HEADER HYDROLASE 03-APR-25 9O1U TITLE HEPARANASE P6 IN COMPLEX WITH FRAGMENT J16 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEPARANASE 50 KDA SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEPARANASE 8 KDA SUBUNIT; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HPSE, HEP, HPA, HPA1, HPR1, HPSE1, HSE1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: HPSE, HEP, HPA, HPA1, HPR1, HPSE1, HSE1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HEPARANASE, SMALL MOLECULE, CANCER, COMPLEX, THERAPEUTICS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.J.DAVIES,R.L.FRKIC,C.J.JACKSON REVDAT 1 11-FEB-26 9O1U 0 JRNL AUTH L.J.DAVIES,C.WHITEFIELD,H.KIM,C.NITSCHE,C.J.JACKSON, JRNL AUTH 2 R.L.FRKIC JRNL TITL FRAGMENT SCREENING AND STRUCTURE-GUIDED DEVELOPMENT OF JRNL TITL 2 HEPARANASE INHIBITORS REVEAL ORTHOSTERIC AND ALLOSTERIC JRNL TITL 3 INHIBITION JRNL REF ACS MED.CHEM.LETT. 2026 JRNL REFN ISSN 1948-5875 JRNL DOI 10.1021/ACSMEDCHEMLETT.5C00587 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 38916 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1910 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.0300 - 4.5800 1.00 2819 150 0.2073 0.2738 REMARK 3 2 4.5800 - 3.6300 1.00 2713 142 0.1384 0.1730 REMARK 3 3 3.6300 - 3.1700 1.00 2636 148 0.1601 0.2079 REMARK 3 4 3.1700 - 2.8800 1.00 2654 154 0.1839 0.2498 REMARK 3 5 2.8800 - 2.6800 1.00 2630 145 0.1920 0.2676 REMARK 3 6 2.6800 - 2.5200 1.00 2647 126 0.1868 0.2602 REMARK 3 7 2.5200 - 2.3900 1.00 2629 113 0.1947 0.2766 REMARK 3 8 2.3900 - 2.2900 1.00 2633 120 0.1965 0.2716 REMARK 3 9 2.2900 - 2.2000 1.00 2631 129 0.1936 0.2482 REMARK 3 10 2.2000 - 2.1300 1.00 2607 141 0.2032 0.2585 REMARK 3 11 2.1300 - 2.0600 1.00 2590 155 0.2141 0.2895 REMARK 3 12 2.0600 - 2.0000 1.00 2594 137 0.2296 0.2696 REMARK 3 13 2.0000 - 1.9500 1.00 2623 108 0.2558 0.2618 REMARK 3 14 1.9500 - 1.9000 1.00 2600 142 0.3056 0.3663 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 NULL REMARK 3 ANGLE : 0.906 NULL REMARK 3 CHIRALITY : 0.053 559 REMARK 3 PLANARITY : 0.007 672 REMARK 3 DIHEDRAL : 16.432 1407 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 160 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0899 4.6942 -0.7546 REMARK 3 T TENSOR REMARK 3 T11: 0.1091 T22: 0.0821 REMARK 3 T33: 0.0889 T12: -0.0071 REMARK 3 T13: -0.0101 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 1.1303 L22: 0.8576 REMARK 3 L33: 1.1006 L12: -0.1715 REMARK 3 L13: 0.2863 L23: -0.0802 REMARK 3 S TENSOR REMARK 3 S11: 0.0001 S12: 0.0123 S13: -0.0258 REMARK 3 S21: 0.0180 S22: 0.0236 S23: -0.0496 REMARK 3 S31: 0.0476 S32: 0.0153 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 273 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.2293 4.1682 -22.5122 REMARK 3 T TENSOR REMARK 3 T11: 0.0942 T22: 0.1074 REMARK 3 T33: 0.1195 T12: -0.0037 REMARK 3 T13: 0.0037 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 0.2633 L22: 0.5133 REMARK 3 L33: 0.5242 L12: -0.2399 REMARK 3 L13: 0.3232 L23: -0.4883 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: 0.0545 S13: -0.0182 REMARK 3 S21: -0.0089 S22: 0.0029 S23: -0.0578 REMARK 3 S31: 0.0180 S32: 0.0599 S33: -0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 376 THROUGH 437 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.1705 8.4302 -25.5021 REMARK 3 T TENSOR REMARK 3 T11: 0.0940 T22: 0.0968 REMARK 3 T33: 0.0951 T12: 0.0015 REMARK 3 T13: 0.0061 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.9849 L22: 0.6513 REMARK 3 L33: 0.7110 L12: 0.2509 REMARK 3 L13: 0.3944 L23: -0.0525 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: 0.0590 S13: 0.0071 REMARK 3 S21: -0.0212 S22: 0.0021 S23: 0.0124 REMARK 3 S31: 0.0102 S32: -0.0189 S33: 0.0004 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 438 THROUGH 543 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.7082 7.7653 -34.0402 REMARK 3 T TENSOR REMARK 3 T11: 0.0958 T22: 0.1032 REMARK 3 T33: 0.0963 T12: -0.0151 REMARK 3 T13: -0.0061 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.4864 L22: 0.3606 REMARK 3 L33: 0.7234 L12: -0.0972 REMARK 3 L13: 0.1214 L23: 0.4616 REMARK 3 S TENSOR REMARK 3 S11: -0.0222 S12: 0.0048 S13: -0.0138 REMARK 3 S21: 0.0137 S22: 0.0128 S23: 0.0947 REMARK 3 S31: -0.0246 S32: -0.0950 S33: 0.0039 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 36 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.1973 3.5506 -50.3322 REMARK 3 T TENSOR REMARK 3 T11: 0.3912 T22: 0.4249 REMARK 3 T33: 0.1749 T12: -0.0396 REMARK 3 T13: 0.0251 T23: -0.0782 REMARK 3 L TENSOR REMARK 3 L11: 1.1262 L22: 0.1453 REMARK 3 L33: 0.0641 L12: -0.1478 REMARK 3 L13: -0.2207 L23: -0.0222 REMARK 3 S TENSOR REMARK 3 S11: 0.3395 S12: 0.2524 S13: 0.0024 REMARK 3 S21: -0.1841 S22: 0.1685 S23: -0.2413 REMARK 3 S31: -0.0618 S32: 0.0005 S33: 0.0205 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.6787 -7.4431 -39.1980 REMARK 3 T TENSOR REMARK 3 T11: 0.1781 T22: 0.1693 REMARK 3 T33: 0.2083 T12: -0.0112 REMARK 3 T13: 0.0023 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 0.0261 L22: 0.0194 REMARK 3 L33: 0.0349 L12: -0.0040 REMARK 3 L13: 0.0099 L23: -0.0218 REMARK 3 S TENSOR REMARK 3 S11: 0.1033 S12: 0.2865 S13: -0.2381 REMARK 3 S21: 0.0831 S22: -0.0106 S23: -0.1307 REMARK 3 S31: 0.2521 S32: 0.1698 S33: 0.0004 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 46 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.7173 -12.3249 -29.0214 REMARK 3 T TENSOR REMARK 3 T11: 0.3051 T22: 0.1700 REMARK 3 T33: 0.2377 T12: -0.0212 REMARK 3 T13: -0.0974 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.2715 L22: 0.0895 REMARK 3 L33: 0.2103 L12: 0.0804 REMARK 3 L13: -0.1839 L23: -0.0957 REMARK 3 S TENSOR REMARK 3 S11: 0.0141 S12: 0.3129 S13: -0.2431 REMARK 3 S21: -0.2802 S22: 0.1729 S23: 0.1037 REMARK 3 S31: 0.4079 S32: -0.0818 S33: -0.0034 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 51 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.9106 -0.6763 -18.6329 REMARK 3 T TENSOR REMARK 3 T11: 0.1244 T22: 0.0932 REMARK 3 T33: 0.1383 T12: -0.0142 REMARK 3 T13: 0.0028 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.0128 L22: 0.0104 REMARK 3 L33: 0.0310 L12: -0.0116 REMARK 3 L13: 0.0007 L23: -0.0039 REMARK 3 S TENSOR REMARK 3 S11: 0.0172 S12: -0.0517 S13: -0.0447 REMARK 3 S21: -0.0416 S22: -0.0498 S23: 0.0683 REMARK 3 S31: -0.0414 S32: -0.0287 S33: -0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 59 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1504 16.3093 -8.0053 REMARK 3 T TENSOR REMARK 3 T11: 0.1215 T22: 0.1512 REMARK 3 T33: 0.1471 T12: -0.0219 REMARK 3 T13: -0.0167 T23: -0.0254 REMARK 3 L TENSOR REMARK 3 L11: 0.0300 L22: 0.0165 REMARK 3 L33: 0.0124 L12: -0.0186 REMARK 3 L13: 0.0142 L23: -0.0031 REMARK 3 S TENSOR REMARK 3 S11: 0.0354 S12: 0.0854 S13: 0.0102 REMARK 3 S21: -0.0856 S22: -0.1020 S23: -0.0136 REMARK 3 S31: -0.1553 S32: 0.0163 S33: -0.0004 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 68 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5448 22.9861 -3.7259 REMARK 3 T TENSOR REMARK 3 T11: 0.2394 T22: 0.1976 REMARK 3 T33: 0.2700 T12: 0.0382 REMARK 3 T13: 0.0467 T23: -0.0449 REMARK 3 L TENSOR REMARK 3 L11: 0.0293 L22: 0.4183 REMARK 3 L33: 0.0228 L12: -0.1109 REMARK 3 L13: 0.0259 L23: -0.0970 REMARK 3 S TENSOR REMARK 3 S11: 0.1906 S12: 0.1102 S13: 0.4464 REMARK 3 S21: -0.0865 S22: -0.0134 S23: -0.4868 REMARK 3 S31: -0.2949 S32: 0.0176 S33: -0.0023 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 78 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3376 15.9483 -12.4710 REMARK 3 T TENSOR REMARK 3 T11: 0.1001 T22: 0.1659 REMARK 3 T33: 0.1376 T12: -0.0061 REMARK 3 T13: -0.0077 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 1.5533 L22: 1.9273 REMARK 3 L33: 1.4983 L12: -1.0584 REMARK 3 L13: -0.1757 L23: 1.2181 REMARK 3 S TENSOR REMARK 3 S11: -0.1559 S12: -0.4296 S13: -0.1520 REMARK 3 S21: 0.3532 S22: 0.0126 S23: 0.1885 REMARK 3 S31: 0.2092 S32: -0.1652 S33: -0.0427 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 88 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0194 8.9279 -8.5717 REMARK 3 T TENSOR REMARK 3 T11: 0.1275 T22: 0.1146 REMARK 3 T33: 0.1369 T12: -0.0160 REMARK 3 T13: 0.0097 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 0.0514 L22: 0.0086 REMARK 3 L33: 0.0608 L12: 0.0199 REMARK 3 L13: -0.0163 L23: 0.0039 REMARK 3 S TENSOR REMARK 3 S11: -0.1071 S12: -0.0952 S13: -0.1728 REMARK 3 S21: -0.1148 S22: 0.0446 S23: -0.0611 REMARK 3 S31: -0.0586 S32: 0.0352 S33: 0.0002 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 101 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1883 14.8842 6.0432 REMARK 3 T TENSOR REMARK 3 T11: 0.1915 T22: 0.2098 REMARK 3 T33: 0.1244 T12: -0.0072 REMARK 3 T13: -0.0201 T23: -0.0167 REMARK 3 L TENSOR REMARK 3 L11: 0.5419 L22: 0.9929 REMARK 3 L33: 0.0207 L12: -0.7334 REMARK 3 L13: -0.1055 L23: 0.1426 REMARK 3 S TENSOR REMARK 3 S11: 0.0106 S12: -0.3244 S13: 0.3527 REMARK 3 S21: 0.2177 S22: 0.0269 S23: -0.2316 REMARK 3 S31: -0.4997 S32: -0.1037 S33: -0.0756 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9O1U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-APR-25. REMARK 100 THE DEPOSITION ID IS D_1000294123. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38981 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 45.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.50 REMARK 200 R MERGE (I) : 0.48200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 13.90 REMARK 200 R MERGE FOR SHELL (I) : 3.73200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M REMARK 280 AMMONIUMA ACETATE, 25% PEG 4000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.69100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.22550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.22650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.22550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.69100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.22650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -125.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 343 118.21 -170.00 REMARK 500 SER A 345 -163.73 -166.74 REMARK 500 LEU A 355 -50.34 -131.66 REMARK 500 LEU A 419 -160.23 -107.29 REMARK 500 PHE B 101 -52.90 -125.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 960 DISTANCE = 6.29 ANGSTROMS DBREF 9O1U A 160 543 UNP Q9Y251 HPSE_HUMAN 160 543 DBREF 9O1U B 36 107 UNP Q9Y251 HPSE_HUMAN 36 107 SEQADV 9O1U LYS A 178 UNP Q9Y251 ASN 178 CONFLICT SEQADV 9O1U SER A 195 UNP Q9Y251 ALA 195 CONFLICT SEQADV 9O1U GLY A 197 UNP Q9Y251 LEU 197 CONFLICT SEQADV 9O1U ALA A 212 UNP Q9Y251 SER 212 CONFLICT SEQADV 9O1U ASP A 219 UNP Q9Y251 SER 219 CONFLICT SEQADV 9O1U ARG A 230 UNP Q9Y251 LEU 230 CONFLICT SEQADV 9O1U GLY A 234 UNP Q9Y251 ASP 234 CONFLICT SEQADV 9O1U LYS A 244 UNP Q9Y251 GLU 244 CONFLICT SEQADV 9O1U HIS A 248 UNP Q9Y251 GLN 248 CONFLICT SEQADV 9O1U GLY A 273 UNP Q9Y251 ARG 273 CONFLICT SEQADV 9O1U ALA A 292 UNP Q9Y251 SER 292 CONFLICT SEQADV 9O1U LEU A 307 UNP Q9Y251 LYS 307 CONFLICT SEQADV 9O1U THR A 318 UNP Q9Y251 ILE 318 CONFLICT SEQADV 9O1U GLN A 322 UNP Q9Y251 SER 322 CONFLICT SEQADV 9O1U LEU A 327 UNP Q9Y251 PHE 327 CONFLICT SEQADV 9O1U GLY A 354 UNP Q9Y251 LEU 354 CONFLICT SEQADV 9O1U GLN A 426 UNP Q9Y251 SER 426 CONFLICT SEQADV 9O1U ASP A 427 UNP Q9Y251 LYS 427 CONFLICT SEQADV 9O1U GLN A 477 UNP Q9Y251 LYS 477 CONFLICT SEQADV 9O1U HIS A 483 UNP Q9Y251 LEU 483 CONFLICT SEQADV 9O1U ASP A 486 UNP Q9Y251 HIS 486 CONFLICT SEQADV 9O1U GLN A 498 UNP Q9Y251 LEU 498 CONFLICT SEQADV 9O1U LYS A 512 UNP Q9Y251 MET 512 CONFLICT SEQADV 9O1U PRO A 513 UNP Q9Y251 GLU 513 CONFLICT SEQADV 9O1U ALA A 530 UNP Q9Y251 SER 530 CONFLICT SEQADV 9O1U PRO A 540 UNP Q9Y251 ALA 540 CONFLICT SEQRES 1 A 384 PHE LYS ASN SER THR TYR SER ARG SER SER VAL ASP VAL SEQRES 2 A 384 LEU TYR THR PHE ALA LYS CYS SER GLY LEU ASP LEU ILE SEQRES 3 A 384 PHE GLY LEU ASN ALA LEU LEU ARG THR SER ASP GLY GLN SEQRES 4 A 384 TRP ASN SER SER ASN ALA GLN LEU LEU LEU ASP TYR CYS SEQRES 5 A 384 ALA SER LYS GLY TYR ASN ILE ASP TRP GLU LEU GLY ASN SEQRES 6 A 384 GLU PRO ASN SER PHE ARG LYS LYS ALA GLY ILE PHE ILE SEQRES 7 A 384 ASN GLY SER GLN LEU GLY LYS ASP PHE ILE HIS LEU HIS SEQRES 8 A 384 LYS LEU LEU ARG LYS SER THR PHE LYS ASN ALA LYS LEU SEQRES 9 A 384 TYR GLY PRO ASP VAL GLY GLN PRO ARG GLY LYS THR ALA SEQRES 10 A 384 LYS MET LEU LYS SER PHE LEU LYS ALA GLY GLY GLU VAL SEQRES 11 A 384 ILE ASP ALA VAL THR TRP HIS HIS TYR TYR LEU ASN GLY SEQRES 12 A 384 ARG THR ALA THR LEU GLU ASP PHE LEU ASN PRO ASP VAL SEQRES 13 A 384 LEU ASP THR PHE ILE SER GLN VAL GLN LYS VAL LEU GLN SEQRES 14 A 384 VAL VAL GLU SER THR ARG PRO GLY LYS LYS VAL TRP LEU SEQRES 15 A 384 GLY GLU THR SER SER ALA TYR GLY GLY GLY ALA PRO GLY SEQRES 16 A 384 LEU SER ASP THR PHE ALA ALA GLY PHE MET TRP LEU ASP SEQRES 17 A 384 LYS LEU GLY LEU SER ALA ARG MET GLY ILE GLU VAL VAL SEQRES 18 A 384 MET ARG GLN VAL PHE PHE GLY ALA GLY ASN TYR HIS LEU SEQRES 19 A 384 VAL ASP GLU ASN PHE ASP PRO LEU PRO ASP TYR TRP LEU SEQRES 20 A 384 SER LEU LEU PHE LYS LYS LEU VAL GLY THR LYS VAL LEU SEQRES 21 A 384 MET ALA SER VAL GLN GLY GLN ASP ARG ARG LYS LEU ARG SEQRES 22 A 384 VAL TYR LEU HIS CYS THR ASN THR ASP ASN PRO ARG TYR SEQRES 23 A 384 LYS GLU GLY ASP LEU THR LEU TYR ALA ILE ASN LEU HIS SEQRES 24 A 384 ASN VAL THR LYS TYR LEU ARG LEU PRO TYR PRO PHE SER SEQRES 25 A 384 ASN LYS GLN VAL ASP GLN TYR LEU LEU ARG PRO HIS GLY SEQRES 26 A 384 PRO ASP GLY LEU LEU SER LYS SER VAL GLN LEU ASN GLY SEQRES 27 A 384 GLN THR LEU LYS MET VAL ASP ASP GLN THR LEU PRO PRO SEQRES 28 A 384 LEU LYS PRO LYS PRO LEU ARG PRO GLY SER SER LEU GLY SEQRES 29 A 384 LEU PRO ALA PHE SER TYR ALA PHE PHE VAL ILE ARG ASN SEQRES 30 A 384 ALA LYS VAL PRO ALA CYS ILE SEQRES 1 B 72 GLN ASP VAL VAL ASP LEU ASP PHE PHE THR GLN GLU PRO SEQRES 2 B 72 LEU HIS LEU VAL SER PRO SER PHE LEU SER VAL THR ILE SEQRES 3 B 72 ASP ALA ASN LEU ALA THR ASP PRO ARG PHE LEU ILE LEU SEQRES 4 B 72 LEU GLY SER PRO LYS LEU ARG THR LEU ALA ARG GLY LEU SEQRES 5 B 72 SER PRO ALA TYR LEU ARG PHE GLY GLY THR LYS THR ASP SEQRES 6 B 72 PHE LEU ILE PHE ASP PRO LYS HET AJO A 601 16 HET ACT A 602 4 HET ACT A 603 4 HET ACT A 604 4 HET ACT A 605 4 HET ACT A 606 4 HET ACT A 607 4 HET ACT A 608 4 HET ACT A 609 4 HET ACT A 610 4 HET AJO A 611 16 HET EDO A 612 4 HET EDO A 613 4 HET EDO A 614 4 HET EDO A 615 4 HET PEG A 616 7 HET ACT A 617 4 HET SO4 A 618 5 HET SO4 A 619 5 HET SO4 A 620 5 HET SO4 A 621 5 HET SO4 A 622 5 HET SO4 A 623 5 HET DMS B 201 4 HET AJO B 202 16 HET EDO B 203 4 HET EDO B 204 4 HET ACT B 205 4 HETNAM AJO 2-[CYANOMETHYL(METHYL)AMINO]-N-(6-METHYLPYRIDIN-2-YL) HETNAM 2 AJO ETHANAMIDE HETNAM ACT ACETATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM SO4 SULFATE ION HETNAM DMS DIMETHYL SULFOXIDE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 AJO 3(C11 H14 N4 O) FORMUL 4 ACT 11(C2 H3 O2 1-) FORMUL 14 EDO 6(C2 H6 O2) FORMUL 18 PEG C4 H10 O3 FORMUL 20 SO4 6(O4 S 2-) FORMUL 26 DMS C2 H6 O S FORMUL 31 HOH *300(H2 O) HELIX 1 AA1 SER A 166 SER A 180 1 15 HELIX 2 AA2 SER A 201 GLY A 215 1 15 HELIX 3 AA3 GLU A 225 ASN A 227 5 3 HELIX 4 AA4 SER A 228 GLY A 234 1 7 HELIX 5 AA5 ASN A 238 SER A 256 1 19 HELIX 6 AA6 ARG A 272 GLY A 287 1 16 HELIX 7 AA7 GLU A 288 ILE A 290 5 3 HELIX 8 AA8 THR A 306 LEU A 311 1 6 HELIX 9 AA9 ASN A 312 ARG A 334 1 23 HELIX 10 AB1 THR A 358 ALA A 360 5 3 HELIX 11 AB2 ALA A 361 GLY A 376 1 16 HELIX 12 AB3 LEU A 401 LEU A 413 1 13 HELIX 13 AB4 PRO A 469 LYS A 473 5 5 HELIX 14 AB5 ASP A 486 SER A 490 5 5 HELIX 15 AB6 VAL A 539 ILE A 543 5 5 HELIX 16 AB7 ASN B 64 THR B 67 5 4 HELIX 17 AB8 ASP B 68 ILE B 73 1 6 HELIX 18 AB9 LEU B 74 GLY B 76 5 3 HELIX 19 AC1 SER B 77 LEU B 87 1 11 HELIX 20 AC2 GLY B 96 PHE B 101 5 6 SHEET 1 AA1 2 THR A 164 TYR A 165 0 SHEET 2 AA1 2 ILE B 103 PHE B 104 1 O ILE B 103 N TYR A 165 SHEET 1 AA2 9 LEU A 182 LEU A 188 0 SHEET 2 AA2 9 ASP A 219 LEU A 222 1 O ASP A 219 N PHE A 186 SHEET 3 AA2 9 LEU A 263 VAL A 268 1 O TYR A 264 N TRP A 220 SHEET 4 AA2 9 ALA A 292 ASN A 301 1 O HIS A 296 N VAL A 268 SHEET 5 AA2 9 VAL A 339 TYR A 348 1 O TRP A 340 N VAL A 293 SHEET 6 AA2 9 ILE A 377 ARG A 382 1 O MET A 381 N LEU A 341 SHEET 7 AA2 9 LEU B 57 ASP B 62 1 O SER B 58 N VAL A 380 SHEET 8 AA2 9 ALA B 90 GLY B 95 1 O ARG B 93 N ILE B 61 SHEET 9 AA2 9 LEU A 182 LEU A 188 1 N ILE A 185 O PHE B 94 SHEET 1 AA3 4 GLN A 498 THR A 499 0 SHEET 2 AA3 4 GLN A 494 LEU A 495 -1 N LEU A 495 O GLN A 498 SHEET 3 AA3 4 VAL A 475 ARG A 481 -1 N ARG A 481 O GLN A 494 SHEET 4 AA3 4 LYS A 514 LEU A 516 -1 O LEU A 516 N VAL A 475 SHEET 1 AA4 8 GLN A 498 THR A 499 0 SHEET 2 AA4 8 GLN A 494 LEU A 495 -1 N LEU A 495 O GLN A 498 SHEET 3 AA4 8 VAL A 475 ARG A 481 -1 N ARG A 481 O GLN A 494 SHEET 4 AA4 8 SER A 528 ILE A 534 -1 O PHE A 531 N TYR A 478 SHEET 5 AA4 8 LEU A 450 ASN A 456 -1 N LEU A 452 O PHE A 532 SHEET 6 AA4 8 LEU A 431 THR A 438 -1 N HIS A 436 O THR A 451 SHEET 7 AA4 8 VAL A 414 VAL A 418 -1 N GLY A 415 O CYS A 437 SHEET 8 AA4 8 HIS B 50 LEU B 51 -1 O HIS B 50 N VAL A 418 SHEET 1 AA5 4 MET A 420 VAL A 423 0 SHEET 2 AA5 4 VAL B 38 PHE B 44 -1 O ASP B 42 N SER A 422 SHEET 3 AA5 4 LYS A 462 ARG A 465 1 N TYR A 463 O VAL B 39 SHEET 4 AA5 4 LEU A 522 LEU A 524 -1 O LEU A 524 N LYS A 462 SSBOND 1 CYS A 437 CYS A 542 1555 1555 2.03 CISPEP 1 GLY A 265 PRO A 266 0 4.53 CISPEP 2 GLN A 383 VAL A 384 0 -8.44 CISPEP 3 TYR A 468 PRO A 469 0 0.11 CISPEP 4 SER B 88 PRO B 89 0 -0.52 CRYST1 59.382 66.453 122.451 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016840 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015048 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008167 0.00000 CONECT 2210 3061 CONECT 3061 2210 CONECT 3654 3655 3662 3665 CONECT 3655 3654 3664 CONECT 3656 3657 3666 3667 CONECT 3657 3656 3658 CONECT 3658 3657 3659 CONECT 3659 3658 3660 CONECT 3660 3659 3663 3666 CONECT 3661 3662 3667 3669 CONECT 3662 3654 3661 CONECT 3663 3660 CONECT 3664 3655 3668 CONECT 3665 3654 CONECT 3666 3656 3660 CONECT 3667 3656 3661 CONECT 3668 3664 CONECT 3669 3661 CONECT 3670 3671 3672 3673 CONECT 3671 3670 CONECT 3672 3670 CONECT 3673 3670 CONECT 3674 3675 3676 3677 CONECT 3675 3674 CONECT 3676 3674 CONECT 3677 3674 CONECT 3678 3679 3680 3681 CONECT 3679 3678 CONECT 3680 3678 CONECT 3681 3678 CONECT 3682 3683 3684 3685 CONECT 3683 3682 CONECT 3684 3682 CONECT 3685 3682 CONECT 3686 3687 3688 3689 CONECT 3687 3686 CONECT 3688 3686 CONECT 3689 3686 CONECT 3690 3691 3692 3693 CONECT 3691 3690 CONECT 3692 3690 CONECT 3693 3690 CONECT 3694 3695 3696 3697 CONECT 3695 3694 CONECT 3696 3694 CONECT 3697 3694 CONECT 3698 3699 3700 3701 CONECT 3699 3698 CONECT 3700 3698 CONECT 3701 3698 CONECT 3702 3703 3704 3705 CONECT 3703 3702 CONECT 3704 3702 CONECT 3705 3702 CONECT 3706 3707 3714 3717 CONECT 3707 3706 3716 CONECT 3708 3709 3718 3719 CONECT 3709 3708 3710 CONECT 3710 3709 3711 CONECT 3711 3710 3712 CONECT 3712 3711 3715 3718 CONECT 3713 3714 3719 3721 CONECT 3714 3706 3713 CONECT 3715 3712 CONECT 3716 3707 3720 CONECT 3717 3706 CONECT 3718 3708 3712 CONECT 3719 3708 3713 CONECT 3720 3716 CONECT 3721 3713 CONECT 3722 3723 3724 CONECT 3723 3722 CONECT 3724 3722 3725 CONECT 3725 3724 CONECT 3726 3727 3728 CONECT 3727 3726 CONECT 3728 3726 3729 CONECT 3729 3728 CONECT 3730 3731 3732 CONECT 3731 3730 CONECT 3732 3730 3733 CONECT 3733 3732 CONECT 3734 3735 3736 CONECT 3735 3734 CONECT 3736 3734 3737 CONECT 3737 3736 CONECT 3738 3739 3740 CONECT 3739 3738 CONECT 3740 3738 3741 CONECT 3741 3740 3742 CONECT 3742 3741 3743 CONECT 3743 3742 3744 CONECT 3744 3743 CONECT 3745 3746 3747 3748 CONECT 3746 3745 CONECT 3747 3745 CONECT 3748 3745 CONECT 3749 3750 3751 3752 3753 CONECT 3750 3749 CONECT 3751 3749 CONECT 3752 3749 CONECT 3753 3749 CONECT 3754 3755 3756 3757 3758 CONECT 3755 3754 CONECT 3756 3754 CONECT 3757 3754 CONECT 3758 3754 CONECT 3759 3760 3761 3762 3763 CONECT 3760 3759 CONECT 3761 3759 CONECT 3762 3759 CONECT 3763 3759 CONECT 3764 3765 3766 3767 3768 CONECT 3765 3764 CONECT 3766 3764 CONECT 3767 3764 CONECT 3768 3764 CONECT 3769 3770 3771 3772 3773 CONECT 3770 3769 CONECT 3771 3769 CONECT 3772 3769 CONECT 3773 3769 CONECT 3774 3775 3776 3777 3778 CONECT 3775 3774 CONECT 3776 3774 CONECT 3777 3774 CONECT 3778 3774 CONECT 3779 3780 3781 3782 CONECT 3780 3779 CONECT 3781 3779 CONECT 3782 3779 CONECT 3783 3784 3791 3794 CONECT 3784 3783 3793 CONECT 3785 3786 3795 3796 CONECT 3786 3785 3787 CONECT 3787 3786 3788 CONECT 3788 3787 3789 CONECT 3789 3788 3792 3795 CONECT 3790 3791 3796 3798 CONECT 3791 3783 3790 CONECT 3792 3789 CONECT 3793 3784 3797 CONECT 3794 3783 CONECT 3795 3785 3789 CONECT 3796 3785 3790 CONECT 3797 3793 CONECT 3798 3790 CONECT 3799 3800 3801 CONECT 3800 3799 CONECT 3801 3799 3802 CONECT 3802 3801 CONECT 3803 3804 3805 CONECT 3804 3803 CONECT 3805 3803 3806 CONECT 3806 3805 CONECT 3807 3808 3809 3810 CONECT 3808 3807 CONECT 3809 3807 CONECT 3810 3807 MASTER 436 0 28 20 27 0 0 6 4058 2 159 36 END