HEADER HYDROLASE 17-MAR-25 9QHZ TITLE CRYSTAL STRUCTURE OF HUMAN PMS2 N-TERMINAL DOMAIN - ATPGAMMAS COMPND MOL_ID: 1; COMPND 2 MOLECULE: MISMATCH REPAIR ENDONUCLEASE PMS2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DNA MISMATCH REPAIR PROTEIN PMS2,PMS1 PROTEIN HOMOLOG 2; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: N-TERMINAL DOMAIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PMS2, PMSL2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS MUTLALPHA, DNA REPAIR, ATPASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.M.BANDERA,M.THOMSEN REVDAT 1 30-SEP-26 9QHZ 0 JRNL AUTH A.M.BANDERA,M.THOMSEN JRNL TITL CRYSTAL STRUCTURE OF HUMAN PMS2 N-TERMINAL DOMAIN - JRNL TITL 2 ATPGAMMAS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 65.0 REMARK 3 NUMBER OF REFLECTIONS : 20257 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.971 REMARK 3 FREE R VALUE TEST SET COUNT : 1007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.36 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.42 REMARK 3 REFLECTION IN BIN (WORKING SET) : 91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 4.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.2750 REMARK 3 BIN FREE R VALUE SET COUNT : 3 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4660 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 81 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -22.50100 REMARK 3 B22 (A**2) : 21.97500 REMARK 3 B33 (A**2) : 0.52600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.274 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.068 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.145 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.797 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.873 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4610 ; 0.003 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 4233 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6265 ; 0.972 ; 1.798 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9661 ; 0.424 ; 1.726 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 597 ; 6.182 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 23 ; 0.138 ; 1.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 658 ;11.240 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 745 ; 0.046 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5398 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1034 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 770 ; 0.156 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 66 ; 0.122 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2259 ; 0.152 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 132 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2403 ; 1.730 ; 6.528 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2403 ; 1.730 ; 6.528 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2995 ; 3.069 ;11.746 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2996 ; 3.069 ;11.746 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2207 ; 1.398 ; 6.634 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2197 ; 1.387 ; 6.620 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3270 ; 2.418 ;12.232 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3259 ; 2.418 ;12.204 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 32 A 364 NULL REMARK 3 1 B 32 B 364 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.6016 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : -K, -H, -L REMARK 3 TWIN FRACTION : 0.3984 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9QHZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-MAR-25. REMARK 100 THE DEPOSITION ID IS D_1292146321. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JAN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20258 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.360 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09400 REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 50.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.11800 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LICL 2.3 M NA K PHOSPHATE REMARK 280 PH=6.25, PH 6.25, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.83850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.93650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.95500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.93650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.83850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.95500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ARG A 3 REMARK 465 ALA A 4 REMARK 465 GLU A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 THR A 9 REMARK 465 GLU A 10 REMARK 465 PRO A 11 REMARK 465 ALA A 12 REMARK 465 LYS A 13 REMARK 465 ALA A 14 REMARK 465 ILE A 15 REMARK 465 LYS A 16 REMARK 465 PRO A 17 REMARK 465 ILE A 18 REMARK 465 ASP A 19 REMARK 465 ARG A 20 REMARK 465 LYS A 21 REMARK 465 SER A 22 REMARK 465 VAL A 23 REMARK 465 HIS A 24 REMARK 465 GLN A 25 REMARK 465 ILE A 26 REMARK 465 CYS A 27 REMARK 465 SER A 28 REMARK 465 GLY A 29 REMARK 465 GLN A 30 REMARK 465 VAL A 31 REMARK 465 LYS A 86 REMARK 465 HIS A 87 REMARK 465 HIS A 88 REMARK 465 THR A 89 REMARK 465 SER A 90 REMARK 465 LYS A 91 REMARK 465 ILE A 92 REMARK 465 GLN A 93 REMARK 465 GLU A 94 REMARK 465 PHE A 95 REMARK 465 ALA A 96 REMARK 465 ASP A 97 REMARK 465 LEU A 98 REMARK 465 THR A 99 REMARK 465 GLN A 100 REMARK 465 VAL A 101 REMARK 465 GLU A 102 REMARK 465 THR A 103 REMARK 465 PHE A 104 REMARK 465 GLY A 105 REMARK 465 PHE A 106 REMARK 465 ARG A 107 REMARK 465 GLY A 108 REMARK 465 VAL A 332 REMARK 465 ASP A 333 REMARK 465 ILE A 334 REMARK 465 ASN A 335 REMARK 465 VAL A 336 REMARK 465 THR A 337 REMARK 465 PRO A 338 REMARK 465 ASP A 339 REMARK 465 LYS A 340 REMARK 465 ARG A 341 REMARK 465 GLN A 342 REMARK 465 ILE A 343 REMARK 465 SER A 365 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 ARG B 3 REMARK 465 ALA B 4 REMARK 465 GLU B 5 REMARK 465 SER B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 THR B 9 REMARK 465 GLU B 10 REMARK 465 PRO B 11 REMARK 465 ALA B 12 REMARK 465 LYS B 13 REMARK 465 ALA B 14 REMARK 465 ILE B 15 REMARK 465 LYS B 16 REMARK 465 PRO B 17 REMARK 465 ILE B 18 REMARK 465 ASP B 19 REMARK 465 ARG B 20 REMARK 465 LYS B 21 REMARK 465 SER B 22 REMARK 465 VAL B 23 REMARK 465 HIS B 24 REMARK 465 GLN B 25 REMARK 465 ILE B 26 REMARK 465 CYS B 27 REMARK 465 SER B 28 REMARK 465 GLY B 29 REMARK 465 GLN B 30 REMARK 465 VAL B 31 REMARK 465 HIS B 87 REMARK 465 HIS B 88 REMARK 465 THR B 89 REMARK 465 SER B 90 REMARK 465 LYS B 91 REMARK 465 ILE B 92 REMARK 465 GLN B 93 REMARK 465 GLU B 94 REMARK 465 PHE B 95 REMARK 465 ALA B 96 REMARK 465 ASP B 97 REMARK 465 LEU B 98 REMARK 465 THR B 99 REMARK 465 GLN B 100 REMARK 465 VAL B 101 REMARK 465 GLU B 102 REMARK 465 THR B 103 REMARK 465 PHE B 104 REMARK 465 GLY B 105 REMARK 465 PHE B 106 REMARK 465 ARG B 107 REMARK 465 GLY B 108 REMARK 465 ASN B 335 REMARK 465 VAL B 336 REMARK 465 THR B 337 REMARK 465 PRO B 338 REMARK 465 ASP B 339 REMARK 465 LYS B 340 REMARK 465 ARG B 341 REMARK 465 GLN B 342 REMARK 465 SER B 365 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 40 CD CE NZ REMARK 480 ILE A 54 CD1 REMARK 480 ASP A 55 CG OD1 OD2 REMARK 480 ASP A 64 CG OD1 OD2 REMARK 480 GLU A 78 CG CD OE1 OE2 REMARK 480 LEU A 85 CG CD1 CD2 REMARK 480 GLU A 109 CG CD OE1 OE2 REMARK 480 LYS A 130 CG CD CE NZ REMARK 480 ILE A 143 CD1 REMARK 480 ILE A 144 CD1 REMARK 480 LYS A 146 CG CD CE NZ REMARK 480 GLN A 160 CG CD OE1 NE2 REMARK 480 ARG A 169 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 172 CG CD OE1 OE2 REMARK 480 LYS A 178 CD CE NZ REMARK 480 LYS A 179 CD CE NZ REMARK 480 LYS A 183 CD CE NZ REMARK 480 VAL A 187 CG1 REMARK 480 LEU A 188 CD2 REMARK 480 TYR A 191 CZ OH REMARK 480 LYS A 210 CD CE NZ REMARK 480 ILE A 223 CD1 REMARK 480 GLU A 225 CD OE1 OE2 REMARK 480 GLN A 233 CD OE1 NE2 REMARK 480 GLU A 253 CG CD OE1 OE2 REMARK 480 CYS A 259 SG REMARK 480 LEU A 263 CG CD1 CD2 REMARK 480 ILE A 269 CD1 REMARK 480 ILE A 292 CD1 REMARK 480 ARG A 295 NE CZ NH1 NH2 REMARK 480 LYS A 301 CG CD CE NZ REMARK 480 VAL A 302 CG1 CG2 REMARK 480 LEU A 305 CG CD1 CD2 REMARK 480 VAL A 309 CG1 CG2 REMARK 480 MET A 312 CG SD CE REMARK 480 ARG A 315 CG CD NE CZ NH1 NH2 REMARK 480 LEU A 323 CG CD1 CD2 REMARK 480 ILE A 325 CD1 REMARK 480 ASP A 328 CG OD1 OD2 REMARK 480 GLU A 330 CG CD OE1 OE2 REMARK 480 LEU A 344 CG CD1 CD2 REMARK 480 GLN A 346 CG CD OE1 NE2 REMARK 480 LEU A 352 CG CD1 CD2 REMARK 480 VAL A 354 CG1 CG2 REMARK 480 SER A 358 OG REMARK 480 ILE A 360 CD1 REMARK 480 LYS B 40 CD CE NZ REMARK 480 GLU B 44 CD OE1 OE2 REMARK 480 LYS B 57 CG CD CE NZ REMARK 480 LEU B 65 CG CD1 CD2 REMARK 480 GLU B 78 CD OE1 OE2 REMARK 480 LEU B 85 CG CD1 CD2 REMARK 480 LYS B 130 CG CD CE NZ REMARK 480 LYS B 142 CD CE NZ REMARK 480 ILE B 144 CD1 REMARK 480 LYS B 146 CE NZ REMARK 480 GLN B 160 CD OE1 NE2 REMARK 480 LYS B 179 CG CD CE NZ REMARK 480 LYS B 183 CD CE NZ REMARK 480 GLN B 212 CG CD OE1 NE2 REMARK 480 LYS B 224 CE NZ REMARK 480 GLU B 225 CG CD OE1 OE2 REMARK 480 LYS B 234 CG CD CE NZ REMARK 480 ILE B 240 CD1 REMARK 480 GLU B 253 CG CD OE1 OE2 REMARK 480 CYS B 259 SG REMARK 480 LEU B 263 CG CD1 CD2 REMARK 480 HIS B 264 CG ND1 CD2 CE1 NE2 REMARK 480 ILE B 269 CD1 REMARK 480 ILE B 273 CD1 REMARK 480 ILE B 292 CD1 REMARK 480 LYS B 301 CE NZ REMARK 480 LEU B 323 CD2 REMARK 480 ASP B 333 CG OD1 OD2 REMARK 480 ILE B 334 CG1 CG2 CD1 REMARK 480 ILE B 343 CG1 CG2 CD1 REMARK 480 LEU B 344 CG CD1 CD2 REMARK 480 GLU B 347 CG CD OE1 OE2 REMARK 480 GLU B 348 CD OE1 OE2 REMARK 480 LYS B 349 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 161 67.97 60.70 REMARK 500 ASN A 176 40.26 -101.31 REMARK 500 VAL A 280 -53.37 -126.94 REMARK 500 ARG A 287 76.36 -110.71 REMARK 500 THR B 84 56.73 -119.46 REMARK 500 ASN B 176 41.38 -101.05 REMARK 500 VAL B 280 -53.62 -127.94 REMARK 500 ARG B 287 73.49 -105.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 45 OD1 REMARK 620 2 AGS A 401 O3G 152.1 REMARK 620 3 AGS A 401 O1B 108.4 99.5 REMARK 620 4 AGS A 401 O1A 89.1 88.8 97.4 REMARK 620 5 HOH A 501 O 74.2 78.0 176.5 80.2 REMARK 620 6 HOH A 502 O 79.4 92.6 104.0 157.9 78.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 45 OD1 REMARK 620 2 AGS B 401 O3G 152.6 REMARK 620 3 AGS B 401 O1B 112.6 90.9 REMARK 620 4 AGS B 401 O1A 104.4 87.5 92.8 REMARK 620 5 HOH B 501 O 72.7 104.2 70.6 159.5 REMARK 620 6 HOH B 503 O 76.6 78.1 166.9 93.8 105.0 REMARK 620 N 1 2 3 4 5 DBREF 9QHZ A 1 365 UNP P54278 PMS2_HUMAN 1 365 DBREF 9QHZ B 1 365 UNP P54278 PMS2_HUMAN 1 365 SEQADV 9QHZ GLY A 0 UNP P54278 EXPRESSION TAG SEQADV 9QHZ GLY B 0 UNP P54278 EXPRESSION TAG SEQRES 1 A 366 GLY MET GLU ARG ALA GLU SER SER SER THR GLU PRO ALA SEQRES 2 A 366 LYS ALA ILE LYS PRO ILE ASP ARG LYS SER VAL HIS GLN SEQRES 3 A 366 ILE CYS SER GLY GLN VAL VAL LEU SER LEU SER THR ALA SEQRES 4 A 366 VAL LYS GLU LEU VAL GLU ASN SER LEU ASP ALA GLY ALA SEQRES 5 A 366 THR ASN ILE ASP LEU LYS LEU LYS ASP TYR GLY VAL ASP SEQRES 6 A 366 LEU ILE GLU VAL SER ASP ASN GLY CYS GLY VAL GLU GLU SEQRES 7 A 366 GLU ASN PHE GLU GLY LEU THR LEU LYS HIS HIS THR SER SEQRES 8 A 366 LYS ILE GLN GLU PHE ALA ASP LEU THR GLN VAL GLU THR SEQRES 9 A 366 PHE GLY PHE ARG GLY GLU ALA LEU SER SER LEU CYS ALA SEQRES 10 A 366 LEU SER ASP VAL THR ILE SER THR CYS HIS ALA SER ALA SEQRES 11 A 366 LYS VAL GLY THR ARG LEU MET PHE ASP HIS ASN GLY LYS SEQRES 12 A 366 ILE ILE GLN LYS THR PRO TYR PRO ARG PRO ARG GLY THR SEQRES 13 A 366 THR VAL SER VAL GLN GLN LEU PHE SER THR LEU PRO VAL SEQRES 14 A 366 ARG HIS LYS GLU PHE GLN ARG ASN ILE LYS LYS GLU TYR SEQRES 15 A 366 ALA LYS MET VAL GLN VAL LEU HIS ALA TYR CYS ILE ILE SEQRES 16 A 366 SER ALA GLY ILE ARG VAL SER CYS THR ASN GLN LEU GLY SEQRES 17 A 366 GLN GLY LYS ARG GLN PRO VAL VAL CYS THR GLY GLY SER SEQRES 18 A 366 PRO SER ILE LYS GLU ASN ILE GLY SER VAL PHE GLY GLN SEQRES 19 A 366 LYS GLN LEU GLN SER LEU ILE PRO PHE VAL GLN LEU PRO SEQRES 20 A 366 PRO SER ASP SER VAL CYS GLU GLU TYR GLY LEU SER CYS SEQRES 21 A 366 SER ASP ALA LEU HIS ASN LEU PHE TYR ILE SER GLY PHE SEQRES 22 A 366 ILE SER GLN CYS THR HIS GLY VAL GLY ARG SER SER THR SEQRES 23 A 366 ASP ARG GLN PHE PHE PHE ILE ASN ARG ARG PRO CYS ASP SEQRES 24 A 366 PRO ALA LYS VAL CYS ARG LEU VAL ASN GLU VAL TYR HIS SEQRES 25 A 366 MET TYR ASN ARG HIS GLN TYR PRO PHE VAL VAL LEU ASN SEQRES 26 A 366 ILE SER VAL ASP SER GLU CYS VAL ASP ILE ASN VAL THR SEQRES 27 A 366 PRO ASP LYS ARG GLN ILE LEU LEU GLN GLU GLU LYS LEU SEQRES 28 A 366 LEU LEU ALA VAL LEU LYS THR SER LEU ILE GLY MET PHE SEQRES 29 A 366 ASP SER SEQRES 1 B 366 GLY MET GLU ARG ALA GLU SER SER SER THR GLU PRO ALA SEQRES 2 B 366 LYS ALA ILE LYS PRO ILE ASP ARG LYS SER VAL HIS GLN SEQRES 3 B 366 ILE CYS SER GLY GLN VAL VAL LEU SER LEU SER THR ALA SEQRES 4 B 366 VAL LYS GLU LEU VAL GLU ASN SER LEU ASP ALA GLY ALA SEQRES 5 B 366 THR ASN ILE ASP LEU LYS LEU LYS ASP TYR GLY VAL ASP SEQRES 6 B 366 LEU ILE GLU VAL SER ASP ASN GLY CYS GLY VAL GLU GLU SEQRES 7 B 366 GLU ASN PHE GLU GLY LEU THR LEU LYS HIS HIS THR SER SEQRES 8 B 366 LYS ILE GLN GLU PHE ALA ASP LEU THR GLN VAL GLU THR SEQRES 9 B 366 PHE GLY PHE ARG GLY GLU ALA LEU SER SER LEU CYS ALA SEQRES 10 B 366 LEU SER ASP VAL THR ILE SER THR CYS HIS ALA SER ALA SEQRES 11 B 366 LYS VAL GLY THR ARG LEU MET PHE ASP HIS ASN GLY LYS SEQRES 12 B 366 ILE ILE GLN LYS THR PRO TYR PRO ARG PRO ARG GLY THR SEQRES 13 B 366 THR VAL SER VAL GLN GLN LEU PHE SER THR LEU PRO VAL SEQRES 14 B 366 ARG HIS LYS GLU PHE GLN ARG ASN ILE LYS LYS GLU TYR SEQRES 15 B 366 ALA LYS MET VAL GLN VAL LEU HIS ALA TYR CYS ILE ILE SEQRES 16 B 366 SER ALA GLY ILE ARG VAL SER CYS THR ASN GLN LEU GLY SEQRES 17 B 366 GLN GLY LYS ARG GLN PRO VAL VAL CYS THR GLY GLY SER SEQRES 18 B 366 PRO SER ILE LYS GLU ASN ILE GLY SER VAL PHE GLY GLN SEQRES 19 B 366 LYS GLN LEU GLN SER LEU ILE PRO PHE VAL GLN LEU PRO SEQRES 20 B 366 PRO SER ASP SER VAL CYS GLU GLU TYR GLY LEU SER CYS SEQRES 21 B 366 SER ASP ALA LEU HIS ASN LEU PHE TYR ILE SER GLY PHE SEQRES 22 B 366 ILE SER GLN CYS THR HIS GLY VAL GLY ARG SER SER THR SEQRES 23 B 366 ASP ARG GLN PHE PHE PHE ILE ASN ARG ARG PRO CYS ASP SEQRES 24 B 366 PRO ALA LYS VAL CYS ARG LEU VAL ASN GLU VAL TYR HIS SEQRES 25 B 366 MET TYR ASN ARG HIS GLN TYR PRO PHE VAL VAL LEU ASN SEQRES 26 B 366 ILE SER VAL ASP SER GLU CYS VAL ASP ILE ASN VAL THR SEQRES 27 B 366 PRO ASP LYS ARG GLN ILE LEU LEU GLN GLU GLU LYS LEU SEQRES 28 B 366 LEU LEU ALA VAL LEU LYS THR SER LEU ILE GLY MET PHE SEQRES 29 B 366 ASP SER HET AGS A 401 31 HET MG A 402 1 HET PO4 A 403 5 HET AGS B 401 31 HET MG B 402 1 HET PO4 B 403 5 HETNAM AGS PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER HETNAM MG MAGNESIUM ION HETNAM PO4 PHOSPHATE ION HETSYN AGS ATP-GAMMA-S; ADENOSINE 5'-(3-THIOTRIPHOSPHATE); HETSYN 2 AGS ADENOSINE 5'-(GAMMA-THIOTRIPHOSPHATE); ADENOSINE-5'- HETSYN 3 AGS DIPHOSPHATE MONOTHIOPHOSPHATE FORMUL 3 AGS 2(C10 H16 N5 O12 P3 S) FORMUL 4 MG 2(MG 2+) FORMUL 5 PO4 2(O4 P 3-) FORMUL 9 HOH *81(H2 O) HELIX 1 AA1 SER A 34 ALA A 49 1 16 HELIX 2 AA2 GLU A 76 THR A 84 5 9 HELIX 3 AA3 ALA A 110 SER A 118 1 9 HELIX 4 AA4 LEU A 166 ASN A 176 1 11 HELIX 5 AA5 ASN A 176 SER A 195 1 20 HELIX 6 AA6 SER A 222 GLY A 232 1 11 HELIX 7 AA7 GLY A 232 GLN A 237 1 6 HELIX 8 AA8 SER A 248 GLY A 256 1 9 HELIX 9 AA9 SER A 258 HIS A 264 1 7 HELIX 10 AB1 PRO A 299 ASN A 314 1 16 HELIX 11 AB2 GLU A 347 ASP A 364 1 18 HELIX 12 AB3 SER B 34 ALA B 49 1 16 HELIX 13 AB4 GLU B 76 THR B 84 5 9 HELIX 14 AB5 ALA B 110 SER B 118 1 9 HELIX 15 AB6 LEU B 166 ASN B 176 1 11 HELIX 16 AB7 ASN B 176 SER B 195 1 20 HELIX 17 AB8 SER B 222 GLY B 232 1 11 HELIX 18 AB9 GLY B 232 SER B 238 1 7 HELIX 19 AC1 SER B 248 GLY B 256 1 9 HELIX 20 AC2 SER B 258 HIS B 264 1 7 HELIX 21 AC3 PRO B 299 ASN B 314 1 16 HELIX 22 AC4 GLU B 347 ASP B 364 1 18 SHEET 1 AA1 8 ILE A 143 PRO A 148 0 SHEET 2 AA1 8 THR A 133 PHE A 137 -1 N MET A 136 O ILE A 144 SHEET 3 AA1 8 ASP A 119 CYS A 125 -1 N ILE A 122 O LEU A 135 SHEET 4 AA1 8 GLY A 154 GLN A 160 -1 O SER A 158 N THR A 121 SHEET 5 AA1 8 LEU A 65 ASP A 70 -1 N ASP A 70 O THR A 155 SHEET 6 AA1 8 ASN A 53 LYS A 59 -1 N LYS A 57 O GLU A 67 SHEET 7 AA1 8 ARG A 199 GLN A 205 1 O ARG A 199 N ILE A 54 SHEET 8 AA1 8 GLN A 212 CYS A 216 -1 O GLN A 212 N ASN A 204 SHEET 1 AA2 5 LEU A 239 PRO A 241 0 SHEET 2 AA2 5 TYR A 268 SER A 274 -1 O ILE A 273 N ILE A 240 SHEET 3 AA2 5 VAL A 321 SER A 326 -1 O SER A 326 N TYR A 268 SHEET 4 AA2 5 GLN A 288 ILE A 292 1 N PHE A 289 O VAL A 321 SHEET 5 AA2 5 PRO A 296 CYS A 297 -1 O CYS A 297 N PHE A 290 SHEET 1 AA3 8 ILE B 143 PRO B 148 0 SHEET 2 AA3 8 THR B 133 PHE B 137 -1 N MET B 136 O ILE B 144 SHEET 3 AA3 8 ASP B 119 CYS B 125 -1 N ILE B 122 O LEU B 135 SHEET 4 AA3 8 GLY B 154 GLN B 160 -1 O SER B 158 N THR B 121 SHEET 5 AA3 8 LEU B 65 ASP B 70 -1 N ASP B 70 O THR B 155 SHEET 6 AA3 8 ASN B 53 LYS B 59 -1 N LYS B 57 O GLU B 67 SHEET 7 AA3 8 ARG B 199 GLN B 205 1 O ARG B 199 N ILE B 54 SHEET 8 AA3 8 ARG B 211 CYS B 216 -1 O GLN B 212 N ASN B 204 SHEET 1 AA4 5 LEU B 239 PRO B 241 0 SHEET 2 AA4 5 TYR B 268 SER B 274 -1 O ILE B 273 N ILE B 240 SHEET 3 AA4 5 VAL B 321 SER B 326 -1 O SER B 326 N TYR B 268 SHEET 4 AA4 5 GLN B 288 ILE B 292 1 N PHE B 289 O VAL B 321 SHEET 5 AA4 5 PRO B 296 CYS B 297 -1 O CYS B 297 N PHE B 290 SHEET 1 AA5 2 VAL B 332 ASP B 333 0 SHEET 2 AA5 2 LEU B 344 LEU B 345 -1 O LEU B 344 N ASP B 333 LINK OD1 ASN A 45 MG MG A 402 1555 1555 1.99 LINK O3G AGS A 401 MG MG A 402 1555 1555 1.99 LINK O1B AGS A 401 MG MG A 402 1555 1555 1.99 LINK O1A AGS A 401 MG MG A 402 1555 1555 1.99 LINK MG MG A 402 O HOH A 501 1555 1555 1.99 LINK MG MG A 402 O HOH A 502 1555 1555 1.99 LINK OD1 ASN B 45 MG MG B 402 1555 1555 2.00 LINK O3G AGS B 401 MG MG B 402 1555 1555 1.99 LINK O1B AGS B 401 MG MG B 402 1555 1555 1.99 LINK O1A AGS B 401 MG MG B 402 1555 1555 2.00 LINK MG MG B 402 O HOH B 501 1555 1555 1.99 LINK MG MG B 402 O HOH B 503 1555 1555 1.99 CRYST1 73.677 73.910 135.873 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013573 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013530 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007360 0.00000 CONECT 103 4703 CONECT 2414 4740 CONECT 4672 4673 4674 4675 4679 CONECT 4673 4672 CONECT 4674 4672 CONECT 4675 4672 4703 CONECT 4676 4677 4678 4679 4683 CONECT 4677 4676 4703 CONECT 4678 4676 CONECT 4679 4672 4676 CONECT 4680 4681 4682 4683 4684 CONECT 4681 4680 4703 CONECT 4682 4680 CONECT 4683 4676 4680 CONECT 4684 4680 4685 CONECT 4685 4684 4686 CONECT 4686 4685 4687 4688 CONECT 4687 4686 4692 CONECT 4688 4686 4689 4690 CONECT 4689 4688 CONECT 4690 4688 4691 4692 CONECT 4691 4690 CONECT 4692 4687 4690 4693 CONECT 4693 4692 4694 4702 CONECT 4694 4693 4695 CONECT 4695 4694 4696 CONECT 4696 4695 4697 4702 CONECT 4697 4696 4698 4699 CONECT 4698 4697 CONECT 4699 4697 4700 CONECT 4700 4699 4701 CONECT 4701 4700 4702 CONECT 4702 4693 4696 4701 CONECT 4703 103 4675 4677 4681 CONECT 4703 4746 4747 CONECT 4704 4705 4706 4707 4708 CONECT 4705 4704 CONECT 4706 4704 CONECT 4707 4704 CONECT 4708 4704 CONECT 4709 4710 4711 4712 4716 CONECT 4710 4709 CONECT 4711 4709 CONECT 4712 4709 4740 CONECT 4713 4714 4715 4716 4720 CONECT 4714 4713 4740 CONECT 4715 4713 CONECT 4716 4709 4713 CONECT 4717 4718 4719 4720 4721 CONECT 4718 4717 4740 CONECT 4719 4717 CONECT 4720 4713 4717 CONECT 4721 4717 4722 CONECT 4722 4721 4723 CONECT 4723 4722 4724 4725 CONECT 4724 4723 4729 CONECT 4725 4723 4726 4727 CONECT 4726 4725 CONECT 4727 4725 4728 4729 CONECT 4728 4727 CONECT 4729 4724 4727 4730 CONECT 4730 4729 4731 4739 CONECT 4731 4730 4732 CONECT 4732 4731 4733 CONECT 4733 4732 4734 4739 CONECT 4734 4733 4735 4736 CONECT 4735 4734 CONECT 4736 4734 4737 CONECT 4737 4736 4738 CONECT 4738 4737 4739 CONECT 4739 4730 4733 4738 CONECT 4740 2414 4712 4714 4718 CONECT 4740 4784 4786 CONECT 4741 4742 4743 4744 4745 CONECT 4742 4741 CONECT 4743 4741 CONECT 4744 4741 CONECT 4745 4741 CONECT 4746 4703 CONECT 4747 4703 CONECT 4784 4740 CONECT 4786 4740 MASTER 534 0 6 22 28 0 0 6 4815 2 82 58 END