data_9P9Y # _entry.id 9P9Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.417 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9P9Y pdb_00009p9y 10.2210/pdb9p9y/pdb WWPDB D_1000297047 ? ? BMRB 31253 ? 10.13018/BMR31253 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-08-26 ? 2 'Structure model' 1 1 2026-09-16 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.pdbx_database_id_DOI' 8 2 'Structure model' '_citation.pdbx_database_id_PubMed' 9 2 'Structure model' '_citation.title' 10 2 'Structure model' '_citation.year' 11 2 'Structure model' '_citation_author.identifier_ORCID' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 9P9Y _pdbx_database_status.recvd_initial_deposition_date 2025-06-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs . _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution structure of the major PDGFRB promoter G-quadruplex with a broken-strand G21 fill-in' _pdbx_database_related.db_id 31253 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 3 _pdbx_contact_author.email yangdz@purdue.edu _pdbx_contact_author.name_first Danzhou _pdbx_contact_author.name_last Yang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7489-7111 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Han, Y.' 1 0000-0002-1034-2958 'Dickerhoff, J.' 2 0000-0002-3197-9472 'Yang, D.' 3 0000-0001-7489-7111 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 54 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Structures and dynamics of the major G-quadruplex in the human PDGFR-beta gene promoter: insights into vacancy G-quadruplex formation. ; _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkag843 _citation.pdbx_database_id_PubMed 42695283 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Han, Y.' 1 ? primary 'Dickerhoff, J.' 2 0000-0002-3197-9472 primary 'Yang, D.' 3 0000-0001-7489-7111 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA (5'-D(*AP*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*CP*AP*GP*G)-3') ; _entity.formula_weight 6684.297 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DA)(DA)(DG)(DG)(DG)(DA)(DG)(DG)(DG)(DC)(DG)(DG)(DC)(DG)(DG)(DG)(DG)(DC)(DA)(DG) (DG) ; _entity_poly.pdbx_seq_one_letter_code_can AAGGGAGGGCGGCGGGGCAGG _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DA n 1 3 DG n 1 4 DG n 1 5 DG n 1 6 DA n 1 7 DG n 1 8 DG n 1 9 DG n 1 10 DC n 1 11 DG n 1 12 DG n 1 13 DC n 1 14 DG n 1 15 DG n 1 16 DG n 1 17 DG n 1 18 DC n 1 19 DA n 1 20 DG n 1 21 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 21 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA DA X . n A 1 2 DA 2 2 2 DA DA X . n A 1 3 DG 3 3 3 DG DG X . n A 1 4 DG 4 4 4 DG DG X . n A 1 5 DG 5 5 5 DG DG X . n A 1 6 DA 6 6 6 DA DA X . n A 1 7 DG 7 7 7 DG DG X . n A 1 8 DG 8 8 8 DG DG X . n A 1 9 DG 9 9 9 DG DG X . n A 1 10 DC 10 10 10 DC DC X . n A 1 11 DG 11 11 11 DG DG X . n A 1 12 DG 12 12 12 DG DG X . n A 1 13 DC 13 13 13 DC DC X . n A 1 14 DG 14 14 14 DG DG X . n A 1 15 DG 15 15 15 DG DG X . n A 1 16 DG 16 16 16 DG DG X . n A 1 17 DG 17 17 17 DG DG X . n A 1 18 DC 18 18 18 DC DC X . n A 1 19 DA 19 19 19 DA DA X . n A 1 20 DG 20 20 20 DG DG X . n A 1 21 DG 21 21 21 DG DG X . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9P9Y _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 9P9Y _struct.title 'Solution structure of the major PDGFRB promoter G-quadruplex with a broken-strand G21 fill-in' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9P9Y _struct_keywords.text 'G-quadruplex DNA, PDGFRB, DNA' _struct_keywords.pdbx_keywords DNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9P9Y _struct_ref.pdbx_db_accession 9P9Y _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9P9Y _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 21 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 9P9Y _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 21 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 21 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 7 O6 ? ? X DG 3 X DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 7 N7 ? ? X DG 3 X DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 14 N2 ? ? X DG 3 X DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 14 N1 ? ? X DG 3 X DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 8 O6 ? ? X DG 4 X DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 8 N7 ? ? X DG 4 X DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 4 N7 ? ? ? 1_555 A DG 15 N2 ? ? X DG 4 X DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DG 15 N1 ? ? X DG 4 X DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DG 9 O6 ? ? X DG 5 X DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DG 9 N7 ? ? X DG 5 X DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 5 N7 ? ? ? 1_555 A DG 16 N2 ? ? X DG 5 X DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DG 16 N1 ? ? X DG 5 X DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DG 11 O6 ? ? X DG 7 X DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DG 11 N7 ? ? X DG 7 X DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DG 12 O6 ? ? X DG 8 X DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 12 N7 ? ? X DG 8 X DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 21 O6 ? ? X DG 9 X DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 21 N7 ? ? X DG 9 X DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 11 N1 ? ? ? 1_555 A DG 14 O6 ? ? X DG 11 X DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 11 N2 ? ? ? 1_555 A DG 14 N7 ? ? X DG 11 X DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 12 N1 ? ? ? 1_555 A DG 15 O6 ? ? X DG 12 X DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 12 N2 ? ? ? 1_555 A DG 15 N7 ? ? X DG 12 X DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 16 N7 ? ? ? 1_555 A DG 21 N2 ? ? X DG 16 X DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 16 O6 ? ? ? 1_555 A DG 21 N1 ? ? X DG 16 X DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 17 N1 ? ? ? 1_555 A DG 20 N7 ? ? X DG 17 X DG 20 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog26 hydrog ? ? A DG 17 N2 ? ? ? 1_555 A DG 20 O6 ? ? X DG 17 X DG 20 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 9P9Y _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" X DA 1 ? ? "C1'" X DA 1 ? ? N9 X DA 1 ? ? 112.56 108.30 4.26 0.30 N 2 1 C4 X DA 1 ? ? C5 X DA 1 ? ? C6 X DA 1 ? ? 113.78 117.00 -3.22 0.50 N 3 1 C5 X DA 1 ? ? C6 X DA 1 ? ? N1 X DA 1 ? ? 121.65 117.70 3.95 0.50 N 4 1 N1 X DA 1 ? ? C6 X DA 1 ? ? N6 X DA 1 ? ? 112.96 118.60 -5.64 0.60 N 5 1 C4 X DA 2 ? ? C5 X DA 2 ? ? C6 X DA 2 ? ? 113.42 117.00 -3.58 0.50 N 6 1 C5 X DA 2 ? ? C6 X DA 2 ? ? N1 X DA 2 ? ? 121.40 117.70 3.70 0.50 N 7 1 N1 X DA 2 ? ? C6 X DA 2 ? ? N6 X DA 2 ? ? 112.72 118.60 -5.88 0.60 N 8 1 "O4'" X DG 3 ? ? "C1'" X DG 3 ? ? N9 X DG 3 ? ? 110.79 108.30 2.49 0.30 N 9 1 "O4'" X DG 4 ? ? "C1'" X DG 4 ? ? N9 X DG 4 ? ? 111.97 108.30 3.67 0.30 N 10 1 "O4'" X DG 5 ? ? "C1'" X DG 5 ? ? N9 X DG 5 ? ? 110.59 108.30 2.29 0.30 N 11 1 C4 X DA 6 ? ? C5 X DA 6 ? ? C6 X DA 6 ? ? 113.68 117.00 -3.32 0.50 N 12 1 C5 X DA 6 ? ? C6 X DA 6 ? ? N1 X DA 6 ? ? 121.47 117.70 3.77 0.50 N 13 1 N1 X DA 6 ? ? C6 X DA 6 ? ? N6 X DA 6 ? ? 112.98 118.60 -5.62 0.60 N 14 1 "O4'" X DG 7 ? ? "C1'" X DG 7 ? ? N9 X DG 7 ? ? 110.82 108.30 2.52 0.30 N 15 1 "O4'" X DG 8 ? ? "C1'" X DG 8 ? ? N9 X DG 8 ? ? 113.32 108.30 5.02 0.30 N 16 1 "O4'" X DG 9 ? ? "C1'" X DG 9 ? ? N9 X DG 9 ? ? 110.85 108.30 2.55 0.30 N 17 1 "O4'" X DC 10 ? ? "C1'" X DC 10 ? ? N1 X DC 10 ? ? 110.36 108.30 2.06 0.30 N 18 1 N3 X DC 10 ? ? C2 X DC 10 ? ? O2 X DC 10 ? ? 117.07 121.90 -4.83 0.70 N 19 1 "O4'" X DG 11 ? ? "C1'" X DG 11 ? ? N9 X DG 11 ? ? 110.46 108.30 2.16 0.30 N 20 1 "O4'" X DG 12 ? ? "C1'" X DG 12 ? ? N9 X DG 12 ? ? 111.03 108.30 2.73 0.30 N 21 1 "O4'" X DC 13 ? ? "C1'" X DC 13 ? ? N1 X DC 13 ? ? 110.69 108.30 2.39 0.30 N 22 1 N3 X DC 13 ? ? C2 X DC 13 ? ? O2 X DC 13 ? ? 117.20 121.90 -4.70 0.70 N 23 1 "O4'" X DG 14 ? ? "C1'" X DG 14 ? ? N9 X DG 14 ? ? 111.40 108.30 3.10 0.30 N 24 1 "O4'" X DG 15 ? ? "C1'" X DG 15 ? ? N9 X DG 15 ? ? 111.94 108.30 3.64 0.30 N 25 1 "O4'" X DG 16 ? ? "C1'" X DG 16 ? ? N9 X DG 16 ? ? 110.32 108.30 2.02 0.30 N 26 1 "O4'" X DG 17 ? ? "C1'" X DG 17 ? ? N9 X DG 17 ? ? 111.18 108.30 2.88 0.30 N 27 1 "O4'" X DC 18 ? ? "C1'" X DC 18 ? ? N1 X DC 18 ? ? 110.34 108.30 2.04 0.30 N 28 1 N3 X DC 18 ? ? C2 X DC 18 ? ? O2 X DC 18 ? ? 117.22 121.90 -4.68 0.70 N 29 1 C4 X DA 19 ? ? C5 X DA 19 ? ? C6 X DA 19 ? ? 113.42 117.00 -3.58 0.50 N 30 1 C5 X DA 19 ? ? C6 X DA 19 ? ? N1 X DA 19 ? ? 121.71 117.70 4.01 0.50 N 31 1 N1 X DA 19 ? ? C6 X DA 19 ? ? N6 X DA 19 ? ? 112.34 118.60 -6.26 0.60 N 32 1 "O4'" X DG 20 ? ? "C1'" X DG 20 ? ? N9 X DG 20 ? ? 111.72 108.30 3.42 0.30 N 33 2 "O4'" X DA 1 ? ? "C1'" X DA 1 ? ? N9 X DA 1 ? ? 112.74 108.30 4.44 0.30 N 34 2 C4 X DA 1 ? ? C5 X DA 1 ? ? C6 X DA 1 ? ? 113.90 117.00 -3.10 0.50 N 35 2 C5 X DA 1 ? ? C6 X DA 1 ? ? N1 X DA 1 ? ? 121.58 117.70 3.88 0.50 N 36 2 N1 X DA 1 ? ? C6 X DA 1 ? ? N6 X DA 1 ? ? 112.99 118.60 -5.61 0.60 N 37 2 C4 X DA 2 ? ? C5 X DA 2 ? ? C6 X DA 2 ? ? 113.42 117.00 -3.58 0.50 N 38 2 C5 X DA 2 ? ? C6 X DA 2 ? ? N1 X DA 2 ? ? 121.43 117.70 3.73 0.50 N 39 2 N1 X DA 2 ? ? C6 X DA 2 ? ? N6 X DA 2 ? ? 112.77 118.60 -5.83 0.60 N 40 2 "O4'" X DG 3 ? ? "C1'" X DG 3 ? ? N9 X DG 3 ? ? 110.63 108.30 2.33 0.30 N 41 2 "O4'" X DG 4 ? ? "C1'" X DG 4 ? ? N9 X DG 4 ? ? 112.87 108.30 4.57 0.30 N 42 2 "O4'" X DG 5 ? ? "C1'" X DG 5 ? ? N9 X DG 5 ? ? 111.01 108.30 2.71 0.30 N 43 2 C4 X DA 6 ? ? C5 X DA 6 ? ? C6 X DA 6 ? ? 113.70 117.00 -3.30 0.50 N 44 2 C5 X DA 6 ? ? C6 X DA 6 ? ? N1 X DA 6 ? ? 121.47 117.70 3.77 0.50 N 45 2 N1 X DA 6 ? ? C6 X DA 6 ? ? N6 X DA 6 ? ? 113.00 118.60 -5.60 0.60 N 46 2 "O4'" X DG 7 ? ? "C1'" X DG 7 ? ? N9 X DG 7 ? ? 110.78 108.30 2.48 0.30 N 47 2 "O4'" X DG 8 ? ? "C1'" X DG 8 ? ? N9 X DG 8 ? ? 113.33 108.30 5.03 0.30 N 48 2 "O4'" X DG 9 ? ? "C1'" X DG 9 ? ? N9 X DG 9 ? ? 110.94 108.30 2.64 0.30 N 49 2 N3 X DC 10 ? ? C2 X DC 10 ? ? O2 X DC 10 ? ? 117.11 121.90 -4.79 0.70 N 50 2 "O4'" X DG 11 ? ? "C1'" X DG 11 ? ? N9 X DG 11 ? ? 110.18 108.30 1.88 0.30 N 51 2 "O4'" X DG 12 ? ? "C1'" X DG 12 ? ? N9 X DG 12 ? ? 112.80 108.30 4.50 0.30 N 52 2 N3 X DC 13 ? ? C2 X DC 13 ? ? O2 X DC 13 ? ? 117.21 121.90 -4.69 0.70 N 53 2 "O4'" X DG 14 ? ? "C1'" X DG 14 ? ? N9 X DG 14 ? ? 112.14 108.30 3.84 0.30 N 54 2 "O4'" X DG 15 ? ? "C1'" X DG 15 ? ? N9 X DG 15 ? ? 113.19 108.30 4.89 0.30 N 55 2 "O4'" X DG 17 ? ? "C1'" X DG 17 ? ? N9 X DG 17 ? ? 111.04 108.30 2.74 0.30 N 56 2 "O4'" X DC 18 ? ? "C1'" X DC 18 ? ? N1 X DC 18 ? ? 110.64 108.30 2.34 0.30 N 57 2 N3 X DC 18 ? ? C2 X DC 18 ? ? O2 X DC 18 ? ? 117.31 121.90 -4.59 0.70 N 58 2 C4 X DA 19 ? ? C5 X DA 19 ? ? C6 X DA 19 ? ? 113.42 117.00 -3.58 0.50 N 59 2 C5 X DA 19 ? ? C6 X DA 19 ? ? N1 X DA 19 ? ? 121.81 117.70 4.11 0.50 N 60 2 N1 X DA 19 ? ? C6 X DA 19 ? ? N6 X DA 19 ? ? 112.26 118.60 -6.34 0.60 N 61 2 "O4'" X DG 20 ? ? "C1'" X DG 20 ? ? N9 X DG 20 ? ? 110.41 108.30 2.11 0.30 N 62 2 "C3'" X DG 20 ? ? "O3'" X DG 20 ? ? P X DG 21 ? ? 127.06 119.70 7.36 1.20 Y 63 3 "O4'" X DA 1 ? ? "C1'" X DA 1 ? ? N9 X DA 1 ? ? 112.71 108.30 4.41 0.30 N 64 3 C4 X DA 1 ? ? C5 X DA 1 ? ? C6 X DA 1 ? ? 113.87 117.00 -3.13 0.50 N 65 3 C5 X DA 1 ? ? C6 X DA 1 ? ? N1 X DA 1 ? ? 121.54 117.70 3.84 0.50 N 66 3 N1 X DA 1 ? ? C6 X DA 1 ? ? N6 X DA 1 ? ? 113.04 118.60 -5.56 0.60 N 67 3 C4 X DA 2 ? ? C5 X DA 2 ? ? C6 X DA 2 ? ? 113.40 117.00 -3.60 0.50 N 68 3 C5 X DA 2 ? ? C6 X DA 2 ? ? N1 X DA 2 ? ? 121.37 117.70 3.67 0.50 N 69 3 N1 X DA 2 ? ? C6 X DA 2 ? ? N6 X DA 2 ? ? 112.84 118.60 -5.76 0.60 N 70 3 "O4'" X DG 3 ? ? "C1'" X DG 3 ? ? N9 X DG 3 ? ? 110.69 108.30 2.39 0.30 N 71 3 "O4'" X DG 4 ? ? "C1'" X DG 4 ? ? N9 X DG 4 ? ? 112.21 108.30 3.91 0.30 N 72 3 "O4'" X DG 5 ? ? "C1'" X DG 5 ? ? N9 X DG 5 ? ? 110.68 108.30 2.38 0.30 N 73 3 C4 X DA 6 ? ? C5 X DA 6 ? ? C6 X DA 6 ? ? 113.67 117.00 -3.33 0.50 N 74 3 C5 X DA 6 ? ? C6 X DA 6 ? ? N1 X DA 6 ? ? 121.51 117.70 3.81 0.50 N 75 3 N1 X DA 6 ? ? C6 X DA 6 ? ? N6 X DA 6 ? ? 113.00 118.60 -5.60 0.60 N 76 3 "O4'" X DG 7 ? ? "C1'" X DG 7 ? ? N9 X DG 7 ? ? 111.05 108.30 2.75 0.30 N 77 3 "O4'" X DG 8 ? ? "C1'" X DG 8 ? ? N9 X DG 8 ? ? 113.28 108.30 4.98 0.30 N 78 3 "O4'" X DG 9 ? ? "C1'" X DG 9 ? ? N9 X DG 9 ? ? 110.84 108.30 2.54 0.30 N 79 3 "O4'" X DC 10 ? ? "C1'" X DC 10 ? ? N1 X DC 10 ? ? 110.36 108.30 2.06 0.30 N 80 3 N3 X DC 10 ? ? C2 X DC 10 ? ? O2 X DC 10 ? ? 117.10 121.90 -4.80 0.70 N 81 3 "O4'" X DG 11 ? ? "C1'" X DG 11 ? ? N9 X DG 11 ? ? 110.36 108.30 2.06 0.30 N 82 3 "O4'" X DG 12 ? ? "C1'" X DG 12 ? ? N9 X DG 12 ? ? 112.70 108.30 4.40 0.30 N 83 3 N3 X DC 13 ? ? C2 X DC 13 ? ? O2 X DC 13 ? ? 117.12 121.90 -4.78 0.70 N 84 3 "O4'" X DG 14 ? ? "C1'" X DG 14 ? ? N9 X DG 14 ? ? 112.37 108.30 4.07 0.30 N 85 3 "O4'" X DG 15 ? ? "C1'" X DG 15 ? ? N9 X DG 15 ? ? 112.61 108.30 4.31 0.30 N 86 3 "O4'" X DG 17 ? ? "C1'" X DG 17 ? ? N9 X DG 17 ? ? 111.35 108.30 3.05 0.30 N 87 3 "O4'" X DC 18 ? ? "C1'" X DC 18 ? ? N1 X DC 18 ? ? 110.60 108.30 2.30 0.30 N 88 3 N3 X DC 18 ? ? C2 X DC 18 ? ? O2 X DC 18 ? ? 117.13 121.90 -4.77 0.70 N 89 3 C4 X DA 19 ? ? C5 X DA 19 ? ? C6 X DA 19 ? ? 113.51 117.00 -3.49 0.50 N 90 3 C5 X DA 19 ? ? C6 X DA 19 ? ? N1 X DA 19 ? ? 121.75 117.70 4.05 0.50 N 91 3 N1 X DA 19 ? ? C6 X DA 19 ? ? N6 X DA 19 ? ? 112.35 118.60 -6.25 0.60 N 92 3 "O4'" X DG 20 ? ? "C1'" X DG 20 ? ? N9 X DG 20 ? ? 110.74 108.30 2.44 0.30 N 93 4 "O4'" X DA 1 ? ? "C1'" X DA 1 ? ? N9 X DA 1 ? ? 112.70 108.30 4.40 0.30 N 94 4 C4 X DA 1 ? ? C5 X DA 1 ? ? C6 X DA 1 ? ? 113.95 117.00 -3.05 0.50 N 95 4 C5 X DA 1 ? ? C6 X DA 1 ? ? N1 X DA 1 ? ? 121.47 117.70 3.77 0.50 N 96 4 N1 X DA 1 ? ? C6 X DA 1 ? ? N6 X DA 1 ? ? 113.10 118.60 -5.50 0.60 N 97 4 "O4'" X DA 2 ? ? "C1'" X DA 2 ? ? N9 X DA 2 ? ? 110.51 108.30 2.21 0.30 N 98 4 C4 X DA 2 ? ? C5 X DA 2 ? ? C6 X DA 2 ? ? 113.48 117.00 -3.52 0.50 N 99 4 C5 X DA 2 ? ? C6 X DA 2 ? ? N1 X DA 2 ? ? 121.35 117.70 3.65 0.50 N 100 4 N1 X DA 2 ? ? C6 X DA 2 ? ? N6 X DA 2 ? ? 112.82 118.60 -5.78 0.60 N 101 4 "O4'" X DG 4 ? ? "C1'" X DG 4 ? ? N9 X DG 4 ? ? 112.54 108.30 4.24 0.30 N 102 4 "O4'" X DG 5 ? ? "C1'" X DG 5 ? ? N9 X DG 5 ? ? 110.72 108.30 2.42 0.30 N 103 4 "O4'" X DA 6 ? ? "C1'" X DA 6 ? ? N9 X DA 6 ? ? 110.14 108.30 1.84 0.30 N 104 4 C4 X DA 6 ? ? C5 X DA 6 ? ? C6 X DA 6 ? ? 113.72 117.00 -3.28 0.50 N 105 4 C5 X DA 6 ? ? C6 X DA 6 ? ? N1 X DA 6 ? ? 121.43 117.70 3.73 0.50 N 106 4 N1 X DA 6 ? ? C6 X DA 6 ? ? N6 X DA 6 ? ? 113.00 118.60 -5.60 0.60 N 107 4 "O4'" X DG 7 ? ? "C1'" X DG 7 ? ? N9 X DG 7 ? ? 110.97 108.30 2.67 0.30 N 108 4 "O4'" X DG 8 ? ? "C1'" X DG 8 ? ? N9 X DG 8 ? ? 113.30 108.30 5.00 0.30 N 109 4 "O4'" X DG 9 ? ? "C1'" X DG 9 ? ? N9 X DG 9 ? ? 111.02 108.30 2.72 0.30 N 110 4 "O4'" X DC 10 ? ? "C1'" X DC 10 ? ? N1 X DC 10 ? ? 110.36 108.30 2.06 0.30 N 111 4 N3 X DC 10 ? ? C2 X DC 10 ? ? O2 X DC 10 ? ? 117.10 121.90 -4.80 0.70 N 112 4 "O4'" X DG 11 ? ? "C1'" X DG 11 ? ? N9 X DG 11 ? ? 110.43 108.30 2.13 0.30 N 113 4 "O4'" X DG 12 ? ? "C1'" X DG 12 ? ? N9 X DG 12 ? ? 113.33 108.30 5.03 0.30 N 114 4 N3 X DC 13 ? ? C2 X DC 13 ? ? O2 X DC 13 ? ? 117.11 121.90 -4.79 0.70 N 115 4 "O4'" X DG 14 ? ? "C1'" X DG 14 ? ? N9 X DG 14 ? ? 111.82 108.30 3.52 0.30 N 116 4 "O4'" X DG 15 ? ? "C1'" X DG 15 ? ? N9 X DG 15 ? ? 112.86 108.30 4.56 0.30 N 117 4 "O4'" X DG 17 ? ? "C1'" X DG 17 ? ? N9 X DG 17 ? ? 111.39 108.30 3.09 0.30 N 118 4 "O4'" X DC 18 ? ? "C1'" X DC 18 ? ? N1 X DC 18 ? ? 110.50 108.30 2.20 0.30 N 119 4 N3 X DC 18 ? ? C2 X DC 18 ? ? O2 X DC 18 ? ? 117.40 121.90 -4.50 0.70 N 120 4 C4 X DA 19 ? ? C5 X DA 19 ? ? C6 X DA 19 ? ? 113.53 117.00 -3.47 0.50 N 121 4 C5 X DA 19 ? ? C6 X DA 19 ? ? N1 X DA 19 ? ? 121.78 117.70 4.08 0.50 N 122 4 N1 X DA 19 ? ? C6 X DA 19 ? ? N6 X DA 19 ? ? 112.28 118.60 -6.32 0.60 N 123 4 "O4'" X DG 20 ? ? "C1'" X DG 20 ? ? N9 X DG 20 ? ? 110.46 108.30 2.16 0.30 N 124 5 "O4'" X DA 1 ? ? "C1'" X DA 1 ? ? N9 X DA 1 ? ? 112.82 108.30 4.52 0.30 N 125 5 C4 X DA 1 ? ? C5 X DA 1 ? ? C6 X DA 1 ? ? 113.86 117.00 -3.14 0.50 N 126 5 C5 X DA 1 ? ? C6 X DA 1 ? ? N1 X DA 1 ? ? 121.57 117.70 3.87 0.50 N 127 5 N1 X DA 1 ? ? C6 X DA 1 ? ? N6 X DA 1 ? ? 113.00 118.60 -5.60 0.60 N 128 5 C4 X DA 2 ? ? C5 X DA 2 ? ? C6 X DA 2 ? ? 113.44 117.00 -3.56 0.50 N 129 5 C5 X DA 2 ? ? C6 X DA 2 ? ? N1 X DA 2 ? ? 121.48 117.70 3.78 0.50 N 130 5 N1 X DA 2 ? ? C6 X DA 2 ? ? N6 X DA 2 ? ? 112.69 118.60 -5.91 0.60 N 131 5 "O4'" X DG 3 ? ? "C1'" X DG 3 ? ? N9 X DG 3 ? ? 110.71 108.30 2.41 0.30 N 132 5 "O4'" X DG 4 ? ? "C1'" X DG 4 ? ? N9 X DG 4 ? ? 110.76 108.30 2.46 0.30 N 133 5 C4 X DA 6 ? ? C5 X DA 6 ? ? C6 X DA 6 ? ? 113.73 117.00 -3.27 0.50 N 134 5 C5 X DA 6 ? ? C6 X DA 6 ? ? N1 X DA 6 ? ? 121.43 117.70 3.73 0.50 N 135 5 N1 X DA 6 ? ? C6 X DA 6 ? ? N6 X DA 6 ? ? 112.88 118.60 -5.72 0.60 N 136 5 "O4'" X DG 7 ? ? "C1'" X DG 7 ? ? N9 X DG 7 ? ? 111.68 108.30 3.38 0.30 N 137 5 "O4'" X DG 8 ? ? "C1'" X DG 8 ? ? N9 X DG 8 ? ? 112.58 108.30 4.28 0.30 N 138 5 "O4'" X DG 9 ? ? "C1'" X DG 9 ? ? N9 X DG 9 ? ? 110.71 108.30 2.41 0.30 N 139 5 "O4'" X DC 10 ? ? "C1'" X DC 10 ? ? N1 X DC 10 ? ? 110.53 108.30 2.23 0.30 N 140 5 N3 X DC 10 ? ? C2 X DC 10 ? ? O2 X DC 10 ? ? 117.07 121.90 -4.83 0.70 N 141 5 "O4'" X DG 11 ? ? "C1'" X DG 11 ? ? N9 X DG 11 ? ? 111.03 108.30 2.73 0.30 N 142 5 "O4'" X DG 12 ? ? "C1'" X DG 12 ? ? N9 X DG 12 ? ? 111.84 108.30 3.54 0.30 N 143 5 N3 X DC 13 ? ? C2 X DC 13 ? ? O2 X DC 13 ? ? 117.32 121.90 -4.58 0.70 N 144 5 "O4'" X DG 14 ? ? "C1'" X DG 14 ? ? N9 X DG 14 ? ? 111.33 108.30 3.03 0.30 N 145 5 "O4'" X DG 15 ? ? "C1'" X DG 15 ? ? N9 X DG 15 ? ? 111.56 108.30 3.26 0.30 N 146 5 "O4'" X DG 16 ? ? "C1'" X DG 16 ? ? N9 X DG 16 ? ? 110.44 108.30 2.14 0.30 N 147 5 "O4'" X DG 17 ? ? "C1'" X DG 17 ? ? N9 X DG 17 ? ? 111.40 108.30 3.10 0.30 N 148 5 "O4'" X DC 18 ? ? "C1'" X DC 18 ? ? N1 X DC 18 ? ? 110.51 108.30 2.21 0.30 N 149 5 N3 X DC 18 ? ? C2 X DC 18 ? ? O2 X DC 18 ? ? 117.21 121.90 -4.69 0.70 N 150 5 C4 X DA 19 ? ? C5 X DA 19 ? ? C6 X DA 19 ? ? 113.46 117.00 -3.54 0.50 N 151 5 C5 X DA 19 ? ? C6 X DA 19 ? ? N1 X DA 19 ? ? 121.81 117.70 4.11 0.50 N 152 5 N1 X DA 19 ? ? C6 X DA 19 ? ? N6 X DA 19 ? ? 112.23 118.60 -6.37 0.60 N 153 5 "O4'" X DG 20 ? ? "C1'" X DG 20 ? ? N9 X DG 20 ? ? 111.74 108.30 3.44 0.30 N 154 6 "O4'" X DA 1 ? ? "C1'" X DA 1 ? ? N9 X DA 1 ? ? 112.53 108.30 4.23 0.30 N 155 6 C4 X DA 1 ? ? C5 X DA 1 ? ? C6 X DA 1 ? ? 113.90 117.00 -3.10 0.50 N 156 6 C5 X DA 1 ? ? C6 X DA 1 ? ? N1 X DA 1 ? ? 121.56 117.70 3.86 0.50 N 157 6 N1 X DA 1 ? ? C6 X DA 1 ? ? N6 X DA 1 ? ? 113.00 118.60 -5.60 0.60 N 158 6 C4 X DA 2 ? ? C5 X DA 2 ? ? C6 X DA 2 ? ? 113.37 117.00 -3.63 0.50 N 159 6 C5 X DA 2 ? ? C6 X DA 2 ? ? N1 X DA 2 ? ? 121.50 117.70 3.80 0.50 N 160 6 N1 X DA 2 ? ? C6 X DA 2 ? ? N6 X DA 2 ? ? 112.77 118.60 -5.83 0.60 N 161 6 "O4'" X DG 3 ? ? "C1'" X DG 3 ? ? N9 X DG 3 ? ? 110.74 108.30 2.44 0.30 N 162 6 "O4'" X DG 4 ? ? "C1'" X DG 4 ? ? N9 X DG 4 ? ? 111.26 108.30 2.96 0.30 N 163 6 C4 X DA 6 ? ? C5 X DA 6 ? ? C6 X DA 6 ? ? 113.67 117.00 -3.33 0.50 N 164 6 C5 X DA 6 ? ? C6 X DA 6 ? ? N1 X DA 6 ? ? 121.38 117.70 3.68 0.50 N 165 6 N1 X DA 6 ? ? C6 X DA 6 ? ? N6 X DA 6 ? ? 113.03 118.60 -5.57 0.60 N 166 6 "O4'" X DG 7 ? ? "C1'" X DG 7 ? ? N9 X DG 7 ? ? 111.79 108.30 3.49 0.30 N 167 6 "O4'" X DG 8 ? ? "C1'" X DG 8 ? ? N9 X DG 8 ? ? 113.31 108.30 5.01 0.30 N 168 6 "O4'" X DG 9 ? ? "C1'" X DG 9 ? ? N9 X DG 9 ? ? 111.08 108.30 2.78 0.30 N 169 6 "O4'" X DC 10 ? ? "C1'" X DC 10 ? ? N1 X DC 10 ? ? 110.67 108.30 2.37 0.30 N 170 6 N3 X DC 10 ? ? C2 X DC 10 ? ? O2 X DC 10 ? ? 117.16 121.90 -4.74 0.70 N 171 6 "O4'" X DG 11 ? ? "C1'" X DG 11 ? ? N9 X DG 11 ? ? 110.40 108.30 2.10 0.30 N 172 6 "O4'" X DG 12 ? ? "C1'" X DG 12 ? ? N9 X DG 12 ? ? 111.70 108.30 3.40 0.30 N 173 6 N3 X DC 13 ? ? C2 X DC 13 ? ? O2 X DC 13 ? ? 117.34 121.90 -4.56 0.70 N 174 6 "O4'" X DG 14 ? ? "C1'" X DG 14 ? ? N9 X DG 14 ? ? 111.61 108.30 3.31 0.30 N 175 6 "O4'" X DG 15 ? ? "C1'" X DG 15 ? ? N9 X DG 15 ? ? 112.86 108.30 4.56 0.30 N 176 6 "O4'" X DG 17 ? ? "C1'" X DG 17 ? ? N9 X DG 17 ? ? 111.13 108.30 2.83 0.30 N 177 6 "O4'" X DC 18 ? ? "C1'" X DC 18 ? ? N1 X DC 18 ? ? 110.62 108.30 2.32 0.30 N 178 6 N3 X DC 18 ? ? C2 X DC 18 ? ? O2 X DC 18 ? ? 117.29 121.90 -4.61 0.70 N 179 6 C4 X DA 19 ? ? C5 X DA 19 ? ? C6 X DA 19 ? ? 113.50 117.00 -3.50 0.50 N 180 6 C5 X DA 19 ? ? C6 X DA 19 ? ? N1 X DA 19 ? ? 121.72 117.70 4.02 0.50 N 181 6 N1 X DA 19 ? ? C6 X DA 19 ? ? N6 X DA 19 ? ? 112.36 118.60 -6.24 0.60 N 182 6 "O4'" X DG 20 ? ? "C1'" X DG 20 ? ? N9 X DG 20 ? ? 110.81 108.30 2.51 0.30 N 183 7 "O4'" X DA 1 ? ? "C1'" X DA 1 ? ? N9 X DA 1 ? ? 112.52 108.30 4.22 0.30 N 184 7 C4 X DA 1 ? ? C5 X DA 1 ? ? C6 X DA 1 ? ? 113.88 117.00 -3.12 0.50 N 185 7 C5 X DA 1 ? ? C6 X DA 1 ? ? N1 X DA 1 ? ? 121.49 117.70 3.79 0.50 N 186 7 N1 X DA 1 ? ? C6 X DA 1 ? ? N6 X DA 1 ? ? 113.10 118.60 -5.50 0.60 N 187 7 "O4'" X DA 2 ? ? "C1'" X DA 2 ? ? N9 X DA 2 ? ? 110.26 108.30 1.96 0.30 N 188 7 C4 X DA 2 ? ? C5 X DA 2 ? ? C6 X DA 2 ? ? 113.41 117.00 -3.59 0.50 N 189 7 C5 X DA 2 ? ? C6 X DA 2 ? ? N1 X DA 2 ? ? 121.45 117.70 3.75 0.50 N 190 7 N1 X DA 2 ? ? C6 X DA 2 ? ? N6 X DA 2 ? ? 112.74 118.60 -5.86 0.60 N 191 7 "O4'" X DG 3 ? ? "C1'" X DG 3 ? ? N9 X DG 3 ? ? 110.80 108.30 2.50 0.30 N 192 7 "O4'" X DG 4 ? ? "C1'" X DG 4 ? ? N9 X DG 4 ? ? 111.39 108.30 3.09 0.30 N 193 7 "O4'" X DG 5 ? ? "C1'" X DG 5 ? ? N9 X DG 5 ? ? 110.12 108.30 1.82 0.30 N 194 7 C4 X DA 6 ? ? C5 X DA 6 ? ? C6 X DA 6 ? ? 113.73 117.00 -3.27 0.50 N 195 7 C5 X DA 6 ? ? C6 X DA 6 ? ? N1 X DA 6 ? ? 121.44 117.70 3.74 0.50 N 196 7 N1 X DA 6 ? ? C6 X DA 6 ? ? N6 X DA 6 ? ? 112.98 118.60 -5.62 0.60 N 197 7 "O4'" X DG 7 ? ? "C1'" X DG 7 ? ? N9 X DG 7 ? ? 110.88 108.30 2.58 0.30 N 198 7 "O4'" X DG 8 ? ? "C1'" X DG 8 ? ? N9 X DG 8 ? ? 113.14 108.30 4.84 0.30 N 199 7 "O4'" X DG 9 ? ? "C1'" X DG 9 ? ? N9 X DG 9 ? ? 110.92 108.30 2.62 0.30 N 200 7 "O4'" X DC 10 ? ? "C1'" X DC 10 ? ? N1 X DC 10 ? ? 110.29 108.30 1.99 0.30 N 201 7 N3 X DC 10 ? ? C2 X DC 10 ? ? O2 X DC 10 ? ? 117.05 121.90 -4.85 0.70 N 202 7 "O4'" X DG 11 ? ? "C1'" X DG 11 ? ? N9 X DG 11 ? ? 110.49 108.30 2.19 0.30 N 203 7 "O4'" X DG 12 ? ? "C1'" X DG 12 ? ? N9 X DG 12 ? ? 113.45 108.30 5.15 0.30 N 204 7 N3 X DC 13 ? ? C2 X DC 13 ? ? O2 X DC 13 ? ? 117.20 121.90 -4.70 0.70 N 205 7 "O4'" X DG 14 ? ? "C1'" X DG 14 ? ? N9 X DG 14 ? ? 112.32 108.30 4.02 0.30 N 206 7 "O4'" X DG 15 ? ? "C1'" X DG 15 ? ? N9 X DG 15 ? ? 112.52 108.30 4.22 0.30 N 207 7 "O4'" X DG 16 ? ? "C1'" X DG 16 ? ? N9 X DG 16 ? ? 110.21 108.30 1.91 0.30 N 208 7 "O4'" X DG 17 ? ? "C1'" X DG 17 ? ? N9 X DG 17 ? ? 111.36 108.30 3.06 0.30 N 209 7 "C3'" X DG 17 ? ? "O3'" X DG 17 ? ? P X DC 18 ? ? 127.24 119.70 7.54 1.20 Y 210 7 N3 X DC 18 ? ? C2 X DC 18 ? ? O2 X DC 18 ? ? 117.21 121.90 -4.69 0.70 N 211 7 C4 X DA 19 ? ? C5 X DA 19 ? ? C6 X DA 19 ? ? 113.42 117.00 -3.58 0.50 N 212 7 C5 X DA 19 ? ? C6 X DA 19 ? ? N1 X DA 19 ? ? 121.65 117.70 3.95 0.50 N 213 7 N1 X DA 19 ? ? C6 X DA 19 ? ? N6 X DA 19 ? ? 112.18 118.60 -6.42 0.60 N 214 7 "O4'" X DG 20 ? ? "C1'" X DG 20 ? ? N9 X DG 20 ? ? 110.96 108.30 2.66 0.30 N 215 8 "O4'" X DA 1 ? ? "C1'" X DA 1 ? ? N9 X DA 1 ? ? 112.62 108.30 4.32 0.30 N 216 8 C4 X DA 1 ? ? C5 X DA 1 ? ? C6 X DA 1 ? ? 113.80 117.00 -3.20 0.50 N 217 8 C5 X DA 1 ? ? C6 X DA 1 ? ? N1 X DA 1 ? ? 121.57 117.70 3.87 0.50 N 218 8 N1 X DA 1 ? ? C6 X DA 1 ? ? N6 X DA 1 ? ? 113.16 118.60 -5.44 0.60 N 219 8 C4 X DA 2 ? ? C5 X DA 2 ? ? C6 X DA 2 ? ? 113.44 117.00 -3.56 0.50 N 220 8 C5 X DA 2 ? ? C6 X DA 2 ? ? N1 X DA 2 ? ? 121.36 117.70 3.66 0.50 N 221 8 N1 X DA 2 ? ? C6 X DA 2 ? ? N6 X DA 2 ? ? 112.76 118.60 -5.84 0.60 N 222 8 "O4'" X DG 3 ? ? "C1'" X DG 3 ? ? N9 X DG 3 ? ? 110.68 108.30 2.38 0.30 N 223 8 "O4'" X DG 4 ? ? "C1'" X DG 4 ? ? N9 X DG 4 ? ? 111.67 108.30 3.37 0.30 N 224 8 C4 X DA 6 ? ? C5 X DA 6 ? ? C6 X DA 6 ? ? 113.85 117.00 -3.15 0.50 N 225 8 C5 X DA 6 ? ? C6 X DA 6 ? ? N1 X DA 6 ? ? 121.36 117.70 3.66 0.50 N 226 8 N1 X DA 6 ? ? C6 X DA 6 ? ? N6 X DA 6 ? ? 113.05 118.60 -5.55 0.60 N 227 8 "O4'" X DG 7 ? ? "C1'" X DG 7 ? ? N9 X DG 7 ? ? 110.81 108.30 2.51 0.30 N 228 8 "O4'" X DG 8 ? ? "C1'" X DG 8 ? ? N9 X DG 8 ? ? 113.41 108.30 5.11 0.30 N 229 8 "O4'" X DG 9 ? ? "C1'" X DG 9 ? ? N9 X DG 9 ? ? 110.93 108.30 2.63 0.30 N 230 8 N3 X DC 10 ? ? C2 X DC 10 ? ? O2 X DC 10 ? ? 117.14 121.90 -4.76 0.70 N 231 8 "O4'" X DG 11 ? ? "C1'" X DG 11 ? ? N9 X DG 11 ? ? 110.34 108.30 2.04 0.30 N 232 8 "O4'" X DG 12 ? ? "C1'" X DG 12 ? ? N9 X DG 12 ? ? 110.99 108.30 2.69 0.30 N 233 8 "O4'" X DC 13 ? ? "C1'" X DC 13 ? ? N1 X DC 13 ? ? 110.22 108.30 1.92 0.30 N 234 8 N3 X DC 13 ? ? C2 X DC 13 ? ? O2 X DC 13 ? ? 117.29 121.90 -4.61 0.70 N 235 8 "O4'" X DG 14 ? ? "C1'" X DG 14 ? ? N9 X DG 14 ? ? 111.52 108.30 3.22 0.30 N 236 8 "O4'" X DG 15 ? ? "C1'" X DG 15 ? ? N9 X DG 15 ? ? 113.24 108.30 4.94 0.30 N 237 8 "O4'" X DG 17 ? ? "C1'" X DG 17 ? ? N9 X DG 17 ? ? 110.77 108.30 2.47 0.30 N 238 8 "O4'" X DC 18 ? ? "C1'" X DC 18 ? ? N1 X DC 18 ? ? 110.51 108.30 2.21 0.30 N 239 8 N3 X DC 18 ? ? C2 X DC 18 ? ? O2 X DC 18 ? ? 117.21 121.90 -4.69 0.70 N 240 8 C4 X DA 19 ? ? C5 X DA 19 ? ? C6 X DA 19 ? ? 113.48 117.00 -3.52 0.50 N 241 8 C5 X DA 19 ? ? C6 X DA 19 ? ? N1 X DA 19 ? ? 121.70 117.70 4.00 0.50 N 242 8 N1 X DA 19 ? ? C6 X DA 19 ? ? N6 X DA 19 ? ? 112.27 118.60 -6.33 0.60 N 243 8 "O4'" X DG 20 ? ? "C1'" X DG 20 ? ? N9 X DG 20 ? ? 110.47 108.30 2.17 0.30 N 244 9 "O4'" X DA 1 ? ? "C1'" X DA 1 ? ? N9 X DA 1 ? ? 112.93 108.30 4.63 0.30 N 245 9 C4 X DA 1 ? ? C5 X DA 1 ? ? C6 X DA 1 ? ? 113.88 117.00 -3.12 0.50 N 246 9 C5 X DA 1 ? ? C6 X DA 1 ? ? N1 X DA 1 ? ? 121.56 117.70 3.86 0.50 N 247 9 N1 X DA 1 ? ? C6 X DA 1 ? ? N6 X DA 1 ? ? 112.94 118.60 -5.66 0.60 N 248 9 C4 X DA 2 ? ? C5 X DA 2 ? ? C6 X DA 2 ? ? 113.39 117.00 -3.61 0.50 N 249 9 C5 X DA 2 ? ? C6 X DA 2 ? ? N1 X DA 2 ? ? 121.41 117.70 3.71 0.50 N 250 9 N1 X DA 2 ? ? C6 X DA 2 ? ? N6 X DA 2 ? ? 112.80 118.60 -5.80 0.60 N 251 9 "O4'" X DG 3 ? ? "C1'" X DG 3 ? ? N9 X DG 3 ? ? 110.65 108.30 2.35 0.30 N 252 9 "O4'" X DG 4 ? ? "C1'" X DG 4 ? ? N9 X DG 4 ? ? 111.88 108.30 3.58 0.30 N 253 9 "O4'" X DG 5 ? ? "C1'" X DG 5 ? ? N9 X DG 5 ? ? 110.46 108.30 2.16 0.30 N 254 9 C4 X DA 6 ? ? C5 X DA 6 ? ? C6 X DA 6 ? ? 113.76 117.00 -3.24 0.50 N 255 9 C5 X DA 6 ? ? C6 X DA 6 ? ? N1 X DA 6 ? ? 121.41 117.70 3.71 0.50 N 256 9 N1 X DA 6 ? ? C6 X DA 6 ? ? N6 X DA 6 ? ? 113.09 118.60 -5.51 0.60 N 257 9 "O4'" X DG 7 ? ? "C1'" X DG 7 ? ? N9 X DG 7 ? ? 111.14 108.30 2.84 0.30 N 258 9 "O4'" X DG 8 ? ? "C1'" X DG 8 ? ? N9 X DG 8 ? ? 113.11 108.30 4.81 0.30 N 259 9 "O4'" X DG 9 ? ? "C1'" X DG 9 ? ? N9 X DG 9 ? ? 110.76 108.30 2.46 0.30 N 260 9 "O4'" X DC 10 ? ? "C1'" X DC 10 ? ? N1 X DC 10 ? ? 110.56 108.30 2.26 0.30 N 261 9 N3 X DC 10 ? ? C2 X DC 10 ? ? O2 X DC 10 ? ? 117.11 121.90 -4.79 0.70 N 262 9 "O4'" X DG 11 ? ? "C1'" X DG 11 ? ? N9 X DG 11 ? ? 110.66 108.30 2.36 0.30 N 263 9 "O4'" X DG 12 ? ? "C1'" X DG 12 ? ? N9 X DG 12 ? ? 112.09 108.30 3.79 0.30 N 264 9 "O4'" X DC 13 ? ? "C1'" X DC 13 ? ? N1 X DC 13 ? ? 110.36 108.30 2.06 0.30 N 265 9 N3 X DC 13 ? ? C2 X DC 13 ? ? O2 X DC 13 ? ? 117.27 121.90 -4.63 0.70 N 266 9 "O4'" X DG 14 ? ? "C1'" X DG 14 ? ? N9 X DG 14 ? ? 111.83 108.30 3.53 0.30 N 267 9 "O4'" X DG 15 ? ? "C1'" X DG 15 ? ? N9 X DG 15 ? ? 112.34 108.30 4.04 0.30 N 268 9 "O4'" X DG 16 ? ? "C1'" X DG 16 ? ? N9 X DG 16 ? ? 110.25 108.30 1.95 0.30 N 269 9 "O4'" X DG 17 ? ? "C1'" X DG 17 ? ? N9 X DG 17 ? ? 111.06 108.30 2.76 0.30 N 270 9 "O4'" X DC 18 ? ? "C1'" X DC 18 ? ? N1 X DC 18 ? ? 110.59 108.30 2.29 0.30 N 271 9 N3 X DC 18 ? ? C2 X DC 18 ? ? O2 X DC 18 ? ? 117.26 121.90 -4.64 0.70 N 272 9 C4 X DA 19 ? ? C5 X DA 19 ? ? C6 X DA 19 ? ? 113.41 117.00 -3.59 0.50 N 273 9 C5 X DA 19 ? ? C6 X DA 19 ? ? N1 X DA 19 ? ? 121.80 117.70 4.10 0.50 N 274 9 N1 X DA 19 ? ? C6 X DA 19 ? ? N6 X DA 19 ? ? 112.37 118.60 -6.23 0.60 N 275 9 "O4'" X DG 20 ? ? "C1'" X DG 20 ? ? N9 X DG 20 ? ? 110.52 108.30 2.22 0.30 N 276 10 "O4'" X DA 1 ? ? "C1'" X DA 1 ? ? N9 X DA 1 ? ? 112.67 108.30 4.37 0.30 N 277 10 C4 X DA 1 ? ? C5 X DA 1 ? ? C6 X DA 1 ? ? 113.95 117.00 -3.05 0.50 N 278 10 C5 X DA 1 ? ? C6 X DA 1 ? ? N1 X DA 1 ? ? 121.52 117.70 3.82 0.50 N 279 10 N1 X DA 1 ? ? C6 X DA 1 ? ? N6 X DA 1 ? ? 113.00 118.60 -5.60 0.60 N 280 10 "O4'" X DA 2 ? ? "C1'" X DA 2 ? ? N9 X DA 2 ? ? 110.43 108.30 2.13 0.30 N 281 10 C4 X DA 2 ? ? C5 X DA 2 ? ? C6 X DA 2 ? ? 113.48 117.00 -3.52 0.50 N 282 10 C5 X DA 2 ? ? C6 X DA 2 ? ? N1 X DA 2 ? ? 121.49 117.70 3.79 0.50 N 283 10 N1 X DA 2 ? ? C6 X DA 2 ? ? N6 X DA 2 ? ? 112.91 118.60 -5.69 0.60 N 284 10 "O4'" X DG 3 ? ? "C1'" X DG 3 ? ? N9 X DG 3 ? ? 110.46 108.30 2.16 0.30 N 285 10 "O4'" X DG 4 ? ? "C1'" X DG 4 ? ? N9 X DG 4 ? ? 111.96 108.30 3.66 0.30 N 286 10 "O4'" X DG 5 ? ? "C1'" X DG 5 ? ? N9 X DG 5 ? ? 110.51 108.30 2.21 0.30 N 287 10 C4 X DA 6 ? ? C5 X DA 6 ? ? C6 X DA 6 ? ? 113.72 117.00 -3.28 0.50 N 288 10 C5 X DA 6 ? ? C6 X DA 6 ? ? N1 X DA 6 ? ? 121.47 117.70 3.77 0.50 N 289 10 N1 X DA 6 ? ? C6 X DA 6 ? ? N6 X DA 6 ? ? 113.03 118.60 -5.57 0.60 N 290 10 "O4'" X DG 7 ? ? "C1'" X DG 7 ? ? N9 X DG 7 ? ? 110.82 108.30 2.52 0.30 N 291 10 "O4'" X DG 8 ? ? "C1'" X DG 8 ? ? N9 X DG 8 ? ? 113.56 108.30 5.26 0.30 N 292 10 "O4'" X DG 9 ? ? "C1'" X DG 9 ? ? N9 X DG 9 ? ? 110.90 108.30 2.60 0.30 N 293 10 "O4'" X DC 10 ? ? "C1'" X DC 10 ? ? N1 X DC 10 ? ? 110.44 108.30 2.14 0.30 N 294 10 N3 X DC 10 ? ? C2 X DC 10 ? ? O2 X DC 10 ? ? 117.21 121.90 -4.69 0.70 N 295 10 "O4'" X DG 11 ? ? "C1'" X DG 11 ? ? N9 X DG 11 ? ? 110.29 108.30 1.99 0.30 N 296 10 "O4'" X DG 12 ? ? "C1'" X DG 12 ? ? N9 X DG 12 ? ? 111.49 108.30 3.19 0.30 N 297 10 "O4'" X DC 13 ? ? "C1'" X DC 13 ? ? N1 X DC 13 ? ? 110.55 108.30 2.25 0.30 N 298 10 N3 X DC 13 ? ? C2 X DC 13 ? ? O2 X DC 13 ? ? 117.23 121.90 -4.67 0.70 N 299 10 "O4'" X DG 14 ? ? "C1'" X DG 14 ? ? N9 X DG 14 ? ? 111.66 108.30 3.36 0.30 N 300 10 "O4'" X DG 15 ? ? "C1'" X DG 15 ? ? N9 X DG 15 ? ? 112.54 108.30 4.24 0.30 N 301 10 "O4'" X DG 16 ? ? "C1'" X DG 16 ? ? N9 X DG 16 ? ? 110.11 108.30 1.81 0.30 N 302 10 "O4'" X DG 17 ? ? "C1'" X DG 17 ? ? N9 X DG 17 ? ? 111.13 108.30 2.83 0.30 N 303 10 "O4'" X DC 18 ? ? "C1'" X DC 18 ? ? N1 X DC 18 ? ? 110.45 108.30 2.15 0.30 N 304 10 N3 X DC 18 ? ? C2 X DC 18 ? ? O2 X DC 18 ? ? 117.24 121.90 -4.66 0.70 N 305 10 C4 X DA 19 ? ? C5 X DA 19 ? ? C6 X DA 19 ? ? 113.54 117.00 -3.46 0.50 N 306 10 C5 X DA 19 ? ? C6 X DA 19 ? ? N1 X DA 19 ? ? 121.68 117.70 3.98 0.50 N 307 10 N1 X DA 19 ? ? C6 X DA 19 ? ? N6 X DA 19 ? ? 112.31 118.60 -6.29 0.60 N 308 10 "O4'" X DG 20 ? ? "C1'" X DG 20 ? ? N9 X DG 20 ? ? 110.80 108.30 2.50 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG X 8 ? ? 0.062 'SIDE CHAIN' 2 2 DG X 8 ? ? 0.060 'SIDE CHAIN' 3 3 DG X 8 ? ? 0.055 'SIDE CHAIN' 4 3 DG X 12 ? ? 0.064 'SIDE CHAIN' 5 4 DG X 8 ? ? 0.052 'SIDE CHAIN' 6 7 DG X 8 ? ? 0.058 'SIDE CHAIN' 7 7 DG X 17 ? ? 0.065 'SIDE CHAIN' 8 8 DG X 8 ? ? 0.054 'SIDE CHAIN' 9 9 DG X 8 ? ? 0.060 'SIDE CHAIN' 10 10 DG X 8 ? ? 0.062 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 9P9Y _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 9P9Y _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;1.06 mM DNA (5'-D(*AP*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*CP*AP*GP*G)-3'), 75 mM potassium chloride, 25 mM potassium phosphate, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 21in_Sample _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 ;DNA (5'-D(*AP*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*CP*AP*GP*G)-3') ; 1.06 ? mM 'natural abundance' 1 'potassium chloride' 75 ? mM 'natural abundance' 1 'potassium phosphate' 25 ? mM 'natural abundance' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 283 atm 1 7.0 100 ? ? mM 10C ? pH ? ? K 2 298 atm 1 7.0 100 ? ? mM 25C ? pH ? ? K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 2 1 '2D 1H-13C HSQC' 1 isotropic 2 2 1 '2D 1H-1H NOESY' 1 isotropic 3 1 1 '2D 1H-1H NOESY' 1 isotropic # loop_ _pdbx_nmr_refine.entry_id _pdbx_nmr_refine.method _pdbx_nmr_refine.details _pdbx_nmr_refine.software_ordinal 9P9Y 'simulated annealing' ? 6 9P9Y 'simulated annealing' ? 5 9P9Y 'molecular dynamics' ? 4 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' 'CcpNmr Analysis' 2.4 CCPN 2 'peak picking' 'CcpNmr Analysis' 2.4 CCPN 3 processing TopSpin ? 'Bruker Biospin' 4 'structure calculation' Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, and Kollman' 5 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, and Kollman' 6 'structure calculation' 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 # _ndb_struct_conf_na.entry_id 9P9Y _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 3 1_555 A DG 14 1_555 -1.835 -3.267 -0.039 -3.710 -3.482 90.729 1 X_DG3:DG14_X X 3 ? X 14 ? 6 3 1 A DG 7 1_555 A DG 11 1_555 1.905 3.309 -0.122 -5.860 6.137 -88.444 2 X_DG7:DG11_X X 7 ? X 11 ? 6 3 1 A DG 15 1_555 A DG 12 1_555 -1.638 -3.452 -0.142 3.149 16.663 89.419 3 X_DG15:DG12_X X 15 ? X 12 ? 6 3 1 A DG 17 1_555 A DG 20 1_555 5.611 -0.505 -1.010 15.457 -39.055 -110.889 4 X_DG17:DG20_X X 17 ? X 20 ? 7 4 1 A DG 5 1_555 A DG 9 1_555 2.170 3.089 -0.132 2.713 -6.014 -88.472 5 X_DG5:DG9_X X 5 ? X 9 ? 6 3 1 A DG 16 1_555 A DG 21 1_555 -1.821 -3.232 -0.442 1.743 10.158 92.013 6 X_DG16:DG21_X X 16 ? X 21 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 3 1_555 A DG 14 1_555 A DG 7 1_555 A DG 11 1_555 -1.892 -3.199 0.474 -2.988 8.661 179.994 -1.600 0.946 0.474 4.330 1.494 179.994 1 XX_DG3DG7:DG11DG14_XX X 3 ? X 14 ? X 7 ? X 11 ? 1 A DG 7 1_555 A DG 11 1_555 A DG 15 1_555 A DG 12 1_555 -1.712 -3.040 2.985 -4.261 7.387 114.290 -1.880 0.976 2.896 4.393 2.534 114.494 2 XX_DG7DG15:DG12DG11_XX X 7 ? X 11 ? X 15 ? X 12 ? 1 A DG 17 1_555 A DG 20 1_555 A DG 5 1_555 A DG 9 1_555 0.085 1.113 -3.411 8.323 7.126 34.226 2.836 -1.340 -3.024 11.742 -13.713 35.887 3 XX_DG17DG5:DG9DG20_XX X 17 ? X 20 ? X 5 ? X 9 ? 1 A DG 5 1_555 A DG 9 1_555 A DG 16 1_555 A DG 21 1_555 -1.991 -3.260 -0.084 -17.060 9.187 177.977 -1.630 0.996 -0.083 4.594 8.531 178.006 4 XX_DG5DG16:DG21DG9_XX X 5 ? X 9 ? X 16 ? X 21 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' R01CA177585 1 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' 'U01 CA240346' 2 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' 1R01CA153821 3 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' P30CA023168 4 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 9P9Y _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_ #