data_9QDY # _entry.id 9QDY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.410 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9QDY pdb_00009qdy 10.2210/pdb9qdy/pdb WWPDB D_1292146140 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-03-18 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9QDY _pdbx_database_status.recvd_initial_deposition_date 2025-03-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 2 _pdbx_contact_author.email michal.walczak@captortherapeutics.com _pdbx_contact_author.name_first Michal _pdbx_contact_author.name_last Walczak _pdbx_contact_author.name_mi J _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2301-052X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Skowron, A.N.' 1 0009-0000-8904-0401 'Gorecka-Minakowska, K.M.' 2 0000-0002-9843-3888 'Klejnot, M.' 3 0009-0008-8934-1894 'Pastok, M.W.' 4 0000-0002-0183-6876 'Wisniewski, J.' 5 0000-0002-4861-5755 'Walczak, M.J.' 6 0000-0003-2301-052X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Novel chemical probes and conformational flexibility of GID4 - a substrate receptor of the Human CTLH E3 ligase complex' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Skowron, A.N.' 1 0009-0000-8904-0401 primary 'Gorecka-Minakowska, K.M.' 2 0000-0002-9843-3888 primary 'Klejnot, M.' 3 0009-0008-8934-1894 primary 'Pastok, M.W.' 4 0000-0002-0183-6876 primary 'Wisniewski, J.' 5 0000-0002-4861-5755 primary 'Walczak, M.J.' 6 0000-0003-2301-052X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Glucose-induced degradation protein 4 homolog' 19547.725 1 ? ? ? ? 2 non-polymer syn '~{N}-[3-fluoranyl-5-(5-methylfuran-2-yl)phenyl]-4-methyl-piperidine-1-carboximidamide' 315.385 1 ? ? ? ? 3 water nat water 18.015 15 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Vacuolar import and degradation protein 24 homolog' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYLKIKGLTEEYPTLTTFFEGEIISKKHPFLTRKWDADEDVDRKHWG KFLAFYQYAKSFNSDDFDYEELKNGDYVFMRWKEQFLVPDHTIKDISGASFAGFYYICFQKSAASIEGYYYHRSSEWYQS LNLTHV ; _entity_poly.pdbx_seq_one_letter_code_can ;SGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYLKIKGLTEEYPTLTTFFEGEIISKKHPFLTRKWDADEDVDRKHWG KFLAFYQYAKSFNSDDFDYEELKNGDYVFMRWKEQFLVPDHTIKDISGASFAGFYYICFQKSAASIEGYYYHRSSEWYQS LNLTHV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '~{N}-[3-fluoranyl-5-(5-methylfuran-2-yl)phenyl]-4-methyl-piperidine-1-carboximidamide' A1I6B 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 SER n 1 4 LYS n 1 5 PHE n 1 6 ARG n 1 7 GLY n 1 8 HIS n 1 9 GLN n 1 10 LYS n 1 11 SER n 1 12 LYS n 1 13 GLY n 1 14 ASN n 1 15 SER n 1 16 TYR n 1 17 ASP n 1 18 VAL n 1 19 GLU n 1 20 VAL n 1 21 VAL n 1 22 LEU n 1 23 GLN n 1 24 HIS n 1 25 VAL n 1 26 ASP n 1 27 THR n 1 28 GLY n 1 29 ASN n 1 30 SER n 1 31 TYR n 1 32 LEU n 1 33 CYS n 1 34 GLY n 1 35 TYR n 1 36 LEU n 1 37 LYS n 1 38 ILE n 1 39 LYS n 1 40 GLY n 1 41 LEU n 1 42 THR n 1 43 GLU n 1 44 GLU n 1 45 TYR n 1 46 PRO n 1 47 THR n 1 48 LEU n 1 49 THR n 1 50 THR n 1 51 PHE n 1 52 PHE n 1 53 GLU n 1 54 GLY n 1 55 GLU n 1 56 ILE n 1 57 ILE n 1 58 SER n 1 59 LYS n 1 60 LYS n 1 61 HIS n 1 62 PRO n 1 63 PHE n 1 64 LEU n 1 65 THR n 1 66 ARG n 1 67 LYS n 1 68 TRP n 1 69 ASP n 1 70 ALA n 1 71 ASP n 1 72 GLU n 1 73 ASP n 1 74 VAL n 1 75 ASP n 1 76 ARG n 1 77 LYS n 1 78 HIS n 1 79 TRP n 1 80 GLY n 1 81 LYS n 1 82 PHE n 1 83 LEU n 1 84 ALA n 1 85 PHE n 1 86 TYR n 1 87 GLN n 1 88 TYR n 1 89 ALA n 1 90 LYS n 1 91 SER n 1 92 PHE n 1 93 ASN n 1 94 SER n 1 95 ASP n 1 96 ASP n 1 97 PHE n 1 98 ASP n 1 99 TYR n 1 100 GLU n 1 101 GLU n 1 102 LEU n 1 103 LYS n 1 104 ASN n 1 105 GLY n 1 106 ASP n 1 107 TYR n 1 108 VAL n 1 109 PHE n 1 110 MET n 1 111 ARG n 1 112 TRP n 1 113 LYS n 1 114 GLU n 1 115 GLN n 1 116 PHE n 1 117 LEU n 1 118 VAL n 1 119 PRO n 1 120 ASP n 1 121 HIS n 1 122 THR n 1 123 ILE n 1 124 LYS n 1 125 ASP n 1 126 ILE n 1 127 SER n 1 128 GLY n 1 129 ALA n 1 130 SER n 1 131 PHE n 1 132 ALA n 1 133 GLY n 1 134 PHE n 1 135 TYR n 1 136 TYR n 1 137 ILE n 1 138 CYS n 1 139 PHE n 1 140 GLN n 1 141 LYS n 1 142 SER n 1 143 ALA n 1 144 ALA n 1 145 SER n 1 146 ILE n 1 147 GLU n 1 148 GLY n 1 149 TYR n 1 150 TYR n 1 151 TYR n 1 152 HIS n 1 153 ARG n 1 154 SER n 1 155 SER n 1 156 GLU n 1 157 TRP n 1 158 TYR n 1 159 GLN n 1 160 SER n 1 161 LEU n 1 162 ASN n 1 163 LEU n 1 164 THR n 1 165 HIS n 1 166 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 166 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'GID4, C17orf39, VID24' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1I6B non-polymer . '~{N}-[3-fluoranyl-5-(5-methylfuran-2-yl)phenyl]-4-methyl-piperidine-1-carboximidamide' ? 'C18 H22 F N3 O' 315.385 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 124 124 SER SER A . n A 1 2 GLY 2 125 125 GLY GLY A . n A 1 3 SER 3 126 126 SER SER A . n A 1 4 LYS 4 127 127 LYS LYS A . n A 1 5 PHE 5 128 128 PHE PHE A . n A 1 6 ARG 6 129 129 ARG ARG A . n A 1 7 GLY 7 130 130 GLY GLY A . n A 1 8 HIS 8 131 131 HIS HIS A . n A 1 9 GLN 9 132 132 GLN GLN A . n A 1 10 LYS 10 133 133 LYS LYS A . n A 1 11 SER 11 134 134 SER SER A . n A 1 12 LYS 12 135 135 LYS LYS A . n A 1 13 GLY 13 136 136 GLY GLY A . n A 1 14 ASN 14 137 137 ASN ASN A . n A 1 15 SER 15 138 138 SER SER A . n A 1 16 TYR 16 139 139 TYR TYR A . n A 1 17 ASP 17 140 140 ASP ASP A . n A 1 18 VAL 18 141 141 VAL VAL A . n A 1 19 GLU 19 142 142 GLU GLU A . n A 1 20 VAL 20 143 143 VAL VAL A . n A 1 21 VAL 21 144 144 VAL VAL A . n A 1 22 LEU 22 145 145 LEU LEU A . n A 1 23 GLN 23 146 146 GLN GLN A . n A 1 24 HIS 24 147 147 HIS HIS A . n A 1 25 VAL 25 148 148 VAL VAL A . n A 1 26 ASP 26 149 149 ASP ASP A . n A 1 27 THR 27 150 150 THR THR A . n A 1 28 GLY 28 151 151 GLY GLY A . n A 1 29 ASN 29 152 152 ASN ASN A . n A 1 30 SER 30 153 153 SER SER A . n A 1 31 TYR 31 154 154 TYR TYR A . n A 1 32 LEU 32 155 155 LEU LEU A . n A 1 33 CYS 33 156 156 CYS CYS A . n A 1 34 GLY 34 157 157 GLY GLY A . n A 1 35 TYR 35 158 158 TYR TYR A . n A 1 36 LEU 36 159 159 LEU LEU A . n A 1 37 LYS 37 160 160 LYS LYS A . n A 1 38 ILE 38 161 161 ILE ILE A . n A 1 39 LYS 39 162 162 LYS LYS A . n A 1 40 GLY 40 163 163 GLY GLY A . n A 1 41 LEU 41 164 164 LEU LEU A . n A 1 42 THR 42 165 165 THR THR A . n A 1 43 GLU 43 166 166 GLU GLU A . n A 1 44 GLU 44 167 167 GLU GLU A . n A 1 45 TYR 45 168 168 TYR TYR A . n A 1 46 PRO 46 169 169 PRO PRO A . n A 1 47 THR 47 170 170 THR THR A . n A 1 48 LEU 48 171 171 LEU LEU A . n A 1 49 THR 49 172 172 THR THR A . n A 1 50 THR 50 173 173 THR THR A . n A 1 51 PHE 51 174 174 PHE PHE A . n A 1 52 PHE 52 175 175 PHE PHE A . n A 1 53 GLU 53 176 176 GLU GLU A . n A 1 54 GLY 54 177 177 GLY GLY A . n A 1 55 GLU 55 178 178 GLU GLU A . n A 1 56 ILE 56 179 179 ILE ILE A . n A 1 57 ILE 57 180 180 ILE ILE A . n A 1 58 SER 58 181 181 SER SER A . n A 1 59 LYS 59 182 182 LYS LYS A . n A 1 60 LYS 60 183 183 LYS LYS A . n A 1 61 HIS 61 184 184 HIS HIS A . n A 1 62 PRO 62 185 185 PRO PRO A . n A 1 63 PHE 63 186 186 PHE PHE A . n A 1 64 LEU 64 187 187 LEU LEU A . n A 1 65 THR 65 188 188 THR THR A . n A 1 66 ARG 66 189 189 ARG ARG A . n A 1 67 LYS 67 190 190 LYS LYS A . n A 1 68 TRP 68 191 191 TRP TRP A . n A 1 69 ASP 69 192 192 ASP ASP A . n A 1 70 ALA 70 193 193 ALA ALA A . n A 1 71 ASP 71 194 194 ASP ASP A . n A 1 72 GLU 72 195 195 GLU GLU A . n A 1 73 ASP 73 196 196 ASP ASP A . n A 1 74 VAL 74 197 197 VAL VAL A . n A 1 75 ASP 75 198 198 ASP ASP A . n A 1 76 ARG 76 199 199 ARG ARG A . n A 1 77 LYS 77 200 200 LYS LYS A . n A 1 78 HIS 78 201 201 HIS HIS A . n A 1 79 TRP 79 202 202 TRP TRP A . n A 1 80 GLY 80 203 203 GLY GLY A . n A 1 81 LYS 81 204 204 LYS LYS A . n A 1 82 PHE 82 205 205 PHE PHE A . n A 1 83 LEU 83 206 206 LEU LEU A . n A 1 84 ALA 84 207 207 ALA ALA A . n A 1 85 PHE 85 208 208 PHE PHE A . n A 1 86 TYR 86 209 209 TYR TYR A . n A 1 87 GLN 87 210 210 GLN GLN A . n A 1 88 TYR 88 211 211 TYR TYR A . n A 1 89 ALA 89 212 212 ALA ALA A . n A 1 90 LYS 90 213 213 LYS LYS A . n A 1 91 SER 91 214 214 SER SER A . n A 1 92 PHE 92 215 ? ? ? A . n A 1 93 ASN 93 216 ? ? ? A . n A 1 94 SER 94 217 ? ? ? A . n A 1 95 ASP 95 218 ? ? ? A . n A 1 96 ASP 96 219 ? ? ? A . n A 1 97 PHE 97 220 ? ? ? A . n A 1 98 ASP 98 221 221 ASP ASP A . n A 1 99 TYR 99 222 222 TYR TYR A . n A 1 100 GLU 100 223 223 GLU GLU A . n A 1 101 GLU 101 224 224 GLU GLU A . n A 1 102 LEU 102 225 225 LEU LEU A . n A 1 103 LYS 103 226 226 LYS LYS A . n A 1 104 ASN 104 227 227 ASN ASN A . n A 1 105 GLY 105 228 228 GLY GLY A . n A 1 106 ASP 106 229 229 ASP ASP A . n A 1 107 TYR 107 230 230 TYR TYR A . n A 1 108 VAL 108 231 231 VAL VAL A . n A 1 109 PHE 109 232 232 PHE PHE A . n A 1 110 MET 110 233 233 MET MET A . n A 1 111 ARG 111 234 234 ARG ARG A . n A 1 112 TRP 112 235 235 TRP TRP A . n A 1 113 LYS 113 236 236 LYS LYS A . n A 1 114 GLU 114 237 237 GLU GLU A . n A 1 115 GLN 115 238 238 GLN GLN A . n A 1 116 PHE 116 239 239 PHE PHE A . n A 1 117 LEU 117 240 240 LEU LEU A . n A 1 118 VAL 118 241 241 VAL VAL A . n A 1 119 PRO 119 242 242 PRO PRO A . n A 1 120 ASP 120 243 243 ASP ASP A . n A 1 121 HIS 121 244 244 HIS HIS A . n A 1 122 THR 122 245 245 THR THR A . n A 1 123 ILE 123 246 ? ? ? A . n A 1 124 LYS 124 247 ? ? ? A . n A 1 125 ASP 125 248 248 ASP ASP A . n A 1 126 ILE 126 249 249 ILE ILE A . n A 1 127 SER 127 250 250 SER SER A . n A 1 128 GLY 128 251 251 GLY GLY A . n A 1 129 ALA 129 252 252 ALA ALA A . n A 1 130 SER 130 253 253 SER SER A . n A 1 131 PHE 131 254 254 PHE PHE A . n A 1 132 ALA 132 255 255 ALA ALA A . n A 1 133 GLY 133 256 256 GLY GLY A . n A 1 134 PHE 134 257 257 PHE PHE A . n A 1 135 TYR 135 258 258 TYR TYR A . n A 1 136 TYR 136 259 259 TYR TYR A . n A 1 137 ILE 137 260 260 ILE ILE A . n A 1 138 CYS 138 261 261 CYS CYS A . n A 1 139 PHE 139 262 262 PHE PHE A . n A 1 140 GLN 140 263 263 GLN GLN A . n A 1 141 LYS 141 264 264 LYS LYS A . n A 1 142 SER 142 265 265 SER SER A . n A 1 143 ALA 143 266 266 ALA ALA A . n A 1 144 ALA 144 267 267 ALA ALA A . n A 1 145 SER 145 268 268 SER SER A . n A 1 146 ILE 146 269 269 ILE ILE A . n A 1 147 GLU 147 270 270 GLU GLU A . n A 1 148 GLY 148 271 271 GLY GLY A . n A 1 149 TYR 149 272 272 TYR TYR A . n A 1 150 TYR 150 273 273 TYR TYR A . n A 1 151 TYR 151 274 274 TYR TYR A . n A 1 152 HIS 152 275 275 HIS HIS A . n A 1 153 ARG 153 276 276 ARG ARG A . n A 1 154 SER 154 277 277 SER SER A . n A 1 155 SER 155 278 278 SER SER A . n A 1 156 GLU 156 279 279 GLU GLU A . n A 1 157 TRP 157 280 280 TRP TRP A . n A 1 158 TYR 158 281 281 TYR TYR A . n A 1 159 GLN 159 282 282 GLN GLN A . n A 1 160 SER 160 283 283 SER SER A . n A 1 161 LEU 161 284 284 LEU LEU A . n A 1 162 ASN 162 285 285 ASN ASN A . n A 1 163 LEU 163 286 286 LEU LEU A . n A 1 164 THR 164 287 287 THR THR A . n A 1 165 HIS 165 288 288 HIS HIS A . n A 1 166 VAL 166 289 289 VAL VAL A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id A1I6B _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id A1I6B _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1I6B 1 301 301 A1I6B 135 A . C 3 HOH 1 401 13 HOH HOH A . C 3 HOH 2 402 12 HOH HOH A . C 3 HOH 3 403 9 HOH HOH A . C 3 HOH 4 404 3 HOH HOH A . C 3 HOH 5 405 5 HOH HOH A . C 3 HOH 6 406 17 HOH HOH A . C 3 HOH 7 407 15 HOH HOH A . C 3 HOH 8 408 16 HOH HOH A . C 3 HOH 9 409 11 HOH HOH A . C 3 HOH 10 410 7 HOH HOH A . C 3 HOH 11 411 4 HOH HOH A . C 3 HOH 12 412 1 HOH HOH A . C 3 HOH 13 413 6 HOH HOH A . C 3 HOH 14 414 18 HOH HOH A . C 3 HOH 15 415 8 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0419 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 110.38 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9QDY _cell.details ? _cell.formula_units_Z ? _cell.length_a 38.065 _cell.length_a_esd ? _cell.length_b 40.274 _cell.length_b_esd ? _cell.length_c 54.394 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9QDY _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9QDY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 38.48 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M Na HEPES pH 7.0, 15% PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-10-28 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.03318 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PETRA III, DESY BEAMLINE P11' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.03318 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline P11 _diffrn_source.pdbx_synchrotron_site 'PETRA III, DESY' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9QDY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.79 _reflns.d_resolution_low 40.27 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14211 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 95.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.27 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 3.89 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.987 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.79 _reflns_shell.d_res_low 1.90 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2114 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.028 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] 1.77 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -1.26 _refine.aniso_B[2][2] -0.65 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] -0.14 _refine.B_iso_max ? _refine.B_iso_mean 32.332 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.931 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9QDY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.10 _refine.ls_d_res_low 35.67 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8474 _refine.ls_number_reflns_R_free 446 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.14 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.21471 _refine.ls_R_factor_R_free 0.25414 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.21267 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.306 _refine.pdbx_overall_ESU_R_Free 0.219 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 9.184 _refine.overall_SU_ML 0.219 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 35.67 _refine_hist.number_atoms_solvent 15 _refine_hist.number_atoms_total 1356 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1341 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 0.012 1383 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.016 1218 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.461 1.677 1865 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.463 1.599 2810 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 8.255 5.000 155 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 22.105 7.222 9 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 18.829 10.000 224 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.059 0.200 180 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 1608 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 353 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.613 3.074 629 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.611 3.072 629 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 4.069 5.486 781 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 4.077 5.488 782 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.212 3.417 754 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.210 3.417 755 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 5.165 6.103 1085 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 7.091 33.56 1568 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 7.092 33.57 1566 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.154 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 31 _refine_ls_shell.number_reflns_R_work 592 _refine_ls_shell.percent_reflns_obs 93.12 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.371 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.correlation_coeff_Fo_to_Fc ? _refine_ls_shell.correlation_coeff_Fo_to_Fc_free ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.361 # _struct.entry_id 9QDY _struct.title 'GID4 in complex with Compound 9' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9QDY _struct_keywords.text 'Ligase, Ubiquitination, TPD' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GID4_HUMAN _struct_ref.pdbx_db_accession Q8IVV7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYLKIKGLTEEYPTLTTFFEGEIISKKHPFLTRKWDADEDVDRKHWG KFLAFYQYAKSFNSDDFDYEELKNGDYVFMRWKEQFLVPDHTIKDISGASFAGFYYICFQKSAASIEGYYYHRSSEWYQS LNLTHV ; _struct_ref.pdbx_align_begin 124 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9QDY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 166 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8IVV7 _struct_ref_seq.db_align_beg 124 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 289 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 124 _struct_ref_seq.pdbx_auth_seq_align_end 289 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 8950 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 27 ? ASN A 29 ? THR A 150 ASN A 152 5 ? 3 HELX_P HELX_P2 AA2 ASP A 71 ? GLY A 80 ? ASP A 194 GLY A 203 1 ? 10 HELX_P HELX_P3 AA3 LYS A 81 ? TYR A 88 ? LYS A 204 TYR A 211 5 ? 8 HELX_P HELX_P4 AA4 TYR A 99 ? ASN A 104 ? TYR A 222 ASN A 227 1 ? 6 HELX_P HELX_P5 AA5 GLY A 128 ? ALA A 132 ? GLY A 251 ALA A 255 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 9 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 4 ? SER A 11 ? LYS A 127 SER A 134 AA1 2 ASN A 14 ? ASP A 26 ? ASN A 137 ASP A 149 AA1 3 TYR A 31 ? LYS A 39 ? TYR A 154 LYS A 162 AA1 4 LEU A 48 ? ILE A 56 ? LEU A 171 ILE A 179 AA1 5 TYR A 107 ? LEU A 117 ? TYR A 230 LEU A 240 AA1 6 PHE A 134 ? GLN A 140 ? PHE A 257 GLN A 263 AA1 7 SER A 145 ? TYR A 151 ? SER A 268 TYR A 274 AA1 8 GLN A 159 ? HIS A 165 ? GLN A 282 HIS A 288 AA1 9 LYS A 4 ? SER A 11 ? LYS A 127 SER A 134 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 5 ? N PHE A 128 O VAL A 20 ? O VAL A 143 AA1 2 3 N GLU A 19 ? N GLU A 142 O LYS A 37 ? O LYS A 160 AA1 3 4 N LEU A 32 ? N LEU A 155 O GLY A 54 ? O GLY A 177 AA1 4 5 N PHE A 51 ? N PHE A 174 O GLN A 115 ? O GLN A 238 AA1 5 6 N VAL A 108 ? N VAL A 231 O PHE A 139 ? O PHE A 262 AA1 6 7 N CYS A 138 ? N CYS A 261 O GLU A 147 ? O GLU A 270 AA1 7 8 N ILE A 146 ? N ILE A 269 O LEU A 163 ? O LEU A 286 AA1 8 9 O SER A 160 ? O SER A 283 N LYS A 10 ? N LYS A 133 # _pdbx_entry_details.entry_id 9QDY _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 181 ? ? 179.61 178.36 2 1 ASP A 243 ? ? -69.48 47.86 3 1 HIS A 244 ? ? -179.69 -169.80 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 129 ? ? 0.140 'SIDE CHAIN' 2 1 ARG A 199 ? ? 0.221 'SIDE CHAIN' 3 1 ARG A 234 ? ? 0.108 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PHE 215 ? A PHE 92 2 1 Y 1 A ASN 216 ? A ASN 93 3 1 Y 1 A SER 217 ? A SER 94 4 1 Y 1 A ASP 218 ? A ASP 95 5 1 Y 1 A ASP 219 ? A ASP 96 6 1 Y 1 A PHE 220 ? A PHE 97 7 1 Y 1 A ILE 246 ? A ILE 123 8 1 Y 1 A LYS 247 ? A LYS 124 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1I6B C1 C N N 1 A1I6B C2 C Y N 2 A1I6B C3 C Y N 3 A1I6B C4 C Y N 4 A1I6B C5 C Y N 5 A1I6B C6 C Y N 6 A1I6B C7 C Y N 7 A1I6B N1 N N N 8 A1I6B N2 N N N 9 A1I6B N3 N N N 10 A1I6B C8 C Y N 11 A1I6B C9 C Y N 12 A1I6B C10 C Y N 13 A1I6B C11 C N N 14 A1I6B C12 C N N 15 A1I6B C13 C N N 16 A1I6B C14 C N N 17 A1I6B F1 F N N 18 A1I6B C15 C N N 19 A1I6B C16 C N N 20 A1I6B C17 C N N 21 A1I6B C18 C Y N 22 A1I6B O1 O Y N 23 A1I6B H1 H N N 24 A1I6B H2 H N N 25 A1I6B H3 H N N 26 A1I6B H4 H N N 27 A1I6B H5 H N N 28 A1I6B H6 H N N 29 A1I6B H7 H N N 30 A1I6B H8 H N N 31 A1I6B H9 H N N 32 A1I6B H10 H N N 33 A1I6B H11 H N N 34 A1I6B H12 H N N 35 A1I6B H13 H N N 36 A1I6B H14 H N N 37 A1I6B H15 H N N 38 A1I6B H16 H N N 39 A1I6B H17 H N N 40 A1I6B H18 H N N 41 A1I6B H19 H N N 42 A1I6B H20 H N N 43 A1I6B H21 H N N 44 A1I6B H22 H N N 45 ALA N N N N 46 ALA CA C N S 47 ALA C C N N 48 ALA O O N N 49 ALA CB C N N 50 ALA OXT O N N 51 ALA H H N N 52 ALA H2 H N N 53 ALA HA H N N 54 ALA HB1 H N N 55 ALA HB2 H N N 56 ALA HB3 H N N 57 ALA HXT H N N 58 ARG N N N N 59 ARG CA C N S 60 ARG C C N N 61 ARG O O N N 62 ARG CB C N N 63 ARG CG C N N 64 ARG CD C N N 65 ARG NE N N N 66 ARG CZ C N N 67 ARG NH1 N N N 68 ARG NH2 N N N 69 ARG OXT O N N 70 ARG H H N N 71 ARG H2 H N N 72 ARG HA H N N 73 ARG HB2 H N N 74 ARG HB3 H N N 75 ARG HG2 H N N 76 ARG HG3 H N N 77 ARG HD2 H N N 78 ARG HD3 H N N 79 ARG HE H N N 80 ARG HH11 H N N 81 ARG HH12 H N N 82 ARG HH21 H N N 83 ARG HH22 H N N 84 ARG HXT H N N 85 ASN N N N N 86 ASN CA C N S 87 ASN C C N N 88 ASN O O N N 89 ASN CB C N N 90 ASN CG C N N 91 ASN OD1 O N N 92 ASN ND2 N N N 93 ASN OXT O N N 94 ASN H H N N 95 ASN H2 H N N 96 ASN HA H N N 97 ASN HB2 H N N 98 ASN HB3 H N N 99 ASN HD21 H N N 100 ASN HD22 H N N 101 ASN HXT H N N 102 ASP N N N N 103 ASP CA C N S 104 ASP C C N N 105 ASP O O N N 106 ASP CB C N N 107 ASP CG C N N 108 ASP OD1 O N N 109 ASP OD2 O N N 110 ASP OXT O N N 111 ASP H H N N 112 ASP H2 H N N 113 ASP HA H N N 114 ASP HB2 H N N 115 ASP HB3 H N N 116 ASP HD2 H N N 117 ASP HXT H N N 118 CYS N N N N 119 CYS CA C N R 120 CYS C C N N 121 CYS O O N N 122 CYS CB C N N 123 CYS SG S N N 124 CYS OXT O N N 125 CYS H H N N 126 CYS H2 H N N 127 CYS HA H N N 128 CYS HB2 H N N 129 CYS HB3 H N N 130 CYS HG H N N 131 CYS HXT H N N 132 GLN N N N N 133 GLN CA C N S 134 GLN C C N N 135 GLN O O N N 136 GLN CB C N N 137 GLN CG C N N 138 GLN CD C N N 139 GLN OE1 O N N 140 GLN NE2 N N N 141 GLN OXT O N N 142 GLN H H N N 143 GLN H2 H N N 144 GLN HA H N N 145 GLN HB2 H N N 146 GLN HB3 H N N 147 GLN HG2 H N N 148 GLN HG3 H N N 149 GLN HE21 H N N 150 GLN HE22 H N N 151 GLN HXT H N N 152 GLU N N N N 153 GLU CA C N S 154 GLU C C N N 155 GLU O O N N 156 GLU CB C N N 157 GLU CG C N N 158 GLU CD C N N 159 GLU OE1 O N N 160 GLU OE2 O N N 161 GLU OXT O N N 162 GLU H H N N 163 GLU H2 H N N 164 GLU HA H N N 165 GLU HB2 H N N 166 GLU HB3 H N N 167 GLU HG2 H N N 168 GLU HG3 H N N 169 GLU HE2 H N N 170 GLU HXT H N N 171 GLY N N N N 172 GLY CA C N N 173 GLY C C N N 174 GLY O O N N 175 GLY OXT O N N 176 GLY H H N N 177 GLY H2 H N N 178 GLY HA2 H N N 179 GLY HA3 H N N 180 GLY HXT H N N 181 HIS N N N N 182 HIS CA C N S 183 HIS C C N N 184 HIS O O N N 185 HIS CB C N N 186 HIS CG C Y N 187 HIS ND1 N Y N 188 HIS CD2 C Y N 189 HIS CE1 C Y N 190 HIS NE2 N Y N 191 HIS OXT O N N 192 HIS H H N N 193 HIS H2 H N N 194 HIS HA H N N 195 HIS HB2 H N N 196 HIS HB3 H N N 197 HIS HD1 H N N 198 HIS HD2 H N N 199 HIS HE1 H N N 200 HIS HE2 H N N 201 HIS HXT H N N 202 HOH O O N N 203 HOH H1 H N N 204 HOH H2 H N N 205 ILE N N N N 206 ILE CA C N S 207 ILE C C N N 208 ILE O O N N 209 ILE CB C N S 210 ILE CG1 C N N 211 ILE CG2 C N N 212 ILE CD1 C N N 213 ILE OXT O N N 214 ILE H H N N 215 ILE H2 H N N 216 ILE HA H N N 217 ILE HB H N N 218 ILE HG12 H N N 219 ILE HG13 H N N 220 ILE HG21 H N N 221 ILE HG22 H N N 222 ILE HG23 H N N 223 ILE HD11 H N N 224 ILE HD12 H N N 225 ILE HD13 H N N 226 ILE HXT H N N 227 LEU N N N N 228 LEU CA C N S 229 LEU C C N N 230 LEU O O N N 231 LEU CB C N N 232 LEU CG C N N 233 LEU CD1 C N N 234 LEU CD2 C N N 235 LEU OXT O N N 236 LEU H H N N 237 LEU H2 H N N 238 LEU HA H N N 239 LEU HB2 H N N 240 LEU HB3 H N N 241 LEU HG H N N 242 LEU HD11 H N N 243 LEU HD12 H N N 244 LEU HD13 H N N 245 LEU HD21 H N N 246 LEU HD22 H N N 247 LEU HD23 H N N 248 LEU HXT H N N 249 LYS N N N N 250 LYS CA C N S 251 LYS C C N N 252 LYS O O N N 253 LYS CB C N N 254 LYS CG C N N 255 LYS CD C N N 256 LYS CE C N N 257 LYS NZ N N N 258 LYS OXT O N N 259 LYS H H N N 260 LYS H2 H N N 261 LYS HA H N N 262 LYS HB2 H N N 263 LYS HB3 H N N 264 LYS HG2 H N N 265 LYS HG3 H N N 266 LYS HD2 H N N 267 LYS HD3 H N N 268 LYS HE2 H N N 269 LYS HE3 H N N 270 LYS HZ1 H N N 271 LYS HZ2 H N N 272 LYS HZ3 H N N 273 LYS HXT H N N 274 MET N N N N 275 MET CA C N S 276 MET C C N N 277 MET O O N N 278 MET CB C N N 279 MET CG C N N 280 MET SD S N N 281 MET CE C N N 282 MET OXT O N N 283 MET H H N N 284 MET H2 H N N 285 MET HA H N N 286 MET HB2 H N N 287 MET HB3 H N N 288 MET HG2 H N N 289 MET HG3 H N N 290 MET HE1 H N N 291 MET HE2 H N N 292 MET HE3 H N N 293 MET HXT H N N 294 PHE N N N N 295 PHE CA C N S 296 PHE C C N N 297 PHE O O N N 298 PHE CB C N N 299 PHE CG C Y N 300 PHE CD1 C Y N 301 PHE CD2 C Y N 302 PHE CE1 C Y N 303 PHE CE2 C Y N 304 PHE CZ C Y N 305 PHE OXT O N N 306 PHE H H N N 307 PHE H2 H N N 308 PHE HA H N N 309 PHE HB2 H N N 310 PHE HB3 H N N 311 PHE HD1 H N N 312 PHE HD2 H N N 313 PHE HE1 H N N 314 PHE HE2 H N N 315 PHE HZ H N N 316 PHE HXT H N N 317 PRO N N N N 318 PRO CA C N S 319 PRO C C N N 320 PRO O O N N 321 PRO CB C N N 322 PRO CG C N N 323 PRO CD C N N 324 PRO OXT O N N 325 PRO H H N N 326 PRO HA H N N 327 PRO HB2 H N N 328 PRO HB3 H N N 329 PRO HG2 H N N 330 PRO HG3 H N N 331 PRO HD2 H N N 332 PRO HD3 H N N 333 PRO HXT H N N 334 SER N N N N 335 SER CA C N S 336 SER C C N N 337 SER O O N N 338 SER CB C N N 339 SER OG O N N 340 SER OXT O N N 341 SER H H N N 342 SER H2 H N N 343 SER HA H N N 344 SER HB2 H N N 345 SER HB3 H N N 346 SER HG H N N 347 SER HXT H N N 348 THR N N N N 349 THR CA C N S 350 THR C C N N 351 THR O O N N 352 THR CB C N R 353 THR OG1 O N N 354 THR CG2 C N N 355 THR OXT O N N 356 THR H H N N 357 THR H2 H N N 358 THR HA H N N 359 THR HB H N N 360 THR HG1 H N N 361 THR HG21 H N N 362 THR HG22 H N N 363 THR HG23 H N N 364 THR HXT H N N 365 TRP N N N N 366 TRP CA C N S 367 TRP C C N N 368 TRP O O N N 369 TRP CB C N N 370 TRP CG C Y N 371 TRP CD1 C Y N 372 TRP CD2 C Y N 373 TRP NE1 N Y N 374 TRP CE2 C Y N 375 TRP CE3 C Y N 376 TRP CZ2 C Y N 377 TRP CZ3 C Y N 378 TRP CH2 C Y N 379 TRP OXT O N N 380 TRP H H N N 381 TRP H2 H N N 382 TRP HA H N N 383 TRP HB2 H N N 384 TRP HB3 H N N 385 TRP HD1 H N N 386 TRP HE1 H N N 387 TRP HE3 H N N 388 TRP HZ2 H N N 389 TRP HZ3 H N N 390 TRP HH2 H N N 391 TRP HXT H N N 392 TYR N N N N 393 TYR CA C N S 394 TYR C C N N 395 TYR O O N N 396 TYR CB C N N 397 TYR CG C Y N 398 TYR CD1 C Y N 399 TYR CD2 C Y N 400 TYR CE1 C Y N 401 TYR CE2 C Y N 402 TYR CZ C Y N 403 TYR OH O N N 404 TYR OXT O N N 405 TYR H H N N 406 TYR H2 H N N 407 TYR HA H N N 408 TYR HB2 H N N 409 TYR HB3 H N N 410 TYR HD1 H N N 411 TYR HD2 H N N 412 TYR HE1 H N N 413 TYR HE2 H N N 414 TYR HH H N N 415 TYR HXT H N N 416 VAL N N N N 417 VAL CA C N S 418 VAL C C N N 419 VAL O O N N 420 VAL CB C N N 421 VAL CG1 C N N 422 VAL CG2 C N N 423 VAL OXT O N N 424 VAL H H N N 425 VAL H2 H N N 426 VAL HA H N N 427 VAL HB H N N 428 VAL HG11 H N N 429 VAL HG12 H N N 430 VAL HG13 H N N 431 VAL HG21 H N N 432 VAL HG22 H N N 433 VAL HG23 H N N 434 VAL HXT H N N 435 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1I6B C1 C2 sing N N 1 A1I6B C2 C3 doub Y N 2 A1I6B C2 O1 sing Y N 3 A1I6B C3 C4 sing Y N 4 A1I6B O1 C5 sing Y N 5 A1I6B C5 C4 doub Y N 6 A1I6B C5 C6 sing N N 7 A1I6B C7 C6 doub Y N 8 A1I6B C7 C8 sing Y N 9 A1I6B C6 C18 sing Y N 10 A1I6B F1 C8 sing N N 11 A1I6B C8 C9 doub Y N 12 A1I6B C18 C10 doub Y N 13 A1I6B C9 C10 sing Y N 14 A1I6B C10 N1 sing N N 15 A1I6B C15 C14 sing N N 16 A1I6B C16 C14 sing N N 17 A1I6B C16 C17 sing N N 18 A1I6B C13 C14 sing N N 19 A1I6B C13 C12 sing N N 20 A1I6B N1 C11 sing N N 21 A1I6B N3 C17 sing N N 22 A1I6B N3 C11 sing N N 23 A1I6B N3 C12 sing N N 24 A1I6B C11 N2 doub N N 25 A1I6B C1 H1 sing N N 26 A1I6B C1 H2 sing N N 27 A1I6B C1 H3 sing N N 28 A1I6B C3 H4 sing N N 29 A1I6B C4 H5 sing N N 30 A1I6B C7 H6 sing N N 31 A1I6B N1 H7 sing N N 32 A1I6B N2 H8 sing N N 33 A1I6B C9 H9 sing N N 34 A1I6B C12 H10 sing N N 35 A1I6B C12 H11 sing N N 36 A1I6B C13 H12 sing N N 37 A1I6B C13 H13 sing N N 38 A1I6B C14 H14 sing N N 39 A1I6B C15 H15 sing N N 40 A1I6B C15 H16 sing N N 41 A1I6B C15 H17 sing N N 42 A1I6B C16 H18 sing N N 43 A1I6B C16 H19 sing N N 44 A1I6B C17 H20 sing N N 45 A1I6B C17 H21 sing N N 46 A1I6B C18 H22 sing N N 47 ALA N CA sing N N 48 ALA N H sing N N 49 ALA N H2 sing N N 50 ALA CA C sing N N 51 ALA CA CB sing N N 52 ALA CA HA sing N N 53 ALA C O doub N N 54 ALA C OXT sing N N 55 ALA CB HB1 sing N N 56 ALA CB HB2 sing N N 57 ALA CB HB3 sing N N 58 ALA OXT HXT sing N N 59 ARG N CA sing N N 60 ARG N H sing N N 61 ARG N H2 sing N N 62 ARG CA C sing N N 63 ARG CA CB sing N N 64 ARG CA HA sing N N 65 ARG C O doub N N 66 ARG C OXT sing N N 67 ARG CB CG sing N N 68 ARG CB HB2 sing N N 69 ARG CB HB3 sing N N 70 ARG CG CD sing N N 71 ARG CG HG2 sing N N 72 ARG CG HG3 sing N N 73 ARG CD NE sing N N 74 ARG CD HD2 sing N N 75 ARG CD HD3 sing N N 76 ARG NE CZ sing N N 77 ARG NE HE sing N N 78 ARG CZ NH1 sing N N 79 ARG CZ NH2 doub N N 80 ARG NH1 HH11 sing N N 81 ARG NH1 HH12 sing N N 82 ARG NH2 HH21 sing N N 83 ARG NH2 HH22 sing N N 84 ARG OXT HXT sing N N 85 ASN N CA sing N N 86 ASN N H sing N N 87 ASN N H2 sing N N 88 ASN CA C sing N N 89 ASN CA CB sing N N 90 ASN CA HA sing N N 91 ASN C O doub N N 92 ASN C OXT sing N N 93 ASN CB CG sing N N 94 ASN CB HB2 sing N N 95 ASN CB HB3 sing N N 96 ASN CG OD1 doub N N 97 ASN CG ND2 sing N N 98 ASN ND2 HD21 sing N N 99 ASN ND2 HD22 sing N N 100 ASN OXT HXT sing N N 101 ASP N CA sing N N 102 ASP N H sing N N 103 ASP N H2 sing N N 104 ASP CA C sing N N 105 ASP CA CB sing N N 106 ASP CA HA sing N N 107 ASP C O doub N N 108 ASP C OXT sing N N 109 ASP CB CG sing N N 110 ASP CB HB2 sing N N 111 ASP CB HB3 sing N N 112 ASP CG OD1 doub N N 113 ASP CG OD2 sing N N 114 ASP OD2 HD2 sing N N 115 ASP OXT HXT sing N N 116 CYS N CA sing N N 117 CYS N H sing N N 118 CYS N H2 sing N N 119 CYS CA C sing N N 120 CYS CA CB sing N N 121 CYS CA HA sing N N 122 CYS C O doub N N 123 CYS C OXT sing N N 124 CYS CB SG sing N N 125 CYS CB HB2 sing N N 126 CYS CB HB3 sing N N 127 CYS SG HG sing N N 128 CYS OXT HXT sing N N 129 GLN N CA sing N N 130 GLN N H sing N N 131 GLN N H2 sing N N 132 GLN CA C sing N N 133 GLN CA CB sing N N 134 GLN CA HA sing N N 135 GLN C O doub N N 136 GLN C OXT sing N N 137 GLN CB CG sing N N 138 GLN CB HB2 sing N N 139 GLN CB HB3 sing N N 140 GLN CG CD sing N N 141 GLN CG HG2 sing N N 142 GLN CG HG3 sing N N 143 GLN CD OE1 doub N N 144 GLN CD NE2 sing N N 145 GLN NE2 HE21 sing N N 146 GLN NE2 HE22 sing N N 147 GLN OXT HXT sing N N 148 GLU N CA sing N N 149 GLU N H sing N N 150 GLU N H2 sing N N 151 GLU CA C sing N N 152 GLU CA CB sing N N 153 GLU CA HA sing N N 154 GLU C O doub N N 155 GLU C OXT sing N N 156 GLU CB CG sing N N 157 GLU CB HB2 sing N N 158 GLU CB HB3 sing N N 159 GLU CG CD sing N N 160 GLU CG HG2 sing N N 161 GLU CG HG3 sing N N 162 GLU CD OE1 doub N N 163 GLU CD OE2 sing N N 164 GLU OE2 HE2 sing N N 165 GLU OXT HXT sing N N 166 GLY N CA sing N N 167 GLY N H sing N N 168 GLY N H2 sing N N 169 GLY CA C sing N N 170 GLY CA HA2 sing N N 171 GLY CA HA3 sing N N 172 GLY C O doub N N 173 GLY C OXT sing N N 174 GLY OXT HXT sing N N 175 HIS N CA sing N N 176 HIS N H sing N N 177 HIS N H2 sing N N 178 HIS CA C sing N N 179 HIS CA CB sing N N 180 HIS CA HA sing N N 181 HIS C O doub N N 182 HIS C OXT sing N N 183 HIS CB CG sing N N 184 HIS CB HB2 sing N N 185 HIS CB HB3 sing N N 186 HIS CG ND1 sing Y N 187 HIS CG CD2 doub Y N 188 HIS ND1 CE1 doub Y N 189 HIS ND1 HD1 sing N N 190 HIS CD2 NE2 sing Y N 191 HIS CD2 HD2 sing N N 192 HIS CE1 NE2 sing Y N 193 HIS CE1 HE1 sing N N 194 HIS NE2 HE2 sing N N 195 HIS OXT HXT sing N N 196 HOH O H1 sing N N 197 HOH O H2 sing N N 198 ILE N CA sing N N 199 ILE N H sing N N 200 ILE N H2 sing N N 201 ILE CA C sing N N 202 ILE CA CB sing N N 203 ILE CA HA sing N N 204 ILE C O doub N N 205 ILE C OXT sing N N 206 ILE CB CG1 sing N N 207 ILE CB CG2 sing N N 208 ILE CB HB sing N N 209 ILE CG1 CD1 sing N N 210 ILE CG1 HG12 sing N N 211 ILE CG1 HG13 sing N N 212 ILE CG2 HG21 sing N N 213 ILE CG2 HG22 sing N N 214 ILE CG2 HG23 sing N N 215 ILE CD1 HD11 sing N N 216 ILE CD1 HD12 sing N N 217 ILE CD1 HD13 sing N N 218 ILE OXT HXT sing N N 219 LEU N CA sing N N 220 LEU N H sing N N 221 LEU N H2 sing N N 222 LEU CA C sing N N 223 LEU CA CB sing N N 224 LEU CA HA sing N N 225 LEU C O doub N N 226 LEU C OXT sing N N 227 LEU CB CG sing N N 228 LEU CB HB2 sing N N 229 LEU CB HB3 sing N N 230 LEU CG CD1 sing N N 231 LEU CG CD2 sing N N 232 LEU CG HG sing N N 233 LEU CD1 HD11 sing N N 234 LEU CD1 HD12 sing N N 235 LEU CD1 HD13 sing N N 236 LEU CD2 HD21 sing N N 237 LEU CD2 HD22 sing N N 238 LEU CD2 HD23 sing N N 239 LEU OXT HXT sing N N 240 LYS N CA sing N N 241 LYS N H sing N N 242 LYS N H2 sing N N 243 LYS CA C sing N N 244 LYS CA CB sing N N 245 LYS CA HA sing N N 246 LYS C O doub N N 247 LYS C OXT sing N N 248 LYS CB CG sing N N 249 LYS CB HB2 sing N N 250 LYS CB HB3 sing N N 251 LYS CG CD sing N N 252 LYS CG HG2 sing N N 253 LYS CG HG3 sing N N 254 LYS CD CE sing N N 255 LYS CD HD2 sing N N 256 LYS CD HD3 sing N N 257 LYS CE NZ sing N N 258 LYS CE HE2 sing N N 259 LYS CE HE3 sing N N 260 LYS NZ HZ1 sing N N 261 LYS NZ HZ2 sing N N 262 LYS NZ HZ3 sing N N 263 LYS OXT HXT sing N N 264 MET N CA sing N N 265 MET N H sing N N 266 MET N H2 sing N N 267 MET CA C sing N N 268 MET CA CB sing N N 269 MET CA HA sing N N 270 MET C O doub N N 271 MET C OXT sing N N 272 MET CB CG sing N N 273 MET CB HB2 sing N N 274 MET CB HB3 sing N N 275 MET CG SD sing N N 276 MET CG HG2 sing N N 277 MET CG HG3 sing N N 278 MET SD CE sing N N 279 MET CE HE1 sing N N 280 MET CE HE2 sing N N 281 MET CE HE3 sing N N 282 MET OXT HXT sing N N 283 PHE N CA sing N N 284 PHE N H sing N N 285 PHE N H2 sing N N 286 PHE CA C sing N N 287 PHE CA CB sing N N 288 PHE CA HA sing N N 289 PHE C O doub N N 290 PHE C OXT sing N N 291 PHE CB CG sing N N 292 PHE CB HB2 sing N N 293 PHE CB HB3 sing N N 294 PHE CG CD1 doub Y N 295 PHE CG CD2 sing Y N 296 PHE CD1 CE1 sing Y N 297 PHE CD1 HD1 sing N N 298 PHE CD2 CE2 doub Y N 299 PHE CD2 HD2 sing N N 300 PHE CE1 CZ doub Y N 301 PHE CE1 HE1 sing N N 302 PHE CE2 CZ sing Y N 303 PHE CE2 HE2 sing N N 304 PHE CZ HZ sing N N 305 PHE OXT HXT sing N N 306 PRO N CA sing N N 307 PRO N CD sing N N 308 PRO N H sing N N 309 PRO CA C sing N N 310 PRO CA CB sing N N 311 PRO CA HA sing N N 312 PRO C O doub N N 313 PRO C OXT sing N N 314 PRO CB CG sing N N 315 PRO CB HB2 sing N N 316 PRO CB HB3 sing N N 317 PRO CG CD sing N N 318 PRO CG HG2 sing N N 319 PRO CG HG3 sing N N 320 PRO CD HD2 sing N N 321 PRO CD HD3 sing N N 322 PRO OXT HXT sing N N 323 SER N CA sing N N 324 SER N H sing N N 325 SER N H2 sing N N 326 SER CA C sing N N 327 SER CA CB sing N N 328 SER CA HA sing N N 329 SER C O doub N N 330 SER C OXT sing N N 331 SER CB OG sing N N 332 SER CB HB2 sing N N 333 SER CB HB3 sing N N 334 SER OG HG sing N N 335 SER OXT HXT sing N N 336 THR N CA sing N N 337 THR N H sing N N 338 THR N H2 sing N N 339 THR CA C sing N N 340 THR CA CB sing N N 341 THR CA HA sing N N 342 THR C O doub N N 343 THR C OXT sing N N 344 THR CB OG1 sing N N 345 THR CB CG2 sing N N 346 THR CB HB sing N N 347 THR OG1 HG1 sing N N 348 THR CG2 HG21 sing N N 349 THR CG2 HG22 sing N N 350 THR CG2 HG23 sing N N 351 THR OXT HXT sing N N 352 TRP N CA sing N N 353 TRP N H sing N N 354 TRP N H2 sing N N 355 TRP CA C sing N N 356 TRP CA CB sing N N 357 TRP CA HA sing N N 358 TRP C O doub N N 359 TRP C OXT sing N N 360 TRP CB CG sing N N 361 TRP CB HB2 sing N N 362 TRP CB HB3 sing N N 363 TRP CG CD1 doub Y N 364 TRP CG CD2 sing Y N 365 TRP CD1 NE1 sing Y N 366 TRP CD1 HD1 sing N N 367 TRP CD2 CE2 doub Y N 368 TRP CD2 CE3 sing Y N 369 TRP NE1 CE2 sing Y N 370 TRP NE1 HE1 sing N N 371 TRP CE2 CZ2 sing Y N 372 TRP CE3 CZ3 doub Y N 373 TRP CE3 HE3 sing N N 374 TRP CZ2 CH2 doub Y N 375 TRP CZ2 HZ2 sing N N 376 TRP CZ3 CH2 sing Y N 377 TRP CZ3 HZ3 sing N N 378 TRP CH2 HH2 sing N N 379 TRP OXT HXT sing N N 380 TYR N CA sing N N 381 TYR N H sing N N 382 TYR N H2 sing N N 383 TYR CA C sing N N 384 TYR CA CB sing N N 385 TYR CA HA sing N N 386 TYR C O doub N N 387 TYR C OXT sing N N 388 TYR CB CG sing N N 389 TYR CB HB2 sing N N 390 TYR CB HB3 sing N N 391 TYR CG CD1 doub Y N 392 TYR CG CD2 sing Y N 393 TYR CD1 CE1 sing Y N 394 TYR CD1 HD1 sing N N 395 TYR CD2 CE2 doub Y N 396 TYR CD2 HD2 sing N N 397 TYR CE1 CZ doub Y N 398 TYR CE1 HE1 sing N N 399 TYR CE2 CZ sing Y N 400 TYR CE2 HE2 sing N N 401 TYR CZ OH sing N N 402 TYR OH HH sing N N 403 TYR OXT HXT sing N N 404 VAL N CA sing N N 405 VAL N H sing N N 406 VAL N H2 sing N N 407 VAL CA C sing N N 408 VAL CA CB sing N N 409 VAL CA HA sing N N 410 VAL C O doub N N 411 VAL C OXT sing N N 412 VAL CB CG1 sing N N 413 VAL CB CG2 sing N N 414 VAL CB HB sing N N 415 VAL CG1 HG11 sing N N 416 VAL CG1 HG12 sing N N 417 VAL CG1 HG13 sing N N 418 VAL CG2 HG21 sing N N 419 VAL CG2 HG22 sing N N 420 VAL CG2 HG23 sing N N 421 VAL OXT HXT sing N N 422 # _pdbx_audit_support.funding_organization 'National Center for Research and Development (Poland)' _pdbx_audit_support.country Poland _pdbx_audit_support.grant_number POIR.01.01.01-00-0931/19 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6CD9 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9QDY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.026271 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.009757 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024830 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019611 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C F N O S # loop_ #