HEADER VIRAL PROTEIN 04-AUG-25 9PW4 TITLE STRUCTURE OF V30V4 IN COMPLEX WITH SARS-COV-2 SPIKE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: S GLYCOPROTEIN,E2,PEPLOMER PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: DERIVED FROM THE D614G VARIANT, INCLUDING SIGNAL COMPND 7 SEQUENCE; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: V30V4 FAB LIGHT CHAIN; COMPND 10 CHAIN: D; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: SP1-77 FAB LIGHT CHAIN; COMPND 14 CHAIN: F; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: V30V4 FAB HEAVY CHAIN; COMPND 18 CHAIN: C; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: SP1-77 FAB HEAVY CHAIN; COMPND 22 CHAIN: E; COMPND 23 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: S, 2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 15 ORGANISM_TAXID: 10090; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 MOL_ID: 4; SOURCE 19 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 23 MOL_ID: 5; SOURCE 24 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 25 ORGANISM_TAXID: 10090; SOURCE 26 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SARS-COV-2 G614 ANTIBODY, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR Y.J.WANG,G.KIBRIA,D.WESEMANN,B.CHEN REVDAT 1 19-NOV-25 9PW4 0 JRNL AUTH J.DINGUS,D.K.YOO,S.KUMAR,G.KIBRIA,Y.J.WANG,Z.ALLAHYARI, JRNL AUTH 2 J.CHEN,S.SAGHEI,B.CHEN,D.WESEMANN JRNL TITL AFFINITY MATURATION AND LIGHT-CHAIN-MEDIATED PARATOPE JRNL TITL 2 DIVERSIFICATION ANTICIPATES VIRAL EVOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.850 REMARK 3 NUMBER OF PARTICLES : 244319 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9PW4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-AUG-25. REMARK 100 THE DEPOSITION ID IS D_1000298530. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : STRUCTURE OF V30V4 IN COMPLEX REMARK 245 WITH SARS-COV-2 SPIKE; SARS-COV- REMARK 245 2 SPIKE S1; V30V4 FAB; SP1-77 REMARK 245 FAB REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5668.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, F, C, E, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PHE A 2 REMARK 465 VAL A 3 REMARK 465 PHE A 4 REMARK 465 LEU A 5 REMARK 465 VAL A 6 REMARK 465 LEU A 7 REMARK 465 LEU A 8 REMARK 465 PRO A 9 REMARK 465 LEU A 10 REMARK 465 VAL A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 GLN A 14 REMARK 465 CYS A 15 REMARK 465 VAL A 16 REMARK 465 ASN A 17 REMARK 465 LEU A 18 REMARK 465 THR A 19 REMARK 465 THR A 20 REMARK 465 ARG A 21 REMARK 465 THR A 22 REMARK 465 GLN A 23 REMARK 465 LEU A 24 REMARK 465 PRO A 25 REMARK 465 PRO A 26 REMARK 465 ALA A 27 REMARK 465 TYR A 28 REMARK 465 THR A 29 REMARK 465 ASN A 30 REMARK 465 SER A 31 REMARK 465 PHE A 32 REMARK 465 THR A 33 REMARK 465 ARG A 34 REMARK 465 GLY A 35 REMARK 465 VAL A 36 REMARK 465 TYR A 37 REMARK 465 TYR A 38 REMARK 465 PRO A 39 REMARK 465 ASP A 40 REMARK 465 LYS A 41 REMARK 465 VAL A 42 REMARK 465 PHE A 43 REMARK 465 ARG A 44 REMARK 465 SER A 45 REMARK 465 SER A 46 REMARK 465 VAL A 47 REMARK 465 LEU A 48 REMARK 465 HIS A 49 REMARK 465 SER A 50 REMARK 465 THR A 51 REMARK 465 GLN A 52 REMARK 465 ASP A 53 REMARK 465 LEU A 54 REMARK 465 PHE A 55 REMARK 465 LEU A 56 REMARK 465 PRO A 57 REMARK 465 PHE A 58 REMARK 465 PHE A 59 REMARK 465 SER A 60 REMARK 465 ASN A 61 REMARK 465 VAL A 62 REMARK 465 THR A 63 REMARK 465 TRP A 64 REMARK 465 PHE A 65 REMARK 465 HIS A 66 REMARK 465 ALA A 67 REMARK 465 ILE A 68 REMARK 465 HIS A 69 REMARK 465 VAL A 70 REMARK 465 SER A 71 REMARK 465 GLY A 72 REMARK 465 THR A 73 REMARK 465 ASN A 74 REMARK 465 GLY A 75 REMARK 465 THR A 76 REMARK 465 LYS A 77 REMARK 465 ARG A 78 REMARK 465 PHE A 79 REMARK 465 ASP A 80 REMARK 465 ASN A 81 REMARK 465 PRO A 82 REMARK 465 VAL A 83 REMARK 465 LEU A 84 REMARK 465 PRO A 85 REMARK 465 PHE A 86 REMARK 465 ASN A 87 REMARK 465 ASP A 88 REMARK 465 GLY A 89 REMARK 465 VAL A 90 REMARK 465 TYR A 91 REMARK 465 PHE A 92 REMARK 465 ALA A 93 REMARK 465 SER A 94 REMARK 465 THR A 95 REMARK 465 GLU A 96 REMARK 465 LYS A 97 REMARK 465 SER A 98 REMARK 465 ASN A 99 REMARK 465 ILE A 100 REMARK 465 ILE A 101 REMARK 465 ARG A 102 REMARK 465 GLY A 103 REMARK 465 TRP A 104 REMARK 465 ILE A 105 REMARK 465 PHE A 106 REMARK 465 GLY A 107 REMARK 465 THR A 108 REMARK 465 THR A 109 REMARK 465 LEU A 110 REMARK 465 ASP A 111 REMARK 465 SER A 112 REMARK 465 LYS A 113 REMARK 465 THR A 114 REMARK 465 GLN A 115 REMARK 465 SER A 116 REMARK 465 LEU A 117 REMARK 465 LEU A 118 REMARK 465 ILE A 119 REMARK 465 VAL A 120 REMARK 465 ASN A 121 REMARK 465 ASN A 122 REMARK 465 ALA A 123 REMARK 465 THR A 124 REMARK 465 ASN A 125 REMARK 465 VAL A 126 REMARK 465 VAL A 127 REMARK 465 ILE A 128 REMARK 465 LYS A 129 REMARK 465 VAL A 130 REMARK 465 CYS A 131 REMARK 465 GLU A 132 REMARK 465 PHE A 133 REMARK 465 GLN A 134 REMARK 465 PHE A 135 REMARK 465 CYS A 136 REMARK 465 ASN A 137 REMARK 465 ASP A 138 REMARK 465 PRO A 139 REMARK 465 PHE A 140 REMARK 465 LEU A 141 REMARK 465 GLY A 142 REMARK 465 VAL A 143 REMARK 465 TYR A 144 REMARK 465 TYR A 145 REMARK 465 HIS A 146 REMARK 465 LYS A 147 REMARK 465 ASN A 148 REMARK 465 ASN A 149 REMARK 465 LYS A 150 REMARK 465 SER A 151 REMARK 465 TRP A 152 REMARK 465 MET A 153 REMARK 465 GLU A 154 REMARK 465 SER A 155 REMARK 465 GLU A 156 REMARK 465 PHE A 157 REMARK 465 ARG A 158 REMARK 465 VAL A 159 REMARK 465 TYR A 160 REMARK 465 SER A 161 REMARK 465 SER A 162 REMARK 465 ALA A 163 REMARK 465 ASN A 164 REMARK 465 ASN A 165 REMARK 465 CYS A 166 REMARK 465 THR A 167 REMARK 465 PHE A 168 REMARK 465 GLU A 169 REMARK 465 TYR A 170 REMARK 465 VAL A 171 REMARK 465 SER A 172 REMARK 465 GLN A 173 REMARK 465 PRO A 174 REMARK 465 PHE A 175 REMARK 465 LEU A 176 REMARK 465 MET A 177 REMARK 465 ASP A 178 REMARK 465 LEU A 179 REMARK 465 GLU A 180 REMARK 465 GLY A 181 REMARK 465 LYS A 182 REMARK 465 GLN A 183 REMARK 465 GLY A 184 REMARK 465 ASN A 185 REMARK 465 PHE A 186 REMARK 465 LYS A 187 REMARK 465 ASN A 188 REMARK 465 LEU A 189 REMARK 465 ARG A 190 REMARK 465 GLU A 191 REMARK 465 PHE A 192 REMARK 465 VAL A 193 REMARK 465 PHE A 194 REMARK 465 LYS A 195 REMARK 465 ASN A 196 REMARK 465 ILE A 197 REMARK 465 ASP A 198 REMARK 465 GLY A 199 REMARK 465 TYR A 200 REMARK 465 PHE A 201 REMARK 465 LYS A 202 REMARK 465 ILE A 203 REMARK 465 TYR A 204 REMARK 465 SER A 205 REMARK 465 LYS A 206 REMARK 465 HIS A 207 REMARK 465 THR A 208 REMARK 465 PRO A 209 REMARK 465 ILE A 210 REMARK 465 ASN A 211 REMARK 465 LEU A 212 REMARK 465 VAL A 213 REMARK 465 ARG A 214 REMARK 465 ASP A 215 REMARK 465 LEU A 216 REMARK 465 PRO A 217 REMARK 465 GLN A 218 REMARK 465 GLY A 219 REMARK 465 PHE A 220 REMARK 465 SER A 221 REMARK 465 ALA A 222 REMARK 465 LEU A 223 REMARK 465 GLU A 224 REMARK 465 PRO A 225 REMARK 465 LEU A 226 REMARK 465 VAL A 227 REMARK 465 ASP A 228 REMARK 465 LEU A 229 REMARK 465 PRO A 230 REMARK 465 ILE A 231 REMARK 465 GLY A 232 REMARK 465 ILE A 233 REMARK 465 ASN A 234 REMARK 465 ILE A 235 REMARK 465 THR A 236 REMARK 465 ARG A 237 REMARK 465 PHE A 238 REMARK 465 GLN A 239 REMARK 465 THR A 240 REMARK 465 LEU A 241 REMARK 465 LEU A 242 REMARK 465 ALA A 243 REMARK 465 LEU A 244 REMARK 465 HIS A 245 REMARK 465 ARG A 246 REMARK 465 SER A 247 REMARK 465 TYR A 248 REMARK 465 LEU A 249 REMARK 465 THR A 250 REMARK 465 PRO A 251 REMARK 465 GLY A 252 REMARK 465 ASP A 253 REMARK 465 SER A 254 REMARK 465 SER A 255 REMARK 465 SER A 256 REMARK 465 GLY A 257 REMARK 465 TRP A 258 REMARK 465 THR A 259 REMARK 465 ALA A 260 REMARK 465 GLY A 261 REMARK 465 ALA A 262 REMARK 465 ALA A 263 REMARK 465 ALA A 264 REMARK 465 TYR A 265 REMARK 465 TYR A 266 REMARK 465 VAL A 267 REMARK 465 GLY A 268 REMARK 465 TYR A 269 REMARK 465 LEU A 270 REMARK 465 GLN A 271 REMARK 465 PRO A 272 REMARK 465 ARG A 273 REMARK 465 THR A 274 REMARK 465 PHE A 275 REMARK 465 LEU A 276 REMARK 465 LEU A 277 REMARK 465 LYS A 278 REMARK 465 TYR A 279 REMARK 465 ASN A 280 REMARK 465 GLU A 281 REMARK 465 ASN A 282 REMARK 465 GLY A 283 REMARK 465 THR A 284 REMARK 465 ILE A 285 REMARK 465 THR A 286 REMARK 465 ASP A 287 REMARK 465 ALA A 288 REMARK 465 VAL A 289 REMARK 465 ASP A 290 REMARK 465 CYS A 291 REMARK 465 ALA A 292 REMARK 465 LEU A 293 REMARK 465 ASP A 294 REMARK 465 PRO A 295 REMARK 465 LEU A 296 REMARK 465 SER A 297 REMARK 465 GLU A 298 REMARK 465 THR A 299 REMARK 465 LYS A 300 REMARK 465 CYS A 301 REMARK 465 THR A 302 REMARK 465 LEU A 303 REMARK 465 LYS A 304 REMARK 465 SER A 305 REMARK 465 PHE A 306 REMARK 465 THR A 307 REMARK 465 VAL A 308 REMARK 465 GLU A 309 REMARK 465 LYS A 310 REMARK 465 GLY A 311 REMARK 465 ILE A 312 REMARK 465 TYR A 313 REMARK 465 GLN A 314 REMARK 465 THR A 315 REMARK 465 SER A 316 REMARK 465 ASN A 317 REMARK 465 PHE A 318 REMARK 465 ARG A 319 REMARK 465 VAL A 320 REMARK 465 GLN A 321 REMARK 465 PRO A 322 REMARK 465 THR A 323 REMARK 465 GLU A 324 REMARK 465 SER A 325 REMARK 465 ILE A 326 REMARK 465 VAL A 327 REMARK 465 ARG A 328 REMARK 465 THR A 531 REMARK 465 ASN A 532 REMARK 465 LEU A 533 REMARK 465 VAL A 534 REMARK 465 LYS A 535 REMARK 465 ASN A 536 REMARK 465 LYS A 537 REMARK 465 CYS A 538 REMARK 465 VAL A 539 REMARK 465 ASN A 540 REMARK 465 PHE A 541 REMARK 465 ASN A 542 REMARK 465 PHE A 543 REMARK 465 ASN A 544 REMARK 465 GLY A 545 REMARK 465 LEU A 546 REMARK 465 THR A 547 REMARK 465 GLY A 548 REMARK 465 THR A 549 REMARK 465 GLY A 550 REMARK 465 VAL A 551 REMARK 465 LEU A 552 REMARK 465 THR A 553 REMARK 465 GLU A 554 REMARK 465 SER A 555 REMARK 465 ASN A 556 REMARK 465 LYS A 557 REMARK 465 LYS A 558 REMARK 465 PHE A 559 REMARK 465 LEU A 560 REMARK 465 PRO A 561 REMARK 465 PHE A 562 REMARK 465 GLN A 563 REMARK 465 GLN A 564 REMARK 465 PHE A 565 REMARK 465 GLY A 566 REMARK 465 ARG A 567 REMARK 465 ASP A 568 REMARK 465 ILE A 569 REMARK 465 ALA A 570 REMARK 465 ASP A 571 REMARK 465 THR A 572 REMARK 465 THR A 573 REMARK 465 ASP A 574 REMARK 465 ALA A 575 REMARK 465 VAL A 576 REMARK 465 ARG A 577 REMARK 465 ASP A 578 REMARK 465 PRO A 579 REMARK 465 GLN A 580 REMARK 465 THR A 581 REMARK 465 LEU A 582 REMARK 465 GLU A 583 REMARK 465 ILE A 584 REMARK 465 LEU A 585 REMARK 465 ASP A 586 REMARK 465 ILE A 587 REMARK 465 THR A 588 REMARK 465 PRO A 589 REMARK 465 CYS A 590 REMARK 465 SER A 591 REMARK 465 PHE A 592 REMARK 465 GLY A 593 REMARK 465 GLY A 594 REMARK 465 VAL A 595 REMARK 465 SER A 596 REMARK 465 VAL A 597 REMARK 465 ILE A 598 REMARK 465 THR A 599 REMARK 465 PRO A 600 REMARK 465 GLY A 601 REMARK 465 THR A 602 REMARK 465 ASN A 603 REMARK 465 THR A 604 REMARK 465 SER A 605 REMARK 465 ASN A 606 REMARK 465 GLN A 607 REMARK 465 VAL A 608 REMARK 465 ALA A 609 REMARK 465 VAL A 610 REMARK 465 LEU A 611 REMARK 465 TYR A 612 REMARK 465 GLN A 613 REMARK 465 GLY A 614 REMARK 465 VAL A 615 REMARK 465 ASN A 616 REMARK 465 CYS A 617 REMARK 465 THR A 618 REMARK 465 GLU A 619 REMARK 465 VAL A 620 REMARK 465 PRO A 621 REMARK 465 VAL A 622 REMARK 465 ALA A 623 REMARK 465 ILE A 624 REMARK 465 HIS A 625 REMARK 465 ALA A 626 REMARK 465 ASP A 627 REMARK 465 GLN A 628 REMARK 465 LEU A 629 REMARK 465 THR A 630 REMARK 465 PRO A 631 REMARK 465 THR A 632 REMARK 465 TRP A 633 REMARK 465 ARG A 634 REMARK 465 VAL A 635 REMARK 465 TYR A 636 REMARK 465 SER A 637 REMARK 465 THR A 638 REMARK 465 GLY A 639 REMARK 465 SER A 640 REMARK 465 ASN A 641 REMARK 465 VAL A 642 REMARK 465 PHE A 643 REMARK 465 GLN A 644 REMARK 465 THR A 645 REMARK 465 ARG A 646 REMARK 465 ALA A 647 REMARK 465 GLY A 648 REMARK 465 CYS A 649 REMARK 465 LEU A 650 REMARK 465 ILE A 651 REMARK 465 GLY A 652 REMARK 465 ALA A 653 REMARK 465 GLU A 654 REMARK 465 HIS A 655 REMARK 465 VAL A 656 REMARK 465 ASN A 657 REMARK 465 ASN A 658 REMARK 465 SER A 659 REMARK 465 TYR A 660 REMARK 465 GLU A 661 REMARK 465 CYS A 662 REMARK 465 ASP A 663 REMARK 465 ILE A 664 REMARK 465 PRO A 665 REMARK 465 ILE A 666 REMARK 465 GLY A 667 REMARK 465 ALA A 668 REMARK 465 GLY A 669 REMARK 465 ILE A 670 REMARK 465 CYS A 671 REMARK 465 ALA A 672 REMARK 465 SER A 673 REMARK 465 TYR A 674 REMARK 465 GLN A 675 REMARK 465 THR A 676 REMARK 465 GLN A 677 REMARK 465 THR A 678 REMARK 465 ASN A 679 REMARK 465 SER A 680 REMARK 465 PRO A 681 REMARK 465 ARG A 682 REMARK 465 ARG A 683 REMARK 465 ALA A 684 REMARK 465 ARG D 213 REMARK 465 GLY D 214 REMARK 465 GLU D 215 REMARK 465 CYS D 216 REMARK 465 CYS F 213 REMARK 465 LYS C 134 REMARK 465 SER C 135 REMARK 465 THR C 136 REMARK 465 SER C 137 REMARK 465 GLY C 138 REMARK 465 LYS C 219 REMARK 465 SER C 220 REMARK 465 CYS C 221 REMARK 465 ASP C 222 REMARK 465 LYS C 223 REMARK 465 THR C 224 REMARK 465 HIS C 225 REMARK 465 THR C 226 REMARK 465 SER E 139 REMARK 465 ARG E 140 REMARK 465 SER E 141 REMARK 465 THR E 142 REMARK 465 SER E 143 REMARK 465 GLU E 144 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 428 32.12 -96.92 REMARK 500 HIS A 519 59.22 -91.87 REMARK 500 PRO A 527 47.45 -83.23 REMARK 500 ALA D 52 -9.55 72.17 REMARK 500 SER F 30 -127.53 56.55 REMARK 500 ALA F 51 -5.99 72.48 REMARK 500 SER F 52 -25.06 -140.72 REMARK 500 ASP F 150 54.09 39.20 REMARK 500 GLU C 26 -1.49 66.40 REMARK 500 PHE C 100 -124.99 61.23 REMARK 500 ALA C 104 -155.48 54.69 REMARK 500 GLN C 176 -166.40 -79.74 REMARK 500 PRO E 41 105.35 -56.68 REMARK 500 TYR E 103 173.26 65.33 REMARK 500 SER E 214 -2.34 66.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG B 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-71899 RELATED DB: EMDB REMARK 900 STRUCTURE OF V30V4 IN COMPLEX WITH SARS-COV-2 SPIKE DBREF 9PW4 A 1 684 UNP P0DTC2 SPIKE_SARS2 1 684 DBREF 9PW4 D 1 216 PDB 9PW4 9PW4 1 216 DBREF 9PW4 F 1 213 PDB 9PW4 9PW4 1 213 DBREF 9PW4 C 1 226 PDB 9PW4 9PW4 1 226 DBREF 9PW4 E 1 225 PDB 9PW4 9PW4 1 225 SEQADV 9PW4 GLY A 614 UNP P0DTC2 ASP 614 VARIANT SEQRES 1 A 684 MET PHE VAL PHE LEU VAL LEU LEU PRO LEU VAL SER SER SEQRES 2 A 684 GLN CYS VAL ASN LEU THR THR ARG THR GLN LEU PRO PRO SEQRES 3 A 684 ALA TYR THR ASN SER PHE THR ARG GLY VAL TYR TYR PRO SEQRES 4 A 684 ASP LYS VAL PHE ARG SER SER VAL LEU HIS SER THR GLN SEQRES 5 A 684 ASP LEU PHE LEU PRO PHE PHE SER ASN VAL THR TRP PHE SEQRES 6 A 684 HIS ALA ILE HIS VAL SER GLY THR ASN GLY THR LYS ARG SEQRES 7 A 684 PHE ASP ASN PRO VAL LEU PRO PHE ASN ASP GLY VAL TYR SEQRES 8 A 684 PHE ALA SER THR GLU LYS SER ASN ILE ILE ARG GLY TRP SEQRES 9 A 684 ILE PHE GLY THR THR LEU ASP SER LYS THR GLN SER LEU SEQRES 10 A 684 LEU ILE VAL ASN ASN ALA THR ASN VAL VAL ILE LYS VAL SEQRES 11 A 684 CYS GLU PHE GLN PHE CYS ASN ASP PRO PHE LEU GLY VAL SEQRES 12 A 684 TYR TYR HIS LYS ASN ASN LYS SER TRP MET GLU SER GLU SEQRES 13 A 684 PHE ARG VAL TYR SER SER ALA ASN ASN CYS THR PHE GLU SEQRES 14 A 684 TYR VAL SER GLN PRO PHE LEU MET ASP LEU GLU GLY LYS SEQRES 15 A 684 GLN GLY ASN PHE LYS ASN LEU ARG GLU PHE VAL PHE LYS SEQRES 16 A 684 ASN ILE ASP GLY TYR PHE LYS ILE TYR SER LYS HIS THR SEQRES 17 A 684 PRO ILE ASN LEU VAL ARG ASP LEU PRO GLN GLY PHE SER SEQRES 18 A 684 ALA LEU GLU PRO LEU VAL ASP LEU PRO ILE GLY ILE ASN SEQRES 19 A 684 ILE THR ARG PHE GLN THR LEU LEU ALA LEU HIS ARG SER SEQRES 20 A 684 TYR LEU THR PRO GLY ASP SER SER SER GLY TRP THR ALA SEQRES 21 A 684 GLY ALA ALA ALA TYR TYR VAL GLY TYR LEU GLN PRO ARG SEQRES 22 A 684 THR PHE LEU LEU LYS TYR ASN GLU ASN GLY THR ILE THR SEQRES 23 A 684 ASP ALA VAL ASP CYS ALA LEU ASP PRO LEU SER GLU THR SEQRES 24 A 684 LYS CYS THR LEU LYS SER PHE THR VAL GLU LYS GLY ILE SEQRES 25 A 684 TYR GLN THR SER ASN PHE ARG VAL GLN PRO THR GLU SER SEQRES 26 A 684 ILE VAL ARG PHE PRO ASN ILE THR ASN LEU CYS PRO PHE SEQRES 27 A 684 GLY GLU VAL PHE ASN ALA THR ARG PHE ALA SER VAL TYR SEQRES 28 A 684 ALA TRP ASN ARG LYS ARG ILE SER ASN CYS VAL ALA ASP SEQRES 29 A 684 TYR SER VAL LEU TYR ASN SER ALA SER PHE SER THR PHE SEQRES 30 A 684 LYS CYS TYR GLY VAL SER PRO THR LYS LEU ASN ASP LEU SEQRES 31 A 684 CYS PHE THR ASN VAL TYR ALA ASP SER PHE VAL ILE ARG SEQRES 32 A 684 GLY ASP GLU VAL ARG GLN ILE ALA PRO GLY GLN THR GLY SEQRES 33 A 684 LYS ILE ALA ASP TYR ASN TYR LYS LEU PRO ASP ASP PHE SEQRES 34 A 684 THR GLY CYS VAL ILE ALA TRP ASN SER ASN ASN LEU ASP SEQRES 35 A 684 SER LYS VAL GLY GLY ASN TYR ASN TYR LEU TYR ARG LEU SEQRES 36 A 684 PHE ARG LYS SER ASN LEU LYS PRO PHE GLU ARG ASP ILE SEQRES 37 A 684 SER THR GLU ILE TYR GLN ALA GLY SER THR PRO CYS ASN SEQRES 38 A 684 GLY VAL GLU GLY PHE ASN CYS TYR PHE PRO LEU GLN SER SEQRES 39 A 684 TYR GLY PHE GLN PRO THR ASN GLY VAL GLY TYR GLN PRO SEQRES 40 A 684 TYR ARG VAL VAL VAL LEU SER PHE GLU LEU LEU HIS ALA SEQRES 41 A 684 PRO ALA THR VAL CYS GLY PRO LYS LYS SER THR ASN LEU SEQRES 42 A 684 VAL LYS ASN LYS CYS VAL ASN PHE ASN PHE ASN GLY LEU SEQRES 43 A 684 THR GLY THR GLY VAL LEU THR GLU SER ASN LYS LYS PHE SEQRES 44 A 684 LEU PRO PHE GLN GLN PHE GLY ARG ASP ILE ALA ASP THR SEQRES 45 A 684 THR ASP ALA VAL ARG ASP PRO GLN THR LEU GLU ILE LEU SEQRES 46 A 684 ASP ILE THR PRO CYS SER PHE GLY GLY VAL SER VAL ILE SEQRES 47 A 684 THR PRO GLY THR ASN THR SER ASN GLN VAL ALA VAL LEU SEQRES 48 A 684 TYR GLN GLY VAL ASN CYS THR GLU VAL PRO VAL ALA ILE SEQRES 49 A 684 HIS ALA ASP GLN LEU THR PRO THR TRP ARG VAL TYR SER SEQRES 50 A 684 THR GLY SER ASN VAL PHE GLN THR ARG ALA GLY CYS LEU SEQRES 51 A 684 ILE GLY ALA GLU HIS VAL ASN ASN SER TYR GLU CYS ASP SEQRES 52 A 684 ILE PRO ILE GLY ALA GLY ILE CYS ALA SER TYR GLN THR SEQRES 53 A 684 GLN THR ASN SER PRO ARG ARG ALA SEQRES 1 D 216 GLU ILE VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 D 216 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG VAL SER SEQRES 3 D 216 GLN SER VAL SER SER ASN SER LEU ALA TRP TYR GLN GLN SEQRES 4 D 216 LYS PRO GLY GLN PRO PRO ARG LEU LEU ILE TYR GLY ALA SEQRES 5 D 216 SER SER ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 D 216 SER GLY SER GLY THR ASP PHE THR LEU THR ILE ASN ARG SEQRES 7 D 216 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 D 216 TYR GLY SER SER PRO PRO ILE THR PHE GLY GLN GLY THR SEQRES 9 D 216 ARG LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL SEQRES 10 D 216 PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY SEQRES 11 D 216 THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO SEQRES 12 D 216 ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU SEQRES 13 D 216 GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SEQRES 14 D 216 SER LYS ASP SER THR TYR SER LEU SER SER THR LEU THR SEQRES 15 D 216 LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA SEQRES 16 D 216 CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR SEQRES 17 D 216 LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 F 213 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 F 213 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 F 213 GLN ASP ILE SER ASP TYR LEU ASN TRP TYR GLN GLN GLN SEQRES 4 F 213 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ASP ALA SER SEQRES 5 F 213 ASN LEU GLU THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 F 213 GLY SER GLY THR ASP PHE THR PHE THR ILE SER SER LEU SEQRES 7 F 213 GLN PRO GLU ASP ILE GLY THR TYR TYR CYS GLN GLN TYR SEQRES 8 F 213 ASP ASN LEU PRO THR PHE GLY GLY GLY THR LYS LEU GLU SEQRES 9 F 213 ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE SEQRES 10 F 213 PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER SEQRES 11 F 213 VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA SEQRES 12 F 213 LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY SEQRES 13 F 213 ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SEQRES 14 F 213 SER THR TYR SER LEU SER SER THR LEU THR LEU SER LYS SEQRES 15 F 213 ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL SEQRES 16 F 213 THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE SEQRES 17 F 213 ASN ARG GLY GLU CYS SEQRES 1 C 226 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU ILE GLN SEQRES 2 C 226 PRO GLY GLY SER LEU ARG LEU SER CYS THR ALA SER GLU SEQRES 3 C 226 ILE ILE VAL SER ARG ASN TYR MET SER TRP VAL ARG GLN SEQRES 4 C 226 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER LEU ILE TYR SEQRES 5 C 226 ALA GLY GLY SER THR PHE TYR ALA ASP SER VAL LYS GLY SEQRES 6 C 226 ARG PHE THR ILE SER ARG ASP ASP SER LYS ASN THR LEU SEQRES 7 C 226 TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA SEQRES 8 C 226 VAL TYR TYR CYS ALA ARG ASP LEU PHE GLU ALA GLY ALA SEQRES 9 C 226 THR ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 C 226 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 C 226 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 C 226 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 C 226 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 C 226 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 C 226 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 C 226 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 C 226 ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 18 C 226 ASP LYS THR HIS THR SEQRES 1 E 225 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 E 225 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 E 225 TYR THR PHE THR GLY THR TYR ILE HIS TRP VAL ARG GLN SEQRES 4 E 225 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE ASN SEQRES 5 E 225 PRO ASN SER GLY GLY THR ASN PHE ALA GLN ILE PHE GLN SEQRES 6 E 225 GLY ARG VAL THR LEU THR ARG ASP THR SER ILE SER THR SEQRES 7 E 225 ALA TYR MET ASP LEU ASN ARG LEU LYS SER ASP ASP THR SEQRES 8 E 225 ALA VAL TYR TYR CYS ALA ARG ASP ARG VAL LEU TYR GLY SEQRES 9 E 225 ARG SER PHE GLY TRP TYR PHE ASP VAL TRP GLY ALA GLY SEQRES 10 E 225 THR THR VAL THR VAL SER SER ALA SER THR LYS GLY PRO SEQRES 11 E 225 SER VAL PHE PRO LEU ALA PRO CYS SER ARG SER THR SER SEQRES 12 E 225 GLU SER THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR SEQRES 13 E 225 PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA SEQRES 14 E 225 LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 E 225 SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL SEQRES 16 E 225 PRO SER SER SER LEU GLY THR LYS THR TYR THR CYS ASN SEQRES 17 E 225 VAL ASP HIS LYS PRO SER ASN THR LYS VAL ASP LYS ARG SEQRES 18 E 225 VAL GLU SER LYS HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET FUC B 4 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 6 NAG 2(C8 H15 N O6) FORMUL 6 BMA C6 H12 O6 FORMUL 6 FUC C6 H12 O5 HELIX 1 AA1 PHE A 338 ASN A 343 1 6 HELIX 2 AA2 TYR A 365 ASN A 370 1 6 HELIX 3 AA3 GLU A 406 ILE A 410 5 5 HELIX 4 AA4 GLY A 416 ASN A 422 1 7 HELIX 5 AA5 SER A 438 SER A 443 1 6 HELIX 6 AA6 SER D 30 ASN D 32 5 3 HELIX 7 AA7 SER D 123 SER D 129 1 7 HELIX 8 AA8 LYS D 185 GLU D 189 1 5 HELIX 9 AA9 GLN F 79 ILE F 83 5 5 HELIX 10 AB1 SER F 120 GLY F 127 1 8 HELIX 11 AB2 LYS F 182 LYS F 187 1 6 HELIX 12 AB3 ILE C 28 ASN C 32 5 5 HELIX 13 AB4 ARG C 86 THR C 90 5 5 HELIX 14 AB5 PHE C 100 GLY C 103 5 4 HELIX 15 AB6 PRO C 190 GLN C 197 1 8 HELIX 16 AB7 THR E 28 THR E 32 5 5 HELIX 17 AB8 LYS E 87 THR E 91 5 5 HELIX 18 AB9 SER E 167 ALA E 169 5 3 HELIX 19 AC1 SER E 198 LEU E 200 5 3 HELIX 20 AC2 PRO E 213 ASN E 215 5 3 SHEET 1 AA1 5 ASN A 354 ILE A 358 0 SHEET 2 AA1 5 ASN A 394 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AA1 5 PRO A 507 GLU A 516 -1 O VAL A 510 N PHE A 400 SHEET 4 AA1 5 GLY A 431 ASN A 437 -1 N ILE A 434 O VAL A 511 SHEET 5 AA1 5 THR A 376 TYR A 380 -1 N TYR A 380 O GLY A 431 SHEET 1 AA2 2 CYS A 391 PHE A 392 0 SHEET 2 AA2 2 VAL A 524 CYS A 525 -1 O VAL A 524 N PHE A 392 SHEET 1 AA3 2 LEU A 452 ARG A 454 0 SHEET 2 AA3 2 LEU A 492 SER A 494 -1 O GLN A 493 N TYR A 453 SHEET 1 AA4 4 LEU D 4 THR D 5 0 SHEET 2 AA4 4 ALA D 19 VAL D 25 -1 O ARG D 24 N THR D 5 SHEET 3 AA4 4 ASP D 71 ILE D 76 -1 O LEU D 74 N LEU D 21 SHEET 4 AA4 4 PHE D 63 SER D 68 -1 N SER D 64 O THR D 75 SHEET 1 AA5 6 THR D 10 SER D 12 0 SHEET 2 AA5 6 THR D 104 GLU D 107 1 O ARG D 105 N LEU D 11 SHEET 3 AA5 6 VAL D 86 TYR D 92 -1 N TYR D 87 O THR D 104 SHEET 4 AA5 6 LEU D 34 GLN D 39 -1 N ALA D 35 O GLN D 90 SHEET 5 AA5 6 ARG D 46 TYR D 50 -1 O LEU D 48 N TRP D 36 SHEET 6 AA5 6 SER D 54 ARG D 55 -1 O SER D 54 N TYR D 50 SHEET 1 AA6 4 THR D 10 SER D 12 0 SHEET 2 AA6 4 THR D 104 GLU D 107 1 O ARG D 105 N LEU D 11 SHEET 3 AA6 4 VAL D 86 TYR D 92 -1 N TYR D 87 O THR D 104 SHEET 4 AA6 4 ILE D 98 PHE D 100 -1 O THR D 99 N GLN D 91 SHEET 1 AA7 4 SER D 116 PHE D 120 0 SHEET 2 AA7 4 THR D 131 PHE D 141 -1 O ASN D 139 N SER D 116 SHEET 3 AA7 4 TYR D 175 SER D 184 -1 O LEU D 183 N ALA D 132 SHEET 4 AA7 4 SER D 161 VAL D 165 -1 N GLN D 162 O THR D 180 SHEET 1 AA8 3 ALA D 146 LYS D 151 0 SHEET 2 AA8 3 TYR D 194 HIS D 200 -1 O GLU D 197 N GLN D 149 SHEET 3 AA8 3 VAL D 207 PHE D 211 -1 O PHE D 211 N TYR D 194 SHEET 1 AA9 2 MET F 4 THR F 5 0 SHEET 2 AA9 2 GLN F 24 ALA F 25 -1 O GLN F 24 N THR F 5 SHEET 1 AB1 6 SER F 10 ALA F 13 0 SHEET 2 AB1 6 THR F 101 ILE F 105 1 O LYS F 102 N LEU F 11 SHEET 3 AB1 6 THR F 85 GLN F 90 -1 N TYR F 86 O THR F 101 SHEET 4 AB1 6 LEU F 33 GLN F 38 -1 N ASN F 34 O GLN F 89 SHEET 5 AB1 6 LYS F 45 TYR F 49 -1 O ILE F 48 N TRP F 35 SHEET 6 AB1 6 ASN F 53 LEU F 54 -1 O ASN F 53 N TYR F 49 SHEET 1 AB2 4 SER F 10 ALA F 13 0 SHEET 2 AB2 4 THR F 101 ILE F 105 1 O LYS F 102 N LEU F 11 SHEET 3 AB2 4 THR F 85 GLN F 90 -1 N TYR F 86 O THR F 101 SHEET 4 AB2 4 THR F 96 PHE F 97 -1 O THR F 96 N GLN F 90 SHEET 1 AB3 3 VAL F 19 THR F 22 0 SHEET 2 AB3 3 ASP F 70 ILE F 75 -1 O PHE F 73 N ILE F 21 SHEET 3 AB3 3 PHE F 62 SER F 67 -1 N SER F 63 O THR F 74 SHEET 1 AB4 4 SER F 113 PHE F 117 0 SHEET 2 AB4 4 THR F 128 PHE F 138 -1 O LEU F 134 N PHE F 115 SHEET 3 AB4 4 TYR F 172 SER F 181 -1 O LEU F 174 N LEU F 135 SHEET 4 AB4 4 SER F 158 VAL F 162 -1 N GLN F 159 O THR F 177 SHEET 1 AB5 4 ALA F 152 GLN F 154 0 SHEET 2 AB5 4 LYS F 144 VAL F 149 -1 N VAL F 149 O ALA F 152 SHEET 3 AB5 4 VAL F 190 THR F 196 -1 O ALA F 192 N LYS F 148 SHEET 4 AB5 4 VAL F 204 ASN F 209 -1 O PHE F 208 N TYR F 191 SHEET 1 AB6 4 GLN C 3 SER C 7 0 SHEET 2 AB6 4 SER C 17 SER C 25 -1 O THR C 23 N VAL C 5 SHEET 3 AB6 4 THR C 77 ASN C 83 -1 O MET C 82 N LEU C 18 SHEET 4 AB6 4 PHE C 67 ASP C 72 -1 N THR C 68 O GLN C 81 SHEET 1 AB7 6 LEU C 11 ILE C 12 0 SHEET 2 AB7 6 THR C 112 VAL C 116 1 O THR C 115 N ILE C 12 SHEET 3 AB7 6 ALA C 91 ASP C 98 -1 N TYR C 93 O THR C 112 SHEET 4 AB7 6 TYR C 33 GLN C 39 -1 N VAL C 37 O TYR C 94 SHEET 5 AB7 6 LEU C 45 ILE C 51 -1 O VAL C 48 N TRP C 36 SHEET 6 AB7 6 THR C 57 TYR C 59 -1 O PHE C 58 N LEU C 50 SHEET 1 AB8 4 LEU C 11 ILE C 12 0 SHEET 2 AB8 4 THR C 112 VAL C 116 1 O THR C 115 N ILE C 12 SHEET 3 AB8 4 ALA C 91 ASP C 98 -1 N TYR C 93 O THR C 112 SHEET 4 AB8 4 THR C 105 TRP C 108 -1 O TYR C 107 N ARG C 97 SHEET 1 AB9 4 SER C 125 LEU C 129 0 SHEET 2 AB9 4 ALA C 142 TYR C 150 -1 O GLY C 144 N LEU C 129 SHEET 3 AB9 4 TYR C 181 THR C 188 -1 O LEU C 183 N VAL C 147 SHEET 4 AB9 4 HIS C 169 THR C 170 -1 N HIS C 169 O VAL C 186 SHEET 1 AC1 4 SER C 125 LEU C 129 0 SHEET 2 AC1 4 ALA C 142 TYR C 150 -1 O GLY C 144 N LEU C 129 SHEET 3 AC1 4 TYR C 181 THR C 188 -1 O LEU C 183 N VAL C 147 SHEET 4 AC1 4 VAL C 174 LEU C 175 -1 N VAL C 174 O SER C 182 SHEET 1 AC2 3 THR C 156 TRP C 159 0 SHEET 2 AC2 3 TYR C 199 ASN C 204 -1 O ASN C 202 N SER C 158 SHEET 3 AC2 3 ASP C 213 VAL C 216 -1 O VAL C 216 N TYR C 199 SHEET 1 AC3 4 GLN E 3 GLN E 6 0 SHEET 2 AC3 4 VAL E 18 SER E 25 -1 O LYS E 23 N VAL E 5 SHEET 3 AC3 4 THR E 78 LEU E 83 -1 O MET E 81 N VAL E 20 SHEET 4 AC3 4 VAL E 68 ASP E 73 -1 N THR E 71 O TYR E 80 SHEET 1 AC4 6 GLU E 10 LYS E 12 0 SHEET 2 AC4 6 THR E 118 VAL E 122 1 O THR E 121 N LYS E 12 SHEET 3 AC4 6 ALA E 92 ARG E 98 -1 N ALA E 92 O VAL E 120 SHEET 4 AC4 6 ILE E 34 GLN E 39 -1 N HIS E 35 O ALA E 97 SHEET 5 AC4 6 LEU E 45 ILE E 51 -1 O MET E 48 N TRP E 36 SHEET 6 AC4 6 THR E 58 PHE E 60 -1 O ASN E 59 N TRP E 50 SHEET 1 AC5 4 GLU E 10 LYS E 12 0 SHEET 2 AC5 4 THR E 118 VAL E 122 1 O THR E 121 N LYS E 12 SHEET 3 AC5 4 ALA E 92 ARG E 98 -1 N ALA E 92 O VAL E 120 SHEET 4 AC5 4 VAL E 113 TRP E 114 -1 O VAL E 113 N ARG E 98 SHEET 1 AC6 4 PRO E 134 LEU E 135 0 SHEET 2 AC6 4 THR E 146 CYS E 151 -1 O GLY E 150 N LEU E 135 SHEET 3 AC6 4 SER E 191 PRO E 196 -1 O VAL E 195 N ALA E 147 SHEET 4 AC6 4 VAL E 174 THR E 176 -1 N HIS E 175 O VAL E 192 SHEET 1 AC7 3 VAL E 161 TRP E 165 0 SHEET 2 AC7 3 TYR E 205 HIS E 211 -1 O ASN E 208 N SER E 164 SHEET 3 AC7 3 THR E 216 VAL E 218 -1 O VAL E 218 N VAL E 209 SHEET 1 AC8 3 VAL E 161 TRP E 165 0 SHEET 2 AC8 3 TYR E 205 HIS E 211 -1 O ASN E 208 N SER E 164 SHEET 3 AC8 3 ARG E 221 VAL E 222 -1 O VAL E 222 N TYR E 205 SHEET 1 AC9 2 VAL E 180 LEU E 181 0 SHEET 2 AC9 2 TYR E 187 SER E 188 -1 O SER E 188 N VAL E 180 SSBOND 1 CYS A 336 CYS A 361 1555 1555 2.04 SSBOND 2 CYS A 391 CYS A 525 1555 1555 2.03 SSBOND 3 CYS A 480 CYS A 488 1555 1555 2.03 SSBOND 4 CYS D 23 CYS D 89 1555 1555 2.03 SSBOND 5 CYS D 136 CYS D 196 1555 1555 2.03 SSBOND 6 CYS F 23 CYS F 88 1555 1555 2.03 SSBOND 7 CYS F 133 CYS F 193 1555 1555 2.03 SSBOND 8 CYS C 22 CYS C 95 1555 1555 2.03 SSBOND 9 CYS C 145 CYS C 201 1555 1555 2.03 SSBOND 10 CYS E 22 CYS E 96 1555 1555 2.03 SSBOND 11 CYS E 151 CYS E 207 1555 1555 2.03 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O6 NAG B 1 C1 FUC B 4 1555 1555 1.45 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.44 CISPEP 1 SER D 95 PRO D 96 0 2.94 CISPEP 2 TYR F 139 PRO F 140 0 3.06 CISPEP 3 PHE E 157 PRO E 158 0 -1.83 CISPEP 4 GLU E 159 PRO E 160 0 1.14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 1602 SER A 530 TER 3228 ASN D 212 TER 4859 GLU F 212 TER 6455 PRO C 218 TER 8116 LYS E 225 HETATM 8117 C1 NAG B 1 156.430 137.076 149.241 1.00 74.43 C HETATM 8118 C2 NAG B 1 156.236 135.744 149.939 1.00 79.49 C HETATM 8119 C3 NAG B 1 157.544 134.958 149.945 1.00 85.31 C HETATM 8120 C4 NAG B 1 158.146 134.877 148.547 1.00 81.70 C HETATM 8121 C5 NAG B 1 158.179 136.253 147.881 1.00 82.36 C HETATM 8122 C6 NAG B 1 158.588 136.210 146.426 1.00 81.41 C HETATM 8123 C7 NAG B 1 154.459 136.087 151.601 1.00 80.12 C HETATM 8124 C8 NAG B 1 154.144 136.282 153.053 1.00 72.80 C HETATM 8125 N2 NAG B 1 155.753 135.941 151.297 1.00 84.39 N HETATM 8126 O3 NAG B 1 157.299 133.647 150.443 1.00 82.48 O HETATM 8127 O4 NAG B 1 159.484 134.410 148.663 1.00 82.48 O HETATM 8128 O5 NAG B 1 156.880 136.858 147.927 1.00 74.04 O HETATM 8129 O6 NAG B 1 157.717 135.400 145.648 1.00 86.56 O HETATM 8130 O7 NAG B 1 153.583 136.059 150.744 1.00 82.18 O HETATM 8131 C1 NAG B 2 159.679 133.204 147.904 1.00 95.25 C HETATM 8132 C2 NAG B 2 161.169 133.105 147.598 1.00 96.69 C HETATM 8133 C3 NAG B 2 161.462 131.825 146.825 1.00101.70 C HETATM 8134 C4 NAG B 2 160.913 130.616 147.571 1.00102.85 C HETATM 8135 C5 NAG B 2 159.436 130.821 147.901 1.00100.03 C HETATM 8136 C6 NAG B 2 158.864 129.719 148.762 1.00 99.25 C HETATM 8137 C7 NAG B 2 162.020 135.403 147.445 1.00 99.94 C HETATM 8138 C8 NAG B 2 162.465 136.500 146.525 1.00 97.61 C HETATM 8139 N2 NAG B 2 161.629 134.268 146.857 1.00 98.97 N HETATM 8140 O3 NAG B 2 162.869 131.700 146.650 1.00102.58 O HETATM 8141 O4 NAG B 2 161.048 129.446 146.772 1.00105.91 O HETATM 8142 O5 NAG B 2 159.259 132.047 148.626 1.00 97.69 O HETATM 8143 O6 NAG B 2 157.806 130.199 149.581 1.00 96.56 O HETATM 8144 O7 NAG B 2 162.011 135.539 148.664 1.00 98.23 O HETATM 8145 C1 BMA B 3 162.174 128.673 147.235 1.00118.54 C HETATM 8146 C2 BMA B 3 162.020 127.235 146.694 1.00118.28 C HETATM 8147 C3 BMA B 3 163.287 126.422 146.976 1.00120.41 C HETATM 8148 C4 BMA B 3 164.556 127.186 146.562 1.00119.40 C HETATM 8149 C5 BMA B 3 164.567 128.571 147.218 1.00117.96 C HETATM 8150 C6 BMA B 3 165.769 129.406 146.818 1.00116.33 C HETATM 8151 O2 BMA B 3 161.844 127.247 145.285 1.00115.00 O HETATM 8152 O3 BMA B 3 163.249 125.157 146.326 1.00116.93 O HETATM 8153 O4 BMA B 3 165.711 126.463 146.958 1.00115.29 O HETATM 8154 O5 BMA B 3 163.390 129.265 146.796 1.00119.99 O HETATM 8155 O6 BMA B 3 165.641 130.690 147.420 1.00116.48 O HETATM 8156 C1 FUC B 4 158.395 135.063 144.414 1.00 75.13 C HETATM 8157 C2 FUC B 4 157.578 133.974 143.676 1.00 73.78 C HETATM 8158 C3 FUC B 4 156.242 134.533 143.189 1.00 72.92 C HETATM 8159 C4 FUC B 4 156.472 135.765 142.310 1.00 78.30 C HETATM 8160 C5 FUC B 4 157.338 136.792 143.049 1.00 79.33 C HETATM 8161 C6 FUC B 4 157.782 137.939 142.153 1.00 75.81 C HETATM 8162 O2 FUC B 4 157.387 132.809 144.467 1.00 77.66 O HETATM 8163 O3 FUC B 4 155.569 133.561 142.393 1.00 75.57 O HETATM 8164 O4 FUC B 4 157.100 135.385 141.100 1.00 79.60 O HETATM 8165 O5 FUC B 4 158.547 136.211 143.591 1.00 74.13 O CONECT 63 270 CONECT 270 63 CONECT 500 1566 CONECT 1214 1271 CONECT 1271 1214 CONECT 1566 500 CONECT 1765 2276 CONECT 2276 1765 CONECT 2627 3106 CONECT 3106 2627 CONECT 3392 3897 CONECT 3897 3392 CONECT 4234 4713 CONECT 4713 4234 CONECT 5011 5591 CONECT 5591 5011 CONECT 5903 6317 CONECT 6317 5903 CONECT 6610 7197 CONECT 7197 6610 CONECT 7557 7970 CONECT 7970 7557 CONECT 8117 8118 8128 CONECT 8118 8117 8119 8125 CONECT 8119 8118 8120 8126 CONECT 8120 8119 8121 8127 CONECT 8121 8120 8122 8128 CONECT 8122 8121 8129 CONECT 8123 8124 8125 8130 CONECT 8124 8123 CONECT 8125 8118 8123 CONECT 8126 8119 CONECT 8127 8120 8131 CONECT 8128 8117 8121 CONECT 8129 8122 8156 CONECT 8130 8123 CONECT 8131 8127 8132 8142 CONECT 8132 8131 8133 8139 CONECT 8133 8132 8134 8140 CONECT 8134 8133 8135 8141 CONECT 8135 8134 8136 8142 CONECT 8136 8135 8143 CONECT 8137 8138 8139 8144 CONECT 8138 8137 CONECT 8139 8132 8137 CONECT 8140 8133 CONECT 8141 8134 8145 CONECT 8142 8131 8135 CONECT 8143 8136 CONECT 8144 8137 CONECT 8145 8141 8146 8154 CONECT 8146 8145 8147 8151 CONECT 8147 8146 8148 8152 CONECT 8148 8147 8149 8153 CONECT 8149 8148 8150 8154 CONECT 8150 8149 8155 CONECT 8151 8146 CONECT 8152 8147 CONECT 8153 8148 CONECT 8154 8145 8149 CONECT 8155 8150 CONECT 8156 8129 8157 8165 CONECT 8157 8156 8158 8162 CONECT 8158 8157 8159 8163 CONECT 8159 8158 8160 8164 CONECT 8160 8159 8161 8165 CONECT 8161 8160 CONECT 8162 8157 CONECT 8163 8158 CONECT 8164 8159 CONECT 8165 8156 8160 MASTER 652 0 4 20 104 0 0 6 8160 5 71 123 END