HEADER ELECTRON TRANSPORT 18-MAR-91 9PCY TITLE HIGH-RESOLUTION SOLUTION STRUCTURE OF REDUCED FRENCH BEAN PLASTOCYANIN TITLE 2 AND COMPARISON WITH THE CRYSTAL STRUCTURE OF POPLAR PLASTOCYANIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLASTOCYANIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHASEOLUS VULGARIS; SOURCE 3 ORGANISM_TAXID: 3885 KEYWDS ELECTRON TRANSPORT EXPDTA SOLUTION NMR NUMMDL 16 AUTHOR J.M.MOORE,C.A.LEPRE,G.P.GIPPERT,W.J.CHAZIN,D.A.CASE,P.E.WRIGHT REVDAT 3 16-MAR-22 9PCY 1 REMARK LINK REVDAT 2 24-FEB-09 9PCY 1 VERSN REVDAT 1 31-OCT-93 9PCY 0 JRNL AUTH J.M.MOORE,C.A.LEPRE,G.P.GIPPERT,W.J.CHAZIN,D.A.CASE, JRNL AUTH 2 P.E.WRIGHT JRNL TITL HIGH-RESOLUTION SOLUTION STRUCTURE OF REDUCED FRENCH BEAN JRNL TITL 2 PLASTOCYANIN AND COMPARISON WITH THE CRYSTAL STRUCTURE OF JRNL TITL 3 POPLAR PLASTOCYANIN. JRNL REF J.MOL.BIOL. V. 221 533 1991 JRNL REFN ISSN 0022-2836 JRNL PMID 1920431 JRNL DOI 10.1016/0022-2836(91)80071-2 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.P.GIPPERT,P.F.YIP,P.E.WRIGHT,D.A.CASE REMARK 1 TITL COMPUTATIONAL METHODS FOR DETERMINING PROTEIN STRUCTURES REMARK 1 TITL 2 FROM NMR DATA REMARK 1 REF BIOCHEM.PHARM. V. 40 15 1990 REMARK 1 REFN ISSN 0006-2952 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.M.MOORE,D.A.CASE,W.J.CHAZIN,G.P.GIPPERT,T.F.HAVEL,R.POWLS, REMARK 1 AUTH 2 P.E.WRIGHT REMARK 1 TITL THREE-DIMENSIONAL SOLUTION STRUCTURE OF PLASTOCYANIN FROM REMARK 1 TITL 2 THE GREEN ALGA SCENEDESMUS OBLIQUUS REMARK 1 REF SCIENCE V. 240 314 1988 REMARK 1 REFN ISSN 0036-8075 REMARK 1 REFERENCE 3 REMARK 1 AUTH W.J.CHAZIN,M.RANCE,P.E.WRIGHT REMARK 1 TITL COMPLETE ASSIGNMENT OF THE 1H NUCLEAR MAGNETIC RESONANCE REMARK 1 TITL 2 SPECTRUM OF FRENCH BEAN PLASTOCYANIN. APPLICATION OF AN REMARK 1 TITL 3 INTEGRATED APPROACH TO SPIN SYSTEM IDENTIFICATION IN REMARK 1 TITL 4 PROTEINS REMARK 1 REF J.MOL.BIOL. V. 202 603 1988 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 4 REMARK 1 AUTH W.J.CHAZIN,P.E.WRIGHT REMARK 1 TITL COMPLETE ASSIGNMENT OF THE 1H NUCLEAR MAGNETIC RESONANCE REMARK 1 TITL 2 SPECTRUM OF FRENCH BEAN PLASTOCYANIN. SEQUENTIAL RESONANCE REMARK 1 TITL 3 ASSIGNMENTS, SECONDARY STRUCTURE AND GLOBAL FOLD REMARK 1 REF J.MOL.BIOL. V. 202 623 1988 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER REMARK 3 AUTHORS : HAVEL,WUTHRICH (DISGEO), REMARK 3 PEARLMAN,CASE,CALDWELL,SIEBEL,SINGH,WEINER,KOLLMAN REMARK 3 (AMBER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9PCY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000180070. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 16 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 7 42.86 -82.87 REMARK 500 1 ASP A 9 36.27 -73.10 REMARK 500 1 SER A 17 -60.42 -103.14 REMARK 500 1 ASN A 31 99.60 -67.72 REMARK 500 2 ASN A 32 -72.96 -87.34 REMARK 500 2 PRO A 47 109.50 -53.62 REMARK 500 2 ALA A 48 106.42 -52.28 REMARK 500 2 ASP A 51 109.11 -59.11 REMARK 500 3 ALA A 48 108.37 -51.50 REMARK 500 4 ASN A 32 -69.72 -97.44 REMARK 500 4 GLU A 43 -36.68 -37.61 REMARK 500 4 GLU A 45 57.58 -93.32 REMARK 500 4 PRO A 47 108.15 -57.85 REMARK 500 4 PRO A 58 107.31 -48.97 REMARK 500 4 PRO A 86 -19.49 -46.29 REMARK 500 5 ASN A 32 -72.08 -84.33 REMARK 500 5 ALA A 33 -53.54 -146.24 REMARK 500 5 PRO A 58 99.28 -33.54 REMARK 500 5 GLU A 68 122.82 -38.33 REMARK 500 6 ASP A 9 34.37 -73.72 REMARK 500 6 ASN A 31 93.51 -67.70 REMARK 500 6 ALA A 48 107.88 -52.88 REMARK 500 6 GLU A 68 111.07 -18.53 REMARK 500 7 ASP A 9 42.97 -78.31 REMARK 500 7 SER A 11 106.27 -40.44 REMARK 500 7 ASN A 32 -69.93 -94.05 REMARK 500 7 PRO A 47 108.98 -58.67 REMARK 500 7 PRO A 58 107.37 -38.47 REMARK 500 8 PRO A 47 104.81 -58.88 REMARK 500 8 GLU A 59 -37.05 -38.86 REMARK 500 8 GLU A 68 118.41 -26.24 REMARK 500 8 ASP A 75 -63.22 -92.35 REMARK 500 9 SER A 7 43.88 -83.00 REMARK 500 9 ASP A 9 34.47 -72.85 REMARK 500 9 ASN A 32 -64.74 -102.59 REMARK 500 9 GLU A 59 68.86 -69.06 REMARK 500 9 GLU A 60 -47.96 -167.08 REMARK 500 9 ASN A 64 -46.12 -138.77 REMARK 500 10 ASN A 31 93.82 -67.01 REMARK 500 10 ASN A 32 -75.77 -85.39 REMARK 500 10 GLU A 45 59.36 -118.91 REMARK 500 10 GLU A 68 123.91 -39.86 REMARK 500 11 ASN A 32 -61.84 -92.38 REMARK 500 11 ASP A 44 -64.79 -161.70 REMARK 500 12 SER A 7 47.87 -82.78 REMARK 500 12 ASP A 9 38.07 -72.10 REMARK 500 12 SER A 17 -62.86 -92.61 REMARK 500 12 ALA A 48 107.33 -54.34 REMARK 500 12 ASP A 51 108.15 -57.99 REMARK 500 12 GLU A 59 -48.89 -28.76 REMARK 500 REMARK 500 THIS ENTRY HAS 70 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 TYR A 80 0.10 SIDE CHAIN REMARK 500 2 TYR A 70 0.07 SIDE CHAIN REMARK 500 2 TYR A 80 0.09 SIDE CHAIN REMARK 500 3 TYR A 80 0.07 SIDE CHAIN REMARK 500 4 TYR A 80 0.11 SIDE CHAIN REMARK 500 5 TYR A 80 0.11 SIDE CHAIN REMARK 500 6 TYR A 80 0.10 SIDE CHAIN REMARK 500 7 TYR A 70 0.08 SIDE CHAIN REMARK 500 7 TYR A 80 0.10 SIDE CHAIN REMARK 500 8 TYR A 80 0.14 SIDE CHAIN REMARK 500 9 TYR A 80 0.11 SIDE CHAIN REMARK 500 10 TYR A 80 0.09 SIDE CHAIN REMARK 500 11 TYR A 70 0.07 SIDE CHAIN REMARK 500 11 TYR A 80 0.11 SIDE CHAIN REMARK 500 12 TYR A 70 0.08 SIDE CHAIN REMARK 500 12 TYR A 80 0.11 SIDE CHAIN REMARK 500 13 TYR A 80 0.12 SIDE CHAIN REMARK 500 14 PHE A 14 0.08 SIDE CHAIN REMARK 500 14 TYR A 80 0.12 SIDE CHAIN REMARK 500 15 TYR A 80 0.09 SIDE CHAIN REMARK 500 16 TYR A 80 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 100 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 37 ND1 REMARK 620 2 CYS A 84 SG 121.0 REMARK 620 3 HIS A 87 ND1 119.2 114.1 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 100 DBREF 9PCY A 1 99 UNP P00287 PLAS_PHAVU 1 99 SEQRES 1 A 99 LEU GLU VAL LEU LEU GLY SER GLY ASP GLY SER LEU VAL SEQRES 2 A 99 PHE VAL PRO SER GLU PHE SER VAL PRO SER GLY GLU LYS SEQRES 3 A 99 ILE VAL PHE LYS ASN ASN ALA GLY PHE PRO HIS ASN VAL SEQRES 4 A 99 VAL PHE ASP GLU ASP GLU ILE PRO ALA GLY VAL ASP ALA SEQRES 5 A 99 VAL LYS ILE SER MET PRO GLU GLU GLU LEU LEU ASN ALA SEQRES 6 A 99 PRO GLY GLU THR TYR VAL VAL THR LEU ASP THR LYS GLY SEQRES 7 A 99 THR TYR SER PHE TYR CYS SER PRO HIS GLN GLY ALA GLY SEQRES 8 A 99 MET VAL GLY LYS VAL THR VAL ASN HET CU A 100 1 HETNAM CU COPPER (II) ION FORMUL 2 CU CU 2+ HELIX 1 1 ASP A 51 ILE A 55 5 5 HELIX 2 2 SER A 85 GLN A 88 5 4 SHEET 1 A 4 PHE A 14 VAL A 15 0 SHEET 2 A 4 GLU A 2 LEU A 5 -1 N LEU A 4 O VAL A 15 SHEET 3 A 4 GLU A 25 ASN A 31 1 O VAL A 28 N VAL A 3 SHEET 4 A 4 THR A 69 LEU A 74 -1 O TYR A 70 N PHE A 29 SHEET 1 B 4 GLU A 18 PRO A 22 0 SHEET 2 B 4 VAL A 93 ASN A 99 1 O LYS A 95 N PHE A 19 SHEET 3 B 4 GLY A 78 TYR A 83 -1 O GLY A 78 N VAL A 98 SHEET 4 B 4 VAL A 40 PHE A 41 -1 N VAL A 40 O TYR A 83 LINK ND1 HIS A 37 CU CU A 100 1555 1555 2.03 LINK SG CYS A 84 CU CU A 100 1555 1555 2.13 LINK ND1 HIS A 87 CU CU A 100 1555 1555 2.06 CISPEP 1 VAL A 15 PRO A 16 1 -1.37 CISPEP 2 PHE A 35 PRO A 36 1 4.21 CISPEP 3 VAL A 15 PRO A 16 2 -1.48 CISPEP 4 PHE A 35 PRO A 36 2 3.73 CISPEP 5 VAL A 15 PRO A 16 3 -1.57 CISPEP 6 PHE A 35 PRO A 36 3 4.72 CISPEP 7 VAL A 15 PRO A 16 4 -0.81 CISPEP 8 PHE A 35 PRO A 36 4 4.34 CISPEP 9 VAL A 15 PRO A 16 5 -1.36 CISPEP 10 PHE A 35 PRO A 36 5 2.45 CISPEP 11 VAL A 15 PRO A 16 6 -1.37 CISPEP 12 PHE A 35 PRO A 36 6 4.85 CISPEP 13 VAL A 15 PRO A 16 7 -0.45 CISPEP 14 PHE A 35 PRO A 36 7 3.71 CISPEP 15 VAL A 15 PRO A 16 8 -1.45 CISPEP 16 PHE A 35 PRO A 36 8 1.57 CISPEP 17 VAL A 15 PRO A 16 9 -0.77 CISPEP 18 PHE A 35 PRO A 36 9 2.88 CISPEP 19 VAL A 15 PRO A 16 10 -0.79 CISPEP 20 PHE A 35 PRO A 36 10 4.25 CISPEP 21 VAL A 15 PRO A 16 11 -1.02 CISPEP 22 PHE A 35 PRO A 36 11 2.64 CISPEP 23 VAL A 15 PRO A 16 12 -1.62 CISPEP 24 PHE A 35 PRO A 36 12 5.16 CISPEP 25 VAL A 15 PRO A 16 13 -1.33 CISPEP 26 PHE A 35 PRO A 36 13 2.19 CISPEP 27 VAL A 15 PRO A 16 14 -1.07 CISPEP 28 PHE A 35 PRO A 36 14 1.07 CISPEP 29 VAL A 15 PRO A 16 15 -1.41 CISPEP 30 PHE A 35 PRO A 36 15 1.60 CISPEP 31 VAL A 15 PRO A 16 16 -1.30 CISPEP 32 PHE A 35 PRO A 36 16 3.95 SITE 1 AC1 5 PRO A 36 HIS A 37 CYS A 84 HIS A 87 SITE 2 AC1 5 MET A 92 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1