HEADER METAL BINDING PROTEIN 14-APR-25 9O71 TITLE HEXAMERIC RIESKE NON-HEME IRON DIOXYGENASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHENYLPROPIONATE DIOXYGENASE-LIKE RING-HYDROXYLATING COMPND 3 DIOXYGENASE LARGE TERMINAL SUBUNIT; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: AROMATIC-RING-HYDROXYLATING DIOXYGENASE BETA SUBUNIT; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VARIOVORAX PARADOXUS; SOURCE 3 ORGANISM_TAXID: 34073; SOURCE 4 GENE: J2W39_005219; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: VARIOVORAX PARADOXUS; SOURCE 9 ORGANISM_TAXID: 34073; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DIOXYGENASE, HETEROHEXAMER, METAL BINDING PROTEIN, AROMATIC COMPOUND KEYWDS 2 DEGRADATION EXPDTA X-RAY DIFFRACTION AUTHOR T.JIANG,M.J.KOZLOWSKI,P.D.JEFFREY,J.M.CONWAY REVDAT 1 20-MAY-26 9O71 0 JRNL AUTH T.JIANG,Y.SHEN,X.LI,M.J.KOZLOWSKI,P.D.JEFFREY,J.T.GROVES, JRNL AUTH 2 J.D.RABINOWITZ,J.M.CONWAY JRNL TITL COMPLETE CHARACTERIZATION OF THE INDOLE-3-ACETIC ACID (IAA) JRNL TITL 2 DEGRADATION PATHWAY IN VARIOVORAX AND EXPANDING ITS JRNL TITL 3 APPLICATION TO ROOT-ASSOCIATED BACTERIA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17_3644 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 165798 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.169 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 8305 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.7800 - 3.9800 1.00 5265 267 0.1355 0.1514 REMARK 3 2 3.9700 - 3.1600 1.00 5238 284 0.1299 0.1483 REMARK 3 3 3.1600 - 2.7600 1.00 5226 278 0.1436 0.1831 REMARK 3 4 2.7600 - 2.5100 1.00 5251 274 0.1403 0.1497 REMARK 3 5 2.5000 - 2.3300 1.00 5323 259 0.1339 0.1614 REMARK 3 6 2.3300 - 2.1900 1.00 5231 268 0.1363 0.1480 REMARK 3 7 2.1900 - 2.0800 1.00 5254 287 0.1357 0.1395 REMARK 3 8 2.0800 - 1.9900 1.00 5222 300 0.1378 0.1471 REMARK 3 9 1.9900 - 1.9100 1.00 5256 250 0.1419 0.1611 REMARK 3 10 1.9100 - 1.8500 1.00 5271 285 0.1413 0.1553 REMARK 3 11 1.8500 - 1.7900 1.00 5239 287 0.1399 0.1662 REMARK 3 12 1.7900 - 1.7400 1.00 5275 250 0.1430 0.1581 REMARK 3 13 1.7400 - 1.6900 1.00 5233 318 0.1429 0.1537 REMARK 3 14 1.6900 - 1.6500 1.00 5180 269 0.1483 0.1679 REMARK 3 15 1.6500 - 1.6100 1.00 5269 322 0.1547 0.1797 REMARK 3 16 1.6100 - 1.5800 1.00 5221 293 0.1564 0.1696 REMARK 3 17 1.5800 - 1.5500 1.00 5239 288 0.1675 0.1921 REMARK 3 18 1.5500 - 1.5200 1.00 5267 248 0.1731 0.1941 REMARK 3 19 1.5200 - 1.4900 1.00 5292 263 0.1832 0.2064 REMARK 3 20 1.4900 - 1.4700 1.00 5225 262 0.1994 0.2148 REMARK 3 21 1.4700 - 1.4400 1.00 5293 271 0.2057 0.2308 REMARK 3 22 1.4400 - 1.4200 1.00 5224 282 0.2119 0.2324 REMARK 3 23 1.4200 - 1.4000 1.00 5232 290 0.2235 0.2222 REMARK 3 24 1.4000 - 1.3800 1.00 5241 276 0.2374 0.2348 REMARK 3 25 1.3800 - 1.3600 1.00 5268 290 0.2459 0.2416 REMARK 3 26 1.3600 - 1.3400 1.00 5259 263 0.2520 0.2957 REMARK 3 27 1.3400 - 1.3300 1.00 5266 276 0.2602 0.2674 REMARK 3 28 1.3300 - 1.3100 1.00 5178 272 0.2692 0.2875 REMARK 3 29 1.3100 - 1.2900 1.00 5326 260 0.2911 0.3194 REMARK 3 30 1.2900 - 1.2800 1.00 5229 273 0.2993 0.3127 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.131 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.694 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5140 REMARK 3 ANGLE : 1.119 7008 REMARK 3 CHIRALITY : 0.082 736 REMARK 3 PLANARITY : 0.008 934 REMARK 3 DIHEDRAL : 20.747 1961 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9O71 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-APR-25. REMARK 100 THE DEPOSITION ID IS D_1000294896. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JAN-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 165805 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.280 REMARK 200 RESOLUTION RANGE LOW (A) : 33.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 1.52000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE (PH 5.5), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 65.24150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.66720 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.78200 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 65.24150 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 37.66720 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.78200 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 65.24150 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 37.66720 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.78200 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 75.33440 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 67.56400 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 75.33440 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 67.56400 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 75.33440 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 67.56400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 25040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 64580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -175.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 404 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 547 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLY B 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 280 CG ND1 CD2 CE1 NE2 REMARK 470 TYR A 283 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 37 -84.38 -120.70 REMARK 500 HIS A 87 -87.50 -82.70 REMARK 500 VAL A 219 -64.49 -106.26 REMARK 500 LYS A 322 -120.31 -96.67 REMARK 500 TYR B 59 76.51 -155.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1128 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A1129 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH B 547 DISTANCE = 6.96 ANGSTROMS REMARK 525 HOH B 548 DISTANCE = 7.11 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 501 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 85 SG REMARK 620 2 FES A 501 S1 113.7 REMARK 620 3 FES A 501 S2 108.6 106.9 REMARK 620 4 CYS A 106 SG 108.7 112.2 106.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 501 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 87 ND1 REMARK 620 2 FES A 501 S1 112.8 REMARK 620 3 FES A 501 S2 113.8 105.5 REMARK 620 4 HIS A 109 ND1 95.9 115.5 113.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 502 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 216 NE2 REMARK 620 2 HIS A 221 NE2 110.1 REMARK 620 3 ASP A 377 OD1 82.8 86.6 REMARK 620 4 ASP A 377 OD2 119.5 105.6 52.3 REMARK 620 5 HOH A 996 O 105.3 114.1 152.3 102.3 REMARK 620 N 1 2 3 4 DBREF1 9O71 A 1 437 UNP A0AAW8EQ13_VARPD DBREF2 9O71 A A0AAW8EQ13 1 437 DBREF 9O71 B 1 162 UNP C5CSP7 C5CSP7_VARPS 1 162 SEQADV 9O71 HIS A -15 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 HIS A -14 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 HIS A -13 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 HIS A -12 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 HIS A -11 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 HIS A -10 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 SER A -9 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 SER A -8 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 GLY A -7 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 LEU A -6 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 VAL A -5 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 PRO A -4 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 ARG A -3 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 GLY A -2 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 SER A -1 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 HIS A 0 UNP A0AAW8EQ1 EXPRESSION TAG SEQADV 9O71 ASN A 94 UNP A0AAW8EQ1 SER 94 ENGINEERED MUTATION SEQADV 9O71 GLY A 165 UNP A0AAW8EQ1 ASP 165 ENGINEERED MUTATION SEQADV 9O71 GLN B 97 UNP C5CSP7 THR 97 ENGINEERED MUTATION SEQADV 9O71 VAL B 106 UNP C5CSP7 ALA 106 ENGINEERED MUTATION SEQADV 9O71 LEU B 107 UNP C5CSP7 VAL 107 ENGINEERED MUTATION SEQADV 9O71 ARG B 135 UNP C5CSP7 GLN 135 ENGINEERED MUTATION SEQRES 1 A 453 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 A 453 GLY SER HIS MET THR SER TYR ARG ASP ASN PRO ASP ALA SEQRES 3 A 453 ILE ARG ALA LEU VAL GLN ASP ASP ARG VAL HIS ARG ASP SEQRES 4 A 453 LEU TYR THR SER GLN GLU LEU PHE GLU LEU GLU GLN GLU SEQRES 5 A 453 HIS PHE PHE ALA ASN THR TRP ASN TYR VAL GLY HIS GLU SEQRES 6 A 453 SER GLN LEU PRO LYS PRO GLY ASP TRP ILE SER ASN GLU SEQRES 7 A 453 ILE ALA GLY ARG PRO LEU ILE VAL VAL ARG HIS SER ASP SEQRES 8 A 453 GLY SER VAL ARG ALA MET MET ASN ARG CYS ALA HIS LYS SEQRES 9 A 453 GLY SER ARG LEU VAL ASN GLY PRO CYS GLY ASN THR GLY SEQRES 10 A 453 LYS PHE PHE ARG CYS PRO TYR HIS ALA TRP THR PHE LYS SEQRES 11 A 453 THR ASP GLY SER LEU LEU ALA ILE PRO LEU LYS THR GLY SEQRES 12 A 453 TYR GLU ASN THR ALA LEU HIS ALA CYS GLU SER ALA LYS SEQRES 13 A 453 GLY LEU THR THR LEU LYS HIS VAL ARG SER HIS ARG GLY SEQRES 14 A 453 PHE ILE PHE VAL LYS ILE SER ASP ALA GLY PRO GLY PHE SEQRES 15 A 453 ASP ASP TYR PHE GLY ASP SER LEU SER SER ILE ASP ASN SEQRES 16 A 453 MET ALA ASP ARG SER PRO GLU GLY GLU LEU GLU ILE ALA SEQRES 17 A 453 GLY GLY CYS LEU ARG PHE MET HIS GLN CYS ASN TRP LYS SEQRES 18 A 453 MET PHE VAL GLU ASN LEU ASN ASP THR MET HIS PRO MET SEQRES 19 A 453 VAL ALA HIS GLU SER SER ALA GLY THR ALA LYS ARG MET SEQRES 20 A 453 TRP ALA ASP LYS PRO GLU ASP GLU PRO LYS PRO MET ALA SEQRES 21 A 453 VAL GLU GLN PHE ALA PRO PHE MET SER ASP TYR LYS PHE SEQRES 22 A 453 PHE GLU ASP MET GLY ILE ARG THR TYR ASP ASN GLY HIS SEQRES 23 A 453 SER PHE THR GLY VAL HIS PHE SER ILE HIS SER LYS TYR SEQRES 24 A 453 LYS ALA ILE PRO ALA TYR ASP ASP ALA MET LYS ALA ARG SEQRES 25 A 453 TYR GLY GLU GLU LYS THR ALA GLN ILE LEU GLY MET ALA SEQRES 26 A 453 ARG HIS ASN THR VAL TYR TYR PRO ASN LEU THR ILE LYS SEQRES 27 A 453 GLY ALA ILE GLN ALA ILE ARG VAL VAL LYS PRO ILE SER SEQRES 28 A 453 ALA ASP ARG THR LEU ILE GLU SER TRP THR PHE ARG LEU SEQRES 29 A 453 LYS GLY ALA PRO PRO GLU LEU LEU GLN ARG THR THR MET SEQRES 30 A 453 TYR ASN ARG LEU ILE ASN SER PRO PHE SER VAL VAL GLY SEQRES 31 A 453 HIS ASP ASP LEU GLN ALA TYR ARG GLY MET GLN ALA GLY SEQRES 32 A 453 LEU HIS ALA SER GLY ASN GLU TRP VAL SER LEU HIS ARG SEQRES 33 A 453 ASN TYR ASP PRO ALA GLU LEU LYS GLY GLY GLU ILE THR SEQRES 34 A 453 THR GLY GLY THR ASN GLU LEU PRO MET ARG ASN GLN TYR SEQRES 35 A 453 ARG ALA TRP VAL GLN ARG MET THR GLU THR MET SEQRES 1 B 162 MET ALA GLY THR GLU VAL THR ARG GLN ASP LEU ILE ASP SEQRES 2 B 162 PHE VAL VAL ASN GLU ALA HIS LEU LEU ASP THR ARG ARG SEQRES 3 B 162 TYR GLU GLU TRP ASN ALA LEU PHE THR ASP ASP ALA PHE SEQRES 4 B 162 TYR TRP VAL PRO LEU VAL PRO ASP GLN GLU ASP GLY LEU SEQRES 5 B 162 ASN HIS THR SER HIS LEU TYR GLU ASP LYS LEU LEU ARG SEQRES 6 B 162 GLU LEU ARG ILE GLU ARG LEU LYS SER PRO ARG ALA PHE SEQRES 7 B 162 SER GLN GLN PRO PRO SER ARG CYS HIS HIS LEU LEU GLN SEQRES 8 B 162 VAL PRO VAL VAL GLU GLN PHE ASP ALA GLU GLY ASN ARG SEQRES 9 B 162 PHE VAL LEU ARG THR GLY PHE HIS TYR THR GLU SER GLN SEQRES 10 B 162 GLY ASP GLU LEU GLN PHE TYR VAL GLY THR PHE PHE HIS SEQRES 11 B 162 HIS LEU THR VAL ARG ASP GLY ALA LEU ARG MET THR LEU SEQRES 12 B 162 LYS ARG VAL ASN LEU LEU ASN CYS ASP ALA ALA LEU PRO SEQRES 13 B 162 ALA VAL GLN LEU PHE ILE HET FES A 501 4 HET FE2 A 502 1 HET EDO B 201 10 HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM FE2 FE (II) ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 FES FE2 S2 FORMUL 4 FE2 FE 2+ FORMUL 5 EDO C2 H6 O2 FORMUL 6 HOH *777(H2 O) HELIX 1 AA1 ASN A 7 ALA A 13 1 7 HELIX 2 AA2 ARG A 22 SER A 27 1 6 HELIX 3 AA3 SER A 27 HIS A 37 1 11 HELIX 4 AA4 PHE A 38 ASN A 41 5 4 HELIX 5 AA5 SER A 50 LEU A 52 5 3 HELIX 6 AA6 LEU A 124 GLU A 129 5 6 HELIX 7 AA7 ALA A 132 GLY A 141 5 10 HELIX 8 AA8 GLY A 165 GLY A 171 1 7 HELIX 9 AA9 LEU A 174 ARG A 183 1 10 HELIX 10 AB1 ASN A 203 LEU A 211 1 9 HELIX 11 AB2 HIS A 216 HIS A 221 1 6 HELIX 12 AB3 HIS A 221 ALA A 233 1 13 HELIX 13 AB4 PRO A 242 ALA A 249 1 8 HELIX 14 AB5 PRO A 250 SER A 253 5 4 HELIX 15 AB6 ASP A 254 GLY A 262 1 9 HELIX 16 AB7 ASP A 267 GLY A 269 5 3 HELIX 17 AB8 ILE A 286 GLY A 298 1 13 HELIX 18 AB9 GLY A 298 MET A 308 1 11 HELIX 19 AC1 PRO A 353 SER A 368 1 16 HELIX 20 AC2 SER A 371 LEU A 388 1 18 HELIX 21 AC3 ASP A 403 LEU A 407 5 5 HELIX 22 AC4 GLU A 419 GLU A 435 1 17 HELIX 23 AC5 THR B 7 THR B 24 1 18 HELIX 24 AC6 ARG B 26 LEU B 33 1 8 HELIX 25 AC7 ASP B 61 LEU B 72 1 12 HELIX 26 AC8 ALA B 77 GLN B 81 5 5 SHEET 1 AA1 2 ARG A 19 HIS A 21 0 SHEET 2 AA1 2 TRP A 395 SER A 397 -1 O VAL A 396 N VAL A 20 SHEET 1 AA2 3 ASN A 44 HIS A 48 0 SHEET 2 AA2 3 PHE A 154 LYS A 158 -1 O ILE A 155 N GLY A 47 SHEET 3 AA2 3 HIS A 147 HIS A 151 -1 N ARG A 149 O PHE A 156 SHEET 1 AA3 4 VAL A 78 MET A 82 0 SHEET 2 AA3 4 ARG A 66 ARG A 72 -1 N ILE A 69 O MET A 81 SHEET 3 AA3 4 ASP A 57 ILE A 63 -1 N ASN A 61 O LEU A 68 SHEET 4 AA3 4 CYS A 97 ASN A 99 -1 O GLY A 98 N TRP A 58 SHEET 1 AA4 3 PHE A 103 ARG A 105 0 SHEET 2 AA4 3 THR A 112 LYS A 114 -1 O PHE A 113 N PHE A 104 SHEET 3 AA4 3 LEU A 119 ALA A 121 -1 O LEU A 120 N THR A 112 SHEET 1 AA5 3 LEU A 189 ILE A 191 0 SHEET 2 AA5 3 ARG A 338 LEU A 348 -1 O ARG A 347 N GLU A 190 SHEET 3 AA5 3 LEU A 196 HIS A 200 -1 N HIS A 200 O THR A 339 SHEET 1 AA6 8 LEU A 189 ILE A 191 0 SHEET 2 AA6 8 ARG A 338 LEU A 348 -1 O ARG A 347 N GLU A 190 SHEET 3 AA6 8 ALA A 327 SER A 335 -1 N LYS A 332 O LEU A 340 SHEET 4 AA6 8 LEU A 319 ILE A 321 -1 N THR A 320 O ARG A 329 SHEET 5 AA6 8 ASN A 312 TYR A 315 -1 N TYR A 315 O LEU A 319 SHEET 6 AA6 8 SER A 271 THR A 273 -1 N SER A 271 O VAL A 314 SHEET 7 AA6 8 ILE A 263 THR A 265 -1 N ARG A 264 O PHE A 272 SHEET 8 AA6 8 ILE A 412 THR A 414 -1 O THR A 414 N ILE A 263 SHEET 1 AA7 6 SER B 56 GLU B 60 0 SHEET 2 AA7 6 PHE B 34 PRO B 43 -1 N TYR B 40 O GLU B 60 SHEET 3 AA7 6 ALA B 138 LEU B 148 1 O LYS B 144 N TRP B 41 SHEET 4 AA7 6 GLU B 120 ARG B 135 -1 N ARG B 135 O ALA B 138 SHEET 5 AA7 6 ARG B 104 GLN B 117 -1 N TYR B 113 O TYR B 124 SHEET 6 AA7 6 ARG B 85 LEU B 90 -1 N ARG B 85 O SER B 116 SHEET 1 AA8 6 SER B 56 GLU B 60 0 SHEET 2 AA8 6 PHE B 34 PRO B 43 -1 N TYR B 40 O GLU B 60 SHEET 3 AA8 6 ALA B 138 LEU B 148 1 O LYS B 144 N TRP B 41 SHEET 4 AA8 6 GLU B 120 ARG B 135 -1 N ARG B 135 O ALA B 138 SHEET 5 AA8 6 ARG B 104 GLN B 117 -1 N TYR B 113 O TYR B 124 SHEET 6 AA8 6 VAL B 94 ASP B 99 -1 N VAL B 94 O ARG B 108 LINK SG CYS A 85 FE1 FES A 501 1555 1555 2.32 LINK ND1 HIS A 87 FE2 FES A 501 1555 1555 2.13 LINK SG CYS A 106 FE1 FES A 501 1555 1555 2.30 LINK ND1 HIS A 109 FE2 FES A 501 1555 1555 2.09 LINK NE2 HIS A 216 FE FE2 A 502 1555 1555 2.04 LINK NE2 HIS A 221 FE FE2 A 502 1555 1555 2.01 LINK OD1 ASP A 377 FE FE2 A 502 1555 1555 2.73 LINK OD2 ASP A 377 FE FE2 A 502 1555 1555 1.98 LINK FE FE2 A 502 O HOH A 996 1555 1555 2.32 CISPEP 1 TYR A 316 PRO A 317 0 6.99 CISPEP 2 GLN B 81 PRO B 82 0 2.09 CRYST1 130.483 130.483 101.346 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007664 0.004425 0.000000 0.00000 SCALE2 0.000000 0.008849 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009867 0.00000 CONECT 1395 9816 CONECT 1416 9817 CONECT 1704 9816 CONECT 1750 9817 CONECT 3458 9820 CONECT 3531 9820 CONECT 6098 9820 CONECT 6099 9820 CONECT 9816 1395 1704 9818 9819 CONECT 9817 1416 1750 9818 9819 CONECT 9818 9816 9817 CONECT 9819 9816 9817 CONECT 9820 3458 3531 6098 6099 CONECT 982010226 CONECT 9821 9822 9823 9825 9826 CONECT 9822 9821 9827 CONECT 9823 9821 9824 9828 9829 CONECT 9824 9823 9830 CONECT 9825 9821 CONECT 9826 9821 CONECT 9827 9822 CONECT 9828 9823 CONECT 9829 9823 CONECT 9830 9824 CONECT10226 9820 MASTER 362 0 3 26 35 0 0 6 5568 2 25 48 END