B 415 ILE ARG ASN TYR LYS ARG ASP TYR PRO LEU MET THR ARG SEQRES 10 B 415 GLY ARG ASP LEU LYS PHE PHE TYR CYS ASP THR ASN SER SEQRES 11 B 415 THR LYS VAL LYS VAL LYS TRP VAL ASN GLY ILE ILE PHE SEQRES 12 B 415 ASP VAL MET LEU GLY LYS GLU TYR ASN LYS ASN ASP LEU SEQRES 13 B 415 GLU LEU ARG SER PHE LEU ASN ARG VAL ILE ASN LYS GLU SEQRES 14 B 415 TYR LYS ILE SER GLN SER SER ILE CYS PHE ASP LYS HIS SEQRES 15 B 415 ASN ARG LEU ILE LEU ASN LEU SER VAL ASN ILE THR ASP SEQRES 16 B 415 ASN ILE PRO ASN GLU VAL VAL LYS GLY ARG ILE VAL GLY SEQRES 17 B 415 VAL ASP LEU GLY MET LYS ILE PRO ALA TYR VAL THR LEU SEQRES 18 B 415 ASN ASP SER GLU TYR ILE GLY LYS PRO ILE GLY ASP ILE SEQRES 19 B 415 ASN ASP PHE LEU LYS VAL ARG LYS GLN PHE LYS GLU ARG SEQRES 20 B 415 LYS GLU ARG LEU GLN LYS GLN LEU ALA ILE ASN LYS GLY SEQRES 21 B 415 GLY ARG GLY ILE THR ASN LYS MET GLN LEU MET ASP ALA SEQRES 22 B 415 PHE THR ASN LYS GLU LYS ASN PHE ALA ASN THR TYR ASN SEQRES 23 B 415 HIS GLY VAL SER LYS ALA ILE ILE ASN PHE ALA LYS LYS SEQRES 24 B 415 TYR LYS ALA GLU GLN ILE ASN VAL GLU PHE LEU ALA LEU SEQRES 25 B 415 ALA GLY SER GLU LYS GLU ILE LEU SER SER THR ILE ARG SEQRES 26 B 415 TYR TRP SER TYR TYR GLN LEU GLN GLN MET ILE GLU TYR SEQRES 27 B 415 LYS ALA ASN ARG GLU GLY ILE ALA VAL LYS TYR VAL ASP SEQRES 28 B 415 PRO TYR LEU THR SER GLN THR CYS CYS LYS CYS GLY ASN SEQRES 29 B 415 TYR GLU VAL GLY GLN ARG ILE ASN GLN GLU LEU PHE GLU SEQRES 30 B 415 CYS LYS LEU CYS GLY ASN LYS MET ASN ALA ASP ARG ASN SEQRES 31 B 415 ALA SER PHE ASN ILE ALA ARG SER THR LYS TYR ILE SER SEQRES 32 B 415 SER LYS GLU GLU SER ASP PHE TYR LYS GLN LEU LYS SEQRES 1 C 45 DA DA DT DT DC DC DA DC DT DG DA DG DG SEQRES 2 C 45 DA DC DT DC DC DA DA DC DA DT DC DA DC SEQRES 3 C 45 DC DA DT DG DC DA DG DG DT DG DG DG DT SEQRES 4 C 45 DT DA DC DG DT DA SEQRES 1 D 45 DT DA DC DG DT DA DA DC DC DC DA DC DC SEQRES 2 D 45 DT DG DC DA DT DG DG DT DG DA DT DG DT SEQRES 3 D 45 DT DG DG DA DG DT DC DC DT DC DA DG DT SEQRES 4 D 45 DG DG DA DA DT DT SEQRES 1 E 160 A C G G C U G A U U U A G SEQRES 2 E 160 C A G C C G A A G U C U G SEQRES 3 E 160 A G G G C A U G U A G A A SEQRES 4 E 160 A A A A G U A U A G G U A SEQRES 5 E 160 U A U A C C A A C A U A C SEQRES 6 E 160 U U G C A U U G C C A C U SEQRES 7 E 160 C G G A A A G G G U U A A SEQRES 8 E 160 C C U U G G U C A U U G U SEQRES 9 E 160 G U U A C C G A C C A A G SEQRES 10 E 160 C A U U C C A G A A A U G SEQRES 11 E 160 G A A U G U A A A U C C U SEQRES 12 E 160 G C A U G G U G A U G U U SEQRES 13 E 160 G G A G HELIX 1 AA1 SER A 15 SER A 47 1 33 HELIX 2 AA2 ASP A 49 LEU A 60 1 12 HELIX 3 AA3 ASP A 77 ASN A 96 1 20 HELIX 4 AA4 ARG A 117 LEU A 121 5 5 HELIX 5 AA5 ASN A 152 ASN A 167 1 16 HELIX 6 AA6 SER B 15 LEU B 46 1 32 HELIX 7 AA7 ASP B 49 LEU B 60 1 12 HELIX 8 AA8 THR B 78 ASN B 96 1 19 HELIX 9 AA9 ARG B 117 LEU B 121 5 5 HELIX 10 AB1 LEU B 147 ASN B 152 1 6 HELIX 11 AB2 ASP B 155 ASN B 163 1 9 HELIX 12 AB3 ARG B 164 ILE B 166 5 3 SHEET 1 AA1 7 LEU A 114 THR A 116 0 SHEET 2 AA1 7 SER A 175 PHE A 179 -1 O ILE A 177 N LEU A 114 SHEET 3 AA1 7 LEU A 185 ASN A 192 -1 O ASN A 188 N SER A 176 SHEET 4 AA1 7 ILE A 2 ILE A 11 -1 N LEU A 7 O LEU A 187 SHEET 5 AA1 7 PHE A 143 VAL A 145 -1 O ASP A 144 N LEU A 10 SHEET 6 AA1 7 LYS A 134 VAL A 135 -1 N VAL A 135 O PHE A 143 SHEET 7 AA1 7 PHE A 123 PHE A 124 -1 N PHE A 124 O LYS A 134 SHEET 1 AA2 4 LEU A 114 THR A 116 0 SHEET 2 AA2 4 SER A 175 PHE A 179 -1 O ILE A 177 N LEU A 114 SHEET 3 AA2 4 LEU A 185 ASN A 192 -1 O ASN A 188 N SER A 176 SHEET 4 AA2 4 LYS A 171 ILE A 172 -1 N LYS A 171 O ASN A 192 SHEET 1 AA3 7 LEU B 114 THR B 116 0 SHEET 2 AA3 7 SER B 175 CYS B 178 -1 O ILE B 177 N LEU B 114 SHEET 3 AA3 7 ILE B 186 ASN B 192 -1 O ILE B 186 N CYS B 178 SHEET 4 AA3 7 THR B 3 ILE B 11 -1 N THR B 3 O VAL B 191 SHEET 5 AA3 7 ILE B 142 VAL B 145 -1 O ASP B 144 N LEU B 10 SHEET 6 AA3 7 LYS B 134 LYS B 136 -1 N VAL B 135 O PHE B 143 SHEET 7 AA3 7 LYS B 122 PHE B 123 -1 N LYS B 122 O LYS B 136 SHEET 1 AA4 4 LEU B 114 THR B 116 0 SHEET 2 AA4 4 SER B 175 CYS B 178 -1 O ILE B 177 N LEU B 114 SHEET 3 AA4 4 ILE B 186 ASN B 192 -1 O ILE B 186 N CYS B 178 SHEET 4 AA4 4 LYS B 171 ILE B 172 -1 N LYS B 171 O ASN B 192 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 653 0 0 12 22 0 0 6 7397 5 0 85 END