data_9PV4 # _entry.id 9PV4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.408 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9PV4 pdb_00009pv4 10.2210/pdb9pv4/pdb WWPDB D_1000291782 ? ? EMDB EMD-71882 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-12-10 ? 2 'EM metadata' 1 0 2025-12-10 ? 3 FSC 1 0 2025-12-10 ? 4 'Half map' 1 0 2025-12-10 1 5 'Half map' 1 0 2025-12-10 2 6 Image 1 0 2025-12-10 ? 7 Mask 1 0 2025-12-10 1 8 'Primary map' 1 0 2025-12-10 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 Mask repository 'Initial release' ? ? 8 8 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9PV4 _pdbx_database_status.recvd_initial_deposition_date 2025-08-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'MPER-GT12 immunogen in complex with human Fab 10E8 and mouse Fab W6-10' _pdbx_database_related.db_id EMD-71882 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email andrew@scripps.edu _pdbx_contact_author.name_first Andrew _pdbx_contact_author.name_last Ward _pdbx_contact_author.name_mi B. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7153-3769 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Huang, J.' 1 0000-0001-7624-7390 'Ward, A.B.' 2 0000-0001-7153-3769 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_patent _citation.unpublished_flag ? ? ? ? ? ? ? ? ? ? primary 'To Be Published' ? 0353 ? ? ? ? ? ? ? 'Decipher antibody responses primed with scaffolds harboring the germline-targeting HIV Env MPER epitope by cryoEM' ? ? ? ? ? ? ? ? ? ? ? ? ? UK ? ? 1 'Nat Immunol' ? ? 1529-2916 ? ? 25 ? 1073 1082 'Vaccination induces broadly neutralizing antibody precursors to HIV gp41.' 2024 ? 10.1038/s41590-024-01833-w 38816615 ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huang, J.' 1 0000-0001-7624-7390 1 'Schiffner, T.' 2 ? 1 'Phung, I.' 3 0000-0001-7283-4766 1 'Ray, R.' 4 ? 1 'Irimia, A.' 5 ? 1 'Tian, M.' 6 ? 1 'Swanson, O.' 7 0000-0001-8162-8358 1 'Lee, J.H.' 8 ? 1 'Lee, C.D.' 9 0000-0002-5470-2484 1 'Marina-Zarate, E.' 10 0000-0003-1586-404X 1 'Cho, S.Y.' 11 ? 1 'Huang, J.' 12 ? 1 'Ozorowski, G.' 13 0000-0002-9695-8138 1 'Skog, P.D.' 14 ? 1 'Serra, A.M.' 15 ? 1 'Rantalainen, K.' 16 0000-0002-3158-9183 1 'Allen, J.D.' 17 0000-0003-2547-968X 1 'Baboo, S.' 18 0000-0002-4547-5160 1 'Rodriguez, O.L.' 19 0000-0002-4587-6124 1 'Himansu, S.' 20 0000-0002-7954-9674 1 'Zhou, J.' 21 ? 1 'Hurtado, J.' 22 ? 1 'Flynn, C.T.' 23 ? 1 'McKenney, K.' 24 ? 1 'Havenar-Daughton, C.' 25 ? 1 'Saha, S.' 26 0009-0004-7210-6338 1 'Shields, K.' 27 ? 1 'Schultze, S.' 28 ? 1 'Smith, M.L.' 29 ? 1 'Liang, C.H.' 30 ? 1 'Toy, L.' 31 ? 1 'Pecetta, S.' 32 0000-0001-9898-4324 1 'Lin, Y.C.' 33 0000-0002-3534-7974 1 'Willis, J.R.' 34 0000-0002-0135-5263 1 'Sesterhenn, F.' 35 ? 1 'Kulp, D.W.' 36 0000-0002-0527-3804 1 'Hu, X.' 37 ? 1 'Cottrell, C.A.' 38 0000-0002-3364-3083 1 'Zhou, X.' 39 ? 1 'Ruiz, J.' 40 ? 1 'Wang, X.' 41 ? 1 'Nair, U.' 42 ? 1 'Kirsch, K.H.' 43 ? 1 'Cheng, H.L.' 44 ? 1 'Davis, J.' 45 ? 1 'Kalyuzhniy, O.' 46 0000-0002-5273-1951 1 'Liguori, A.' 47 ? 1 'Diedrich, J.K.' 48 ? 1 'Ngo, J.T.' 49 ? 1 'Lewis, V.' 50 ? 1 'Phelps, N.' 51 ? 1 'Tingle, R.D.' 52 ? 1 'Spencer, S.' 53 ? 1 'Georgeson, E.' 54 0000-0001-5137-4625 1 'Adachi, Y.' 55 ? 1 'Kubitz, M.' 56 ? 1 'Eskandarzadeh, S.' 57 ? 1 'Elsliger, M.A.' 58 ? 1 'Amara, R.R.' 59 0000-0002-6309-6797 1 'Landais, E.' 60 0000-0002-8183-5565 1 'Briney, B.' 61 ? 1 'Burton, D.R.' 62 0000-0001-6711-9864 1 'Carnathan, D.G.' 63 ? 1 'Silvestri, G.' 64 0000-0001-6602-2470 1 'Watson, C.T.' 65 0000-0001-7248-8787 1 'Yates, J.R.' 66 0000-0001-5267-1672 1 'Paulson, J.C.' 67 0000-0003-4589-5322 1 'Crispin, M.' 68 0000-0002-1072-2694 1 'Grigoryan, G.' 69 0000-0003-4645-7666 1 'Ward, A.B.' 70 0000-0001-7153-3769 1 'Sok, D.' 71 0000-0002-9354-1740 1 'Alt, F.W.' 72 0000-0002-0583-1271 1 'Wilson, I.A.' 73 0000-0002-6469-2419 1 'Batista, F.D.' 74 0000-0002-1130-9463 1 'Crotty, S.' 75 0000-0002-6484-6262 1 'Schief, W.R.' 76 0000-0002-1120-0150 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'W6-10 mouse Fab heavy chain' 13161.798 1 ? ? ? ? 2 polymer man 'W6-10 mouse Fab light chain' 11657.868 1 ? ? ? ? 3 polymer man '10E8-GT12 immunogen' 18769.172 1 ? ? ? ? 4 polymer man '10E8 human Fab heavy chain' 14607.247 1 ? ? ? ? 5 polymer man '10E8 human Fab light chain' 11672.896 1 ? ? ? ? 6 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QVTLKESGPGILQPSQTLSLTCSFSGFSLSTFGMGVGWIRQPSGKGLEWLAHIWWDDDKFYNPALKSRLTISKDTSKNQV FLKIANVDTADTATYYCARIGEDYFLDVWGKGTTVTVSS ; ;QVTLKESGPGILQPSQTLSLTCSFSGFSLSTFGMGVGWIRQPSGKGLEWLAHIWWDDDKFYNPALKSRLTISKDTSKNQV FLKIANVDTADTATYYCARIGEDYFLDVWGKGTTVTVSS ; A ? 2 'polypeptide(L)' no no ;DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYNAKTLADGVPSRFSGSGSGTQYSLKINSLQP EDFGSYYCQHFWSAPYTFGGGTNLEIK ; ;DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYNAKTLADGVPSRFSGSGSGTQYSLKINSLQP EDFGSYYCQHFWSAPYTFGGGTNLEIK ; B ? 3 'polypeptide(L)' no no ;ETGNVTQEDIIRALASPLIKDGMVDEDFAEKVIENESRYPSGLQAKGVGFAIPHVLGDYVRDNAISVGILDKPVNFSEWY QSPDPVPVRVVFMLAIRTWDDITNVMNWIKDVVLDEEFMKRLLNMSDEEIYRQIYTRISKAPNLSGINFSREYVRHLNGS GGSGLN ; ;ETGNVTQEDIIRALASPLIKDGMVDEDFAEKVIENESRYPSGLQAKGVGFAIPHVLGDYVRDNAISVGILDKPVNFSEWY QSPDPVPVRVVFMLAIRTWDDITNVMNWIKDVVLDEEFMKRLLNMSDEEIYRQIYTRISKAPNLSGINFSREYVRHLNGS GGSGLN ; C ? 4 'polypeptide(L)' no no ;EVQLVESGGGLVKPGGSLRLSCSASGFDFDNAWMTWVRQPPGKGLEWVGRITGPGEGWSVDYAAPVEGRFTISRLNSINF LYLEMNNLRMEDSGLYFCARTGKYYDFWSGYPPGEEYFQDWGRGTLVTVSS ; ;EVQLVESGGGLVKPGGSLRLSCSASGFDFDNAWMTWVRQPPGKGLEWVGRITGPGEGWSVDYAAPVEGRFTISRLNSINF LYLEMNNLRMEDSGLYFCARTGKYYDFWSGYPPGEEYFQDWGRGTLVTVSS ; H ? 5 'polypeptide(L)' no no ;SYELTQETGVSVALGRTVTITCRGDSLRSHYASWYQKKPGQAPILLFYGKNNRPSGVPDRFSGSASGNRASLTISGAQAE DDAEYYCSSRDKSGSRLSVFGGGTKLTVL ; ;SYELTQETGVSVALGRTVTITCRGDSLRSHYASWYQKKPGQAPILLFYGKNNRPSGVPDRFSGSASGNRASLTISGAQAE DDAEYYCSSRDKSGSRLSVFGGGTKLTVL ; L ? # _pdbx_entity_nonpoly.entity_id 6 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 VAL n 1 3 THR n 1 4 LEU n 1 5 LYS n 1 6 GLU n 1 7 SER n 1 8 GLY n 1 9 PRO n 1 10 GLY n 1 11 ILE n 1 12 LEU n 1 13 GLN n 1 14 PRO n 1 15 SER n 1 16 GLN n 1 17 THR n 1 18 LEU n 1 19 SER n 1 20 LEU n 1 21 THR n 1 22 CYS n 1 23 SER n 1 24 PHE n 1 25 SER n 1 26 GLY n 1 27 PHE n 1 28 SER n 1 29 LEU n 1 30 SER n 1 31 THR n 1 32 PHE n 1 33 GLY n 1 34 MET n 1 35 GLY n 1 36 VAL n 1 37 GLY n 1 38 TRP n 1 39 ILE n 1 40 ARG n 1 41 GLN n 1 42 PRO n 1 43 SER n 1 44 GLY n 1 45 LYS n 1 46 GLY n 1 47 LEU n 1 48 GLU n 1 49 TRP n 1 50 LEU n 1 51 ALA n 1 52 HIS n 1 53 ILE n 1 54 TRP n 1 55 TRP n 1 56 ASP n 1 57 ASP n 1 58 ASP n 1 59 LYS n 1 60 PHE n 1 61 TYR n 1 62 ASN n 1 63 PRO n 1 64 ALA n 1 65 LEU n 1 66 LYS n 1 67 SER n 1 68 ARG n 1 69 LEU n 1 70 THR n 1 71 ILE n 1 72 SER n 1 73 LYS n 1 74 ASP n 1 75 THR n 1 76 SER n 1 77 LYS n 1 78 ASN n 1 79 GLN n 1 80 VAL n 1 81 PHE n 1 82 LEU n 1 83 LYS n 1 84 ILE n 1 85 ALA n 1 86 ASN n 1 87 VAL n 1 88 ASP n 1 89 THR n 1 90 ALA n 1 91 ASP n 1 92 THR n 1 93 ALA n 1 94 THR n 1 95 TYR n 1 96 TYR n 1 97 CYS n 1 98 ALA n 1 99 ARG n 1 100 ILE n 1 101 GLY n 1 102 GLU n 1 103 ASP n 1 104 TYR n 1 105 PHE n 1 106 LEU n 1 107 ASP n 1 108 VAL n 1 109 TRP n 1 110 GLY n 1 111 LYS n 1 112 GLY n 1 113 THR n 1 114 THR n 1 115 VAL n 1 116 THR n 1 117 VAL n 1 118 SER n 1 119 SER n 2 1 ASP n 2 2 ILE n 2 3 GLN n 2 4 MET n 2 5 THR n 2 6 GLN n 2 7 SER n 2 8 PRO n 2 9 ALA n 2 10 SER n 2 11 LEU n 2 12 SER n 2 13 ALA n 2 14 SER n 2 15 VAL n 2 16 GLY n 2 17 GLU n 2 18 THR n 2 19 VAL n 2 20 THR n 2 21 ILE n 2 22 THR n 2 23 CYS n 2 24 ARG n 2 25 ALA n 2 26 SER n 2 27 GLY n 2 28 ASN n 2 29 ILE n 2 30 HIS n 2 31 ASN n 2 32 TYR n 2 33 LEU n 2 34 ALA n 2 35 TRP n 2 36 TYR n 2 37 GLN n 2 38 GLN n 2 39 LYS n 2 40 GLN n 2 41 GLY n 2 42 LYS n 2 43 SER n 2 44 PRO n 2 45 GLN n 2 46 LEU n 2 47 LEU n 2 48 VAL n 2 49 TYR n 2 50 ASN n 2 51 ALA n 2 52 LYS n 2 53 THR n 2 54 LEU n 2 55 ALA n 2 56 ASP n 2 57 GLY n 2 58 VAL n 2 59 PRO n 2 60 SER n 2 61 ARG n 2 62 PHE n 2 63 SER n 2 64 GLY n 2 65 SER n 2 66 GLY n 2 67 SER n 2 68 GLY n 2 69 THR n 2 70 GLN n 2 71 TYR n 2 72 SER n 2 73 LEU n 2 74 LYS n 2 75 ILE n 2 76 ASN n 2 77 SER n 2 78 LEU n 2 79 GLN n 2 80 PRO n 2 81 GLU n 2 82 ASP n 2 83 PHE n 2 84 GLY n 2 85 SER n 2 86 TYR n 2 87 TYR n 2 88 CYS n 2 89 GLN n 2 90 HIS n 2 91 PHE n 2 92 TRP n 2 93 SER n 2 94 ALA n 2 95 PRO n 2 96 TYR n 2 97 THR n 2 98 PHE n 2 99 GLY n 2 100 GLY n 2 101 GLY n 2 102 THR n 2 103 ASN n 2 104 LEU n 2 105 GLU n 2 106 ILE n 2 107 LYS n 3 1 GLU n 3 2 THR n 3 3 GLY n 3 4 ASN n 3 5 VAL n 3 6 THR n 3 7 GLN n 3 8 GLU n 3 9 ASP n 3 10 ILE n 3 11 ILE n 3 12 ARG n 3 13 ALA n 3 14 LEU n 3 15 ALA n 3 16 SER n 3 17 PRO n 3 18 LEU n 3 19 ILE n 3 20 LYS n 3 21 ASP n 3 22 GLY n 3 23 MET n 3 24 VAL n 3 25 ASP n 3 26 GLU n 3 27 ASP n 3 28 PHE n 3 29 ALA n 3 30 GLU n 3 31 LYS n 3 32 VAL n 3 33 ILE n 3 34 GLU n 3 35 ASN n 3 36 GLU n 3 37 SER n 3 38 ARG n 3 39 TYR n 3 40 PRO n 3 41 SER n 3 42 GLY n 3 43 LEU n 3 44 GLN n 3 45 ALA n 3 46 LYS n 3 47 GLY n 3 48 VAL n 3 49 GLY n 3 50 PHE n 3 51 ALA n 3 52 ILE n 3 53 PRO n 3 54 HIS n 3 55 VAL n 3 56 LEU n 3 57 GLY n 3 58 ASP n 3 59 TYR n 3 60 VAL n 3 61 ARG n 3 62 ASP n 3 63 ASN n 3 64 ALA n 3 65 ILE n 3 66 SER n 3 67 VAL n 3 68 GLY n 3 69 ILE n 3 70 LEU n 3 71 ASP n 3 72 LYS n 3 73 PRO n 3 74 VAL n 3 75 ASN n 3 76 PHE n 3 77 SER n 3 78 GLU n 3 79 TRP n 3 80 TYR n 3 81 GLN n 3 82 SER n 3 83 PRO n 3 84 ASP n 3 85 PRO n 3 86 VAL n 3 87 PRO n 3 88 VAL n 3 89 ARG n 3 90 VAL n 3 91 VAL n 3 92 PHE n 3 93 MET n 3 94 LEU n 3 95 ALA n 3 96 ILE n 3 97 ARG n 3 98 THR n 3 99 TRP n 3 100 ASP n 3 101 ASP n 3 102 ILE n 3 103 THR n 3 104 ASN n 3 105 VAL n 3 106 MET n 3 107 ASN n 3 108 TRP n 3 109 ILE n 3 110 LYS n 3 111 ASP n 3 112 VAL n 3 113 VAL n 3 114 LEU n 3 115 ASP n 3 116 GLU n 3 117 GLU n 3 118 PHE n 3 119 MET n 3 120 LYS n 3 121 ARG n 3 122 LEU n 3 123 LEU n 3 124 ASN n 3 125 MET n 3 126 SER n 3 127 ASP n 3 128 GLU n 3 129 GLU n 3 130 ILE n 3 131 TYR n 3 132 ARG n 3 133 GLN n 3 134 ILE n 3 135 TYR n 3 136 THR n 3 137 ARG n 3 138 ILE n 3 139 SER n 3 140 LYS n 3 141 ALA n 3 142 PRO n 3 143 ASN n 3 144 LEU n 3 145 SER n 3 146 GLY n 3 147 ILE n 3 148 ASN n 3 149 PHE n 3 150 SER n 3 151 ARG n 3 152 GLU n 3 153 TYR n 3 154 VAL n 3 155 ARG n 3 156 HIS n 3 157 LEU n 3 158 ASN n 3 159 GLY n 3 160 SER n 3 161 GLY n 3 162 GLY n 3 163 SER n 3 164 GLY n 3 165 LEU n 3 166 ASN n 4 1 GLU n 4 2 VAL n 4 3 GLN n 4 4 LEU n 4 5 VAL n 4 6 GLU n 4 7 SER n 4 8 GLY n 4 9 GLY n 4 10 GLY n 4 11 LEU n 4 12 VAL n 4 13 LYS n 4 14 PRO n 4 15 GLY n 4 16 GLY n 4 17 SER n 4 18 LEU n 4 19 ARG n 4 20 LEU n 4 21 SER n 4 22 CYS n 4 23 SER n 4 24 ALA n 4 25 SER n 4 26 GLY n 4 27 PHE n 4 28 ASP n 4 29 PHE n 4 30 ASP n 4 31 ASN n 4 32 ALA n 4 33 TRP n 4 34 MET n 4 35 THR n 4 36 TRP n 4 37 VAL n 4 38 ARG n 4 39 GLN n 4 40 PRO n 4 41 PRO n 4 42 GLY n 4 43 LYS n 4 44 GLY n 4 45 LEU n 4 46 GLU n 4 47 TRP n 4 48 VAL n 4 49 GLY n 4 50 ARG n 4 51 ILE n 4 52 THR n 4 53 GLY n 4 54 PRO n 4 55 GLY n 4 56 GLU n 4 57 GLY n 4 58 TRP n 4 59 SER n 4 60 VAL n 4 61 ASP n 4 62 TYR n 4 63 ALA n 4 64 ALA n 4 65 PRO n 4 66 VAL n 4 67 GLU n 4 68 GLY n 4 69 ARG n 4 70 PHE n 4 71 THR n 4 72 ILE n 4 73 SER n 4 74 ARG n 4 75 LEU n 4 76 ASN n 4 77 SER n 4 78 ILE n 4 79 ASN n 4 80 PHE n 4 81 LEU n 4 82 TYR n 4 83 LEU n 4 84 GLU n 4 85 MET n 4 86 ASN n 4 87 ASN n 4 88 LEU n 4 89 ARG n 4 90 MET n 4 91 GLU n 4 92 ASP n 4 93 SER n 4 94 GLY n 4 95 LEU n 4 96 TYR n 4 97 PHE n 4 98 CYS n 4 99 ALA n 4 100 ARG n 4 101 THR n 4 102 GLY n 4 103 LYS n 4 104 TYR n 4 105 TYR n 4 106 ASP n 4 107 PHE n 4 108 TRP n 4 109 SER n 4 110 GLY n 4 111 TYR n 4 112 PRO n 4 113 PRO n 4 114 GLY n 4 115 GLU n 4 116 GLU n 4 117 TYR n 4 118 PHE n 4 119 GLN n 4 120 ASP n 4 121 TRP n 4 122 GLY n 4 123 ARG n 4 124 GLY n 4 125 THR n 4 126 LEU n 4 127 VAL n 4 128 THR n 4 129 VAL n 4 130 SER n 4 131 SER n 5 1 SER n 5 2 TYR n 5 3 GLU n 5 4 LEU n 5 5 THR n 5 6 GLN n 5 7 GLU n 5 8 THR n 5 9 GLY n 5 10 VAL n 5 11 SER n 5 12 VAL n 5 13 ALA n 5 14 LEU n 5 15 GLY n 5 16 ARG n 5 17 THR n 5 18 VAL n 5 19 THR n 5 20 ILE n 5 21 THR n 5 22 CYS n 5 23 ARG n 5 24 GLY n 5 25 ASP n 5 26 SER n 5 27 LEU n 5 28 ARG n 5 29 SER n 5 30 HIS n 5 31 TYR n 5 32 ALA n 5 33 SER n 5 34 TRP n 5 35 TYR n 5 36 GLN n 5 37 LYS n 5 38 LYS n 5 39 PRO n 5 40 GLY n 5 41 GLN n 5 42 ALA n 5 43 PRO n 5 44 ILE n 5 45 LEU n 5 46 LEU n 5 47 PHE n 5 48 TYR n 5 49 GLY n 5 50 LYS n 5 51 ASN n 5 52 ASN n 5 53 ARG n 5 54 PRO n 5 55 SER n 5 56 GLY n 5 57 VAL n 5 58 PRO n 5 59 ASP n 5 60 ARG n 5 61 PHE n 5 62 SER n 5 63 GLY n 5 64 SER n 5 65 ALA n 5 66 SER n 5 67 GLY n 5 68 ASN n 5 69 ARG n 5 70 ALA n 5 71 SER n 5 72 LEU n 5 73 THR n 5 74 ILE n 5 75 SER n 5 76 GLY n 5 77 ALA n 5 78 GLN n 5 79 ALA n 5 80 GLU n 5 81 ASP n 5 82 ASP n 5 83 ALA n 5 84 GLU n 5 85 TYR n 5 86 TYR n 5 87 CYS n 5 88 SER n 5 89 SER n 5 90 ARG n 5 91 ASP n 5 92 LYS n 5 93 SER n 5 94 GLY n 5 95 SER n 5 96 ARG n 5 97 LEU n 5 98 SER n 5 99 VAL n 5 100 PHE n 5 101 GLY n 5 102 GLY n 5 103 GLY n 5 104 THR n 5 105 LYS n 5 106 LEU n 5 107 THR n 5 108 VAL n 5 109 LEU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 119 ? ? ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 107 ? ? ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 166 ? ? ? ? ? ? ? ? ? 'synthetic construct' 32630 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample 'Biological sequence' 1 131 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 5 1 sample 'Biological sequence' 1 109 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 1 GLN GLN A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 MET 34 34 34 MET MET A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 TRP 38 38 38 TRP TRP A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 TRP 49 49 49 TRP TRP A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 TRP 54 54 54 TRP TRP A . n A 1 55 TRP 55 55 55 TRP TRP A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 TYR 96 96 96 TYR TYR A . n A 1 97 CYS 97 97 97 CYS CYS A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 TYR 104 104 104 TYR TYR A . n A 1 105 PHE 105 105 105 PHE PHE A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 ASP 107 107 107 ASP ASP A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 TRP 109 109 109 TRP TRP A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 SER 119 119 119 SER SER A . n B 2 1 ASP 1 1 1 ASP ASP B . n B 2 2 ILE 2 2 2 ILE ILE B . n B 2 3 GLN 3 3 3 GLN GLN B . n B 2 4 MET 4 4 4 MET MET B . n B 2 5 THR 5 5 5 THR THR B . n B 2 6 GLN 6 6 6 GLN GLN B . n B 2 7 SER 7 7 7 SER SER B . n B 2 8 PRO 8 8 8 PRO PRO B . n B 2 9 ALA 9 9 9 ALA ALA B . n B 2 10 SER 10 10 10 SER SER B . n B 2 11 LEU 11 11 11 LEU LEU B . n B 2 12 SER 12 12 12 SER SER B . n B 2 13 ALA 13 13 13 ALA ALA B . n B 2 14 SER 14 14 14 SER SER B . n B 2 15 VAL 15 15 15 VAL VAL B . n B 2 16 GLY 16 16 16 GLY GLY B . n B 2 17 GLU 17 17 17 GLU GLU B . n B 2 18 THR 18 18 18 THR THR B . n B 2 19 VAL 19 19 19 VAL VAL B . n B 2 20 THR 20 20 20 THR THR B . n B 2 21 ILE 21 21 21 ILE ILE B . n B 2 22 THR 22 22 22 THR THR B . n B 2 23 CYS 23 23 23 CYS CYS B . n B 2 24 ARG 24 24 24 ARG ARG B . n B 2 25 ALA 25 25 25 ALA ALA B . n B 2 26 SER 26 26 26 SER SER B . n B 2 27 GLY 27 27 27 GLY GLY B . n B 2 28 ASN 28 28 28 ASN ASN B . n B 2 29 ILE 29 29 29 ILE ILE B . n B 2 30 HIS 30 30 30 HIS HIS B . n B 2 31 ASN 31 31 31 ASN ASN B . n B 2 32 TYR 32 32 32 TYR TYR B . n B 2 33 LEU 33 33 33 LEU LEU B . n B 2 34 ALA 34 34 34 ALA ALA B . n B 2 35 TRP 35 35 35 TRP TRP B . n B 2 36 TYR 36 36 36 TYR TYR B . n B 2 37 GLN 37 37 37 GLN GLN B . n B 2 38 GLN 38 38 38 GLN GLN B . n B 2 39 LYS 39 39 39 LYS LYS B . n B 2 40 GLN 40 40 40 GLN GLN B . n B 2 41 GLY 41 41 41 GLY GLY B . n B 2 42 LYS 42 42 42 LYS LYS B . n B 2 43 SER 43 43 43 SER SER B . n B 2 44 PRO 44 44 44 PRO PRO B . n B 2 45 GLN 45 45 45 GLN GLN B . n B 2 46 LEU 46 46 46 LEU LEU B . n B 2 47 LEU 47 47 47 LEU LEU B . n B 2 48 VAL 48 48 48 VAL VAL B . n B 2 49 TYR 49 49 49 TYR TYR B . n B 2 50 ASN 50 50 50 ASN ASN B . n B 2 51 ALA 51 51 51 ALA ALA B . n B 2 52 LYS 52 52 52 LYS LYS B . n B 2 53 THR 53 53 53 THR THR B . n B 2 54 LEU 54 54 54 LEU LEU B . n B 2 55 ALA 55 55 55 ALA ALA B . n B 2 56 ASP 56 56 56 ASP ASP B . n B 2 57 GLY 57 57 57 GLY GLY B . n B 2 58 VAL 58 58 58 VAL VAL B . n B 2 59 PRO 59 59 59 PRO PRO B . n B 2 60 SER 60 60 60 SER SER B . n B 2 61 ARG 61 61 61 ARG ARG B . n B 2 62 PHE 62 62 62 PHE PHE B . n B 2 63 SER 63 63 63 SER SER B . n B 2 64 GLY 64 64 64 GLY GLY B . n B 2 65 SER 65 65 65 SER SER B . n B 2 66 GLY 66 66 66 GLY GLY B . n B 2 67 SER 67 67 67 SER SER B . n B 2 68 GLY 68 68 68 GLY GLY B . n B 2 69 THR 69 69 69 THR THR B . n B 2 70 GLN 70 70 70 GLN GLN B . n B 2 71 TYR 71 71 71 TYR TYR B . n B 2 72 SER 72 72 72 SER SER B . n B 2 73 LEU 73 73 73 LEU LEU B . n B 2 74 LYS 74 74 74 LYS LYS B . n B 2 75 ILE 75 75 75 ILE ILE B . n B 2 76 ASN 76 76 76 ASN ASN B . n B 2 77 SER 77 77 77 SER SER B . n B 2 78 LEU 78 78 78 LEU LEU B . n B 2 79 GLN 79 79 79 GLN GLN B . n B 2 80 PRO 80 80 80 PRO PRO B . n B 2 81 GLU 81 81 81 GLU GLU B . n B 2 82 ASP 82 82 82 ASP ASP B . n B 2 83 PHE 83 83 83 PHE PHE B . n B 2 84 GLY 84 84 84 GLY GLY B . n B 2 85 SER 85 85 85 SER SER B . n B 2 86 TYR 86 86 86 TYR TYR B . n B 2 87 TYR 87 87 87 TYR TYR B . n B 2 88 CYS 88 88 88 CYS CYS B . n B 2 89 GLN 89 89 89 GLN GLN B . n B 2 90 HIS 90 90 90 HIS HIS B . n B 2 91 PHE 91 91 91 PHE PHE B . n B 2 92 TRP 92 92 92 TRP TRP B . n B 2 93 SER 93 93 93 SER SER B . n B 2 94 ALA 94 94 94 ALA ALA B . n B 2 95 PRO 95 95 95 PRO PRO B . n B 2 96 TYR 96 96 96 TYR TYR B . n B 2 97 THR 97 97 97 THR THR B . n B 2 98 PHE 98 98 98 PHE PHE B . n B 2 99 GLY 99 99 99 GLY GLY B . n B 2 100 GLY 100 100 100 GLY GLY B . n B 2 101 GLY 101 101 101 GLY GLY B . n B 2 102 THR 102 102 102 THR THR B . n B 2 103 ASN 103 103 103 ASN ASN B . n B 2 104 LEU 104 104 104 LEU LEU B . n B 2 105 GLU 105 105 105 GLU GLU B . n B 2 106 ILE 106 106 106 ILE ILE B . n B 2 107 LYS 107 107 107 LYS LYS B . n C 3 1 GLU 1 0 ? ? ? C . n C 3 2 THR 2 1 ? ? ? C . n C 3 3 GLY 3 2 ? ? ? C . n C 3 4 ASN 4 3 ? ? ? C . n C 3 5 VAL 5 4 ? ? ? C . n C 3 6 THR 6 5 ? ? ? C . n C 3 7 GLN 7 6 ? ? ? C . n C 3 8 GLU 8 7 7 GLU GLU C . n C 3 9 ASP 9 8 8 ASP ASP C . n C 3 10 ILE 10 9 9 ILE ILE C . n C 3 11 ILE 11 10 10 ILE ILE C . n C 3 12 ARG 12 11 11 ARG ARG C . n C 3 13 ALA 13 12 12 ALA ALA C . n C 3 14 LEU 14 13 13 LEU LEU C . n C 3 15 ALA 15 14 14 ALA ALA C . n C 3 16 SER 16 15 15 SER SER C . n C 3 17 PRO 17 16 16 PRO PRO C . n C 3 18 LEU 18 17 17 LEU LEU C . n C 3 19 ILE 19 18 18 ILE ILE C . n C 3 20 LYS 20 19 19 LYS LYS C . n C 3 21 ASP 21 20 20 ASP ASP C . n C 3 22 GLY 22 21 21 GLY GLY C . n C 3 23 MET 23 22 22 MET MET C . n C 3 24 VAL 24 23 23 VAL VAL C . n C 3 25 ASP 25 24 24 ASP ASP C . n C 3 26 GLU 26 25 25 GLU GLU C . n C 3 27 ASP 27 26 26 ASP ASP C . n C 3 28 PHE 28 27 27 PHE PHE C . n C 3 29 ALA 29 28 28 ALA ALA C . n C 3 30 GLU 30 29 29 GLU GLU C . n C 3 31 LYS 31 30 30 LYS LYS C . n C 3 32 VAL 32 31 31 VAL VAL C . n C 3 33 ILE 33 32 32 ILE ILE C . n C 3 34 GLU 34 33 33 GLU GLU C . n C 3 35 ASN 35 34 34 ASN ASN C . n C 3 36 GLU 36 35 35 GLU GLU C . n C 3 37 SER 37 36 36 SER SER C . n C 3 38 ARG 38 37 37 ARG ARG C . n C 3 39 TYR 39 38 38 TYR TYR C . n C 3 40 PRO 40 39 39 PRO PRO C . n C 3 41 SER 41 40 40 SER SER C . n C 3 42 GLY 42 41 41 GLY GLY C . n C 3 43 LEU 43 42 42 LEU LEU C . n C 3 44 GLN 44 43 43 GLN GLN C . n C 3 45 ALA 45 44 44 ALA ALA C . n C 3 46 LYS 46 45 45 LYS LYS C . n C 3 47 GLY 47 46 46 GLY GLY C . n C 3 48 VAL 48 47 47 VAL VAL C . n C 3 49 GLY 49 48 48 GLY GLY C . n C 3 50 PHE 50 49 49 PHE PHE C . n C 3 51 ALA 51 50 50 ALA ALA C . n C 3 52 ILE 52 51 51 ILE ILE C . n C 3 53 PRO 53 52 52 PRO PRO C . n C 3 54 HIS 54 53 53 HIS HIS C . n C 3 55 VAL 55 54 54 VAL VAL C . n C 3 56 LEU 56 55 55 LEU LEU C . n C 3 57 GLY 57 56 56 GLY GLY C . n C 3 58 ASP 58 57 57 ASP ASP C . n C 3 59 TYR 59 58 58 TYR TYR C . n C 3 60 VAL 60 59 59 VAL VAL C . n C 3 61 ARG 61 60 60 ARG ARG C . n C 3 62 ASP 62 61 61 ASP ASP C . n C 3 63 ASN 63 62 62 ASN ASN C . n C 3 64 ALA 64 63 63 ALA ALA C . n C 3 65 ILE 65 64 64 ILE ILE C . n C 3 66 SER 66 65 65 SER SER C . n C 3 67 VAL 67 66 66 VAL VAL C . n C 3 68 GLY 68 67 67 GLY GLY C . n C 3 69 ILE 69 68 68 ILE ILE C . n C 3 70 LEU 70 69 69 LEU LEU C . n C 3 71 ASP 71 70 70 ASP ASP C . n C 3 72 LYS 72 71 71 LYS LYS C . n C 3 73 PRO 73 72 72 PRO PRO C . n C 3 74 VAL 74 73 73 VAL VAL C . n C 3 75 ASN 75 74 74 ASN ASN C . n C 3 76 PHE 76 75 75 PHE PHE C . n C 3 77 SER 77 76 76 SER SER C . n C 3 78 GLU 78 77 77 GLU GLU C . n C 3 79 TRP 79 78 78 TRP TRP C . n C 3 80 TYR 80 79 79 TYR TYR C . n C 3 81 GLN 81 80 80 GLN GLN C . n C 3 82 SER 82 81 81 SER SER C . n C 3 83 PRO 83 82 82 PRO PRO C . n C 3 84 ASP 84 83 83 ASP ASP C . n C 3 85 PRO 85 84 84 PRO PRO C . n C 3 86 VAL 86 85 85 VAL VAL C . n C 3 87 PRO 87 86 86 PRO PRO C . n C 3 88 VAL 88 87 87 VAL VAL C . n C 3 89 ARG 89 88 88 ARG ARG C . n C 3 90 VAL 90 89 89 VAL VAL C . n C 3 91 VAL 91 90 90 VAL VAL C . n C 3 92 PHE 92 91 91 PHE PHE C . n C 3 93 MET 93 92 92 MET MET C . n C 3 94 LEU 94 93 93 LEU LEU C . n C 3 95 ALA 95 94 94 ALA ALA C . n C 3 96 ILE 96 95 95 ILE ILE C . n C 3 97 ARG 97 96 96 ARG ARG C . n C 3 98 THR 98 97 97 THR THR C . n C 3 99 TRP 99 98 98 TRP TRP C . n C 3 100 ASP 100 99 99 ASP ASP C . n C 3 101 ASP 101 100 100 ASP ASP C . n C 3 102 ILE 102 101 101 ILE ILE C . n C 3 103 THR 103 102 102 THR THR C . n C 3 104 ASN 104 103 103 ASN ASN C . n C 3 105 VAL 105 104 104 VAL VAL C . n C 3 106 MET 106 105 105 MET MET C . n C 3 107 ASN 107 106 106 ASN ASN C . n C 3 108 TRP 108 107 107 TRP TRP C . n C 3 109 ILE 109 108 108 ILE ILE C . n C 3 110 LYS 110 109 109 LYS LYS C . n C 3 111 ASP 111 110 110 ASP ASP C . n C 3 112 VAL 112 111 111 VAL VAL C . n C 3 113 VAL 113 112 112 VAL VAL C . n C 3 114 LEU 114 113 113 LEU LEU C . n C 3 115 ASP 115 114 114 ASP ASP C . n C 3 116 GLU 116 115 115 GLU GLU C . n C 3 117 GLU 117 116 116 GLU GLU C . n C 3 118 PHE 118 117 117 PHE PHE C . n C 3 119 MET 119 118 118 MET MET C . n C 3 120 LYS 120 119 119 LYS LYS C . n C 3 121 ARG 121 120 120 ARG ARG C . n C 3 122 LEU 122 121 121 LEU LEU C . n C 3 123 LEU 123 122 122 LEU LEU C . n C 3 124 ASN 124 123 123 ASN ASN C . n C 3 125 MET 125 124 124 MET MET C . n C 3 126 SER 126 125 125 SER SER C . n C 3 127 ASP 127 126 126 ASP ASP C . n C 3 128 GLU 128 127 127 GLU GLU C . n C 3 129 GLU 129 128 128 GLU GLU C . n C 3 130 ILE 130 129 129 ILE ILE C . n C 3 131 TYR 131 130 130 TYR TYR C . n C 3 132 ARG 132 131 131 ARG ARG C . n C 3 133 GLN 133 132 132 GLN GLN C . n C 3 134 ILE 134 133 133 ILE ILE C . n C 3 135 TYR 135 134 134 TYR TYR C . n C 3 136 THR 136 135 135 THR THR C . n C 3 137 ARG 137 136 136 ARG ARG C . n C 3 138 ILE 138 137 137 ILE ILE C . n C 3 139 SER 139 138 138 SER SER C . n C 3 140 LYS 140 139 139 LYS LYS C . n C 3 141 ALA 141 140 140 ALA ALA C . n C 3 142 PRO 142 141 141 PRO PRO C . n C 3 143 ASN 143 142 142 ASN ASN C . n C 3 144 LEU 144 143 143 LEU LEU C . n C 3 145 SER 145 144 144 SER SER C . n C 3 146 GLY 146 145 145 GLY GLY C . n C 3 147 ILE 147 146 146 ILE ILE C . n C 3 148 ASN 148 147 147 ASN ASN C . n C 3 149 PHE 149 148 148 PHE PHE C . n C 3 150 SER 150 149 149 SER SER C . n C 3 151 ARG 151 150 150 ARG ARG C . n C 3 152 GLU 152 151 151 GLU GLU C . n C 3 153 TYR 153 152 152 TYR TYR C . n C 3 154 VAL 154 153 153 VAL VAL C . n C 3 155 ARG 155 154 154 ARG ARG C . n C 3 156 HIS 156 155 155 HIS HIS C . n C 3 157 LEU 157 156 156 LEU LEU C . n C 3 158 ASN 158 157 157 ASN ASN C . n C 3 159 GLY 159 158 158 GLY GLY C . n C 3 160 SER 160 159 ? ? ? C . n C 3 161 GLY 161 160 ? ? ? C . n C 3 162 GLY 162 161 ? ? ? C . n C 3 163 SER 163 162 ? ? ? C . n C 3 164 GLY 164 163 ? ? ? C . n C 3 165 LEU 165 164 ? ? ? C . n C 3 166 ASN 166 165 ? ? ? C . n D 4 1 GLU 1 1 1 GLU GLU H . n D 4 2 VAL 2 2 2 VAL VAL H . n D 4 3 GLN 3 3 3 GLN GLN H . n D 4 4 LEU 4 4 4 LEU LEU H . n D 4 5 VAL 5 5 5 VAL VAL H . n D 4 6 GLU 6 6 6 GLU GLU H . n D 4 7 SER 7 7 7 SER SER H . n D 4 8 GLY 8 8 8 GLY GLY H . n D 4 9 GLY 9 9 9 GLY GLY H . n D 4 10 GLY 10 10 10 GLY GLY H . n D 4 11 LEU 11 11 11 LEU LEU H . n D 4 12 VAL 12 12 12 VAL VAL H . n D 4 13 LYS 13 13 13 LYS LYS H . n D 4 14 PRO 14 14 14 PRO PRO H . n D 4 15 GLY 15 15 15 GLY GLY H . n D 4 16 GLY 16 16 16 GLY GLY H . n D 4 17 SER 17 17 17 SER SER H . n D 4 18 LEU 18 18 18 LEU LEU H . n D 4 19 ARG 19 19 19 ARG ARG H . n D 4 20 LEU 20 20 20 LEU LEU H . n D 4 21 SER 21 21 21 SER SER H . n D 4 22 CYS 22 22 22 CYS CYS H . n D 4 23 SER 23 23 23 SER SER H . n D 4 24 ALA 24 24 24 ALA ALA H . n D 4 25 SER 25 25 25 SER SER H . n D 4 26 GLY 26 26 26 GLY GLY H . n D 4 27 PHE 27 27 27 PHE PHE H . n D 4 28 ASP 28 28 28 ASP ASP H . n D 4 29 PHE 29 29 29 PHE PHE H . n D 4 30 ASP 30 30 30 ASP ASP H . n D 4 31 ASN 31 31 31 ASN ASN H . n D 4 32 ALA 32 32 32 ALA ALA H . n D 4 33 TRP 33 33 33 TRP TRP H . n D 4 34 MET 34 34 34 MET MET H . n D 4 35 THR 35 35 35 THR THR H . n D 4 36 TRP 36 36 36 TRP TRP H . n D 4 37 VAL 37 37 37 VAL VAL H . n D 4 38 ARG 38 38 38 ARG ARG H . n D 4 39 GLN 39 39 39 GLN GLN H . n D 4 40 PRO 40 40 40 PRO PRO H . n D 4 41 PRO 41 41 41 PRO PRO H . n D 4 42 GLY 42 42 42 GLY GLY H . n D 4 43 LYS 43 43 43 LYS LYS H . n D 4 44 GLY 44 44 44 GLY GLY H . n D 4 45 LEU 45 45 45 LEU LEU H . n D 4 46 GLU 46 46 46 GLU GLU H . n D 4 47 TRP 47 47 47 TRP TRP H . n D 4 48 VAL 48 48 48 VAL VAL H . n D 4 49 GLY 49 49 49 GLY GLY H . n D 4 50 ARG 50 50 50 ARG ARG H . n D 4 51 ILE 51 51 51 ILE ILE H . n D 4 52 THR 52 52 52 THR THR H . n D 4 53 GLY 53 53 53 GLY GLY H . n D 4 54 PRO 54 54 54 PRO PRO H . n D 4 55 GLY 55 55 55 GLY GLY H . n D 4 56 GLU 56 56 56 GLU GLU H . n D 4 57 GLY 57 57 57 GLY GLY H . n D 4 58 TRP 58 58 58 TRP TRP H . n D 4 59 SER 59 59 59 SER SER H . n D 4 60 VAL 60 60 60 VAL VAL H . n D 4 61 ASP 61 61 61 ASP ASP H . n D 4 62 TYR 62 62 62 TYR TYR H . n D 4 63 ALA 63 63 63 ALA ALA H . n D 4 64 ALA 64 64 64 ALA ALA H . n D 4 65 PRO 65 65 65 PRO PRO H . n D 4 66 VAL 66 66 66 VAL VAL H . n D 4 67 GLU 67 67 67 GLU GLU H . n D 4 68 GLY 68 68 68 GLY GLY H . n D 4 69 ARG 69 69 69 ARG ARG H . n D 4 70 PHE 70 70 70 PHE PHE H . n D 4 71 THR 71 71 71 THR THR H . n D 4 72 ILE 72 72 72 ILE ILE H . n D 4 73 SER 73 73 73 SER SER H . n D 4 74 ARG 74 74 74 ARG ARG H . n D 4 75 LEU 75 75 75 LEU LEU H . n D 4 76 ASN 76 76 76 ASN ASN H . n D 4 77 SER 77 77 77 SER SER H . n D 4 78 ILE 78 78 78 ILE ILE H . n D 4 79 ASN 79 79 79 ASN ASN H . n D 4 80 PHE 80 80 80 PHE PHE H . n D 4 81 LEU 81 81 81 LEU LEU H . n D 4 82 TYR 82 82 82 TYR TYR H . n D 4 83 LEU 83 83 83 LEU LEU H . n D 4 84 GLU 84 84 84 GLU GLU H . n D 4 85 MET 85 85 85 MET MET H . n D 4 86 ASN 86 86 86 ASN ASN H . n D 4 87 ASN 87 87 87 ASN ASN H . n D 4 88 LEU 88 88 88 LEU LEU H . n D 4 89 ARG 89 89 89 ARG ARG H . n D 4 90 MET 90 90 90 MET MET H . n D 4 91 GLU 91 91 91 GLU GLU H . n D 4 92 ASP 92 92 92 ASP ASP H . n D 4 93 SER 93 93 93 SER SER H . n D 4 94 GLY 94 94 94 GLY GLY H . n D 4 95 LEU 95 95 95 LEU LEU H . n D 4 96 TYR 96 96 96 TYR TYR H . n D 4 97 PHE 97 97 97 PHE PHE H . n D 4 98 CYS 98 98 98 CYS CYS H . n D 4 99 ALA 99 99 99 ALA ALA H . n D 4 100 ARG 100 100 100 ARG ARG H . n D 4 101 THR 101 101 101 THR THR H . n D 4 102 GLY 102 102 102 GLY GLY H . n D 4 103 LYS 103 103 103 LYS LYS H . n D 4 104 TYR 104 104 104 TYR TYR H . n D 4 105 TYR 105 105 105 TYR TYR H . n D 4 106 ASP 106 106 106 ASP ASP H . n D 4 107 PHE 107 107 107 PHE PHE H . n D 4 108 TRP 108 108 108 TRP TRP H . n D 4 109 SER 109 109 109 SER SER H . n D 4 110 GLY 110 110 110 GLY GLY H . n D 4 111 TYR 111 111 111 TYR TYR H . n D 4 112 PRO 112 112 112 PRO PRO H . n D 4 113 PRO 113 113 113 PRO PRO H . n D 4 114 GLY 114 114 114 GLY GLY H . n D 4 115 GLU 115 115 115 GLU GLU H . n D 4 116 GLU 116 116 116 GLU GLU H . n D 4 117 TYR 117 117 117 TYR TYR H . n D 4 118 PHE 118 118 118 PHE PHE H . n D 4 119 GLN 119 119 119 GLN GLN H . n D 4 120 ASP 120 120 120 ASP ASP H . n D 4 121 TRP 121 121 121 TRP TRP H . n D 4 122 GLY 122 122 122 GLY GLY H . n D 4 123 ARG 123 123 123 ARG ARG H . n D 4 124 GLY 124 124 124 GLY GLY H . n D 4 125 THR 125 125 125 THR THR H . n D 4 126 LEU 126 126 126 LEU LEU H . n D 4 127 VAL 127 127 127 VAL VAL H . n D 4 128 THR 128 128 128 THR THR H . n D 4 129 VAL 129 129 129 VAL VAL H . n D 4 130 SER 130 130 130 SER SER H . n D 4 131 SER 131 131 ? ? ? H . n E 5 1 SER 1 0 ? ? ? L . n E 5 2 TYR 2 1 1 TYR TYR L . n E 5 3 GLU 3 2 2 GLU GLU L . n E 5 4 LEU 4 3 3 LEU LEU L . n E 5 5 THR 5 4 4 THR THR L . n E 5 6 GLN 6 5 5 GLN GLN L . n E 5 7 GLU 7 6 6 GLU GLU L . n E 5 8 THR 8 7 7 THR THR L . n E 5 9 GLY 9 8 8 GLY GLY L . n E 5 10 VAL 10 9 9 VAL VAL L . n E 5 11 SER 11 10 10 SER SER L . n E 5 12 VAL 12 11 11 VAL VAL L . n E 5 13 ALA 13 12 12 ALA ALA L . n E 5 14 LEU 14 13 13 LEU LEU L . n E 5 15 GLY 15 14 14 GLY GLY L . n E 5 16 ARG 16 15 15 ARG ARG L . n E 5 17 THR 17 16 16 THR THR L . n E 5 18 VAL 18 17 17 VAL VAL L . n E 5 19 THR 19 18 18 THR THR L . n E 5 20 ILE 20 19 19 ILE ILE L . n E 5 21 THR 21 20 20 THR THR L . n E 5 22 CYS 22 21 21 CYS CYS L . n E 5 23 ARG 23 22 22 ARG ARG L . n E 5 24 GLY 24 23 23 GLY GLY L . n E 5 25 ASP 25 24 24 ASP ASP L . n E 5 26 SER 26 25 25 SER SER L . n E 5 27 LEU 27 26 26 LEU LEU L . n E 5 28 ARG 28 27 27 ARG ARG L . n E 5 29 SER 29 28 28 SER SER L . n E 5 30 HIS 30 29 29 HIS HIS L . n E 5 31 TYR 31 30 30 TYR TYR L . n E 5 32 ALA 32 31 31 ALA ALA L . n E 5 33 SER 33 32 32 SER SER L . n E 5 34 TRP 34 33 33 TRP TRP L . n E 5 35 TYR 35 34 34 TYR TYR L . n E 5 36 GLN 36 35 35 GLN GLN L . n E 5 37 LYS 37 36 36 LYS LYS L . n E 5 38 LYS 38 37 37 LYS LYS L . n E 5 39 PRO 39 38 38 PRO PRO L . n E 5 40 GLY 40 39 39 GLY GLY L . n E 5 41 GLN 41 40 40 GLN GLN L . n E 5 42 ALA 42 41 41 ALA ALA L . n E 5 43 PRO 43 42 42 PRO PRO L . n E 5 44 ILE 44 43 43 ILE ILE L . n E 5 45 LEU 45 44 44 LEU LEU L . n E 5 46 LEU 46 45 45 LEU LEU L . n E 5 47 PHE 47 46 46 PHE PHE L . n E 5 48 TYR 48 47 47 TYR TYR L . n E 5 49 GLY 49 48 48 GLY GLY L . n E 5 50 LYS 50 49 49 LYS LYS L . n E 5 51 ASN 51 50 50 ASN ASN L . n E 5 52 ASN 52 51 51 ASN ASN L . n E 5 53 ARG 53 52 52 ARG ARG L . n E 5 54 PRO 54 53 53 PRO PRO L . n E 5 55 SER 55 54 54 SER SER L . n E 5 56 GLY 56 55 55 GLY GLY L . n E 5 57 VAL 57 56 56 VAL VAL L . n E 5 58 PRO 58 57 57 PRO PRO L . n E 5 59 ASP 59 58 58 ASP ASP L . n E 5 60 ARG 60 59 59 ARG ARG L . n E 5 61 PHE 61 60 60 PHE PHE L . n E 5 62 SER 62 61 61 SER SER L . n E 5 63 GLY 63 62 62 GLY GLY L . n E 5 64 SER 64 63 63 SER SER L . n E 5 65 ALA 65 64 64 ALA ALA L . n E 5 66 SER 66 65 65 SER SER L . n E 5 67 GLY 67 66 66 GLY GLY L . n E 5 68 ASN 68 67 67 ASN ASN L . n E 5 69 ARG 69 68 68 ARG ARG L . n E 5 70 ALA 70 69 69 ALA ALA L . n E 5 71 SER 71 70 70 SER SER L . n E 5 72 LEU 72 71 71 LEU LEU L . n E 5 73 THR 73 72 72 THR THR L . n E 5 74 ILE 74 73 73 ILE ILE L . n E 5 75 SER 75 74 74 SER SER L . n E 5 76 GLY 76 75 75 GLY GLY L . n E 5 77 ALA 77 76 76 ALA ALA L . n E 5 78 GLN 78 77 77 GLN GLN L . n E 5 79 ALA 79 78 78 ALA ALA L . n E 5 80 GLU 80 79 79 GLU GLU L . n E 5 81 ASP 81 80 80 ASP ASP L . n E 5 82 ASP 82 81 81 ASP ASP L . n E 5 83 ALA 83 82 82 ALA ALA L . n E 5 84 GLU 84 83 83 GLU GLU L . n E 5 85 TYR 85 84 84 TYR TYR L . n E 5 86 TYR 86 85 85 TYR TYR L . n E 5 87 CYS 87 86 86 CYS CYS L . n E 5 88 SER 88 87 87 SER SER L . n E 5 89 SER 89 88 88 SER SER L . n E 5 90 ARG 90 89 89 ARG ARG L . n E 5 91 ASP 91 90 90 ASP ASP L . n E 5 92 LYS 92 91 91 LYS LYS L . n E 5 93 SER 93 92 92 SER SER L . n E 5 94 GLY 94 93 93 GLY GLY L . n E 5 95 SER 95 94 94 SER SER L . n E 5 96 ARG 96 95 95 ARG ARG L . n E 5 97 LEU 97 96 96 LEU LEU L . n E 5 98 SER 98 97 97 SER SER L . n E 5 99 VAL 99 98 98 VAL VAL L . n E 5 100 PHE 100 99 99 PHE PHE L . n E 5 101 GLY 101 100 100 GLY GLY L . n E 5 102 GLY 102 101 101 GLY GLY L . n E 5 103 GLY 103 102 102 GLY GLY L . n E 5 104 THR 104 103 103 THR THR L . n E 5 105 LYS 105 104 104 LYS LYS L . n E 5 106 LEU 106 105 105 LEU LEU L . n E 5 107 THR 107 106 106 THR THR L . n E 5 108 VAL 108 107 107 VAL VAL L . n E 5 109 LEU 109 108 108 LEU LEU L . n # _pdbx_nonpoly_scheme.asym_id F _pdbx_nonpoly_scheme.entity_id 6 _pdbx_nonpoly_scheme.mon_id NAG _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 201 _pdbx_nonpoly_scheme.auth_seq_num 159 _pdbx_nonpoly_scheme.pdb_mon_id NAG _pdbx_nonpoly_scheme.auth_mon_id NAG _pdbx_nonpoly_scheme.pdb_strand_id C _pdbx_nonpoly_scheme.pdb_ins_code . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9PV4 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9PV4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9PV4 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9PV4 _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 4 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _struct.entry_id 9PV4 _struct.title 'MPER-GT12 immunogen in complex with human Fab 10E8 and mouse Fab W6-10' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9PV4 _struct_keywords.text ;HIV, Germline targeting, MPER, 10E8, broadly neutralizing antibody, vaccine design, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM complex ; _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9PV4 9PV4 ? 1 ? 1 2 PDB 9PV4 9PV4 ? 2 ? 1 3 PDB 9PV4 9PV4 ? 3 ? 1 4 PDB 9PV4 9PV4 ? 4 ? 1 5 PDB 9PV4 9PV4 ? 5 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9PV4 A 1 ? 119 ? 9PV4 1 ? 119 ? 1 119 2 2 9PV4 B 1 ? 107 ? 9PV4 1 ? 107 ? 1 107 3 3 9PV4 C 1 ? 166 ? 9PV4 0 ? 165 ? 0 165 4 4 9PV4 H 1 ? 131 ? 9PV4 1 ? 131 ? 1 131 5 5 9PV4 L 1 ? 109 ? 9PV4 0 ? 108 ? 0 108 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LEU A 65 ? SER A 67 ? LEU A 65 SER A 67 5 ? 3 HELX_P HELX_P2 AA2 ASP A 88 ? THR A 92 ? ASP A 88 THR A 92 5 ? 5 HELX_P HELX_P3 AA3 GLN B 79 ? PHE B 83 ? GLN B 79 PHE B 83 5 ? 5 HELX_P HELX_P4 AA4 ALA C 15 ? ASP C 21 ? ALA C 14 ASP C 20 1 ? 7 HELX_P HELX_P5 AA5 ASP C 27 ? TYR C 39 ? ASP C 26 TYR C 38 1 ? 13 HELX_P HELX_P6 AA6 THR C 98 ? LEU C 114 ? THR C 97 LEU C 113 1 ? 17 HELX_P HELX_P7 AA7 ASP C 115 ? LEU C 123 ? ASP C 114 LEU C 122 1 ? 9 HELX_P HELX_P8 AA8 SER C 126 ? ALA C 141 ? SER C 125 ALA C 140 1 ? 16 HELX_P HELX_P9 AA9 SER C 150 ? GLU C 152 ? SER C 149 GLU C 151 5 ? 3 HELX_P HELX_P10 AB1 ALA D 64 ? GLU D 67 ? ALA H 64 GLU H 67 5 ? 4 HELX_P HELX_P11 AB2 ASN D 76 ? ILE D 78 ? ASN H 76 ILE H 78 5 ? 3 HELX_P HELX_P12 AB3 ARG D 89 ? SER D 93 ? ARG H 89 SER H 93 5 ? 5 HELX_P HELX_P13 AB4 ASP E 25 ? SER E 29 ? ASP L 24 SER L 28 5 ? 5 HELX_P HELX_P14 AB5 GLN E 78 ? ASP E 82 ? GLN L 77 ASP L 81 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 22 A CYS 97 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf2 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 88 SG ? ? B CYS 23 B CYS 88 1_555 ? ? ? ? ? ? ? 2.024 ? ? covale1 covale one ? C ASN 75 ND2 ? ? ? 1_555 F NAG . C1 ? ? C ASN 74 C NAG 201 1_555 ? ? ? ? ? ? ? 1.520 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG F . ? ASN C 75 ? NAG C 201 ? 1_555 ASN C 74 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 CYS A 22 ? CYS A 97 ? CYS A 22 ? 1_555 CYS A 97 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 23 ? CYS B 88 ? CYS B 23 ? 1_555 CYS B 88 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 7 B . ? SER 7 B PRO 8 B ? PRO 8 B 1 -1.66 2 ALA 94 B . ? ALA 94 B PRO 95 B ? PRO 95 B 1 4.85 3 PRO 112 D . ? PRO 112 H PRO 113 D ? PRO 113 H 1 -7.74 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? AA4 ? 6 ? AA5 ? 4 ? AA6 ? 4 ? AA7 ? 6 ? AA8 ? 4 ? AA9 ? 4 ? AB1 ? 5 ? AB2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA4 5 6 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA5 3 4 ? parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA7 4 5 ? anti-parallel AA7 5 6 ? anti-parallel AA8 1 2 ? parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AB1 1 2 ? parallel AB1 2 3 ? anti-parallel AB1 3 4 ? anti-parallel AB1 4 5 ? anti-parallel AB2 1 2 ? parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 5 ? SER A 7 ? LYS A 5 SER A 7 AA1 2 LEU A 18 ? SER A 23 ? LEU A 18 SER A 23 AA1 3 GLN A 79 ? ILE A 84 ? GLN A 79 ILE A 84 AA1 4 LEU A 69 ? ASP A 74 ? LEU A 69 ASP A 74 AA2 1 ILE A 11 ? LEU A 12 ? ILE A 11 LEU A 12 AA2 2 THR A 113 ? VAL A 117 ? THR A 113 VAL A 117 AA2 3 ALA A 93 ? ILE A 100 ? ALA A 93 ILE A 100 AA2 4 GLY A 35 ? GLN A 41 ? GLY A 35 GLN A 41 AA2 5 GLU A 48 ? TRP A 54 ? GLU A 48 TRP A 54 AA2 6 LYS A 59 ? TYR A 61 ? LYS A 59 TYR A 61 AA3 1 MET B 4 ? SER B 7 ? MET B 4 SER B 7 AA3 2 VAL B 19 ? ALA B 25 ? VAL B 19 ALA B 25 AA3 3 GLN B 70 ? ILE B 75 ? GLN B 70 ILE B 75 AA3 4 PHE B 62 ? SER B 67 ? PHE B 62 SER B 67 AA4 1 SER B 10 ? ALA B 13 ? SER B 10 ALA B 13 AA4 2 THR B 102 ? ILE B 106 ? THR B 102 ILE B 106 AA4 3 SER B 85 ? HIS B 90 ? SER B 85 HIS B 90 AA4 4 LEU B 33 ? GLN B 38 ? LEU B 33 GLN B 38 AA4 5 GLN B 45 ? TYR B 49 ? GLN B 45 TYR B 49 AA4 6 THR B 53 ? LEU B 54 ? THR B 53 LEU B 54 AA5 1 GLY C 49 ? ALA C 51 ? GLY C 48 ALA C 50 AA5 2 SER C 82 ? ALA C 95 ? SER C 81 ALA C 94 AA5 3 ALA C 64 ? GLU C 78 ? ALA C 63 GLU C 77 AA5 4 VAL C 154 ? LEU C 157 ? VAL C 153 LEU C 156 AA6 1 GLN D 3 ? SER D 7 ? GLN H 3 SER H 7 AA6 2 LEU D 18 ? SER D 25 ? LEU H 18 SER H 25 AA6 3 PHE D 80 ? MET D 85 ? PHE H 80 MET H 85 AA6 4 PHE D 70 ? LEU D 75 ? PHE H 70 LEU H 75 AA7 1 LEU D 11 ? VAL D 12 ? LEU H 11 VAL H 12 AA7 2 THR D 125 ? VAL D 129 ? THR H 125 VAL H 129 AA7 3 GLY D 94 ? TYR D 104 ? GLY H 94 TYR H 104 AA7 4 TRP D 33 ? GLN D 39 ? TRP H 33 GLN H 39 AA7 5 GLU D 46 ? ILE D 51 ? GLU H 46 ILE H 51 AA7 6 VAL D 60 ? TYR D 62 ? VAL H 60 TYR H 62 AA8 1 LEU D 11 ? VAL D 12 ? LEU H 11 VAL H 12 AA8 2 THR D 125 ? VAL D 129 ? THR H 125 VAL H 129 AA8 3 GLY D 94 ? TYR D 104 ? GLY H 94 TYR H 104 AA8 4 GLU D 115 ? TRP D 121 ? GLU H 115 TRP H 121 AA9 1 THR E 5 ? GLN E 6 ? THR L 4 GLN L 5 AA9 2 VAL E 18 ? ARG E 23 ? VAL L 17 ARG L 22 AA9 3 ARG E 69 ? ILE E 74 ? ARG L 68 ILE L 73 AA9 4 GLY E 63 ? SER E 66 ? GLY L 62 SER L 65 AB1 1 GLY E 9 ? VAL E 12 ? GLY L 8 VAL L 11 AB1 2 THR E 104 ? VAL E 108 ? THR L 103 VAL L 107 AB1 3 ALA E 83 ? ARG E 90 ? ALA L 82 ARG L 89 AB1 4 SER E 33 ? LYS E 37 ? SER L 32 LYS L 36 AB1 5 ILE E 44 ? PHE E 47 ? ILE L 43 PHE L 46 AB2 1 GLY E 9 ? VAL E 12 ? GLY L 8 VAL L 11 AB2 2 THR E 104 ? VAL E 108 ? THR L 103 VAL L 107 AB2 3 ALA E 83 ? ARG E 90 ? ALA L 82 ARG L 89 AB2 4 SER E 98 ? PHE E 100 ? SER L 97 PHE L 99 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 5 ? N LYS A 5 O SER A 23 ? O SER A 23 AA1 2 3 N LEU A 18 ? N LEU A 18 O ILE A 84 ? O ILE A 84 AA1 3 4 O GLN A 79 ? O GLN A 79 N ASP A 74 ? N ASP A 74 AA2 1 2 N LEU A 12 ? N LEU A 12 O THR A 116 ? O THR A 116 AA2 2 3 O THR A 113 ? O THR A 113 N TYR A 95 ? N TYR A 95 AA2 3 4 O ILE A 100 ? O ILE A 100 N GLY A 35 ? N GLY A 35 AA2 4 5 N ARG A 40 ? N ARG A 40 O GLU A 48 ? O GLU A 48 AA2 5 6 N HIS A 52 ? N HIS A 52 O PHE A 60 ? O PHE A 60 AA3 1 2 N THR B 5 ? N THR B 5 O ARG B 24 ? O ARG B 24 AA3 2 3 N CYS B 23 ? N CYS B 23 O TYR B 71 ? O TYR B 71 AA3 3 4 O LYS B 74 ? O LYS B 74 N SER B 63 ? N SER B 63 AA4 1 2 N LEU B 11 ? N LEU B 11 O ASN B 103 ? O ASN B 103 AA4 2 3 O THR B 102 ? O THR B 102 N TYR B 86 ? N TYR B 86 AA4 3 4 O SER B 85 ? O SER B 85 N GLN B 38 ? N GLN B 38 AA4 4 5 N TRP B 35 ? N TRP B 35 O LEU B 47 ? O LEU B 47 AA4 5 6 N TYR B 49 ? N TYR B 49 O THR B 53 ? O THR B 53 AA5 1 2 N ALA C 51 ? N ALA C 50 O PHE C 92 ? O PHE C 91 AA5 2 3 O VAL C 86 ? O VAL C 85 N PHE C 76 ? N PHE C 75 AA5 3 4 N ILE C 69 ? N ILE C 68 O LEU C 157 ? O LEU C 156 AA6 1 2 N SER D 7 ? N SER H 7 O SER D 21 ? O SER H 21 AA6 2 3 N LEU D 20 ? N LEU H 20 O LEU D 83 ? O LEU H 83 AA6 3 4 O PHE D 80 ? O PHE H 80 N LEU D 75 ? N LEU H 75 AA7 1 2 N VAL D 12 ? N VAL H 12 O THR D 128 ? O THR H 128 AA7 2 3 O THR D 125 ? O THR H 125 N TYR D 96 ? N TYR H 96 AA7 3 4 O PHE D 97 ? O PHE H 97 N VAL D 37 ? N VAL H 37 AA7 4 5 N ARG D 38 ? N ARG H 38 O GLU D 46 ? O GLU H 46 AA7 5 6 N ARG D 50 ? N ARG H 50 O ASP D 61 ? O ASP H 61 AA8 1 2 N VAL D 12 ? N VAL H 12 O THR D 128 ? O THR H 128 AA8 2 3 O THR D 125 ? O THR H 125 N TYR D 96 ? N TYR H 96 AA8 3 4 N ARG D 100 ? N ARG H 100 O ASP D 120 ? O ASP H 120 AA9 1 2 N THR E 5 ? N THR L 4 O ARG E 23 ? O ARG L 22 AA9 2 3 N VAL E 18 ? N VAL L 17 O ILE E 74 ? O ILE L 73 AA9 3 4 O SER E 71 ? O SER L 70 N SER E 64 ? N SER L 63 AB1 1 2 N VAL E 12 ? N VAL L 11 O THR E 107 ? O THR L 106 AB1 2 3 O THR E 104 ? O THR L 103 N TYR E 85 ? N TYR L 84 AB1 3 4 O GLU E 84 ? O GLU L 83 N LYS E 37 ? N LYS L 36 AB1 4 5 N TRP E 34 ? N TRP L 33 O LEU E 46 ? O LEU L 45 AB2 1 2 N VAL E 12 ? N VAL L 11 O THR E 107 ? O THR L 106 AB2 2 3 O THR E 104 ? O THR L 103 N TYR E 85 ? N TYR L 84 AB2 3 4 N SER E 89 ? N SER L 88 O VAL E 99 ? O VAL L 98 # _pdbx_entry_details.entry_id 9PV4 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A GLU 102 ? ? OD1 A ASP 103 ? ? 1.32 2 1 OE1 C GLU 128 ? ? NH2 C ARG 131 ? ? 1.55 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A PHE 24 ? ? CG A PHE 24 ? ? 1.395 1.509 -0.114 0.017 N 2 1 CB B PHE 62 ? ? CG B PHE 62 ? ? 1.402 1.509 -0.107 0.017 N 3 1 CG B TYR 96 ? ? CD1 B TYR 96 ? ? 1.290 1.387 -0.097 0.013 N 4 1 CB H PHE 80 ? ? CG H PHE 80 ? ? 1.398 1.509 -0.111 0.017 N 5 1 CG L TYR 1 ? ? CD2 L TYR 1 ? ? 1.490 1.387 0.103 0.013 N 6 1 CG L TYR 1 ? ? CD1 L TYR 1 ? ? 1.487 1.387 0.100 0.013 N 7 1 CE1 L TYR 1 ? ? CZ L TYR 1 ? ? 1.480 1.381 0.099 0.013 N 8 1 CZ L TYR 1 ? ? CE2 L TYR 1 ? ? 1.476 1.381 0.095 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 24 ? ? CZ B ARG 24 ? ? NH2 B ARG 24 ? ? 117.07 120.30 -3.23 0.50 N 2 1 CB B TYR 71 ? ? CG B TYR 71 ? ? CD2 B TYR 71 ? ? 115.77 121.00 -5.23 0.60 N 3 1 NE C ARG 60 ? ? CZ C ARG 60 ? ? NH2 C ARG 60 ? ? 116.76 120.30 -3.54 0.50 N 4 1 NE C ARG 88 ? ? CZ C ARG 88 ? ? NH2 C ARG 88 ? ? 117.03 120.30 -3.27 0.50 N 5 1 NE C ARG 120 ? ? CZ C ARG 120 ? ? NH2 C ARG 120 ? ? 117.10 120.30 -3.20 0.50 N 6 1 NE C ARG 131 ? ? CZ C ARG 131 ? ? NH1 C ARG 131 ? ? 123.69 120.30 3.39 0.50 N 7 1 NE C ARG 136 ? ? CZ C ARG 136 ? ? NH1 C ARG 136 ? ? 123.79 120.30 3.49 0.50 N 8 1 NE C ARG 150 ? ? CZ C ARG 150 ? ? NH2 C ARG 150 ? ? 115.82 120.30 -4.48 0.50 N 9 1 NE H ARG 50 ? ? CZ H ARG 50 ? ? NH1 H ARG 50 ? ? 124.10 120.30 3.80 0.50 N 10 1 NE L ARG 59 ? ? CZ L ARG 59 ? ? NH1 L ARG 59 ? ? 125.23 120.30 4.93 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 15 ? ? 87.21 -10.14 2 1 TYR A 104 ? ? 73.62 114.49 3 1 PHE A 105 ? ? -160.58 85.82 4 1 ASP A 107 ? ? -136.70 -56.11 5 1 HIS B 30 ? ? 50.17 -121.18 6 1 ALA B 51 ? ? 56.79 8.50 7 1 LYS B 52 ? ? -146.20 -30.63 8 1 SER B 63 ? ? -156.77 -158.89 9 1 ILE C 9 ? ? -145.13 -4.56 10 1 GLN C 80 ? ? 66.21 60.53 11 1 PRO H 113 ? ? -85.32 46.60 12 1 ASN L 50 ? ? -167.60 75.45 13 1 SER L 88 ? ? -161.68 -160.28 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9PV4 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9PV4 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 4 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 72061 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 RECOMBINANT COMPLEX '10E8-GT12 immunogen in complex with human Fab 10E8 and mouse Fab W6-10' ? ? ? '1, 2, 3, 4, 5' 2 1 RECOMBINANT COMPLEX 'W6-10 mouse Fab heavy chain and W6-10 mouse Fab light chain' ? ? ? '1, 2' 3 1 RECOMBINANT COMPLEX '10E8 human Fab heavy chain and 10E8 human Fab light chain' ? ? ? '4, 5' 4 1 RECOMBINANT COMPLEX '10E8-GT12 immunogen' ? ? ? 3 # _em_imaging.entry_id 9PV4 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS GLACIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 200 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 1800 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'UltrAuFoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9PV4 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9PV4 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C GLU 0 ? C GLU 1 2 1 Y 1 C THR 1 ? C THR 2 3 1 Y 1 C GLY 2 ? C GLY 3 4 1 Y 1 C ASN 3 ? C ASN 4 5 1 Y 1 C VAL 4 ? C VAL 5 6 1 Y 1 C THR 5 ? C THR 6 7 1 Y 1 C GLN 6 ? C GLN 7 8 1 Y 1 C SER 159 ? C SER 160 9 1 Y 1 C GLY 160 ? C GLY 161 10 1 Y 1 C GLY 161 ? C GLY 162 11 1 Y 1 C SER 162 ? C SER 163 12 1 Y 1 C GLY 163 ? C GLY 164 13 1 Y 1 C LEU 164 ? C LEU 165 14 1 Y 1 C ASN 165 ? C ASN 166 15 1 Y 1 H SER 131 ? D SER 131 16 1 Y 1 L SER 0 ? E SER 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_admin.current_status REL _em_admin.deposition_date 2025-08-01 _em_admin.deposition_site RCSB _em_admin.entry_id 9PV4 _em_admin.last_update 2025-12-10 _em_admin.map_release_date 2025-12-10 _em_admin.title 'MPER-GT12 immunogen in complex with human Fab 10E8 and mouse Fab W6-10' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 50 mM ? 1 Tris 1 150 mM ? 2 'sodium chloride' 1 0.005 mM ? 3 'Lauryl Maltose Neopentyl Glycol' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue _em_entity_assembly_naturalsource.details ? ? 1 2 32630 'synthetic construct' ? ? ? ? ? ? ? 2 3 10090 'Mus musculus' ? ? ? ? ? ? ? 3 4 9606 'Homo sapiens' ? ? ? ? ? ? ? 4 5 32630 'synthetic construct' ? ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 1 2 9606 'Homo sapiens' ? ? ? 2 3 9606 'Homo sapiens' ? ? ? 3 4 9606 'Homo sapiens' ? ? ? 4 5 9606 'Homo sapiens' ? ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 43.2 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? ? 'MODEL REFINEMENT' ? 2 ? ? ? PHENIX 1.20.1_4487 ? 'IMAGE ACQUISITION' ? 3 ? ? 1 EPU ? ? MASKING ? 4 ? ? ? ? ? ? 'CTF CORRECTION' ? 5 1 ? ? cryoSPARC ? ? 'LAYERLINE INDEXING' ? 6 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 7 ? ? ? ? ? ? 'MODEL FITTING' ? 8 ? ? ? ? ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC ? ? # _em_specimen.concentration 2.9 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Bill & Melinda Gates Foundation' 'United States' INV-002916 1 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' 'UM1 AI144462' 2 # _atom_sites.entry_id 9PV4 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #