data_9PF5 # _entry.id 9PF5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9PF5 pdb_00009pf5 10.2210/pdb9pf5/pdb WWPDB D_1000297676 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-08-20 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9PF5 _pdbx_database_status.recvd_initial_deposition_date 2025-07-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 5 _pdbx_contact_author.email rs17@nyu.edu _pdbx_contact_author.name_first Ruojie _pdbx_contact_author.name_last Sha _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0807-734X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Horvath, A.' 1 0009-0008-5770-8014 'Wang, M.' 2 0009-0005-3093-7392 'Woloszyn, K.' 3 0000-0003-1200-583X 'Vecchioni, S.' 4 0000-0001-8243-650X 'Ohayon, Y.P.' 5 0000-0001-7500-4282 'Sha, R.' 6 0000-0002-0807-734X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Single Stranded Regions in Tensegrity Triangles' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, M.' 1 ? primary 'Horvath, A.' 2 0009-0008-5770-8014 primary 'Woloszyn, K.' 3 0000-0003-1200-583X primary 'Vecchioni, S.' 4 0000-0001-8243-650X primary 'Ohayon, Y.P.' 5 0000-0001-7500-4282 primary 'Sha, R.' 6 0000-0002-0807-734X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*AP*GP*CP*GP*AP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3') ; 6457.188 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*TP*GP*TP*CP*TP*TP*GP*TP*GP*GP*TP*CP*GP*C)-3') ; 4293.773 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*CP*TP*GP*AP*TP*GP*TP*GP*GP*TP*AP*GP*G)-3') ; 4366.837 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(*AP*AP*CP*CP*TP*AP*CP*CP*TP*GP*GP*CP*AP*GP*GP*AP*CP*GP*AP*CP*T)-3') ; 6417.164 1 ? ? ? ? 5 polymer syn ;DNA (5'-D(*TP*TP*AP*GP*TP*CP*GP*TP*GP*GP*CP*TP*CP*G)-3') ; 4302.788 1 ? ? ? ? 6 polymer syn ;DNA (5'-D(*CP*AP*CP*GP*AP*GP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*AP*AP*GP*A)-3') ; 6466.202 1 ? ? ? ? 7 polymer syn ;DNA (5'-D(P*AP*CP*AP*CP*CP*GP*AP*TP*CP*AP*CP*CP*TP*GP*CP*CP*A)-3') ; 5101.328 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DG)(DA)(DG)(DC)(DG)(DA)(DC)(DC)(DT)(DG)(DT)(DA)(DC)(DG)(DG)(DA)(DC)(DA)(DT)(DC) (DA) ; GAGCGACCTGTACGGACATCA A ? 2 polydeoxyribonucleotide no no '(DT)(DG)(DT)(DC)(DT)(DT)(DG)(DT)(DG)(DG)(DT)(DC)(DG)(DC)' TGTCTTGTGGTCGC E ? 3 polydeoxyribonucleotide no no '(DT)(DC)(DT)(DG)(DA)(DT)(DG)(DT)(DG)(DG)(DT)(DA)(DG)(DG)' TCTGATGTGGTAGG D ? 4 polydeoxyribonucleotide no no ;(DA)(DA)(DC)(DC)(DT)(DA)(DC)(DC)(DT)(DG)(DG)(DC)(DA)(DG)(DG)(DA)(DC)(DG)(DA)(DC) (DT) ; AACCTACCTGGCAGGACGACT B ? 5 polydeoxyribonucleotide no no '(DT)(DT)(DA)(DG)(DT)(DC)(DG)(DT)(DG)(DG)(DC)(DT)(DC)(DG)' TTAGTCGTGGCTCG F ? 6 polydeoxyribonucleotide no no ;(DC)(DA)(DC)(DG)(DA)(DG)(DC)(DC)(DT)(DG)(DA)(DT)(DC)(DG)(DG)(DA)(DC)(DA)(DA)(DG) (DA) ; CACGAGCCTGATCGGACAAGA C ? 7 polydeoxyribonucleotide no no '(DA)(DC)(DA)(DC)(DC)(DG)(DA)(DT)(DC)(DA)(DC)(DC)(DT)(DG)(DC)(DC)(DA)' ACACCGATCACCTGCCA M ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DA n 1 3 DG n 1 4 DC n 1 5 DG n 1 6 DA n 1 7 DC n 1 8 DC n 1 9 DT n 1 10 DG n 1 11 DT n 1 12 DA n 1 13 DC n 1 14 DG n 1 15 DG n 1 16 DA n 1 17 DC n 1 18 DA n 1 19 DT n 1 20 DC n 1 21 DA n 2 1 DT n 2 2 DG n 2 3 DT n 2 4 DC n 2 5 DT n 2 6 DT n 2 7 DG n 2 8 DT n 2 9 DG n 2 10 DG n 2 11 DT n 2 12 DC n 2 13 DG n 2 14 DC n 3 1 DT n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 DG n 3 8 DT n 3 9 DG n 3 10 DG n 3 11 DT n 3 12 DA n 3 13 DG n 3 14 DG n 4 1 DA n 4 2 DA n 4 3 DC n 4 4 DC n 4 5 DT n 4 6 DA n 4 7 DC n 4 8 DC n 4 9 DT n 4 10 DG n 4 11 DG n 4 12 DC n 4 13 DA n 4 14 DG n 4 15 DG n 4 16 DA n 4 17 DC n 4 18 DG n 4 19 DA n 4 20 DC n 4 21 DT n 5 1 DT n 5 2 DT n 5 3 DA n 5 4 DG n 5 5 DT n 5 6 DC n 5 7 DG n 5 8 DT n 5 9 DG n 5 10 DG n 5 11 DC n 5 12 DT n 5 13 DC n 5 14 DG n 6 1 DC n 6 2 DA n 6 3 DC n 6 4 DG n 6 5 DA n 6 6 DG n 6 7 DC n 6 8 DC n 6 9 DT n 6 10 DG n 6 11 DA n 6 12 DT n 6 13 DC n 6 14 DG n 6 15 DG n 6 16 DA n 6 17 DC n 6 18 DA n 6 19 DA n 6 20 DG n 6 21 DA n 7 1 DA n 7 2 DC n 7 3 DA n 7 4 DC n 7 5 DC n 7 6 DG n 7 7 DA n 7 8 DT n 7 9 DC n 7 10 DA n 7 11 DC n 7 12 DC n 7 13 DT n 7 14 DG n 7 15 DC n 7 16 DC n 7 17 DA n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 21 'synthetic construct' ? 32630 ? 2 1 sample 1 14 'synthetic construct' ? 32630 ? 3 1 sample 1 14 'synthetic construct' ? 32630 ? 4 1 sample 1 21 'synthetic construct' ? 32630 ? 5 1 sample 1 14 'synthetic construct' ? 32630 ? 6 1 sample 1 21 'synthetic construct' ? 32630 ? 7 1 sample 1 17 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 101 101 DG DG A . n A 1 2 DA 2 102 102 DA DA A . n A 1 3 DG 3 103 103 DG DG A . n A 1 4 DC 4 104 104 DC DC A . n A 1 5 DG 5 105 105 DG DG A . n A 1 6 DA 6 106 106 DA DA A . n A 1 7 DC 7 107 107 DC DC A . n A 1 8 DC 8 108 108 DC DC A . n A 1 9 DT 9 109 109 DT DT A . n A 1 10 DG 10 110 110 DG DG A . n A 1 11 DT 11 111 111 DT DT A . n A 1 12 DA 12 112 112 DA DA A . n A 1 13 DC 13 113 113 DC DC A . n A 1 14 DG 14 114 114 DG DG A . n A 1 15 DG 15 115 115 DG DG A . n A 1 16 DA 16 116 116 DA DA A . n A 1 17 DC 17 117 117 DC DC A . n A 1 18 DA 18 118 118 DA DA A . n A 1 19 DT 19 119 119 DT DT A . n A 1 20 DC 20 120 120 DC DC A . n A 1 21 DA 21 121 121 DA DA A . n B 2 1 DT 1 101 101 DT DT E . n B 2 2 DG 2 102 102 DG DG E . n B 2 3 DT 3 103 103 DT DT E . n B 2 4 DC 4 104 104 DC DC E . n B 2 5 DT 5 105 105 DT DT E . n B 2 6 DT 6 106 106 DT DT E . n B 2 7 DG 7 107 107 DG DG E . n B 2 8 DT 8 108 108 DT DT E . n B 2 9 DG 9 109 109 DG DG E . n B 2 10 DG 10 110 110 DG DG E . n B 2 11 DT 11 111 111 DT DT E . n B 2 12 DC 12 112 112 DC DC E . n B 2 13 DG 13 113 113 DG DG E . n B 2 14 DC 14 114 114 DC DC E . n C 3 1 DT 1 101 101 DT DT D . n C 3 2 DC 2 102 102 DC DC D . n C 3 3 DT 3 103 103 DT DT D . n C 3 4 DG 4 104 104 DG DG D . n C 3 5 DA 5 105 105 DA DA D . n C 3 6 DT 6 106 106 DT DT D . n C 3 7 DG 7 107 107 DG DG D . n C 3 8 DT 8 108 108 DT DT D . n C 3 9 DG 9 109 109 DG DG D . n C 3 10 DG 10 110 110 DG DG D . n C 3 11 DT 11 111 111 DT DT D . n C 3 12 DA 12 112 112 DA DA D . n C 3 13 DG 13 113 113 DG DG D . n C 3 14 DG 14 114 114 DG DG D . n D 4 1 DA 1 101 101 DA DA B . n D 4 2 DA 2 102 102 DA DA B . n D 4 3 DC 3 103 103 DC DC B . n D 4 4 DC 4 104 104 DC DC B . n D 4 5 DT 5 105 105 DT DT B . n D 4 6 DA 6 106 106 DA DA B . n D 4 7 DC 7 107 107 DC DC B . n D 4 8 DC 8 108 108 DC DC B . n D 4 9 DT 9 109 109 DT DT B . n D 4 10 DG 10 110 110 DG DG B . n D 4 11 DG 11 111 111 DG DG B . n D 4 12 DC 12 112 112 DC DC B . n D 4 13 DA 13 113 113 DA DA B . n D 4 14 DG 14 114 114 DG DG B . n D 4 15 DG 15 115 115 DG DG B . n D 4 16 DA 16 116 116 DA DA B . n D 4 17 DC 17 117 117 DC DC B . n D 4 18 DG 18 118 118 DG DG B . n D 4 19 DA 19 119 119 DA DA B . n D 4 20 DC 20 120 120 DC DC B . n D 4 21 DT 21 121 121 DT DT B . n E 5 1 DT 1 101 101 DT DT F . n E 5 2 DT 2 102 102 DT DT F . n E 5 3 DA 3 103 103 DA DA F . n E 5 4 DG 4 104 104 DG DG F . n E 5 5 DT 5 105 105 DT DT F . n E 5 6 DC 6 106 106 DC DC F . n E 5 7 DG 7 107 107 DG DG F . n E 5 8 DT 8 108 108 DT DT F . n E 5 9 DG 9 109 109 DG DG F . n E 5 10 DG 10 110 110 DG DG F . n E 5 11 DC 11 111 111 DC DC F . n E 5 12 DT 12 112 112 DT DT F . n E 5 13 DC 13 113 113 DC DC F . n E 5 14 DG 14 114 114 DG DG F . n F 6 1 DC 1 101 101 DC DC C . n F 6 2 DA 2 102 102 DA DA C . n F 6 3 DC 3 103 103 DC DC C . n F 6 4 DG 4 104 104 DG DG C . n F 6 5 DA 5 105 105 DA DA C . n F 6 6 DG 6 106 106 DG DG C . n F 6 7 DC 7 107 107 DC DC C . n F 6 8 DC 8 108 108 DC DC C . n F 6 9 DT 9 109 109 DT DT C . n F 6 10 DG 10 110 110 DG DG C . n F 6 11 DA 11 111 111 DA DA C . n F 6 12 DT 12 112 112 DT DT C . n F 6 13 DC 13 113 113 DC DC C . n F 6 14 DG 14 114 114 DG DG C . n F 6 15 DG 15 115 115 DG DG C . n F 6 16 DA 16 116 116 DA DA C . n F 6 17 DC 17 117 117 DC DC C . n F 6 18 DA 18 118 118 DA DA C . n F 6 19 DA 19 119 119 DA DA C . n F 6 20 DG 20 120 120 DG DG C . n F 6 21 DA 21 121 121 DA DA C . n G 7 1 DA 1 101 101 DA DA M . n G 7 2 DC 2 102 102 DC DC M . n G 7 3 DA 3 103 103 DA DA M . n G 7 4 DC 4 104 104 DC DC M . n G 7 5 DC 5 105 105 DC DC M . n G 7 6 DG 6 106 106 DG DG M . n G 7 7 DA 7 107 107 DA DA M . n G 7 8 DT 8 108 108 DT DT M . n G 7 9 DC 9 109 109 DC DC M . n G 7 10 DA 10 110 110 DA DA M . n G 7 11 DC 11 111 111 DC DC M . n G 7 12 DC 12 112 112 DC DC M . n G 7 13 DT 13 113 113 DT DT M . n G 7 14 DG 14 114 114 DG DG M . n G 7 15 DC 15 115 115 DC DC M . n G 7 16 DC 16 116 116 DC DC M . n G 7 17 DA 17 117 117 DA DA M . n # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.21.2_5419 ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? STARANISO ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 4 # _cell.angle_alpha 88.288 _cell.angle_alpha_esd ? _cell.angle_beta 89.973 _cell.angle_beta_esd ? _cell.angle_gamma 65.890 _cell.angle_gamma_esd ? _cell.entry_id 9PF5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 67.936 _cell.length_a_esd ? _cell.length_b 68.202 _cell.length_b_esd ? _cell.length_c 68.149 _cell.length_c_esd ? _cell.volume 288061.179 _cell.volume_esd ? _cell.Z_PDB 1 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9PF5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9PF5 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 7.70 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 84.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details '338-293 at 0.4/hr' _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM MOPS, 1.25 M magnesium sulfate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2025-05-28 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979338 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979338 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 104.20 _reflns.entry_id 9PF5 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 5.618 _reflns.d_resolution_low 62.219 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 2053 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 80.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.3 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.988 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 5.618 6.649 ? ? ? ? ? ? 205 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 1 0.468 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 14.057 62.219 ? ? ? ? ? ? 205 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 0.997 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 104.20 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9PF5 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 5.62 _refine.ls_d_res_low 46.15 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 2019 _refine.ls_number_reflns_R_free 86 _refine.ls_number_reflns_R_work 1933 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 59.43 _refine.ls_percent_reflns_R_free 4.26 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2534 _refine.ls_R_factor_R_free 0.2847 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2519 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.96 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 31.7604 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.6714 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 5.62 _refine_hist.d_res_low 46.15 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2485 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2485 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0063 ? 2784 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 0.8792 ? 4284 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.0474 ? 482 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.0046 ? 122 ? f_plane_restr ? ? ? 'X-RAY DIFFRACTION' ? 40.3352 ? 1299 ? f_dihedral_angle_d ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 5.62 _refine_ls_shell.d_res_low 46.15 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 86 _refine_ls_shell.number_reflns_R_work 1933 _refine_ls_shell.percent_reflns_obs 59.43 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2519 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.correlation_coeff_Fo_to_Fc ? _refine_ls_shell.correlation_coeff_Fo_to_Fc_free ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.2847 # _struct.entry_id 9PF5 _struct.title '[A4J] Asymmetric tensegrity triangle with a 4 nucleotide single stranded region adjacent to the junction' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9PF5 _struct_keywords.text 'tensegrity triangle, dna, single stranded' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9PF5 9PF5 ? 1 ? 1 2 PDB 9PF5 9PF5 ? 2 ? 1 3 PDB 9PF5 9PF5 ? 3 ? 1 4 PDB 9PF5 9PF5 ? 4 ? 1 5 PDB 9PF5 9PF5 ? 5 ? 1 6 PDB 9PF5 9PF5 ? 6 ? 1 7 PDB 9PF5 9PF5 ? 7 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9PF5 A 1 ? 21 ? 9PF5 101 ? 121 ? 101 121 2 2 9PF5 E 1 ? 14 ? 9PF5 101 ? 114 ? 101 114 3 3 9PF5 D 1 ? 14 ? 9PF5 101 ? 114 ? 101 114 4 4 9PF5 B 1 ? 21 ? 9PF5 101 ? 121 ? 101 121 5 5 9PF5 F 1 ? 14 ? 9PF5 101 ? 114 ? 101 114 6 6 9PF5 C 1 ? 21 ? 9PF5 101 ? 121 ? 101 121 7 7 9PF5 M 1 ? 17 ? 9PF5 101 ? 117 ? 101 117 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7150 ? 1 MORE -22 ? 1 'SSA (A^2)' 21420 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 14 N3 ? ? A DG 103 E DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 14 O2 ? ? A DG 103 E DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 14 N4 ? ? A DG 103 E DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 13 N1 ? ? A DC 104 E DG 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 13 O6 ? ? A DC 104 E DG 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 13 N2 ? ? A DC 104 E DG 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 12 N3 ? ? A DG 105 E DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 12 O2 ? ? A DG 105 E DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 12 N4 ? ? A DG 105 E DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 11 N3 ? ? A DA 106 E DT 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 11 O4 ? ? A DA 106 E DT 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 107 E DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 107 E DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 107 E DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 108 E DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 108 E DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 108 E DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DG 9 O6 ? ? A DT 109 E DG 109 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog19 hydrog ? ? A DT 9 O2 ? ? ? 1_555 B DG 9 N1 ? ? A DT 109 E DG 109 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog20 hydrog ? ? A DG 10 N1 ? ? ? 1_555 G DC 2 N3 ? ? A DG 110 M DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 10 N2 ? ? ? 1_555 G DC 2 O2 ? ? A DG 110 M DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 10 O6 ? ? ? 1_555 G DC 2 N4 ? ? A DG 110 M DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 11 N3 ? ? ? 1_555 G DA 1 N1 ? ? A DT 111 M DA 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 11 O4 ? ? ? 1_555 G DA 1 N6 ? ? A DT 111 M DA 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 16 N1 ? ? ? 1_555 C DT 8 N3 ? ? A DA 116 D DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 16 N6 ? ? ? 1_555 C DT 8 O4 ? ? A DA 116 D DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 17 N3 ? ? ? 1_555 C DG 7 N1 ? ? A DC 117 D DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 17 N4 ? ? ? 1_555 C DG 7 O6 ? ? A DC 117 D DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 17 O2 ? ? ? 1_555 C DG 7 N2 ? ? A DC 117 D DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 18 N1 ? ? ? 1_555 C DT 6 N3 ? ? A DA 118 D DT 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 18 N6 ? ? ? 1_555 C DT 6 O4 ? ? A DA 118 D DT 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 19 N3 ? ? ? 1_555 C DA 5 N1 ? ? A DT 119 D DA 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 19 O4 ? ? ? 1_555 C DA 5 N6 ? ? A DT 119 D DA 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 20 N3 ? ? ? 1_555 C DG 4 N1 ? ? A DC 120 D DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 20 N4 ? ? ? 1_555 C DG 4 O6 ? ? A DC 120 D DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 20 O2 ? ? ? 1_555 C DG 4 N2 ? ? A DC 120 D DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DA 21 N1 ? ? ? 1_555 C DT 3 N3 ? ? A DA 121 D DT 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DA 21 N6 ? ? ? 1_555 C DT 3 O4 ? ? A DA 121 D DT 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? D DT 9 N3 ? ? ? 1_555 G DA 17 N1 ? ? B DT 109 M DA 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? D DT 9 O4 ? ? ? 1_555 G DA 17 N6 ? ? B DT 109 M DA 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? D DG 10 N1 ? ? ? 1_555 G DC 16 N3 ? ? B DG 110 M DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? D DG 10 N2 ? ? ? 1_555 G DC 16 O2 ? ? B DG 110 M DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? D DG 10 O6 ? ? ? 1_555 G DC 16 N4 ? ? B DG 110 M DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? D DG 11 N1 ? ? ? 1_555 G DC 15 N3 ? ? B DG 111 M DC 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? D DG 11 N2 ? ? ? 1_555 G DC 15 O2 ? ? B DG 111 M DC 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? D DG 11 O6 ? ? ? 1_555 G DC 15 N4 ? ? B DG 111 M DC 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? D DC 12 N3 ? ? ? 1_555 G DG 14 N1 ? ? B DC 112 M DG 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? D DC 12 N4 ? ? ? 1_555 G DG 14 O6 ? ? B DC 112 M DG 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? D DC 12 O2 ? ? ? 1_555 G DG 14 N2 ? ? B DC 112 M DG 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? D DA 13 N1 ? ? ? 1_555 G DT 13 N3 ? ? B DA 113 M DT 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? D DA 13 N6 ? ? ? 1_555 G DT 13 O4 ? ? B DA 113 M DT 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? D DG 14 N1 ? ? ? 1_555 G DC 12 N3 ? ? B DG 114 M DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? D DG 14 N2 ? ? ? 1_555 G DC 12 O2 ? ? B DG 114 M DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? D DG 14 O6 ? ? ? 1_555 G DC 12 N4 ? ? B DG 114 M DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? D DG 15 N1 ? ? ? 1_555 G DC 11 N3 ? ? B DG 115 M DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? D DG 15 N2 ? ? ? 1_555 G DC 11 O2 ? ? B DG 115 M DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? D DG 15 O6 ? ? ? 1_555 G DC 11 N4 ? ? B DG 115 M DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? D DA 16 N1 ? ? ? 1_555 E DT 8 N3 ? ? B DA 116 F DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? D DA 16 N6 ? ? ? 1_555 E DT 8 O4 ? ? B DA 116 F DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? D DC 17 N3 ? ? ? 1_555 E DG 7 N1 ? ? B DC 117 F DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? D DC 17 N4 ? ? ? 1_555 E DG 7 O6 ? ? B DC 117 F DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? D DC 17 O2 ? ? ? 1_555 E DG 7 N2 ? ? B DC 117 F DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? D DG 18 N1 ? ? ? 1_555 E DC 6 N3 ? ? B DG 118 F DC 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? D DG 18 N2 ? ? ? 1_555 E DC 6 O2 ? ? B DG 118 F DC 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? D DG 18 O6 ? ? ? 1_555 E DC 6 N4 ? ? B DG 118 F DC 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? D DA 19 N1 ? ? ? 1_555 E DT 5 N3 ? ? B DA 119 F DT 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? D DA 19 N6 ? ? ? 1_555 E DT 5 O4 ? ? B DA 119 F DT 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? D DC 20 N3 ? ? ? 1_555 E DG 4 N1 ? ? B DC 120 F DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? D DC 20 N4 ? ? ? 1_555 E DG 4 O6 ? ? B DC 120 F DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? D DC 20 O2 ? ? ? 1_555 E DG 4 N2 ? ? B DC 120 F DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? F DG 10 N1 ? ? ? 1_555 G DC 9 N3 ? ? C DG 110 M DC 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? F DG 10 N2 ? ? ? 1_555 G DC 9 O2 ? ? C DG 110 M DC 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? F DG 10 O6 ? ? ? 1_555 G DC 9 N4 ? ? C DG 110 M DC 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? F DA 11 N1 ? ? ? 1_555 G DT 8 N3 ? ? C DA 111 M DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? F DA 11 N6 ? ? ? 1_555 G DT 8 O4 ? ? C DA 111 M DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? F DT 12 N3 ? ? ? 1_555 G DA 7 N1 ? ? C DT 112 M DA 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? F DT 12 O4 ? ? ? 1_555 G DA 7 N6 ? ? C DT 112 M DA 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? F DC 13 N3 ? ? ? 1_555 G DG 6 N1 ? ? C DC 113 M DG 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? F DC 13 N4 ? ? ? 1_555 G DG 6 O6 ? ? C DC 113 M DG 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? F DC 13 O2 ? ? ? 1_555 G DG 6 N2 ? ? C DC 113 M DG 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? F DG 14 N1 ? ? ? 1_555 G DC 5 N3 ? ? C DG 114 M DC 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? F DG 14 N2 ? ? ? 1_555 G DC 5 O2 ? ? C DG 114 M DC 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? F DG 14 O6 ? ? ? 1_555 G DC 5 N4 ? ? C DG 114 M DC 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? F DG 15 N1 ? ? ? 1_555 G DC 4 N3 ? ? C DG 115 M DC 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? F DG 15 N2 ? ? ? 1_555 G DC 4 O2 ? ? C DG 115 M DC 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? F DG 15 O6 ? ? ? 1_555 G DC 4 N4 ? ? C DG 115 M DC 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 8 N3 ? ? D DG 109 B DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 8 O2 ? ? D DG 109 B DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 8 N4 ? ? D DG 109 B DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? C DG 10 N1 ? ? ? 1_555 D DC 7 N3 ? ? D DG 110 B DC 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? C DG 10 N2 ? ? ? 1_555 D DC 7 O2 ? ? D DG 110 B DC 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? C DG 10 O6 ? ? ? 1_555 D DC 7 N4 ? ? D DG 110 B DC 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? C DT 11 N3 ? ? ? 1_555 D DA 6 N1 ? ? D DT 111 B DA 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? C DT 11 O4 ? ? ? 1_555 D DA 6 N6 ? ? D DT 111 B DA 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? C DA 12 N1 ? ? ? 1_555 D DT 5 N3 ? ? D DA 112 B DT 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? C DA 12 N6 ? ? ? 1_555 D DT 5 O4 ? ? D DA 112 B DT 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? C DG 13 N1 ? ? ? 1_555 D DC 4 N3 ? ? D DG 113 B DC 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? C DG 13 N2 ? ? ? 1_555 D DC 4 O2 ? ? D DG 113 B DC 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? C DG 13 O6 ? ? ? 1_555 D DC 4 N4 ? ? D DG 113 B DC 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? C DG 14 N2 ? ? ? 1_555 D DC 3 N3 ? ? D DG 114 B DC 103 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog101 hydrog ? ? B DT 3 N3 ? ? ? 1_555 F DA 21 N1 ? ? E DT 103 C DA 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B DT 3 O4 ? ? ? 1_555 F DA 21 N6 ? ? E DT 103 C DA 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B DC 4 N3 ? ? ? 1_555 F DG 20 N1 ? ? E DC 104 C DG 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B DC 4 N4 ? ? ? 1_555 F DG 20 O6 ? ? E DC 104 C DG 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B DC 4 O2 ? ? ? 1_555 F DG 20 N2 ? ? E DC 104 C DG 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? B DT 5 N3 ? ? ? 1_555 F DA 19 N1 ? ? E DT 105 C DA 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? B DT 5 O4 ? ? ? 1_555 F DA 19 N6 ? ? E DT 105 C DA 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? B DT 6 N3 ? ? ? 1_555 F DA 18 N1 ? ? E DT 106 C DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? B DT 6 O4 ? ? ? 1_555 F DA 18 N6 ? ? E DT 106 C DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? B DG 7 N1 ? ? ? 1_555 F DC 17 N3 ? ? E DG 107 C DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? B DG 7 N2 ? ? ? 1_555 F DC 17 O2 ? ? E DG 107 C DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B DG 7 O6 ? ? ? 1_555 F DC 17 N4 ? ? E DG 107 C DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? B DT 8 N3 ? ? ? 1_555 F DA 16 N1 ? ? E DT 108 C DA 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? B DT 8 O4 ? ? ? 1_555 F DA 16 N6 ? ? E DT 108 C DA 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? E DG 9 N1 ? ? ? 1_555 F DC 8 N3 ? ? F DG 109 C DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? E DG 9 N2 ? ? ? 1_555 F DC 8 O2 ? ? F DG 109 C DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? E DG 9 O6 ? ? ? 1_555 F DC 8 N4 ? ? F DG 109 C DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? E DG 10 N1 ? ? ? 1_555 F DC 7 N3 ? ? F DG 110 C DC 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? E DG 10 N2 ? ? ? 1_555 F DC 7 O2 ? ? F DG 110 C DC 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? E DG 10 O6 ? ? ? 1_555 F DC 7 N4 ? ? F DG 110 C DC 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? E DC 11 N3 ? ? ? 1_555 F DG 6 N2 ? ? F DC 111 C DG 106 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog122 hydrog ? ? E DT 12 N3 ? ? ? 1_555 F DA 5 N1 ? ? F DT 112 C DA 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? E DT 12 O4 ? ? ? 1_555 F DA 5 N6 ? ? F DT 112 C DA 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? E DC 13 N3 ? ? ? 1_555 F DG 4 N1 ? ? F DC 113 C DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? E DC 13 N4 ? ? ? 1_555 F DG 4 O6 ? ? F DC 113 C DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? E DC 13 O2 ? ? ? 1_555 F DG 4 N2 ? ? F DC 113 C DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? E DG 14 N1 ? ? ? 1_555 F DC 3 N3 ? ? F DG 114 C DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? E DG 14 N2 ? ? ? 1_555 F DC 3 O2 ? ? F DG 114 C DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? E DG 14 O6 ? ? ? 1_555 F DC 3 N4 ? ? F DG 114 C DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 9PF5 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 107 ? ? "C1'" A DC 107 ? ? N1 A DC 107 ? ? 110.13 108.30 1.83 0.30 N 2 1 "C3'" E DC 104 ? ? "C2'" E DC 104 ? ? "C1'" E DC 104 ? ? 97.49 102.40 -4.91 0.80 N 3 1 "O4'" E DC 104 ? ? "C1'" E DC 104 ? ? N1 E DC 104 ? ? 111.53 108.30 3.23 0.30 N 4 1 "O4'" E DT 105 ? ? "C1'" E DT 105 ? ? N1 E DT 105 ? ? 111.37 108.30 3.07 0.30 N 5 1 "O4'" D DT 103 ? ? "C1'" D DT 103 ? ? N1 D DT 103 ? ? 110.81 108.30 2.51 0.30 N 6 1 "O4'" D DA 105 ? ? "C1'" D DA 105 ? ? N9 D DA 105 ? ? 110.75 108.30 2.45 0.30 N 7 1 "O4'" B DC 107 ? ? "C1'" B DC 107 ? ? N1 B DC 107 ? ? 110.88 108.30 2.58 0.30 N 8 1 "O4'" B DG 111 ? ? "C1'" B DG 111 ? ? N9 B DG 111 ? ? 110.83 108.30 2.53 0.30 N 9 1 "O4'" C DC 107 ? ? "C1'" C DC 107 ? ? N1 C DC 107 ? ? 110.82 108.30 2.52 0.30 N 10 1 "O4'" C DA 111 ? ? "C1'" C DA 111 ? ? N9 C DA 111 ? ? 112.27 108.30 3.97 0.30 N 11 1 "O4'" C DG 120 ? ? "C1'" C DG 120 ? ? N9 C DG 120 ? ? 110.25 108.30 1.95 0.30 N # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -12.1517465365 -12.5980834575 -4.62332203652 0.989810364351 ? -1.83277310256 ? -1.02067028965 ? 0.987035854791 ? 0.390539186433 ? 3.14694524539 ? 1.31178658633 ? 0.405731298791 ? 0.0992749613256 ? 0.440368668085 ? 0.303919419506 ? 0.217730458336 ? 0.305314518428 ? -1.15107344982 ? -0.377886687495 ? -0.024066820326 ? -0.300382599503 ? -0.569085408105 ? 0.656425211673 ? -0.269269520705 ? -0.307954255052 ? 2 'X-RAY DIFFRACTION' ? refined -4.5074840815 -20.9071792008 6.91331169202 0.956937212446 ? -0.491919263456 ? -0.275815533553 ? -1.07994841478 ? 1.34136737134 ? 0.449278530528 ? 1.24686592786 ? 0.449524059149 ? -0.474322767672 ? 2.3774878131 ? -0.214218466268 ? 1.73340189623 ? 0.628713054222 ? -0.459773910176 ? 0.0801713058505 ? 0.347578648476 ? 0.0777326578772 ? 0.677710064903 ? 0.971236236113 ? -0.154156343979 ? 1.04747276892 ? 3 'X-RAY DIFFRACTION' ? refined -12.8477952733 -6.37974343944 -23.9978974643 -2.896392267 ? 1.13545200647 ? 0.413685532116 ? 2.53130596967 ? 0.176269783185 ? 0.0883467977295 ? 1.27928350291 ? -0.110468829383 ? 0.219252437495 ? 0.953136800925 ? 0.555940353897 ? 0.764977303197 ? 0.651601712741 ? 0.58486469027 ? 0.375419426554 ? -0.0679334353252 ? -0.233447516799 ? -0.195471700195 ? 0.200328628978 ? -0.0632052776082 ? -0.28373759194 ? 4 'X-RAY DIFFRACTION' ? refined 2.46013109529 4.39852561625 -15.9328203349 -2.68244601807 ? -3.20396719174 ? -1.46847892475 ? -1.24182114662 ? 0.141641959473 ? -0.980681590115 ? 0.854251885431 ? -0.991788260308 ? -1.06064492152 ? 5.16572713292 ? 0.733526906921 ? 3.57244700042 ? 0.957840585736 ? 1.41409660532 ? -0.0752270348755 ? -2.68375826676 ? -0.276930491723 ? 3.37348733712 ? -0.716828691631 ? -3.00636962353 ? 1.20893419852 ? 5 'X-RAY DIFFRACTION' ? refined 24.2760838718 7.34369537772 -4.83336472081 -2.27503568434 ? -5.15372742504 ? -0.877775366569 ? -0.390621319 ? 0.472180513585 ? 1.7403531218 ? 0.875771537377 ? 0.483368478051 ? -0.138252284896 ? 0.623619499952 ? 0.462441501807 ? 1.23989832541 ? 1.30610900496 ? 0.0653538028767 ? -0.0687691891989 ? 0.00438017755365 ? 0.690661698115 ? -0.519941119218 ? 0.033528082365 ? 0.287355407729 ? 0.232574751111 ? 6 'X-RAY DIFFRACTION' ? refined 12.498818355 -5.75915976175 4.66034437576 -1.68274433348 ? -2.13654840187 ? 0.656923979466 ? -3.85801302183 ? 0.317320813761 ? -1.29192862228 ? 0.624707166894 ? -0.42689635284 ? 0.715687137099 ? 0.379549925779 ? -0.215195331401 ? 2.46827446155 ? -1.59591053176 ? 0.636234308582 ? 0.119092530518 ? 0.570229674739 ? -0.0348820028315 ? -0.60906140184 ? -1.52952984525 ? 1.79767120473 ? -1.46412572228 ? 7 'X-RAY DIFFRACTION' ? refined 6.06362789992 -3.9496241782 -4.50419076002 -2.62000094087 ? -1.79590056324 ? -1.27636874932 ? -2.25296825436 ? 0.245194707144 ? 0.461898732447 ? 0.633466140074 ? -0.0655667380096 ? 0.278067999395 ? 0.289345641543 ? -0.420628368173 ? 0.88224901995 ? 1.59790657875 ? 0.389138442018 ? 0.448187488011 ? 0.558706742689 ? -0.670450172362 ? 0.676972892493 ? 0.282226083058 ? -0.955619487899 ? 0.780929935721 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A ? A 101 ? A ? A 121 ? ? ;(chain 'A' and resid 101 through 121) ; 2 'X-RAY DIFFRACTION' 2 B ? E 101 ? B ? E 114 ? ? ;(chain 'E' and resid 101 through 114) ; 3 'X-RAY DIFFRACTION' 3 C ? D 101 ? C ? D 114 ? ? ;(chain 'D' and resid 101 through 114) ; 4 'X-RAY DIFFRACTION' 4 D ? B 101 ? D ? B 121 ? ? ;(chain 'B' and resid 101 through 121) ; 5 'X-RAY DIFFRACTION' 5 E ? F 101 ? E ? F 114 ? ? ;(chain 'F' and resid 101 through 114) ; 6 'X-RAY DIFFRACTION' 6 F ? C 101 ? F ? C 121 ? ? ;(chain 'C' and resid 101 through 121) ; 7 'X-RAY DIFFRACTION' 7 G ? M 101 ? G ? M 117 ? ? ;(chain 'M' and resid 101 through 117) ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9PF5 'double helix' 9PF5 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 3 1_555 B DC 14 1_555 -0.239 -0.164 -0.031 -1.538 -1.250 -0.002 1 A_DG103:DC114_E A 103 ? E 114 ? 19 1 1 A DC 4 1_555 B DG 13 1_555 0.185 -0.159 -0.009 0.107 -0.102 -1.021 2 A_DC104:DG113_E A 104 ? E 113 ? 19 1 1 A DG 5 1_555 B DC 12 1_555 -0.148 -0.151 0.002 1.348 1.401 -2.953 3 A_DG105:DC112_E A 105 ? E 112 ? 19 1 1 A DA 6 1_555 B DT 11 1_555 0.201 -0.044 0.044 8.675 -4.027 -4.064 4 A_DA106:DT111_E A 106 ? E 111 ? 20 1 1 A DC 7 1_555 B DG 10 1_555 0.301 -0.139 -0.363 12.222 -14.473 3.948 5 A_DC107:DG110_E A 107 ? E 110 ? 19 1 1 A DC 8 1_555 B DG 9 1_555 0.069 -0.351 -1.249 0.527 6.703 -8.981 6 A_DC108:DG109_E A 108 ? E 109 ? 19 1 1 A DG 10 1_555 G DC 2 1_555 -0.217 -0.284 -0.044 0.886 2.176 -3.639 7 A_DG110:DC102_M A 110 ? M 102 ? 19 1 1 A DT 11 1_555 G DA 1 1_555 -0.006 -0.123 0.243 6.088 4.314 -2.528 8 A_DT111:DA101_M A 111 ? M 101 ? 20 1 1 A DA 16 1_555 C DT 8 1_555 0.090 -0.128 0.048 0.655 -3.569 0.005 9 A_DA116:DT108_D A 116 ? D 108 ? 20 1 1 A DC 17 1_555 C DG 7 1_555 0.219 -0.117 0.149 1.150 -3.286 1.843 10 A_DC117:DG107_D A 117 ? D 107 ? 19 1 1 A DA 18 1_555 C DT 6 1_555 0.097 -0.086 0.137 0.406 -2.378 0.823 11 A_DA118:DT106_D A 118 ? D 106 ? 20 1 1 A DT 19 1_555 C DA 5 1_555 -0.106 -0.073 -0.030 -0.355 -1.806 1.384 12 A_DT119:DA105_D A 119 ? D 105 ? 20 1 1 A DC 20 1_555 C DG 4 1_555 0.179 -0.129 0.169 0.450 -1.694 -0.191 13 A_DC120:DG104_D A 120 ? D 104 ? 19 1 1 A DA 21 1_555 C DT 3 1_555 0.022 -0.102 -0.044 -4.585 -3.660 2.961 14 A_DA121:DT103_D A 121 ? D 103 ? 20 1 1 B DT 3 1_555 F DA 21 1_555 -0.044 -0.114 -0.228 3.568 -0.384 4.669 15 E_DT103:DA121_C E 103 ? C 121 ? 20 1 1 B DC 4 1_555 F DG 20 1_555 0.256 -0.102 0.058 3.329 4.020 2.584 16 E_DC104:DG120_C E 104 ? C 120 ? 19 1 1 B DT 5 1_555 F DA 19 1_555 -0.111 -0.055 -0.056 2.863 -0.066 0.063 17 E_DT105:DA119_C E 105 ? C 119 ? 20 1 1 B DT 6 1_555 F DA 18 1_555 -0.087 -0.053 -0.055 2.259 -2.161 -2.407 18 E_DT106:DA118_C E 106 ? C 118 ? 20 1 1 B DG 7 1_555 F DC 17 1_555 -0.214 -0.071 -0.130 -5.183 -2.873 1.383 19 E_DG107:DC117_C E 107 ? C 117 ? 19 1 1 B DT 8 1_555 F DA 16 1_555 -0.127 -0.054 -0.022 3.561 -3.271 -3.584 20 E_DT108:DA116_C E 108 ? C 116 ? 20 1 1 G DC 4 1_555 F DG 15 1_555 0.160 -0.153 -0.362 5.546 -4.128 -1.359 21 M_DC104:DG115_C M 104 ? C 115 ? 19 1 1 G DC 5 1_555 F DG 14 1_555 0.231 -0.078 -0.131 7.082 -6.748 -0.945 22 M_DC105:DG114_C M 105 ? C 114 ? 19 1 1 G DG 6 1_555 F DC 13 1_555 -0.189 -0.134 0.113 0.886 -2.121 1.518 23 M_DG106:DC113_C M 106 ? C 113 ? 19 1 1 G DA 7 1_555 F DT 12 1_555 0.291 -0.105 0.225 -1.869 -0.932 -1.871 24 M_DA107:DT112_C M 107 ? C 112 ? 20 1 1 G DT 8 1_555 F DA 11 1_555 -0.141 0.043 -0.272 2.256 -0.290 -0.808 25 M_DT108:DA111_C M 108 ? C 111 ? 20 1 1 G DC 9 1_555 F DG 10 1_555 0.261 -0.236 -0.740 11.690 -5.738 0.781 26 M_DC109:DG110_C M 109 ? C 110 ? 19 1 1 D DC 3 1_555 C DG 14 1_555 -2.013 0.685 0.188 -0.225 -1.398 20.267 27 B_DC103:DG114_D B 103 ? D 114 ? ? 1 1 D DC 4 1_555 C DG 13 1_555 0.191 -0.130 0.110 1.693 1.555 -0.065 28 B_DC104:DG113_D B 104 ? D 113 ? 19 1 1 D DT 5 1_555 C DA 12 1_555 -0.038 -0.170 0.081 3.580 -2.957 2.332 29 B_DT105:DA112_D B 105 ? D 112 ? 20 1 1 D DA 6 1_555 C DT 11 1_555 0.258 -0.064 -0.026 6.067 -3.618 -12.566 30 B_DA106:DT111_D B 106 ? D 111 ? 20 1 1 D DC 7 1_555 C DG 10 1_555 0.246 -0.061 -0.083 8.066 -9.574 2.639 31 B_DC107:DG110_D B 107 ? D 110 ? 19 1 1 D DC 8 1_555 C DG 9 1_555 0.082 -0.102 0.385 -5.593 -6.653 -2.935 32 B_DC108:DG109_D B 108 ? D 109 ? 19 1 1 D DT 9 1_555 G DA 17 1_555 -0.095 -0.226 0.154 -0.467 -1.947 1.643 33 B_DT109:DA117_M B 109 ? M 117 ? 20 1 1 D DG 10 1_555 G DC 16 1_555 -0.257 -0.149 -0.272 -3.439 -1.012 1.913 34 B_DG110:DC116_M B 110 ? M 116 ? 19 1 1 D DG 11 1_555 G DC 15 1_555 -0.222 -0.126 0.082 -0.388 3.022 1.354 35 B_DG111:DC115_M B 111 ? M 115 ? 19 1 1 D DC 12 1_555 G DG 14 1_555 0.183 -0.160 -0.045 2.740 0.701 0.040 36 B_DC112:DG114_M B 112 ? M 114 ? 19 1 1 D DA 13 1_555 G DT 13 1_555 0.034 -0.052 -0.042 -1.059 -0.563 -3.815 37 B_DA113:DT113_M B 113 ? M 113 ? 20 1 1 D DG 14 1_555 G DC 12 1_555 -0.201 -0.199 -0.316 -2.663 -2.933 -1.358 38 B_DG114:DC112_M B 114 ? M 112 ? 19 1 1 D DG 15 1_555 G DC 11 1_555 -0.218 -0.175 -0.429 1.767 -3.790 1.165 39 B_DG115:DC111_M B 115 ? M 111 ? 19 1 1 D DA 16 1_555 E DT 8 1_555 0.085 -0.094 -0.003 0.183 -5.227 -4.992 40 B_DA116:DT108_F B 116 ? F 108 ? 20 1 1 D DC 17 1_555 E DG 7 1_555 0.221 -0.122 0.145 -0.686 0.027 1.693 41 B_DC117:DG107_F B 117 ? F 107 ? 19 1 1 D DG 18 1_555 E DC 6 1_555 -0.213 -0.157 -0.066 -0.214 -5.747 1.646 42 B_DG118:DC106_F B 118 ? F 106 ? 19 1 1 D DA 19 1_555 E DT 5 1_555 0.091 -0.095 -0.025 0.903 -5.646 2.728 43 B_DA119:DT105_F B 119 ? F 105 ? 20 1 1 D DC 20 1_555 E DG 4 1_555 0.256 -0.099 0.138 -1.841 -6.807 1.816 44 B_DC120:DG104_F B 120 ? F 104 ? 19 1 1 E DG 9 1_555 F DC 8 1_555 -0.203 -0.119 -0.205 -4.282 -1.601 0.807 45 F_DG109:DC108_C F 109 ? C 108 ? 19 1 1 E DG 10 1_555 F DC 7 1_555 -0.261 -0.141 0.096 -0.132 -0.789 5.752 46 F_DG110:DC107_C F 110 ? C 107 ? 19 1 1 E DC 11 1_555 F DG 6 1_555 -3.048 0.423 0.423 -13.048 12.441 11.671 47 F_DC111:DG106_C F 111 ? C 106 ? ? ? 1 E DT 12 1_555 F DA 5 1_555 0.033 -0.140 0.197 2.652 8.575 2.652 48 F_DT112:DA105_C F 112 ? C 105 ? 20 1 1 E DC 13 1_555 F DG 4 1_555 0.174 -0.071 0.101 -2.619 0.358 -0.342 49 F_DC113:DG104_C F 113 ? C 104 ? 19 1 1 E DG 14 1_555 F DC 3 1_555 -0.234 -0.130 0.195 -0.321 1.547 1.152 50 F_DG114:DC103_C F 114 ? C 103 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 3 1_555 B DC 14 1_555 A DC 4 1_555 B DG 13 1_555 0.328 0.377 3.444 1.490 3.805 32.662 -0.024 -0.310 3.475 6.732 -2.637 32.910 1 AA_DG103DC104:DG113DC114_EE A 103 ? E 114 ? A 104 ? E 113 ? 1 A DC 4 1_555 B DG 13 1_555 A DG 5 1_555 B DC 12 1_555 -1.027 -0.718 2.909 -1.810 7.471 34.552 -2.145 1.457 2.748 12.388 3.001 35.371 2 AA_DC104DG105:DC112DG113_EE A 104 ? E 113 ? A 105 ? E 112 ? 1 A DG 5 1_555 B DC 12 1_555 A DA 6 1_555 B DT 11 1_555 0.130 -0.271 3.170 3.043 4.621 26.812 -1.679 0.454 3.076 9.832 -6.474 27.367 3 AA_DG105DA106:DT111DC112_EE A 105 ? E 112 ? A 106 ? E 111 ? 1 A DA 6 1_555 B DT 11 1_555 A DC 7 1_555 B DG 10 1_555 0.958 -1.129 3.353 7.860 -4.842 33.841 -1.086 -0.312 3.601 -8.133 -13.201 35.042 4 AA_DA106DC107:DG110DT111_EE A 106 ? E 111 ? A 107 ? E 110 ? 1 A DC 7 1_555 B DG 10 1_555 A DC 8 1_555 B DG 9 1_555 0.711 -0.588 4.810 7.619 -32.145 36.136 3.237 0.072 4.110 -42.538 -10.083 48.585 5 AA_DC107DC108:DG109DG110_EE A 107 ? E 110 ? A 108 ? E 109 ? 1 A DC 8 1_555 B DG 9 1_555 A DG 10 1_555 G DC 2 1_555 -0.198 -2.951 4.586 12.508 71.116 53.021 -3.889 0.451 0.718 57.647 -10.139 87.395 6 AA_DC108DG110:DC102DG109_ME A 108 ? E 109 ? A 110 ? M 102 ? 1 A DG 10 1_555 G DC 2 1_555 A DT 11 1_555 G DA 1 1_555 0.719 -0.436 3.497 3.103 0.948 32.785 -0.943 -0.698 3.534 1.674 -5.481 32.941 7 AA_DG110DT111:DA101DC102_MM A 110 ? M 102 ? A 111 ? M 101 ? 1 A DA 16 1_555 C DT 8 1_555 A DC 17 1_555 C DG 7 1_555 -0.434 -0.310 3.184 -1.807 -0.058 30.799 -0.571 0.473 3.204 -0.110 3.399 30.851 8 AA_DA116DC117:DG107DT108_DD A 116 ? D 108 ? A 117 ? D 107 ? 1 A DC 17 1_555 C DG 7 1_555 A DA 18 1_555 C DT 6 1_555 -1.120 0.810 3.122 -1.360 7.268 35.369 0.293 1.617 3.259 11.803 2.209 36.109 9 AA_DC117DA118:DT106DG107_DD A 117 ? D 107 ? A 118 ? D 106 ? 1 A DA 18 1_555 C DT 6 1_555 A DT 19 1_555 C DA 5 1_555 0.600 -0.084 3.498 3.036 -0.376 34.579 -0.078 -0.505 3.537 -0.630 -5.095 34.710 10 AA_DA118DT119:DA105DT106_DD A 118 ? D 106 ? A 119 ? D 105 ? 1 A DT 19 1_555 C DA 5 1_555 A DC 20 1_555 C DG 4 1_555 -0.574 0.435 3.433 2.618 0.718 31.059 0.667 1.588 3.383 1.338 -4.877 31.174 11 AA_DT119DC120:DG104DA105_DD A 119 ? D 105 ? A 120 ? D 104 ? 1 A DC 20 1_555 C DG 4 1_555 A DA 21 1_555 C DT 3 1_555 -0.239 0.121 3.200 2.302 1.172 41.473 0.050 0.576 3.185 1.653 -3.247 41.549 12 AA_DC120DA121:DT103DG104_DD A 120 ? D 104 ? A 121 ? D 103 ? 1 B DT 3 1_555 F DA 21 1_555 B DC 4 1_555 F DG 20 1_555 -0.654 0.020 3.448 -5.818 11.162 27.062 -2.475 -0.038 3.271 22.380 11.664 29.797 13 EE_DT103DC104:DG120DA121_CC E 103 ? C 121 ? E 104 ? C 120 ? 1 B DC 4 1_555 F DG 20 1_555 B DT 5 1_555 F DA 19 1_555 -0.194 -1.104 3.110 3.003 2.833 25.351 -3.226 1.223 2.929 6.402 -6.786 25.679 14 EE_DC104DT105:DA119DG120_CC E 104 ? C 120 ? E 105 ? C 119 ? 1 B DT 5 1_555 F DA 19 1_555 B DT 6 1_555 F DA 18 1_555 -0.775 -0.752 3.123 0.013 2.097 32.943 -1.661 1.367 3.070 3.694 -0.022 33.008 15 EE_DT105DT106:DA118DA119_CC E 105 ? C 119 ? E 106 ? C 118 ? 1 B DT 6 1_555 F DA 18 1_555 B DG 7 1_555 F DC 17 1_555 1.155 -0.426 3.150 1.738 8.462 33.556 -1.963 -1.684 3.012 14.363 -2.950 34.620 16 EE_DT106DG107:DC117DA118_CC E 106 ? C 118 ? E 107 ? C 117 ? 1 B DG 7 1_555 F DC 17 1_555 B DT 8 1_555 F DA 16 1_555 -1.502 -0.183 3.146 0.953 4.373 34.288 -0.950 2.667 3.058 7.378 -1.607 34.571 17 EE_DG107DT108:DA116DC117_CC E 107 ? C 117 ? E 108 ? C 116 ? 1 B DT 8 1_555 F DA 16 1_555 G DC 4 1_555 F DG 15 1_555 0.392 -0.588 2.950 3.767 1.525 30.565 -1.375 -0.074 2.944 2.877 -7.106 30.828 18 EM_DT108DC104:DG115DA116_CC E 108 ? C 116 ? M 104 ? C 115 ? 1 G DC 4 1_555 F DG 15 1_555 G DC 5 1_555 F DG 14 1_555 0.556 1.110 3.486 7.414 2.392 39.451 1.319 0.110 3.587 3.501 -10.855 40.183 19 MM_DC104DC105:DG114DG115_CC M 104 ? C 115 ? M 105 ? C 114 ? 1 G DC 5 1_555 F DG 14 1_555 G DG 6 1_555 F DC 13 1_555 0.362 2.636 3.776 3.665 -1.501 37.757 4.272 -0.021 3.690 -2.312 -5.645 37.957 20 MM_DC105DG106:DC113DG114_CC M 105 ? C 114 ? M 106 ? C 113 ? 1 G DG 6 1_555 F DC 13 1_555 G DA 7 1_555 F DT 12 1_555 -0.324 -0.542 3.162 -3.716 8.464 33.553 -2.139 0.002 2.960 14.327 6.291 34.768 21 MM_DG106DA107:DT112DC113_CC M 106 ? C 113 ? M 107 ? C 112 ? 1 G DA 7 1_555 F DT 12 1_555 G DT 8 1_555 F DA 11 1_555 1.200 -1.371 3.267 5.179 5.139 32.856 -3.205 -1.232 3.169 8.948 -9.018 33.635 22 MM_DA107DT108:DA111DT112_CC M 107 ? C 112 ? M 108 ? C 111 ? 1 G DT 8 1_555 F DA 11 1_555 G DC 9 1_555 F DG 10 1_555 -0.254 1.097 3.348 1.405 3.533 36.774 1.236 0.598 3.423 5.581 -2.220 36.963 23 MM_DT108DC109:DG110DA111_CC M 108 ? C 111 ? M 109 ? C 110 ? 1 D DC 3 1_555 C DG 14 1_555 D DC 4 1_555 C DG 13 1_555 -1.123 0.371 3.235 -2.314 2.514 34.601 0.235 1.525 3.319 4.215 3.878 34.764 24 BB_DC103DC104:DG113DG114_DD B 103 ? D 114 ? B 104 ? D 113 ? 1 D DC 4 1_555 C DG 13 1_555 D DT 5 1_555 C DA 12 1_555 0.679 -1.063 3.145 1.692 4.833 32.755 -2.632 -0.922 2.992 8.505 -2.978 33.142 25 BB_DC104DT105:DA112DG113_DD B 104 ? D 113 ? B 105 ? D 112 ? 1 D DT 5 1_555 C DA 12 1_555 D DA 6 1_555 C DT 11 1_555 -1.644 0.773 2.970 -0.551 7.510 33.827 0.215 2.683 3.091 12.712 0.933 34.631 26 BB_DT105DA106:DT111DA112_DD B 105 ? D 112 ? B 106 ? D 111 ? 1 D DA 6 1_555 C DT 11 1_555 D DC 7 1_555 C DG 10 1_555 2.114 -0.419 3.248 2.966 2.961 35.336 -1.123 -3.022 3.364 4.856 -4.865 35.576 27 BB_DA106DC107:DG110DT111_DD B 106 ? D 111 ? B 107 ? D 110 ? 1 D DC 7 1_555 C DG 10 1_555 D DC 8 1_555 C DG 9 1_555 0.751 -0.828 3.518 -2.594 -5.891 37.917 -0.460 -1.492 3.545 -8.986 3.957 38.439 28 BB_DC107DC108:DG109DG110_DD B 107 ? D 110 ? B 108 ? D 109 ? 1 D DC 8 1_555 C DG 9 1_555 D DT 9 1_555 G DA 17 1_555 -2.562 -0.619 3.094 2.552 3.822 10.417 -7.655 15.946 2.052 19.832 -13.241 11.383 29 BB_DC108DT109:DA117DG109_MD B 108 ? D 109 ? B 109 ? M 117 ? 1 D DT 9 1_555 G DA 17 1_555 D DG 10 1_555 G DC 16 1_555 0.733 -0.472 3.115 3.874 8.348 42.501 -1.406 -0.634 3.026 11.357 -5.270 43.441 30 BB_DT109DG110:DC116DA117_MM B 109 ? M 117 ? B 110 ? M 116 ? 1 D DG 10 1_555 G DC 16 1_555 D DG 11 1_555 G DC 15 1_555 -0.199 0.525 3.773 -0.735 0.525 37.965 0.729 0.198 3.783 0.806 1.130 37.975 31 BB_DG110DG111:DC115DC116_MM B 110 ? M 116 ? B 111 ? M 115 ? 1 D DG 11 1_555 G DC 15 1_555 D DC 12 1_555 G DG 14 1_555 -1.097 -0.785 3.385 -0.511 3.392 38.462 -1.617 1.595 3.320 5.137 0.774 38.609 32 BB_DG111DC112:DG114DC115_MM B 111 ? M 115 ? B 112 ? M 114 ? 1 D DC 12 1_555 G DG 14 1_555 D DA 13 1_555 G DT 13 1_555 -0.490 -1.012 3.390 -2.572 0.863 36.017 -1.759 0.413 3.391 1.394 4.152 36.116 33 BB_DC112DA113:DT113DG114_MM B 112 ? M 114 ? B 113 ? M 113 ? 1 D DA 13 1_555 G DT 13 1_555 D DG 14 1_555 G DC 12 1_555 -0.766 1.555 3.379 -0.573 -0.422 38.084 2.437 1.098 3.373 -0.647 0.879 38.091 34 BB_DA113DG114:DC112DT113_MM B 113 ? M 113 ? B 114 ? M 112 ? 1 D DG 14 1_555 G DC 12 1_555 D DG 15 1_555 G DC 11 1_555 0.485 -0.449 3.173 -2.105 1.684 38.115 -0.890 -0.996 3.120 2.575 3.219 38.207 35 BB_DG114DG115:DC111DC112_MM B 114 ? M 112 ? B 115 ? M 111 ? 1 D DG 15 1_555 G DC 11 1_555 D DA 16 1_555 E DT 8 1_555 -3.184 -1.507 3.010 -12.613 -0.445 18.955 -3.626 2.529 4.293 -1.195 33.864 22.740 36 BB_DG115DA116:DT108DC111_FM B 115 ? M 111 ? B 116 ? F 108 ? 1 D DA 16 1_555 E DT 8 1_555 D DC 17 1_555 E DG 7 1_555 0.407 -0.809 3.134 -1.344 0.505 31.069 -1.600 -1.004 3.101 0.942 2.507 31.102 37 BB_DA116DC117:DG107DT108_FF B 116 ? F 108 ? B 117 ? F 107 ? 1 D DC 17 1_555 E DG 7 1_555 D DG 18 1_555 E DC 6 1_555 -0.508 -0.504 2.818 1.571 10.575 30.853 -2.433 1.133 2.487 19.170 -2.849 32.610 38 BB_DC117DG118:DC106DG107_FF B 117 ? F 107 ? B 118 ? F 106 ? 1 D DG 18 1_555 E DC 6 1_555 D DA 19 1_555 E DT 5 1_555 0.383 1.079 3.475 2.058 -1.311 36.447 1.914 -0.311 3.451 -2.094 -3.286 36.526 39 BB_DG118DA119:DT105DC106_FF B 118 ? F 106 ? B 119 ? F 105 ? 1 D DA 19 1_555 E DT 5 1_555 D DC 20 1_555 E DG 4 1_555 -0.338 0.030 3.149 -1.809 -2.475 39.277 0.326 0.296 3.153 -3.675 2.686 39.392 40 BB_DA119DC120:DG104DT105_FF B 119 ? F 105 ? B 120 ? F 104 ? 1 E DG 9 1_555 F DC 8 1_555 E DG 10 1_555 F DC 7 1_555 0.653 0.394 3.142 -1.854 2.433 41.183 0.308 -1.117 3.128 3.453 2.632 41.292 41 FF_DG109DG110:DC107DC108_CC F 109 ? C 108 ? F 110 ? C 107 ? 1 E DG 10 1_555 F DC 7 1_555 E DC 11 1_555 F DG 6 1_555 -0.815 -1.455 3.435 -6.057 10.704 20.746 -6.860 0.044 2.528 26.888 15.215 24.083 42 FF_DG110DC111:DG106DC107_CC F 110 ? C 107 ? F 111 ? C 106 ? 1 E DC 11 1_555 F DG 6 1_555 E DT 12 1_555 F DA 5 1_555 -0.397 0.182 3.383 -4.367 2.642 37.111 -0.079 0.020 3.411 4.127 6.822 37.449 43 FF_DC111DT112:DA105DG106_CC F 111 ? C 106 ? F 112 ? C 105 ? 1 E DT 12 1_555 F DA 5 1_555 E DC 13 1_555 F DG 4 1_555 0.073 -1.210 3.208 4.627 15.796 41.654 -2.927 0.295 2.600 21.243 -6.223 44.654 44 FF_DT112DC113:DG104DA105_CC F 112 ? C 105 ? F 113 ? C 104 ? 1 E DC 13 1_555 F DG 4 1_555 E DG 14 1_555 F DC 3 1_555 0.080 -0.654 2.914 1.512 5.989 26.373 -2.718 0.162 2.702 12.903 -3.258 27.074 45 FF_DC113DG114:DC103DG104_CC F 113 ? C 104 ? F 114 ? C 103 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Office of Naval Research (ONR)' 'United States' N000141912596 1 'Department of Energy (DOE, United States)' 'United States' DE-SC0007991 2 'National Science Foundation (NSF, United States)' 'United States' CCF-2106790 3 'National Science Foundation (NSF, United States)' 'United States' GCR-2317843 4 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7U3O _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 1' _space_group.name_Hall 'P 1' _space_group.IT_number 1 _space_group.crystal_system triclinic _space_group.id 1 # _atom_sites.entry_id 9PF5 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.014720 _atom_sites.fract_transf_matrix[1][2] -0.006588 _atom_sites.fract_transf_matrix[1][3] 0.000207 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016064 _atom_sites.fract_transf_matrix[2][3] -0.000523 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014681 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 5.96793 ? ? ? 14.89577 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 14.90797 ? ? ? 11.91318 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #