HEADER OXIDOREDUCTASE 27-MAR-25 9QPI TITLE ISOPENICILLIN N SYNTHASE IN COMPLEX WITH FE AND ACV COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOPENICILLIN N SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IPNS; COMPND 5 EC: 1.21.3.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS NIDULANS FGSC A4; SOURCE 3 ORGANISM_TAXID: 227321; SOURCE 4 GENE: IPNA, IPS, AN2622; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PCOLD_IPNS KEYWDS ISOPENICILLIN N SYNTHASE, IPNS, TR-SFX, XFEL, TIME-RESOLVED KEYWDS 2 CRYSTALLOGRAPHY, ADE TAPE DRIVE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.RABE,C.J.SCHOFIELD,A.STEAD REVDAT 1 08-APR-26 9QPI 0 JRNL AUTH P.RABE,C.J.SCHOFIELD,A.STEAD JRNL TITL ISOPENICILLIN N SYNTHASE IN COMPLEX WITH FE AND ACV JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.1_5286 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 57981 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.450 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.5700 - 3.4900 1.00 4251 152 0.1197 0.1273 REMARK 3 2 3.4900 - 2.7700 1.00 4078 146 0.1406 0.1548 REMARK 3 3 2.7700 - 2.4200 1.00 4052 144 0.1533 0.1725 REMARK 3 4 2.4200 - 2.2000 1.00 3981 142 0.1397 0.1742 REMARK 3 5 2.2000 - 2.0400 1.00 4022 144 0.1426 0.1640 REMARK 3 6 2.0400 - 1.9200 1.00 3981 142 0.1453 0.1855 REMARK 3 7 1.9200 - 1.8300 1.00 3972 143 0.1612 0.2029 REMARK 3 8 1.8300 - 1.7500 1.00 3952 140 0.1732 0.2335 REMARK 3 9 1.7500 - 1.6800 1.00 3986 143 0.1791 0.2463 REMARK 3 10 1.6800 - 1.6200 1.00 3954 142 0.1924 0.2038 REMARK 3 11 1.6200 - 1.5700 1.00 3942 140 0.2112 0.2602 REMARK 3 12 1.5700 - 1.5300 1.00 3965 141 0.2393 0.2544 REMARK 3 13 1.5300 - 1.4900 1.00 3924 141 0.2764 0.3025 REMARK 3 14 1.4900 - 1.4500 1.00 3921 140 0.3082 0.3871 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.175 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.558 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 2827 REMARK 3 ANGLE : 1.231 3873 REMARK 3 CHIRALITY : 0.106 405 REMARK 3 PLANARITY : 0.010 521 REMARK 3 DIHEDRAL : 12.589 1029 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3923 3.5715 -14.9619 REMARK 3 T TENSOR REMARK 3 T11: 0.0946 T22: 0.1254 REMARK 3 T33: 0.0995 T12: 0.0092 REMARK 3 T13: -0.0177 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 2.5280 L22: 1.8069 REMARK 3 L33: 3.6967 L12: -0.2575 REMARK 3 L13: -0.5970 L23: 0.5039 REMARK 3 S TENSOR REMARK 3 S11: 0.0192 S12: 0.1881 S13: -0.0327 REMARK 3 S21: -0.0594 S22: -0.0038 S23: -0.0192 REMARK 3 S31: 0.0879 S32: -0.2018 S33: 0.0316 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3442 0.2695 1.0383 REMARK 3 T TENSOR REMARK 3 T11: 0.1167 T22: 0.1439 REMARK 3 T33: 0.1498 T12: 0.0134 REMARK 3 T13: 0.0113 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.9037 L22: 0.8116 REMARK 3 L33: 3.9209 L12: -0.3564 REMARK 3 L13: 0.4127 L23: -0.2476 REMARK 3 S TENSOR REMARK 3 S11: -0.0152 S12: -0.1230 S13: -0.1145 REMARK 3 S21: 0.0805 S22: 0.0335 S23: 0.1364 REMARK 3 S31: 0.2271 S32: -0.4069 S33: -0.0553 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 65 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6709 -6.4994 24.2697 REMARK 3 T TENSOR REMARK 3 T11: 0.2366 T22: 0.1731 REMARK 3 T33: 0.1145 T12: 0.0106 REMARK 3 T13: -0.0092 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 7.9844 L22: 4.3154 REMARK 3 L33: 4.9289 L12: -0.5195 REMARK 3 L13: -0.0231 L23: 0.3138 REMARK 3 S TENSOR REMARK 3 S11: 0.0343 S12: -0.2163 S13: -0.2189 REMARK 3 S21: 0.1083 S22: 0.0188 S23: 0.0276 REMARK 3 S31: 0.3760 S32: 0.0116 S33: -0.0240 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1215 -6.3729 15.1200 REMARK 3 T TENSOR REMARK 3 T11: 0.2063 T22: 0.1363 REMARK 3 T33: 0.1155 T12: 0.0083 REMARK 3 T13: -0.0080 T23: 0.0307 REMARK 3 L TENSOR REMARK 3 L11: 1.5850 L22: 4.3424 REMARK 3 L33: 2.2127 L12: -0.7971 REMARK 3 L13: -0.1446 L23: 0.7457 REMARK 3 S TENSOR REMARK 3 S11: -0.1050 S12: -0.1831 S13: -0.0918 REMARK 3 S21: 0.3702 S22: 0.1171 S23: -0.0382 REMARK 3 S31: 0.4443 S32: 0.1905 S33: -0.0353 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9777 -15.3553 13.3331 REMARK 3 T TENSOR REMARK 3 T11: 0.3857 T22: 0.1697 REMARK 3 T33: 0.1738 T12: 0.0024 REMARK 3 T13: -0.0257 T23: 0.0717 REMARK 3 L TENSOR REMARK 3 L11: 4.5606 L22: 1.9640 REMARK 3 L33: 2.0350 L12: -0.7599 REMARK 3 L13: -0.3716 L23: 0.3285 REMARK 3 S TENSOR REMARK 3 S11: -0.0086 S12: -0.4875 S13: -0.4601 REMARK 3 S21: 0.1067 S22: 0.0090 S23: 0.0207 REMARK 3 S31: 0.7816 S32: 0.0703 S33: 0.0308 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9845 -9.5738 -5.3059 REMARK 3 T TENSOR REMARK 3 T11: 0.1919 T22: 0.0846 REMARK 3 T33: 0.1293 T12: 0.0166 REMARK 3 T13: -0.0228 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 0.8785 L22: 1.7369 REMARK 3 L33: 4.0738 L12: 0.5320 REMARK 3 L13: -0.2075 L23: -1.4029 REMARK 3 S TENSOR REMARK 3 S11: 0.0157 S12: 0.0540 S13: -0.1126 REMARK 3 S21: -0.0482 S22: 0.0142 S23: 0.0005 REMARK 3 S31: 0.5398 S32: 0.0047 S33: 0.0375 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 286 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6551 9.0425 4.0305 REMARK 3 T TENSOR REMARK 3 T11: 0.0910 T22: 0.0885 REMARK 3 T33: 0.1145 T12: 0.0059 REMARK 3 T13: -0.0113 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.4229 L22: 1.1989 REMARK 3 L33: 2.2918 L12: 0.0805 REMARK 3 L13: -0.4140 L23: 0.1547 REMARK 3 S TENSOR REMARK 3 S11: 0.0306 S12: -0.0186 S13: 0.1271 REMARK 3 S21: 0.1031 S22: 0.0115 S23: 0.0396 REMARK 3 S31: -0.1055 S32: 0.0239 S33: -0.0494 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 287 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6640 -2.5562 -10.0774 REMARK 3 T TENSOR REMARK 3 T11: 0.2247 T22: 0.3883 REMARK 3 T33: 0.2093 T12: 0.0690 REMARK 3 T13: 0.0351 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 1.7325 L22: 1.4962 REMARK 3 L33: 2.8823 L12: -0.6318 REMARK 3 L13: 0.7247 L23: -0.8332 REMARK 3 S TENSOR REMARK 3 S11: 0.0700 S12: 0.1601 S13: 0.0979 REMARK 3 S21: -0.3171 S22: -0.2439 S23: -0.2665 REMARK 3 S31: 0.2309 S32: 1.0832 S33: 0.2192 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 313 THROUGH 331 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.6417 1.0110 8.5950 REMARK 3 T TENSOR REMARK 3 T11: 0.2039 T22: 0.3014 REMARK 3 T33: 0.2250 T12: 0.0156 REMARK 3 T13: -0.0234 T23: 0.0362 REMARK 3 L TENSOR REMARK 3 L11: 1.4597 L22: 3.7397 REMARK 3 L33: 6.8202 L12: -1.1786 REMARK 3 L13: -1.9006 L23: 3.9607 REMARK 3 S TENSOR REMARK 3 S11: -0.0678 S12: -0.2592 S13: 0.1041 REMARK 3 S21: 0.3388 S22: 0.1385 S23: -0.0833 REMARK 3 S31: -0.0117 S32: 0.4681 S33: -0.0966 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9QPI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-MAR-25. REMARK 100 THE DEPOSITION ID IS D_1292145857. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-25 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : MFX REMARK 200 X-RAY GENERATOR MODEL : SLAC LCLS BEAMLINE MFX REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.282235 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX340-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CCTBX.XFEL REMARK 200 DATA SCALING SOFTWARE : CCTBX.XFEL.MERGE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57981 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 22.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 52.48 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 12.31 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.064 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NEEDLE MORPHOLOGY, 3 UM X 3 UM X 60 - 80 UM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 M LI2SO4, 0.1 M TRIS PH 8.5, BATCH REMARK 280 MODE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.91700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.90300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.76050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.90300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.91700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.76050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 53 CD NE CZ NH1 NH2 REMARK 470 LYS A 59 CE NZ REMARK 470 LYS A 80 NZ REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 LYS A 134 NZ REMARK 470 LYS A 201 CD CE NZ REMARK 470 LYS A 266 CD CE NZ REMARK 470 LYS A 305 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 704 O HOH A 716 2.18 REMARK 500 OE2 GLU A 215 O HOH A 501 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 38 -107.18 -112.03 REMARK 500 ASP A 38 -107.18 -97.96 REMARK 500 LYS A 97 -45.81 -134.21 REMARK 500 THR A 123 -6.68 76.79 REMARK 500 ASN A 230 -24.72 -151.05 REMARK 500 LEU A 288 -159.22 -86.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 403 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 214 NE2 REMARK 620 2 ASP A 216 OD1 100.1 REMARK 620 3 HIS A 270 NE2 86.2 89.3 REMARK 620 4 ACV A 404 S17 93.7 89.4 178.7 REMARK 620 5 HOH A 620 O 161.2 98.3 90.2 90.3 REMARK 620 N 1 2 3 4 DBREF 9QPI A 1 331 UNP P05326 IPNA_EMENI 1 331 SEQRES 1 A 331 MET GLY SER VAL SER LYS ALA ASN VAL PRO LYS ILE ASP SEQRES 2 A 331 VAL SER PRO LEU PHE GLY ASP ASP GLN ALA ALA LYS MET SEQRES 3 A 331 ARG VAL ALA GLN GLN ILE ASP ALA ALA SER ARG ASP THR SEQRES 4 A 331 GLY PHE PHE TYR ALA VAL ASN HIS GLY ILE ASN VAL GLN SEQRES 5 A 331 ARG LEU SER GLN LYS THR LYS GLU PHE HIS MET SER ILE SEQRES 6 A 331 THR PRO GLU GLU LYS TRP ASP LEU ALA ILE ARG ALA TYR SEQRES 7 A 331 ASN LYS GLU HIS GLN ASP GLN VAL ARG ALA GLY TYR TYR SEQRES 8 A 331 LEU SER ILE PRO GLY LYS LYS ALA VAL GLU SER PHE CYS SEQRES 9 A 331 TYR LEU ASN PRO ASN PHE THR PRO ASP HIS PRO ARG ILE SEQRES 10 A 331 GLN ALA LYS THR PRO THR HIS GLU VAL ASN VAL TRP PRO SEQRES 11 A 331 ASP GLU THR LYS HIS PRO GLY PHE GLN ASP PHE ALA GLU SEQRES 12 A 331 GLN TYR TYR TRP ASP VAL PHE GLY LEU SER SER ALA LEU SEQRES 13 A 331 LEU LYS GLY TYR ALA LEU ALA LEU GLY LYS GLU GLU ASN SEQRES 14 A 331 PHE PHE ALA ARG HIS PHE LYS PRO ASP ASP THR LEU ALA SEQRES 15 A 331 SER VAL VAL LEU ILE ARG TYR PRO TYR LEU ASP PRO TYR SEQRES 16 A 331 PRO GLU ALA ALA ILE LYS THR ALA ALA ASP GLY THR LYS SEQRES 17 A 331 LEU SER PHE GLU TRP HIS GLU ASP VAL SER LEU ILE THR SEQRES 18 A 331 VAL LEU TYR GLN SER ASN VAL GLN ASN LEU GLN VAL GLU SEQRES 19 A 331 THR ALA ALA GLY TYR GLN ASP ILE GLU ALA ASP ASP THR SEQRES 20 A 331 GLY TYR LEU ILE ASN CYS GLY SER TYR MET ALA HIS LEU SEQRES 21 A 331 THR ASN ASN TYR TYR LYS ALA PRO ILE HIS ARG VAL LYS SEQRES 22 A 331 TRP VAL ASN ALA GLU ARG GLN SER LEU PRO PHE PHE VAL SEQRES 23 A 331 ASN LEU GLY TYR ASP SER VAL ILE ASP PRO PHE ASP PRO SEQRES 24 A 331 ARG GLU PRO ASN GLY LYS SER ASP ARG GLU PRO LEU SER SEQRES 25 A 331 TYR GLY ASP TYR LEU GLN ASN GLY LEU VAL SER LEU ILE SEQRES 26 A 331 ASN LYS ASN GLY GLN THR HET SO4 A 401 5 HET SO4 A 402 5 HET FE A 403 1 HET ACV A 404 24 HETNAM SO4 SULFATE ION HETNAM FE FE (III) ION HETNAM ACV L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 FE FE 3+ FORMUL 5 ACV C14 H25 N3 O6 S FORMUL 6 HOH *227(H2 O) HELIX 1 AA1 SER A 15 GLY A 19 5 5 HELIX 2 AA2 ASP A 21 ARG A 37 1 17 HELIX 3 AA3 ASN A 50 ILE A 65 1 16 HELIX 4 AA4 THR A 66 ALA A 74 1 9 HELIX 5 AA5 HIS A 114 ALA A 119 1 6 HELIX 6 AA6 GLY A 137 LEU A 164 1 28 HELIX 7 AA7 PHE A 171 PHE A 175 5 5 HELIX 8 AA8 PRO A 196 ILE A 200 5 5 HELIX 9 AA9 GLY A 254 THR A 261 1 8 HELIX 10 AB1 SER A 312 GLY A 329 1 18 SHEET 1 AA1 8 LYS A 11 ASP A 13 0 SHEET 2 AA1 8 PHE A 41 VAL A 45 1 O TYR A 43 N ILE A 12 SHEET 3 AA1 8 TYR A 249 CYS A 253 -1 O ILE A 251 N PHE A 42 SHEET 4 AA1 8 ILE A 220 GLN A 225 -1 N LEU A 223 O LEU A 250 SHEET 5 AA1 8 ARG A 279 VAL A 286 -1 O LEU A 282 N TYR A 224 SHEET 6 AA1 8 SER A 183 TYR A 189 -1 N TYR A 189 O ARG A 279 SHEET 7 AA1 8 GLU A 101 TYR A 105 -1 N PHE A 103 O LEU A 186 SHEET 8 AA1 8 GLY A 89 TYR A 91 -1 N TYR A 91 O SER A 102 SHEET 1 AA2 5 LYS A 201 THR A 202 0 SHEET 2 AA2 5 LYS A 208 HIS A 214 -1 O LEU A 209 N LYS A 201 SHEET 3 AA2 5 HIS A 270 LYS A 273 -1 O VAL A 272 N SER A 210 SHEET 4 AA2 5 LEU A 231 THR A 235 -1 N GLN A 232 O ARG A 271 SHEET 5 AA2 5 GLY A 238 ASP A 241 -1 O GLN A 240 N VAL A 233 LINK NE2 HIS A 214 FE FE A 403 1555 1555 2.16 LINK OD1 ASP A 216 FE FE A 403 1555 1555 2.07 LINK NE2 HIS A 270 FE FE A 403 1555 1555 2.17 LINK FE FE A 403 S17 ACV A 404 1555 1555 2.36 LINK FE FE A 403 O HOH A 620 1555 1555 2.07 CISPEP 1 ASP A 193 PRO A 194 0 -0.17 CRYST1 41.834 75.521 101.806 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023904 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013241 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009823 0.00000 CONECT 1745 2722 CONECT 1770 2722 CONECT 2206 2722 CONECT 2712 2713 2714 2715 2716 CONECT 2713 2712 CONECT 2714 2712 CONECT 2715 2712 CONECT 2716 2712 CONECT 2717 2718 2719 2720 2721 CONECT 2718 2717 CONECT 2719 2717 CONECT 2720 2717 CONECT 2721 2717 CONECT 2722 1745 1770 2206 2735 CONECT 2722 2866 CONECT 2723 2724 2737 2738 CONECT 2724 2723 2725 2732 CONECT 2725 2724 2726 CONECT 2726 2725 2727 CONECT 2727 2726 2728 CONECT 2728 2727 2729 2733 CONECT 2729 2728 2730 CONECT 2730 2729 2731 2734 CONECT 2731 2730 2736 2739 CONECT 2732 2724 CONECT 2733 2728 CONECT 2734 2730 2735 CONECT 2735 2722 2734 CONECT 2736 2731 CONECT 2737 2723 CONECT 2738 2723 CONECT 2739 2731 2740 CONECT 2740 2739 2741 2742 CONECT 2741 2740 2745 2746 CONECT 2742 2740 2743 2744 CONECT 2743 2742 CONECT 2744 2742 CONECT 2745 2741 CONECT 2746 2741 CONECT 2866 2722 MASTER 406 0 4 10 13 0 0 6 2884 1 40 26 END