HEADER HYDROLASE 17-MAR-25 9QI4 TITLE CRYSTAL STRUCTURE OF HUMAN PMS2 N-TERMINAL DOMAIN WITH AMP-PNP BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: MISMATCH REPAIR ENDONUCLEASE PMS2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DNA MISMATCH REPAIR PROTEIN PMS2,PMS1 PROTEIN HOMOLOG 2; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: N-TERMINAL DOMAIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PMS2, PMSL2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS MUTLALPHA, DNA REPAIR, ATPASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.M.BANDERA,M.THOMSEN REVDAT 1 30-SEP-26 9QI4 0 JRNL AUTH A.M.BANDERA,M.THOMSEN JRNL TITL CRYSTAL STRUCTURE OF HUMAN PMS2 N-TERMINAL DOMAIN WITH JRNL TITL 2 AMP-PNP BOUND JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 76.2 REMARK 3 NUMBER OF REFLECTIONS : 30260 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.066 REMARK 3 FREE R VALUE TEST SET COUNT : 1533 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.19 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.25 REMARK 3 REFLECTION IN BIN (WORKING SET) : 125 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 4.66 REMARK 3 BIN R VALUE (WORKING SET) : 0.2760 REMARK 3 BIN FREE R VALUE SET COUNT : 10 REMARK 3 BIN FREE R VALUE : 0.2620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4797 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 155 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.50400 REMARK 3 B22 (A**2) : -4.36200 REMARK 3 B33 (A**2) : 5.86600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.080 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.052 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.144 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.522 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4792 ; 0.003 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 4462 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6507 ; 1.027 ; 1.803 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10213 ; 0.446 ; 1.726 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 612 ; 5.728 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 26 ; 0.106 ; 1.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 723 ;12.527 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 776 ; 0.048 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5573 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1069 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 728 ; 0.163 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 52 ; 0.130 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2301 ; 0.155 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 159 ; 0.066 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2466 ; 1.569 ; 6.119 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2466 ; 1.569 ; 6.119 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3072 ; 2.876 ;11.002 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3073 ; 2.876 ;11.002 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2326 ; 1.260 ; 6.221 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2318 ; 1.259 ; 6.203 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3435 ; 2.306 ;11.472 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3424 ; 2.306 ;11.435 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 32 A 364 NULL REMARK 3 1 B 32 B 364 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.8948 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : -K, -H, -L REMARK 3 TWIN FRACTION : 0.1052 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9QI4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-MAR-25. REMARK 100 THE DEPOSITION ID IS D_1292146317. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30261 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.190 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 8.180 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 68.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.39600 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 M LICL 2.10 M NA K PHOSPHATE REMARK 280 PH=6.25, PH 6.25, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.20350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.05600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.34000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 68.05600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.20350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.34000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ARG A 3 REMARK 465 ALA A 4 REMARK 465 GLU A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 THR A 9 REMARK 465 GLU A 10 REMARK 465 PRO A 11 REMARK 465 ALA A 12 REMARK 465 LYS A 13 REMARK 465 ALA A 14 REMARK 465 ILE A 15 REMARK 465 LYS A 16 REMARK 465 PRO A 17 REMARK 465 ILE A 18 REMARK 465 ASP A 19 REMARK 465 ARG A 20 REMARK 465 LYS A 21 REMARK 465 SER A 22 REMARK 465 VAL A 23 REMARK 465 HIS A 24 REMARK 465 GLN A 25 REMARK 465 ILE A 26 REMARK 465 CYS A 27 REMARK 465 SER A 28 REMARK 465 GLY A 29 REMARK 465 GLN A 30 REMARK 465 THR A 89 REMARK 465 SER A 90 REMARK 465 LYS A 91 REMARK 465 ILE A 92 REMARK 465 GLN A 93 REMARK 465 GLU A 94 REMARK 465 PHE A 95 REMARK 465 ALA A 96 REMARK 465 ASP A 97 REMARK 465 LEU A 98 REMARK 465 THR A 99 REMARK 465 GLN A 100 REMARK 465 VAL A 101 REMARK 465 GLU A 102 REMARK 465 ASN A 335 REMARK 465 VAL A 336 REMARK 465 THR A 337 REMARK 465 PRO A 338 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 ARG B 3 REMARK 465 ALA B 4 REMARK 465 GLU B 5 REMARK 465 SER B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 THR B 9 REMARK 465 GLU B 10 REMARK 465 PRO B 11 REMARK 465 ALA B 12 REMARK 465 LYS B 13 REMARK 465 ALA B 14 REMARK 465 ILE B 15 REMARK 465 LYS B 16 REMARK 465 PRO B 17 REMARK 465 ILE B 18 REMARK 465 ASP B 19 REMARK 465 ARG B 20 REMARK 465 LYS B 21 REMARK 465 SER B 22 REMARK 465 VAL B 23 REMARK 465 HIS B 24 REMARK 465 GLN B 25 REMARK 465 ILE B 26 REMARK 465 CYS B 27 REMARK 465 SER B 28 REMARK 465 GLY B 29 REMARK 465 GLN B 30 REMARK 465 VAL B 31 REMARK 465 LYS B 86 REMARK 465 HIS B 87 REMARK 465 HIS B 88 REMARK 465 THR B 89 REMARK 465 SER B 90 REMARK 465 LYS B 91 REMARK 465 ILE B 92 REMARK 465 GLN B 93 REMARK 465 GLU B 94 REMARK 465 PHE B 95 REMARK 465 ALA B 96 REMARK 465 ASP B 97 REMARK 465 LEU B 98 REMARK 465 THR B 99 REMARK 465 GLN B 100 REMARK 465 VAL B 101 REMARK 465 GLU B 102 REMARK 465 THR B 103 REMARK 465 PHE B 104 REMARK 465 GLY B 105 REMARK 465 PHE B 106 REMARK 465 ARG B 107 REMARK 465 ILE B 334 REMARK 465 ASN B 335 REMARK 465 VAL B 336 REMARK 465 THR B 337 REMARK 465 PRO B 338 REMARK 465 ASP B 339 REMARK 465 LYS B 340 REMARK 465 ARG B 341 REMARK 465 GLN B 342 REMARK 465 ILE B 343 REMARK 465 SER B 365 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 40 CE NZ REMARK 480 LYS A 57 CD CE NZ REMARK 480 LYS A 86 CG CD CE NZ REMARK 480 HIS A 87 CG ND1 CD2 CE1 NE2 REMARK 480 HIS A 88 CG ND1 CD2 CE1 NE2 REMARK 480 PHE A 106 CG CD1 CD2 CE1 CE2 CZ REMARK 480 LYS A 130 CG CD CE NZ REMARK 480 LYS A 142 CD CE NZ REMARK 480 LYS A 146 CE NZ REMARK 480 LYS A 179 CD CE NZ REMARK 480 LYS A 183 CD CE NZ REMARK 480 LYS A 210 CG CD CE NZ REMARK 480 LYS A 234 CG CD CE NZ REMARK 480 GLN A 237 CG CD OE1 NE2 REMARK 480 GLU A 253 CG CD OE1 OE2 REMARK 480 SER A 283 OG REMARK 480 GLU A 308 CG CD OE1 OE2 REMARK 480 ARG A 315 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 340 CG CD CE NZ REMARK 480 ARG A 341 CG CD NE CZ NH1 NH2 REMARK 480 GLN A 342 CG CD OE1 NE2 REMARK 480 LEU A 344 CG CD1 CD2 REMARK 480 LYS A 349 CD CE NZ REMARK 480 LEU B 33 CD1 CD2 REMARK 480 LYS B 59 CD CE NZ REMARK 480 GLU B 78 CD OE1 OE2 REMARK 480 GLU B 81 CD OE1 OE2 REMARK 480 LYS B 130 CG CD CE NZ REMARK 480 LYS B 142 CG CD CE NZ REMARK 480 LYS B 146 CE NZ REMARK 480 LYS B 171 NZ REMARK 480 GLU B 172 CD OE1 OE2 REMARK 480 LYS B 178 CG CD CE NZ REMARK 480 LYS B 179 CG CD CE NZ REMARK 480 LYS B 183 CD CE NZ REMARK 480 GLN B 208 CD OE1 NE2 REMARK 480 GLU B 225 CD OE1 OE2 REMARK 480 GLN B 233 CD OE1 NE2 REMARK 480 GLN B 237 CD OE1 NE2 REMARK 480 GLU B 253 CG CD OE1 OE2 REMARK 480 GLN B 275 CD OE1 NE2 REMARK 480 LYS B 301 CG CD CE NZ REMARK 480 GLU B 308 CG CD OE1 OE2 REMARK 480 ASP B 333 CG OD1 OD2 REMARK 480 LEU B 344 CG CD1 CD2 REMARK 480 GLN B 346 CG CD OE1 NE2 REMARK 480 GLU B 347 CD OE1 OE2 REMARK 480 GLU B 348 CD OE1 OE2 REMARK 480 LYS B 349 CG CD CE NZ REMARK 480 LYS B 356 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 161 71.54 59.84 REMARK 500 VAL A 214 -60.97 -98.37 REMARK 500 HIS A 264 58.09 -95.14 REMARK 500 THR A 285 44.95 -93.13 REMARK 500 ARG A 287 67.80 -117.13 REMARK 500 ALA B 129 -66.86 -99.14 REMARK 500 LYS B 130 -1.03 81.96 REMARK 500 GLN B 161 71.85 60.70 REMARK 500 HIS B 264 59.51 -96.60 REMARK 500 THR B 285 39.06 -93.05 REMARK 500 ARG B 287 66.10 -118.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 45 OD1 REMARK 620 2 ANP A 402 O1G 155.2 REMARK 620 3 ANP A 402 O1A 93.7 96.8 REMARK 620 4 ANP A 402 O1B 100.5 102.0 89.2 REMARK 620 5 HOH A 501 O 80.1 76.8 94.5 176.3 REMARK 620 6 HOH A 502 O 76.6 95.4 167.1 84.4 92.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 45 OD1 REMARK 620 2 ANP B 402 O3G 155.5 REMARK 620 3 ANP B 402 O1B 96.8 97.3 REMARK 620 4 ANP B 402 O2A 100.3 99.2 91.8 REMARK 620 5 HOH B 501 O 77.9 86.0 76.3 167.6 REMARK 620 6 HOH B 502 O 77.6 81.4 156.0 112.1 79.7 REMARK 620 N 1 2 3 4 5 DBREF 9QI4 A 1 365 UNP P54278 PMS2_HUMAN 1 365 DBREF 9QI4 B 1 365 UNP P54278 PMS2_HUMAN 1 365 SEQADV 9QI4 GLY A 0 UNP P54278 EXPRESSION TAG SEQADV 9QI4 GLY B 0 UNP P54278 EXPRESSION TAG SEQRES 1 A 366 GLY MET GLU ARG ALA GLU SER SER SER THR GLU PRO ALA SEQRES 2 A 366 LYS ALA ILE LYS PRO ILE ASP ARG LYS SER VAL HIS GLN SEQRES 3 A 366 ILE CYS SER GLY GLN VAL VAL LEU SER LEU SER THR ALA SEQRES 4 A 366 VAL LYS GLU LEU VAL GLU ASN SER LEU ASP ALA GLY ALA SEQRES 5 A 366 THR ASN ILE ASP LEU LYS LEU LYS ASP TYR GLY VAL ASP SEQRES 6 A 366 LEU ILE GLU VAL SER ASP ASN GLY CYS GLY VAL GLU GLU SEQRES 7 A 366 GLU ASN PHE GLU GLY LEU THR LEU LYS HIS HIS THR SER SEQRES 8 A 366 LYS ILE GLN GLU PHE ALA ASP LEU THR GLN VAL GLU THR SEQRES 9 A 366 PHE GLY PHE ARG GLY GLU ALA LEU SER SER LEU CYS ALA SEQRES 10 A 366 LEU SER ASP VAL THR ILE SER THR CYS HIS ALA SER ALA SEQRES 11 A 366 LYS VAL GLY THR ARG LEU MET PHE ASP HIS ASN GLY LYS SEQRES 12 A 366 ILE ILE GLN LYS THR PRO TYR PRO ARG PRO ARG GLY THR SEQRES 13 A 366 THR VAL SER VAL GLN GLN LEU PHE SER THR LEU PRO VAL SEQRES 14 A 366 ARG HIS LYS GLU PHE GLN ARG ASN ILE LYS LYS GLU TYR SEQRES 15 A 366 ALA LYS MET VAL GLN VAL LEU HIS ALA TYR CYS ILE ILE SEQRES 16 A 366 SER ALA GLY ILE ARG VAL SER CYS THR ASN GLN LEU GLY SEQRES 17 A 366 GLN GLY LYS ARG GLN PRO VAL VAL CYS THR GLY GLY SER SEQRES 18 A 366 PRO SER ILE LYS GLU ASN ILE GLY SER VAL PHE GLY GLN SEQRES 19 A 366 LYS GLN LEU GLN SER LEU ILE PRO PHE VAL GLN LEU PRO SEQRES 20 A 366 PRO SER ASP SER VAL CYS GLU GLU TYR GLY LEU SER CYS SEQRES 21 A 366 SER ASP ALA LEU HIS ASN LEU PHE TYR ILE SER GLY PHE SEQRES 22 A 366 ILE SER GLN CYS THR HIS GLY VAL GLY ARG SER SER THR SEQRES 23 A 366 ASP ARG GLN PHE PHE PHE ILE ASN ARG ARG PRO CYS ASP SEQRES 24 A 366 PRO ALA LYS VAL CYS ARG LEU VAL ASN GLU VAL TYR HIS SEQRES 25 A 366 MET TYR ASN ARG HIS GLN TYR PRO PHE VAL VAL LEU ASN SEQRES 26 A 366 ILE SER VAL ASP SER GLU CYS VAL ASP ILE ASN VAL THR SEQRES 27 A 366 PRO ASP LYS ARG GLN ILE LEU LEU GLN GLU GLU LYS LEU SEQRES 28 A 366 LEU LEU ALA VAL LEU LYS THR SER LEU ILE GLY MET PHE SEQRES 29 A 366 ASP SER SEQRES 1 B 366 GLY MET GLU ARG ALA GLU SER SER SER THR GLU PRO ALA SEQRES 2 B 366 LYS ALA ILE LYS PRO ILE ASP ARG LYS SER VAL HIS GLN SEQRES 3 B 366 ILE CYS SER GLY GLN VAL VAL LEU SER LEU SER THR ALA SEQRES 4 B 366 VAL LYS GLU LEU VAL GLU ASN SER LEU ASP ALA GLY ALA SEQRES 5 B 366 THR ASN ILE ASP LEU LYS LEU LYS ASP TYR GLY VAL ASP SEQRES 6 B 366 LEU ILE GLU VAL SER ASP ASN GLY CYS GLY VAL GLU GLU SEQRES 7 B 366 GLU ASN PHE GLU GLY LEU THR LEU LYS HIS HIS THR SER SEQRES 8 B 366 LYS ILE GLN GLU PHE ALA ASP LEU THR GLN VAL GLU THR SEQRES 9 B 366 PHE GLY PHE ARG GLY GLU ALA LEU SER SER LEU CYS ALA SEQRES 10 B 366 LEU SER ASP VAL THR ILE SER THR CYS HIS ALA SER ALA SEQRES 11 B 366 LYS VAL GLY THR ARG LEU MET PHE ASP HIS ASN GLY LYS SEQRES 12 B 366 ILE ILE GLN LYS THR PRO TYR PRO ARG PRO ARG GLY THR SEQRES 13 B 366 THR VAL SER VAL GLN GLN LEU PHE SER THR LEU PRO VAL SEQRES 14 B 366 ARG HIS LYS GLU PHE GLN ARG ASN ILE LYS LYS GLU TYR SEQRES 15 B 366 ALA LYS MET VAL GLN VAL LEU HIS ALA TYR CYS ILE ILE SEQRES 16 B 366 SER ALA GLY ILE ARG VAL SER CYS THR ASN GLN LEU GLY SEQRES 17 B 366 GLN GLY LYS ARG GLN PRO VAL VAL CYS THR GLY GLY SER SEQRES 18 B 366 PRO SER ILE LYS GLU ASN ILE GLY SER VAL PHE GLY GLN SEQRES 19 B 366 LYS GLN LEU GLN SER LEU ILE PRO PHE VAL GLN LEU PRO SEQRES 20 B 366 PRO SER ASP SER VAL CYS GLU GLU TYR GLY LEU SER CYS SEQRES 21 B 366 SER ASP ALA LEU HIS ASN LEU PHE TYR ILE SER GLY PHE SEQRES 22 B 366 ILE SER GLN CYS THR HIS GLY VAL GLY ARG SER SER THR SEQRES 23 B 366 ASP ARG GLN PHE PHE PHE ILE ASN ARG ARG PRO CYS ASP SEQRES 24 B 366 PRO ALA LYS VAL CYS ARG LEU VAL ASN GLU VAL TYR HIS SEQRES 25 B 366 MET TYR ASN ARG HIS GLN TYR PRO PHE VAL VAL LEU ASN SEQRES 26 B 366 ILE SER VAL ASP SER GLU CYS VAL ASP ILE ASN VAL THR SEQRES 27 B 366 PRO ASP LYS ARG GLN ILE LEU LEU GLN GLU GLU LYS LEU SEQRES 28 B 366 LEU LEU ALA VAL LEU LYS THR SER LEU ILE GLY MET PHE SEQRES 29 B 366 ASP SER HET MG A 401 1 HET ANP A 402 31 HET PO4 A 403 5 HET MG B 401 1 HET ANP B 402 31 HET PO4 B 403 5 HETNAM MG MAGNESIUM ION HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM PO4 PHOSPHATE ION FORMUL 3 MG 2(MG 2+) FORMUL 4 ANP 2(C10 H17 N6 O12 P3) FORMUL 5 PO4 2(O4 P 3-) FORMUL 9 HOH *155(H2 O) HELIX 1 AA1 SER A 34 ALA A 49 1 16 HELIX 2 AA2 GLU A 76 THR A 84 5 9 HELIX 3 AA3 GLU A 109 SER A 118 1 10 HELIX 4 AA4 LEU A 166 ASN A 176 1 11 HELIX 5 AA5 ASN A 176 SER A 195 1 20 HELIX 6 AA6 SER A 222 GLY A 232 1 11 HELIX 7 AA7 GLY A 232 SER A 238 1 7 HELIX 8 AA8 SER A 248 TYR A 255 1 8 HELIX 9 AA9 SER A 258 HIS A 264 1 7 HELIX 10 AB1 PRO A 299 ASN A 314 1 16 HELIX 11 AB2 ASP A 328 GLU A 330 5 3 HELIX 12 AB3 GLU A 347 SER A 365 1 19 HELIX 13 AB4 SER B 34 ALA B 49 1 16 HELIX 14 AB5 GLU B 76 THR B 84 5 9 HELIX 15 AB6 GLU B 109 SER B 118 1 10 HELIX 16 AB7 LEU B 166 ASN B 176 1 11 HELIX 17 AB8 ASN B 176 SER B 195 1 20 HELIX 18 AB9 SER B 222 GLY B 232 1 11 HELIX 19 AC1 GLY B 232 SER B 238 1 7 HELIX 20 AC2 SER B 248 TYR B 255 1 8 HELIX 21 AC3 SER B 258 HIS B 264 1 7 HELIX 22 AC4 PRO B 299 ASN B 314 1 16 HELIX 23 AC5 GLU B 347 ASP B 364 1 18 SHEET 1 AA1 8 ILE A 143 TYR A 149 0 SHEET 2 AA1 8 GLY A 132 PHE A 137 -1 N MET A 136 O ILE A 144 SHEET 3 AA1 8 ASP A 119 CYS A 125 -1 N ILE A 122 O LEU A 135 SHEET 4 AA1 8 GLY A 154 GLN A 160 -1 O SER A 158 N THR A 121 SHEET 5 AA1 8 LEU A 65 ASP A 70 -1 N ILE A 66 O VAL A 159 SHEET 6 AA1 8 ASN A 53 LYS A 59 -1 N LYS A 57 O GLU A 67 SHEET 7 AA1 8 ARG A 199 GLN A 205 1 O SER A 201 N LEU A 56 SHEET 8 AA1 8 ARG A 211 CYS A 216 -1 O GLN A 212 N ASN A 204 SHEET 1 AA2 5 LEU A 239 PRO A 241 0 SHEET 2 AA2 5 TYR A 268 SER A 274 -1 O ILE A 273 N ILE A 240 SHEET 3 AA2 5 VAL A 321 SER A 326 -1 O SER A 326 N TYR A 268 SHEET 4 AA2 5 GLN A 288 ILE A 292 1 N PHE A 289 O VAL A 321 SHEET 5 AA2 5 ARG A 295 CYS A 297 -1 O CYS A 297 N PHE A 290 SHEET 1 AA3 2 VAL A 332 ASP A 333 0 SHEET 2 AA3 2 LEU A 344 LEU A 345 -1 O LEU A 344 N ASP A 333 SHEET 1 AA4 8 ILE B 143 TYR B 149 0 SHEET 2 AA4 8 GLY B 132 PHE B 137 -1 N MET B 136 O ILE B 144 SHEET 3 AA4 8 ASP B 119 CYS B 125 -1 N ILE B 122 O LEU B 135 SHEET 4 AA4 8 GLY B 154 GLN B 160 -1 O SER B 158 N THR B 121 SHEET 5 AA4 8 LEU B 65 ASP B 70 -1 N ILE B 66 O VAL B 159 SHEET 6 AA4 8 ASN B 53 LYS B 59 -1 N LYS B 57 O GLU B 67 SHEET 7 AA4 8 ARG B 199 GLN B 205 1 O ARG B 199 N ILE B 54 SHEET 8 AA4 8 GLN B 212 CYS B 216 -1 O VAL B 214 N CYS B 202 SHEET 1 AA5 5 LEU B 239 PRO B 241 0 SHEET 2 AA5 5 TYR B 268 SER B 274 -1 O ILE B 273 N ILE B 240 SHEET 3 AA5 5 VAL B 321 SER B 326 -1 O SER B 326 N TYR B 268 SHEET 4 AA5 5 GLN B 288 ILE B 292 1 N PHE B 289 O VAL B 321 SHEET 5 AA5 5 ARG B 295 CYS B 297 -1 O CYS B 297 N PHE B 290 LINK OD1 ASN A 45 MG MG A 401 1555 1555 2.00 LINK MG MG A 401 O1G ANP A 402 1555 1555 1.99 LINK MG MG A 401 O1A ANP A 402 1555 1555 1.99 LINK MG MG A 401 O1B ANP A 402 1555 1555 1.99 LINK MG MG A 401 O HOH A 501 1555 1555 1.99 LINK MG MG A 401 O HOH A 502 1555 1555 1.99 LINK OD1 ASN B 45 MG MG B 401 1555 1555 2.00 LINK MG MG B 401 O3G ANP B 402 1555 1555 1.99 LINK MG MG B 401 O1B ANP B 402 1555 1555 1.99 LINK MG MG B 401 O2A ANP B 402 1555 1555 1.99 LINK MG MG B 401 O HOH B 501 1555 1555 1.99 LINK MG MG B 401 O HOH B 502 1555 1555 1.99 CRYST1 74.407 74.680 136.112 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013440 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013390 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007347 0.00000 CONECT 110 4800 CONECT 2572 4837 CONECT 4800 110 4802 4806 4810 CONECT 4800 4874 4875 CONECT 4801 4802 4803 4804 4808 CONECT 4802 4800 4801 CONECT 4803 4801 CONECT 4804 4801 CONECT 4805 4806 4807 4808 4812 CONECT 4806 4800 4805 CONECT 4807 4805 CONECT 4808 4801 4805 CONECT 4809 4810 4811 4812 4813 CONECT 4810 4800 4809 CONECT 4811 4809 CONECT 4812 4805 4809 CONECT 4813 4809 4814 CONECT 4814 4813 4815 CONECT 4815 4814 4816 4817 CONECT 4816 4815 4821 CONECT 4817 4815 4818 4819 CONECT 4818 4817 CONECT 4819 4817 4820 4821 CONECT 4820 4819 CONECT 4821 4816 4819 4822 CONECT 4822 4821 4823 4831 CONECT 4823 4822 4824 CONECT 4824 4823 4825 CONECT 4825 4824 4826 4831 CONECT 4826 4825 4827 4828 CONECT 4827 4826 CONECT 4828 4826 4829 CONECT 4829 4828 4830 CONECT 4830 4829 4831 CONECT 4831 4822 4825 4830 CONECT 4832 4833 4834 4835 4836 CONECT 4833 4832 CONECT 4834 4832 CONECT 4835 4832 CONECT 4836 4832 CONECT 4837 2572 4841 4843 4848 CONECT 4837 4967 4968 CONECT 4838 4839 4840 4841 4845 CONECT 4839 4838 CONECT 4840 4838 CONECT 4841 4837 4838 CONECT 4842 4843 4844 4845 4849 CONECT 4843 4837 4842 CONECT 4844 4842 CONECT 4845 4838 4842 CONECT 4846 4847 4848 4849 4850 CONECT 4847 4846 CONECT 4848 4837 4846 CONECT 4849 4842 4846 CONECT 4850 4846 4851 CONECT 4851 4850 4852 CONECT 4852 4851 4853 4854 CONECT 4853 4852 4858 CONECT 4854 4852 4855 4856 CONECT 4855 4854 CONECT 4856 4854 4857 4858 CONECT 4857 4856 CONECT 4858 4853 4856 4859 CONECT 4859 4858 4860 4868 CONECT 4860 4859 4861 CONECT 4861 4860 4862 CONECT 4862 4861 4863 4868 CONECT 4863 4862 4864 4865 CONECT 4864 4863 CONECT 4865 4863 4866 CONECT 4866 4865 4867 CONECT 4867 4866 4868 CONECT 4868 4859 4862 4867 CONECT 4869 4870 4871 4872 4873 CONECT 4870 4869 CONECT 4871 4869 CONECT 4872 4869 CONECT 4873 4869 CONECT 4874 4800 CONECT 4875 4800 CONECT 4967 4837 CONECT 4968 4837 MASTER 490 0 6 23 28 0 0 6 5026 2 82 58 END