HEADER ANTIBIOTIC 26-MAR-25 9QOL TITLE APH(2'')-IVA WITH A FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: APH(2'')-ID; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS CASSELIFLAVUS; SOURCE 3 ORGANISM_TAXID: 37734; SOURCE 4 GENE: APH(2'')-ID; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INHIBITOR, COMPLEX, ENZYME, ANTIBIOTIC EXPDTA X-RAY DIFFRACTION AUTHOR J.F.GUICHOU,M.GELIN,M.TOMASZCZYK,J.KOWALEWSKI,C.LIONNE REVDAT 1 11-FEB-26 9QOL 0 JRNL AUTH J.KOWALEWSKI,R.DEUTSCHER,M.RICHARDOZ,M.TOMASZCZYK,M.GELIN, JRNL AUTH 2 G.LABESSE,F.HAUSCH,G.D.WRIGHT,C.DUNYACH-REMY,J.F.GUICHOU, JRNL AUTH 3 C.LIONNE JRNL TITL FRAGMENT-BASED DRUG DESIGN OF A BACTERIAL KINASE INHIBITOR JRNL TITL 2 CAPABLE OF INCREASING THE ANTIBIOTIC SENSITIVITY OF CLINICAL JRNL TITL 3 ISOLATES. JRNL REF COMMUN CHEM V. 8 417 2025 JRNL REFN ESSN 2399-3669 JRNL PMID 41310159 JRNL DOI 10.1038/S42004-025-01795-6 REMARK 2 REMARK 2 RESOLUTION. 2.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 75.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.3 REMARK 3 NUMBER OF REFLECTIONS : 72852 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.780 REMARK 3 FREE R VALUE TEST SET COUNT : 3483 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 6.2200 0.86 2785 142 0.1433 0.1747 REMARK 3 2 6.2100 - 4.9300 0.88 2860 132 0.1656 0.1979 REMARK 3 3 4.9300 - 4.3100 0.88 2783 163 0.1383 0.1647 REMARK 3 4 4.3100 - 3.9200 0.89 2838 146 0.1645 0.1922 REMARK 3 5 3.9200 - 3.6400 0.89 2885 139 0.1775 0.2184 REMARK 3 6 3.6300 - 3.4200 0.90 2910 140 0.1982 0.2702 REMARK 3 7 3.4200 - 3.2500 0.89 2847 144 0.2299 0.2775 REMARK 3 8 3.2500 - 3.1100 0.91 2922 159 0.2385 0.2939 REMARK 3 9 2.9900 - 2.8900 0.90 2913 151 0.2464 0.3443 REMARK 3 10 2.8900 - 2.8000 0.91 2880 159 0.2852 0.3280 REMARK 3 11 2.8000 - 2.7200 0.91 2961 133 0.2919 0.3092 REMARK 3 12 2.7200 - 2.6400 0.90 2921 152 0.2741 0.2783 REMARK 3 13 2.6400 - 2.5800 0.82 2669 122 0.2830 0.3115 REMARK 3 14 2.5800 - 2.5200 0.86 2697 155 0.2700 0.2761 REMARK 3 15 2.5200 - 2.4700 0.90 2931 149 0.2674 0.3283 REMARK 3 16 2.4700 - 2.4200 0.90 2917 131 0.2700 0.2972 REMARK 3 17 2.4200 - 2.3700 0.88 2767 165 0.2964 0.3419 REMARK 3 18 2.3700 - 2.3300 0.90 2973 125 0.3048 0.3093 REMARK 3 19 2.3300 - 2.2900 0.91 2893 148 0.3133 0.3663 REMARK 3 20 2.2500 - 2.2200 0.51 1631 96 0.4537 0.5272 REMARK 3 21 2.2200 - 2.1900 0.84 2720 136 0.3523 0.3834 REMARK 3 22 2.1600 - 2.1300 0.75 2400 106 0.3634 0.3716 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5001 REMARK 3 ANGLE : 0.948 6759 REMARK 3 CHIRALITY : 0.055 719 REMARK 3 PLANARITY : 0.008 876 REMARK 3 DIHEDRAL : 5.525 649 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.5668 -16.6339 47.0740 REMARK 3 T TENSOR REMARK 3 T11: 0.3566 T22: 0.3422 REMARK 3 T33: 0.3246 T12: -0.0476 REMARK 3 T13: 0.0765 T23: -0.0336 REMARK 3 L TENSOR REMARK 3 L11: 2.4279 L22: 2.4161 REMARK 3 L33: 4.3521 L12: -0.2482 REMARK 3 L13: 2.3633 L23: 0.0330 REMARK 3 S TENSOR REMARK 3 S11: 0.0565 S12: -0.1301 S13: 0.0560 REMARK 3 S21: 0.3169 S22: -0.1227 S23: 0.0071 REMARK 3 S31: 0.0058 S32: -0.0976 S33: 0.1024 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 133 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.3159 -8.6228 23.0155 REMARK 3 T TENSOR REMARK 3 T11: 0.5139 T22: 0.4837 REMARK 3 T33: 0.7399 T12: -0.0111 REMARK 3 T13: 0.2272 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.8445 L22: 2.3185 REMARK 3 L33: 2.4144 L12: -1.5580 REMARK 3 L13: -1.5893 L23: 1.5910 REMARK 3 S TENSOR REMARK 3 S11: 0.2382 S12: 0.0663 S13: 0.7805 REMARK 3 S21: -0.6456 S22: 0.1279 S23: -0.8726 REMARK 3 S31: -0.3662 S32: 0.3254 S33: -0.2976 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 182 THROUGH 256 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.7344 -14.2984 29.1525 REMARK 3 T TENSOR REMARK 3 T11: 0.3367 T22: 0.2864 REMARK 3 T33: 0.3332 T12: 0.0796 REMARK 3 T13: -0.0076 T23: -0.0599 REMARK 3 L TENSOR REMARK 3 L11: 2.3155 L22: 5.2804 REMARK 3 L33: 3.1823 L12: 1.8784 REMARK 3 L13: -0.1659 L23: -1.3985 REMARK 3 S TENSOR REMARK 3 S11: 0.0582 S12: 0.0272 S13: -0.1277 REMARK 3 S21: -0.4181 S22: -0.0864 S23: 0.0824 REMARK 3 S31: 0.1594 S32: -0.1399 S33: 0.0572 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 257 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.2469 -19.7486 23.1298 REMARK 3 T TENSOR REMARK 3 T11: 0.4941 T22: 0.4332 REMARK 3 T33: 0.5793 T12: 0.0802 REMARK 3 T13: 0.2117 T23: 0.0717 REMARK 3 L TENSOR REMARK 3 L11: 7.5628 L22: 4.4288 REMARK 3 L33: 0.5201 L12: -1.1688 REMARK 3 L13: -0.3092 L23: 0.8092 REMARK 3 S TENSOR REMARK 3 S11: 0.0416 S12: -0.0595 S13: -1.0698 REMARK 3 S21: -0.5685 S22: -0.1839 S23: -0.5689 REMARK 3 S31: 0.3300 S32: 0.2345 S33: 0.1129 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 87.3453 -2.7865 -0.8849 REMARK 3 T TENSOR REMARK 3 T11: 0.2356 T22: 0.2985 REMARK 3 T33: 0.3863 T12: -0.0160 REMARK 3 T13: -0.0631 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 2.6400 L22: 3.0616 REMARK 3 L33: 3.3105 L12: -0.3681 REMARK 3 L13: -1.2996 L23: 0.4137 REMARK 3 S TENSOR REMARK 3 S11: 0.1009 S12: 0.0080 S13: 0.1992 REMARK 3 S21: -0.0166 S22: 0.1130 S23: -0.5822 REMARK 3 S31: -0.0418 S32: 0.0563 S33: -0.2300 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 133 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.4677 5.8746 -4.2941 REMARK 3 T TENSOR REMARK 3 T11: 0.4832 T22: 0.3896 REMARK 3 T33: 0.5118 T12: -0.0163 REMARK 3 T13: -0.0846 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 4.0473 L22: 2.6850 REMARK 3 L33: 3.8162 L12: 2.3048 REMARK 3 L13: 3.7462 L23: 2.5082 REMARK 3 S TENSOR REMARK 3 S11: -0.6646 S12: 0.1630 S13: 0.4801 REMARK 3 S21: -0.3058 S22: 0.1460 S23: 0.3841 REMARK 3 S31: -0.3856 S32: 0.0753 S33: 0.4578 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 256 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.2848 -0.5320 11.7260 REMARK 3 T TENSOR REMARK 3 T11: 0.3865 T22: 0.3327 REMARK 3 T33: 0.2132 T12: -0.0319 REMARK 3 T13: 0.0034 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 5.0768 L22: 4.9693 REMARK 3 L33: 1.5290 L12: -1.9861 REMARK 3 L13: 0.9157 L23: -0.2366 REMARK 3 S TENSOR REMARK 3 S11: 0.0859 S12: -0.2314 S13: -0.3188 REMARK 3 S21: 0.4072 S22: -0.0157 S23: 0.2053 REMARK 3 S31: 0.1239 S32: -0.0753 S33: -0.0842 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 257 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.1017 -5.4623 -1.7362 REMARK 3 T TENSOR REMARK 3 T11: 0.4464 T22: 0.4002 REMARK 3 T33: 0.6144 T12: 0.0512 REMARK 3 T13: -0.1285 T23: -0.0327 REMARK 3 L TENSOR REMARK 3 L11: 4.1175 L22: 4.6342 REMARK 3 L33: 9.2213 L12: 2.2786 REMARK 3 L13: 2.2921 L23: 1.9655 REMARK 3 S TENSOR REMARK 3 S11: 0.2033 S12: 0.4420 S13: -0.7187 REMARK 3 S21: -0.2985 S22: 0.2543 S23: 0.3623 REMARK 3 S31: 0.8863 S32: 0.2123 S33: -0.4877 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9QOL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-MAR-25. REMARK 100 THE DEPOSITION ID IS D_1292146652. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9897 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72852 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.130 REMARK 200 RESOLUTION RANGE LOW (A) : 75.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG3350, 50-90 MM AMMONIUM REMARK 280 CITRATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.81500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 ILE B 298 REMARK 465 LYS B 299 REMARK 465 ILE B 300 REMARK 465 LYS B 301 REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 ILE A 298 REMARK 465 LYS A 299 REMARK 465 ILE A 300 REMARK 465 LYS A 301 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET B 1 CG SD CE REMARK 470 LYS B 11 CG CD CE NZ REMARK 470 GLU B 86 CG CD OE1 OE2 REMARK 470 LYS B 159 CG CD CE NZ REMARK 470 GLU B 208 CG CD OE1 OE2 REMARK 470 TYR B 278 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 281 CG CD OE1 OE2 REMARK 470 MET B 285 CG SD CE REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 470 LYS A 99 CG CD CE NZ REMARK 470 LYS A 113 CG CD CE NZ REMARK 470 LYS A 155 CG CD CE NZ REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 LYS A 172 CG CD CE NZ REMARK 470 GLU A 243 CG CD OE1 OE2 REMARK 470 LYS A 267 CG CD CE NZ REMARK 470 GLU A 268 CG CD OE1 OE2 REMARK 470 TYR A 278 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 280 CG CD CE NZ REMARK 470 GLU A 281 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN B 32 OH TYR B 284 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 40 18.96 56.77 REMARK 500 ARG B 41 -18.83 73.14 REMARK 500 GLU B 86 103.82 -59.37 REMARK 500 THR B 87 -9.18 78.98 REMARK 500 ASP B 197 47.56 -144.05 REMARK 500 ASP B 217 71.42 72.10 REMARK 500 SER B 224 -160.11 -168.86 REMARK 500 ASP B 237 -70.27 69.93 REMARK 500 GLU B 239 -160.30 -121.07 REMARK 500 GLU B 281 -81.42 -55.56 REMARK 500 ARG A 41 -29.39 74.25 REMARK 500 GLU A 86 106.17 -59.12 REMARK 500 THR A 87 -7.91 79.91 REMARK 500 ASP A 197 46.55 -150.70 REMARK 500 ASP A 217 79.49 59.07 REMARK 500 SER A 224 -157.07 -166.79 REMARK 500 GLU A 239 -153.60 -125.90 REMARK 500 ARG A 296 78.01 -66.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9QMR RELATED DB: PDB DBREF 9QOL B 1 301 UNP O68183 O68183_ENTCA 1 301 DBREF 9QOL A 1 301 UNP O68183 O68183_ENTCA 1 301 SEQADV 9QOL MET B -19 UNP O68183 INITIATING METHIONINE SEQADV 9QOL GLY B -18 UNP O68183 EXPRESSION TAG SEQADV 9QOL SER B -17 UNP O68183 EXPRESSION TAG SEQADV 9QOL SER B -16 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS B -15 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS B -14 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS B -13 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS B -12 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS B -11 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS B -10 UNP O68183 EXPRESSION TAG SEQADV 9QOL SER B -9 UNP O68183 EXPRESSION TAG SEQADV 9QOL SER B -8 UNP O68183 EXPRESSION TAG SEQADV 9QOL GLY B -7 UNP O68183 EXPRESSION TAG SEQADV 9QOL LEU B -6 UNP O68183 EXPRESSION TAG SEQADV 9QOL VAL B -5 UNP O68183 EXPRESSION TAG SEQADV 9QOL PRO B -4 UNP O68183 EXPRESSION TAG SEQADV 9QOL ARG B -3 UNP O68183 EXPRESSION TAG SEQADV 9QOL GLY B -2 UNP O68183 EXPRESSION TAG SEQADV 9QOL SER B -1 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS B 0 UNP O68183 EXPRESSION TAG SEQADV 9QOL MET A -19 UNP O68183 INITIATING METHIONINE SEQADV 9QOL GLY A -18 UNP O68183 EXPRESSION TAG SEQADV 9QOL SER A -17 UNP O68183 EXPRESSION TAG SEQADV 9QOL SER A -16 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS A -15 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS A -14 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS A -13 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS A -12 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS A -11 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS A -10 UNP O68183 EXPRESSION TAG SEQADV 9QOL SER A -9 UNP O68183 EXPRESSION TAG SEQADV 9QOL SER A -8 UNP O68183 EXPRESSION TAG SEQADV 9QOL GLY A -7 UNP O68183 EXPRESSION TAG SEQADV 9QOL LEU A -6 UNP O68183 EXPRESSION TAG SEQADV 9QOL VAL A -5 UNP O68183 EXPRESSION TAG SEQADV 9QOL PRO A -4 UNP O68183 EXPRESSION TAG SEQADV 9QOL ARG A -3 UNP O68183 EXPRESSION TAG SEQADV 9QOL GLY A -2 UNP O68183 EXPRESSION TAG SEQADV 9QOL SER A -1 UNP O68183 EXPRESSION TAG SEQADV 9QOL HIS A 0 UNP O68183 EXPRESSION TAG SEQRES 1 B 321 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 321 LEU VAL PRO ARG GLY SER HIS MET ARG THR TYR THR PHE SEQRES 3 B 321 ASP GLN VAL GLU LYS ALA ILE GLU GLN LEU TYR PRO ASP SEQRES 4 B 321 PHE THR ILE ASN THR ILE GLU ILE SER GLY GLU GLY ASN SEQRES 5 B 321 ASP CYS ILE ALA TYR GLU ILE ASN ARG ASP PHE ILE PHE SEQRES 6 B 321 LYS PHE PRO LYS HIS SER ARG GLY SER THR ASN LEU PHE SEQRES 7 B 321 ASN GLU VAL ASN ILE LEU LYS ARG ILE HIS ASN LYS LEU SEQRES 8 B 321 PRO LEU PRO ILE PRO GLU VAL VAL PHE THR GLY MET PRO SEQRES 9 B 321 SER GLU THR TYR GLN MET SER PHE ALA GLY PHE THR LYS SEQRES 10 B 321 ILE LYS GLY VAL PRO LEU THR PRO LEU LEU LEU ASN ASN SEQRES 11 B 321 LEU PRO LYS GLN SER GLN ASN GLN ALA ALA LYS ASP LEU SEQRES 12 B 321 ALA ARG PHE LEU SER GLU LEU HIS SER ILE ASN ILE SER SEQRES 13 B 321 GLY PHE LYS SER ASN LEU VAL LEU ASP PHE ARG GLU LYS SEQRES 14 B 321 ILE ASN GLU ASP ASN LYS LYS ILE LYS LYS LEU LEU SER SEQRES 15 B 321 ARG GLU LEU LYS GLY PRO GLN MET LYS LYS VAL ASP ASP SEQRES 16 B 321 PHE TYR ARG ASP ILE LEU GLU ASN GLU ILE TYR PHE LYS SEQRES 17 B 321 TYR TYR PRO CYS LEU ILE HIS ASN ASP PHE SER SER ASP SEQRES 18 B 321 HIS ILE LEU PHE ASP THR GLU LYS ASN THR ILE CYS GLY SEQRES 19 B 321 ILE ILE ASP PHE GLY ASP ALA ALA ILE SER ASP PRO ASP SEQRES 20 B 321 ASN ASP PHE ILE SER LEU MET GLU ASP ASP GLU GLU TYR SEQRES 21 B 321 GLY MET GLU PHE VAL SER LYS ILE LEU ASN HIS TYR LYS SEQRES 22 B 321 HIS LYS ASP ILE PRO THR VAL LEU GLU LYS TYR ARG MET SEQRES 23 B 321 LYS GLU LYS TYR TRP SER PHE GLU LYS ILE ILE TYR GLY SEQRES 24 B 321 LYS GLU TYR GLY TYR MET ASP TRP TYR GLU GLU GLY LEU SEQRES 25 B 321 ASN GLU ILE ARG SER ILE LYS ILE LYS SEQRES 1 A 321 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 321 LEU VAL PRO ARG GLY SER HIS MET ARG THR TYR THR PHE SEQRES 3 A 321 ASP GLN VAL GLU LYS ALA ILE GLU GLN LEU TYR PRO ASP SEQRES 4 A 321 PHE THR ILE ASN THR ILE GLU ILE SER GLY GLU GLY ASN SEQRES 5 A 321 ASP CYS ILE ALA TYR GLU ILE ASN ARG ASP PHE ILE PHE SEQRES 6 A 321 LYS PHE PRO LYS HIS SER ARG GLY SER THR ASN LEU PHE SEQRES 7 A 321 ASN GLU VAL ASN ILE LEU LYS ARG ILE HIS ASN LYS LEU SEQRES 8 A 321 PRO LEU PRO ILE PRO GLU VAL VAL PHE THR GLY MET PRO SEQRES 9 A 321 SER GLU THR TYR GLN MET SER PHE ALA GLY PHE THR LYS SEQRES 10 A 321 ILE LYS GLY VAL PRO LEU THR PRO LEU LEU LEU ASN ASN SEQRES 11 A 321 LEU PRO LYS GLN SER GLN ASN GLN ALA ALA LYS ASP LEU SEQRES 12 A 321 ALA ARG PHE LEU SER GLU LEU HIS SER ILE ASN ILE SER SEQRES 13 A 321 GLY PHE LYS SER ASN LEU VAL LEU ASP PHE ARG GLU LYS SEQRES 14 A 321 ILE ASN GLU ASP ASN LYS LYS ILE LYS LYS LEU LEU SER SEQRES 15 A 321 ARG GLU LEU LYS GLY PRO GLN MET LYS LYS VAL ASP ASP SEQRES 16 A 321 PHE TYR ARG ASP ILE LEU GLU ASN GLU ILE TYR PHE LYS SEQRES 17 A 321 TYR TYR PRO CYS LEU ILE HIS ASN ASP PHE SER SER ASP SEQRES 18 A 321 HIS ILE LEU PHE ASP THR GLU LYS ASN THR ILE CYS GLY SEQRES 19 A 321 ILE ILE ASP PHE GLY ASP ALA ALA ILE SER ASP PRO ASP SEQRES 20 A 321 ASN ASP PHE ILE SER LEU MET GLU ASP ASP GLU GLU TYR SEQRES 21 A 321 GLY MET GLU PHE VAL SER LYS ILE LEU ASN HIS TYR LYS SEQRES 22 A 321 HIS LYS ASP ILE PRO THR VAL LEU GLU LYS TYR ARG MET SEQRES 23 A 321 LYS GLU LYS TYR TRP SER PHE GLU LYS ILE ILE TYR GLY SEQRES 24 A 321 LYS GLU TYR GLY TYR MET ASP TRP TYR GLU GLU GLY LEU SEQRES 25 A 321 ASN GLU ILE ARG SER ILE LYS ILE LYS HET PWD B 401 10 HET PWD A 401 10 HETNAM PWD 5-FLUORO-1H-PYRROLO[2,3-B]PYRIDINE FORMUL 3 PWD 2(C7 H5 F N2) FORMUL 5 HOH *43(H2 O) HELIX 1 AA1 THR B 5 TYR B 17 1 13 HELIX 2 AA2 HIS B 50 ILE B 67 1 18 HELIX 3 AA3 THR B 104 ASN B 110 1 7 HELIX 4 AA4 PRO B 112 HIS B 131 1 20 HELIX 5 AA5 LYS B 139 VAL B 143 5 5 HELIX 6 AA6 ASP B 145 SER B 162 1 18 HELIX 7 AA7 LYS B 166 GLU B 182 1 17 HELIX 8 AA8 ASN B 183 PHE B 187 5 5 HELIX 9 AA9 SER B 199 ASP B 201 5 3 HELIX 10 AB1 ASP B 227 SER B 232 1 6 HELIX 11 AB2 GLY B 241 TYR B 252 1 12 HELIX 12 AB3 ASP B 256 TYR B 282 1 27 HELIX 13 AB4 TYR B 284 ARG B 296 1 13 HELIX 14 AB5 THR A 5 TYR A 17 1 13 HELIX 15 AB6 HIS A 50 HIS A 68 1 19 HELIX 16 AB7 THR A 104 LEU A 111 1 8 HELIX 17 AB8 PRO A 112 ILE A 133 1 22 HELIX 18 AB9 LYS A 139 VAL A 143 5 5 HELIX 19 AC1 ASP A 145 ARG A 163 1 19 HELIX 20 AC2 LYS A 166 GLU A 182 1 17 HELIX 21 AC3 ASN A 183 PHE A 187 5 5 HELIX 22 AC4 SER A 199 ASP A 201 5 3 HELIX 23 AC5 ASP A 227 GLU A 235 1 9 HELIX 24 AC6 GLY A 241 LYS A 253 1 13 HELIX 25 AC7 ASP A 256 GLY A 283 1 28 HELIX 26 AC8 TYR A 284 ARG A 296 1 13 SHEET 1 AA1 5 ILE B 25 GLU B 30 0 SHEET 2 AA1 5 CYS B 34 ILE B 39 -1 O ALA B 36 N GLY B 29 SHEET 3 AA1 5 PHE B 43 PRO B 48 -1 O PHE B 45 N TYR B 37 SHEET 4 AA1 5 ALA B 93 THR B 96 -1 O PHE B 95 N ILE B 44 SHEET 5 AA1 5 VAL B 78 THR B 81 -1 N VAL B 79 O GLY B 94 SHEET 1 AA2 3 VAL B 101 PRO B 102 0 SHEET 2 AA2 3 ILE B 203 ASP B 206 -1 O PHE B 205 N VAL B 101 SHEET 3 AA2 3 THR B 211 ILE B 215 -1 O CYS B 213 N LEU B 204 SHEET 1 AA3 2 CYS B 192 ILE B 194 0 SHEET 2 AA3 2 ALA B 222 SER B 224 -1 O ALA B 222 N ILE B 194 SHEET 1 AA4 5 ILE A 25 GLU A 30 0 SHEET 2 AA4 5 CYS A 34 ILE A 39 -1 O ALA A 36 N GLY A 29 SHEET 3 AA4 5 PHE A 43 PRO A 48 -1 O PHE A 45 N TYR A 37 SHEET 4 AA4 5 ALA A 93 THR A 96 -1 O PHE A 95 N ILE A 44 SHEET 5 AA4 5 VAL A 78 THR A 81 -1 N VAL A 79 O GLY A 94 SHEET 1 AA5 3 VAL A 101 PRO A 102 0 SHEET 2 AA5 3 ILE A 203 ASP A 206 -1 O PHE A 205 N VAL A 101 SHEET 3 AA5 3 THR A 211 ILE A 215 -1 O GLY A 214 N LEU A 204 SHEET 1 AA6 2 CYS A 192 ILE A 194 0 SHEET 2 AA6 2 ALA A 222 SER A 224 -1 O SER A 224 N CYS A 192 CRYST1 77.921 65.630 75.818 90.00 91.75 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012834 0.000000 0.000392 0.00000 SCALE2 0.000000 0.015237 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013196 0.00000 CONECT 4859 4866 4867 CONECT 4860 4861 4867 CONECT 4861 4860 4862 4866 CONECT 4862 4861 4864 CONECT 4863 4865 4866 CONECT 4864 4862 4865 4868 CONECT 4865 4863 4864 CONECT 4866 4859 4861 4863 CONECT 4867 4859 4860 CONECT 4868 4864 CONECT 4869 4876 4877 CONECT 4870 4871 4877 CONECT 4871 4870 4872 4876 CONECT 4872 4871 4874 CONECT 4873 4875 4876 CONECT 4874 4872 4875 4878 CONECT 4875 4873 4874 CONECT 4876 4869 4871 4873 CONECT 4877 4869 4870 CONECT 4878 4874 MASTER 456 0 2 26 20 0 0 6 4901 2 20 50 END