HEADER HYDROLASE 08-APR-25 9O4M TITLE CRYSTAL STRUCTURE OF UBIQUITIN CARBOXY TERMINAL HYDROLASE L1 Q209C TITLE 2 MUTANT COVALENTLY CROSSLINKED TO UBIQUITIN GENETICALLY ENCODED WITH TITLE 3 N6-(6-BROMOHEXANOYL)-L-LYSINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYUBIQUITIN-C; COMPND 3 CHAIN: C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE ISOZYME L1; COMPND 7 CHAIN: A, B; COMPND 8 SYNONYM: UCH-L1,NEURON CYTOPLASMIC PROTEIN 9.5,PGP 9.5,PGP9.5, COMPND 9 UBIQUITIN THIOESTERASE L1; COMPND 10 EC: 3.4.19.12; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: UBC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: UCHL1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS UCHL1, GENETIC CODE EXPANSION, COVALENT TRAPPING, UNNATURAL AMINO KEYWDS 2 ACID, UBIQUITIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.PANNALA,R.PATEL,C.DAS REVDAT 2 03-DEC-25 9O4M 1 JRNL REVDAT 1 30-JUL-25 9O4M 0 JRNL AUTH N.M.PANNALA,R.S.PATEL,A.S.ANIT,D.BHATTACHARYA,K.N.TERON, JRNL AUTH 2 B.DROWN,R.FASAN,C.DAS JRNL TITL INTERNAL UBIQUITIN ELECTROPHILES FOR COVALENT TRAPPING AND JRNL TITL 2 INHIBITION OF DEUBIQUITINASES. JRNL REF CHEMBIOCHEM V. 26 00318 2025 JRNL REFN ESSN 1439-7633 JRNL PMID 40626928 JRNL DOI 10.1002/CBIC.202500318 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 48528 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.9300 - 4.8000 1.00 3544 151 0.1765 0.2075 REMARK 3 2 4.8000 - 3.8200 0.99 3381 148 0.1614 0.1894 REMARK 3 3 3.8200 - 3.3400 0.99 3337 146 0.1864 0.2295 REMARK 3 4 3.3400 - 3.0300 0.99 3309 137 0.2427 0.2536 REMARK 3 5 3.0300 - 2.8200 0.99 3329 142 0.2452 0.3124 REMARK 3 6 2.8200 - 2.6500 1.00 3337 146 0.2774 0.3322 REMARK 3 7 2.6500 - 2.5200 1.00 3314 140 0.2619 0.3216 REMARK 3 8 2.5200 - 2.4100 1.00 3298 142 0.2654 0.3517 REMARK 3 9 2.4100 - 2.3200 1.00 3323 138 0.2670 0.3533 REMARK 3 10 2.3200 - 2.2400 1.00 3312 145 0.2858 0.3328 REMARK 3 11 2.2400 - 2.1700 1.00 3291 141 0.3044 0.3413 REMARK 3 12 2.1700 - 2.1100 1.00 3305 142 0.3209 0.3189 REMARK 3 13 2.1100 - 2.0500 0.98 3222 141 0.3994 0.4043 REMARK 3 14 2.0500 - 2.0000 0.98 3229 138 0.4728 0.4868 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4619 REMARK 3 ANGLE : 0.439 6232 REMARK 3 CHIRALITY : 0.038 705 REMARK 3 PLANARITY : 0.003 823 REMARK 3 DIHEDRAL : 7.597 628 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9O4M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-APR-25. REMARK 100 THE DEPOSITION ID IS D_1000294814. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 R 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO REMARK 200 DATA SCALING SOFTWARE : CRYSALISPRO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48911 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 140.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 10.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.9100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.80 REMARK 200 R MERGE FOR SHELL (I) : 0.83500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.020 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.1 M DL-MALIC ACID, PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.55333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.77667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.77667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 93.55333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 415 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 151 REMARK 465 CYS A 152 REMARK 465 ARG A 153 REMARK 465 VAL A 154 REMARK 465 ASP A 155 REMARK 465 ASP A 156 REMARK 465 ALA A 223 REMARK 465 CYS B 152 REMARK 465 ARG B 153 REMARK 465 VAL B 154 REMARK 465 ASP B 155 REMARK 465 ALA B 223 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU D 51 CG CD OE1 OE2 REMARK 470 ARG D 54 CG CD NE CZ NH1 NH2 REMARK 470 SER D 57 OG REMARK 470 GLN D 62 CB CG CD OE1 NE2 REMARK 470 GLU D 64 CB CG CD OE1 OE2 REMARK 470 ARG D 72 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 7 CG CD OE1 OE2 REMARK 470 GLN A 25 CG CD OE1 NE2 REMARK 470 ARG A 27 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 60 CG CD OE1 OE2 REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 LYS A 71 CG CD CE NZ REMARK 470 GLU A 74 CG CD OE1 OE2 REMARK 470 LYS A 157 CG CD CE NZ REMARK 470 LYS A 199 CG CD CE NZ REMARK 470 LYS A 221 CG CD CE NZ REMARK 470 GLU B 11 CG CD OE1 OE2 REMARK 470 GLN B 25 CG CD OE1 NE2 REMARK 470 LYS B 65 CG CD CE NZ REMARK 470 GLU B 74 CG CD OE1 OE2 REMARK 470 LYS B 123 CG CD CE NZ REMARK 470 GLN B 151 CG CD OE1 NE2 REMARK 470 LYS B 157 CG CD CE NZ REMARK 470 GLU B 190 CG CD OE1 OE2 REMARK 470 LYS B 195 CG CD CE NZ REMARK 470 GLU B 206 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS B 209 H6C1 6NA C 301 1.39 REMARK 500 SG CYS A 209 H6C2 6NA D 101 1.55 REMARK 500 NZ LYS D 9 O 6NA D 101 1.79 REMARK 500 NZ LYS C 9 O 6NA C 301 1.85 REMARK 500 OD1 ASN B 61 O HOH B 301 2.03 REMARK 500 OE2 GLU A 149 O HOH A 401 2.05 REMARK 500 O HOH A 407 O HOH A 410 2.06 REMARK 500 NZ LYS B 83 O HOH B 302 2.12 REMARK 500 NZ LYS D 9 CA 6NA D 101 2.14 REMARK 500 OH TYR B 173 O HOH B 303 2.15 REMARK 500 O GLY C 76 O HOH C 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP D 52 -75.21 -55.56 REMARK 500 ARG D 54 -166.74 174.04 REMARK 500 GLN D 62 -147.48 -114.50 REMARK 500 GLU B 208 66.69 -119.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 519 DISTANCE = 6.73 ANGSTROMS DBREF 9O4M C 1 76 UNP P0CG48 UBC_HUMAN 1 76 DBREF 9O4M D 1 76 UNP P0CG48 UBC_HUMAN 1 76 DBREF 9O4M A 1 223 UNP P09936 UCHL1_HUMAN 1 223 DBREF 9O4M B 1 223 UNP P09936 UCHL1_HUMAN 1 223 SEQADV 9O4M LYS C 9 UNP P0CG48 THR 9 CONFLICT SEQADV 9O4M LYS D 9 UNP P0CG48 THR 9 CONFLICT SEQADV 9O4M CYS A 209 UNP P09936 GLN 209 ENGINEERED MUTATION SEQADV 9O4M CYS B 209 UNP P09936 GLN 209 ENGINEERED MUTATION SEQRES 1 C 76 MET GLN ILE PHE VAL LYS THR LEU LYS GLY LYS THR ILE SEQRES 2 C 76 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 C 76 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 C 76 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 C 76 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 C 76 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY SEQRES 1 D 76 MET GLN ILE PHE VAL LYS THR LEU LYS GLY LYS THR ILE SEQRES 2 D 76 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 D 76 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 D 76 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 D 76 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 D 76 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY SEQRES 1 A 223 MET GLN LEU LYS PRO MET GLU ILE ASN PRO GLU MET LEU SEQRES 2 A 223 ASN LYS VAL LEU SER ARG LEU GLY VAL ALA GLY GLN TRP SEQRES 3 A 223 ARG PHE VAL ASP VAL LEU GLY LEU GLU GLU GLU SER LEU SEQRES 4 A 223 GLY SER VAL PRO ALA PRO ALA CYS ALA LEU LEU LEU LEU SEQRES 5 A 223 PHE PRO LEU THR ALA GLN HIS GLU ASN PHE ARG LYS LYS SEQRES 6 A 223 GLN ILE GLU GLU LEU LYS GLY GLN GLU VAL SER PRO LYS SEQRES 7 A 223 VAL TYR PHE MET LYS GLN THR ILE GLY ASN SER CYS GLY SEQRES 8 A 223 THR ILE GLY LEU ILE HIS ALA VAL ALA ASN ASN GLN ASP SEQRES 9 A 223 LYS LEU GLY PHE GLU ASP GLY SER VAL LEU LYS GLN PHE SEQRES 10 A 223 LEU SER GLU THR GLU LYS MET SER PRO GLU ASP ARG ALA SEQRES 11 A 223 LYS CYS PHE GLU LYS ASN GLU ALA ILE GLN ALA ALA HIS SEQRES 12 A 223 ASP ALA VAL ALA GLN GLU GLY GLN CYS ARG VAL ASP ASP SEQRES 13 A 223 LYS VAL ASN PHE HIS PHE ILE LEU PHE ASN ASN VAL ASP SEQRES 14 A 223 GLY HIS LEU TYR GLU LEU ASP GLY ARG MET PRO PHE PRO SEQRES 15 A 223 VAL ASN HIS GLY ALA SER SER GLU ASP THR LEU LEU LYS SEQRES 16 A 223 ASP ALA ALA LYS VAL CYS ARG GLU PHE THR GLU ARG GLU SEQRES 17 A 223 CYS GLY GLU VAL ARG PHE SER ALA VAL ALA LEU CYS LYS SEQRES 18 A 223 ALA ALA SEQRES 1 B 223 MET GLN LEU LYS PRO MET GLU ILE ASN PRO GLU MET LEU SEQRES 2 B 223 ASN LYS VAL LEU SER ARG LEU GLY VAL ALA GLY GLN TRP SEQRES 3 B 223 ARG PHE VAL ASP VAL LEU GLY LEU GLU GLU GLU SER LEU SEQRES 4 B 223 GLY SER VAL PRO ALA PRO ALA CYS ALA LEU LEU LEU LEU SEQRES 5 B 223 PHE PRO LEU THR ALA GLN HIS GLU ASN PHE ARG LYS LYS SEQRES 6 B 223 GLN ILE GLU GLU LEU LYS GLY GLN GLU VAL SER PRO LYS SEQRES 7 B 223 VAL TYR PHE MET LYS GLN THR ILE GLY ASN SER CYS GLY SEQRES 8 B 223 THR ILE GLY LEU ILE HIS ALA VAL ALA ASN ASN GLN ASP SEQRES 9 B 223 LYS LEU GLY PHE GLU ASP GLY SER VAL LEU LYS GLN PHE SEQRES 10 B 223 LEU SER GLU THR GLU LYS MET SER PRO GLU ASP ARG ALA SEQRES 11 B 223 LYS CYS PHE GLU LYS ASN GLU ALA ILE GLN ALA ALA HIS SEQRES 12 B 223 ASP ALA VAL ALA GLN GLU GLY GLN CYS ARG VAL ASP ASP SEQRES 13 B 223 LYS VAL ASN PHE HIS PHE ILE LEU PHE ASN ASN VAL ASP SEQRES 14 B 223 GLY HIS LEU TYR GLU LEU ASP GLY ARG MET PRO PHE PRO SEQRES 15 B 223 VAL ASN HIS GLY ALA SER SER GLU ASP THR LEU LEU LYS SEQRES 16 B 223 ASP ALA ALA LYS VAL CYS ARG GLU PHE THR GLU ARG GLU SEQRES 17 B 223 CYS GLY GLU VAL ARG PHE SER ALA VAL ALA LEU CYS LYS SEQRES 18 B 223 ALA ALA HET 6NA C 301 17 HET 6NA D 101 17 HETNAM 6NA HEXANOIC ACID FORMUL 5 6NA 2(C6 H12 O2) FORMUL 7 HOH *280(H2 O) HELIX 1 AA1 THR C 22 GLY C 35 1 14 HELIX 2 AA2 PRO C 37 ASP C 39 5 3 HELIX 3 AA3 THR C 55 ASN C 60 5 6 HELIX 4 AA4 THR D 22 GLY D 35 1 14 HELIX 5 AA5 PRO D 37 ASP D 39 5 3 HELIX 6 AA6 LEU D 56 ASN D 60 5 5 HELIX 7 AA7 ASN A 9 LEU A 20 1 12 HELIX 8 AA8 GLU A 35 GLY A 40 1 6 HELIX 9 AA9 THR A 56 LYS A 71 1 16 HELIX 10 AB1 SER A 89 ASN A 101 1 13 HELIX 11 AB2 SER A 112 GLU A 122 1 11 HELIX 12 AB3 SER A 125 ASN A 136 1 12 HELIX 13 AB4 ASN A 136 GLN A 148 1 13 HELIX 14 AB5 SER A 189 ASP A 191 5 3 HELIX 15 AB6 THR A 192 ARG A 207 1 16 HELIX 16 AB7 ASN B 9 LEU B 20 1 12 HELIX 17 AB8 GLU B 35 VAL B 42 5 8 HELIX 18 AB9 THR B 56 LYS B 71 1 16 HELIX 19 AC1 SER B 89 ASN B 101 1 13 HELIX 20 AC2 SER B 112 THR B 121 1 10 HELIX 21 AC3 SER B 125 LYS B 135 1 11 HELIX 22 AC4 ASN B 136 GLN B 148 1 13 HELIX 23 AC5 THR B 192 ARG B 207 1 16 SHEET 1 AA1 5 ILE C 13 GLU C 16 0 SHEET 2 AA1 5 GLN C 2 THR C 7 -1 N VAL C 5 O ILE C 13 SHEET 3 AA1 5 THR C 66 LEU C 71 1 O LEU C 67 N PHE C 4 SHEET 4 AA1 5 GLN C 41 PHE C 45 -1 N ARG C 42 O VAL C 70 SHEET 5 AA1 5 LYS C 48 GLN C 49 -1 O LYS C 48 N PHE C 45 SHEET 1 AA2 5 ILE D 13 GLU D 16 0 SHEET 2 AA2 5 GLN D 2 THR D 7 -1 N VAL D 5 O ILE D 13 SHEET 3 AA2 5 THR D 66 LEU D 71 1 O LEU D 67 N PHE D 4 SHEET 4 AA2 5 GLN D 41 PHE D 45 -1 N ARG D 42 O VAL D 70 SHEET 5 AA2 5 LYS D 48 GLN D 49 -1 O LYS D 48 N PHE D 45 SHEET 1 AA3 6 TRP A 26 ASP A 30 0 SHEET 2 AA3 6 SER A 215 LYS A 221 -1 O CYS A 220 N ARG A 27 SHEET 3 AA3 6 ALA A 48 PRO A 54 -1 N LEU A 52 O SER A 215 SHEET 4 AA3 6 PHE A 160 VAL A 168 -1 O HIS A 161 N PHE A 53 SHEET 5 AA3 6 HIS A 171 LEU A 175 -1 O TYR A 173 N ASN A 166 SHEET 6 AA3 6 VAL A 183 ALA A 187 -1 O HIS A 185 N LEU A 172 SHEET 1 AA4 2 VAL B 22 ALA B 23 0 SHEET 2 AA4 2 GLY B 107 PHE B 108 -1 O GLY B 107 N ALA B 23 SHEET 1 AA5 6 TRP B 26 ASP B 30 0 SHEET 2 AA5 6 SER B 215 LYS B 221 -1 O CYS B 220 N ARG B 27 SHEET 3 AA5 6 ALA B 46 PRO B 54 -1 N LEU B 52 O SER B 215 SHEET 4 AA5 6 PHE B 160 VAL B 168 -1 O PHE B 165 N LEU B 49 SHEET 5 AA5 6 HIS B 171 LEU B 175 -1 O LEU B 175 N LEU B 164 SHEET 6 AA5 6 VAL B 183 ALA B 187 -1 O HIS B 185 N LEU B 172 LINK NZ LYS C 9 C 6NA C 301 1555 1555 1.47 LINK C6 6NA C 301 SG CYS B 209 1555 1555 1.80 LINK NZ LYS D 9 C 6NA D 101 1555 1555 1.43 LINK C6 6NA D 101 SG CYS A 209 1555 1555 1.79 CISPEP 1 ALA A 44 PRO A 45 0 -1.30 CISPEP 2 ALA B 44 PRO B 45 0 -2.40 CRYST1 93.867 93.867 140.330 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010653 0.006151 0.000000 0.00000 SCALE2 0.000000 0.012301 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007126 0.00000 CONECT 76 4522 CONECT 681 4539 CONECT 2752 4544 CONECT 4418 4527 CONECT 4521 4522 4524 4528 4529 CONECT 4522 76 4521 4523 CONECT 4523 4522 CONECT 4524 4521 4525 4530 4531 CONECT 4525 4524 4526 4532 4533 CONECT 4526 4525 4527 4534 4535 CONECT 4527 4418 4526 4536 4537 CONECT 4528 4521 CONECT 4529 4521 CONECT 4530 4524 CONECT 4531 4524 CONECT 4532 4525 CONECT 4533 4525 CONECT 4534 4526 CONECT 4535 4526 CONECT 4536 4527 CONECT 4537 4527 CONECT 4538 4539 4541 4545 4546 CONECT 4539 681 4538 4540 CONECT 4540 4539 CONECT 4541 4538 4542 4547 4548 CONECT 4542 4541 4543 4549 4550 CONECT 4543 4542 4544 4551 4552 CONECT 4544 2752 4543 4553 4554 CONECT 4545 4538 CONECT 4546 4538 CONECT 4547 4541 CONECT 4548 4541 CONECT 4549 4542 CONECT 4550 4542 CONECT 4551 4543 CONECT 4552 4543 CONECT 4553 4544 CONECT 4554 4544 MASTER 338 0 2 23 24 0 0 6 4776 4 38 48 END