data_9QUH # _entry.id 9QUH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.413 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9QUH pdb_00009quh 10.2210/pdb9quh/pdb WWPDB D_1292147058 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-04-22 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9QUH _pdbx_database_status.recvd_initial_deposition_date 2025-04-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email xzou@mmk.su.se _pdbx_contact_author.name_first Xiaodong _pdbx_contact_author.name_last Zou _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-6748-6656 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hofer, G.' 1 0000-0002-9248-6989 'Wang, L.' 2 0000-0002-7398-1124 'Pacoste, L.' 3 0009-0005-6090-8736 'Hager, P.' 4 0009-0008-1551-2515 'Fonjallaz, A.' 5 0000-0002-9390-1654 'Scaletti Hutchinson, E.' 6 0000-0002-8741-8981 'Stenmark, P.' 7 0000-0003-4777-3417 'Di Palma, M.' 8 0000-0002-0710-9389 'Williams, L.' 9 0009-0002-4066-3899 'Worral, J.' 10 0000-0002-1863-834X 'Steiner, R.' 11 0000-0001-7084-9745 'Xu, H.' 12 0000-0002-8271-3906 'Zou, X.' 13 0000-0001-6748-6656 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Continuous Serial Electron Diffraction for High Quality Protein Structures ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hofer, G.' 1 0000-0002-9248-6989 primary 'Wang, L.' 2 0000-0002-7398-1124 primary 'Pacoste, L.' 3 0009-0005-6090-8736 primary 'Hager, P.' 4 0009-0008-1551-2515 primary 'Fonjallaz, A.' 5 0000-0002-9390-1654 primary 'Williams, L.' 6 0009-0002-4066-3899 primary 'Worrall, J.' 7 0000-0002-1863-834X primary 'Steiner, R.' 8 0000-0001-7084-9745 primary 'Xu, H.' 9 0000-0002-8271-3906 primary 'Zou, X.' 10 0000-0001-6748-6656 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '7,8-dihydro-8-oxoguanine triphosphatase' 18253.736 2 3.6.1.55,3.6.1.56 ? ? ? 2 non-polymer syn "8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" 523.180 2 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 4 water nat water 18.015 41 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '2-hydroxy-dATP diphosphatase,8-oxo-dGTPase,Nucleoside diphosphate-linked moiety X motif 1,Nudix motif 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGE PELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGE PELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" 8DG 3 'SULFATE ION' SO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLY n 1 6 ALA n 1 7 SER n 1 8 ARG n 1 9 LEU n 1 10 TYR n 1 11 THR n 1 12 LEU n 1 13 VAL n 1 14 LEU n 1 15 VAL n 1 16 LEU n 1 17 GLN n 1 18 PRO n 1 19 GLN n 1 20 ARG n 1 21 VAL n 1 22 LEU n 1 23 LEU n 1 24 GLY n 1 25 MET n 1 26 LYS n 1 27 LYS n 1 28 ARG n 1 29 GLY n 1 30 PHE n 1 31 GLY n 1 32 ALA n 1 33 GLY n 1 34 ARG n 1 35 TRP n 1 36 ASN n 1 37 GLY n 1 38 PHE n 1 39 GLY n 1 40 GLY n 1 41 LYS n 1 42 VAL n 1 43 GLN n 1 44 GLU n 1 45 GLY n 1 46 GLU n 1 47 THR n 1 48 ILE n 1 49 GLU n 1 50 ASP n 1 51 GLY n 1 52 ALA n 1 53 ARG n 1 54 ARG n 1 55 GLU n 1 56 LEU n 1 57 GLN n 1 58 GLU n 1 59 GLU n 1 60 SER n 1 61 GLY n 1 62 LEU n 1 63 THR n 1 64 VAL n 1 65 ASP n 1 66 ALA n 1 67 LEU n 1 68 HIS n 1 69 LYS n 1 70 VAL n 1 71 GLY n 1 72 GLN n 1 73 ILE n 1 74 VAL n 1 75 PHE n 1 76 GLU n 1 77 PHE n 1 78 VAL n 1 79 GLY n 1 80 GLU n 1 81 PRO n 1 82 GLU n 1 83 LEU n 1 84 MET n 1 85 ASP n 1 86 VAL n 1 87 HIS n 1 88 VAL n 1 89 PHE n 1 90 CYS n 1 91 THR n 1 92 ASP n 1 93 SER n 1 94 ILE n 1 95 GLN n 1 96 GLY n 1 97 THR n 1 98 PRO n 1 99 VAL n 1 100 GLU n 1 101 SER n 1 102 ASP n 1 103 GLU n 1 104 MET n 1 105 ARG n 1 106 PRO n 1 107 CYS n 1 108 TRP n 1 109 PHE n 1 110 GLN n 1 111 LEU n 1 112 ASP n 1 113 GLN n 1 114 ILE n 1 115 PRO n 1 116 PHE n 1 117 LYS n 1 118 ASP n 1 119 MET n 1 120 TRP n 1 121 PRO n 1 122 ASP n 1 123 ASP n 1 124 SER n 1 125 TYR n 1 126 TRP n 1 127 PHE n 1 128 PRO n 1 129 LEU n 1 130 LEU n 1 131 LEU n 1 132 GLN n 1 133 LYS n 1 134 LYS n 1 135 LYS n 1 136 PHE n 1 137 HIS n 1 138 GLY n 1 139 TYR n 1 140 PHE n 1 141 LYS n 1 142 PHE n 1 143 GLN n 1 144 GLY n 1 145 GLN n 1 146 ASP n 1 147 THR n 1 148 ILE n 1 149 LEU n 1 150 ASP n 1 151 TYR n 1 152 THR n 1 153 LEU n 1 154 ARG n 1 155 GLU n 1 156 VAL n 1 157 ASP n 1 158 THR n 1 159 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 159 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NUDT1, MTH1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8DG non-polymer . "8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 GLY 5 2 ? ? ? A . n A 1 6 ALA 6 3 3 ALA ALA A . n A 1 7 SER 7 4 4 SER SER A . n A 1 8 ARG 8 5 5 ARG ARG A . n A 1 9 LEU 9 6 6 LEU LEU A . n A 1 10 TYR 10 7 7 TYR TYR A . n A 1 11 THR 11 8 8 THR THR A . n A 1 12 LEU 12 9 9 LEU LEU A . n A 1 13 VAL 13 10 10 VAL VAL A . n A 1 14 LEU 14 11 11 LEU LEU A . n A 1 15 VAL 15 12 12 VAL VAL A . n A 1 16 LEU 16 13 13 LEU LEU A . n A 1 17 GLN 17 14 14 GLN GLN A . n A 1 18 PRO 18 15 15 PRO PRO A . n A 1 19 GLN 19 16 16 GLN GLN A . n A 1 20 ARG 20 17 17 ARG ARG A . n A 1 21 VAL 21 18 18 VAL VAL A . n A 1 22 LEU 22 19 19 LEU LEU A . n A 1 23 LEU 23 20 20 LEU LEU A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 MET 25 22 22 MET MET A . n A 1 26 LYS 26 23 23 LYS LYS A . n A 1 27 LYS 27 24 24 LYS LYS A . n A 1 28 ARG 28 25 25 ARG ARG A . n A 1 29 GLY 29 26 26 GLY GLY A . n A 1 30 PHE 30 27 27 PHE PHE A . n A 1 31 GLY 31 28 28 GLY GLY A . n A 1 32 ALA 32 29 29 ALA ALA A . n A 1 33 GLY 33 30 30 GLY GLY A . n A 1 34 ARG 34 31 31 ARG ARG A . n A 1 35 TRP 35 32 32 TRP TRP A . n A 1 36 ASN 36 33 33 ASN ASN A . n A 1 37 GLY 37 34 34 GLY GLY A . n A 1 38 PHE 38 35 35 PHE PHE A . n A 1 39 GLY 39 36 36 GLY GLY A . n A 1 40 GLY 40 37 37 GLY GLY A . n A 1 41 LYS 41 38 38 LYS LYS A . n A 1 42 VAL 42 39 39 VAL VAL A . n A 1 43 GLN 43 40 40 GLN GLN A . n A 1 44 GLU 44 41 41 GLU GLU A . n A 1 45 GLY 45 42 42 GLY GLY A . n A 1 46 GLU 46 43 43 GLU GLU A . n A 1 47 THR 47 44 44 THR THR A . n A 1 48 ILE 48 45 45 ILE ILE A . n A 1 49 GLU 49 46 46 GLU GLU A . n A 1 50 ASP 50 47 47 ASP ASP A . n A 1 51 GLY 51 48 48 GLY GLY A . n A 1 52 ALA 52 49 49 ALA ALA A . n A 1 53 ARG 53 50 50 ARG ARG A . n A 1 54 ARG 54 51 51 ARG ARG A . n A 1 55 GLU 55 52 52 GLU GLU A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 GLN 57 54 54 GLN GLN A . n A 1 58 GLU 58 55 55 GLU GLU A . n A 1 59 GLU 59 56 56 GLU GLU A . n A 1 60 SER 60 57 57 SER SER A . n A 1 61 GLY 61 58 58 GLY GLY A . n A 1 62 LEU 62 59 59 LEU LEU A . n A 1 63 THR 63 60 60 THR THR A . n A 1 64 VAL 64 61 61 VAL VAL A . n A 1 65 ASP 65 62 62 ASP ASP A . n A 1 66 ALA 66 63 63 ALA ALA A . n A 1 67 LEU 67 64 64 LEU LEU A . n A 1 68 HIS 68 65 65 HIS HIS A . n A 1 69 LYS 69 66 66 LYS LYS A . n A 1 70 VAL 70 67 67 VAL VAL A . n A 1 71 GLY 71 68 68 GLY GLY A . n A 1 72 GLN 72 69 69 GLN GLN A . n A 1 73 ILE 73 70 70 ILE ILE A . n A 1 74 VAL 74 71 71 VAL VAL A . n A 1 75 PHE 75 72 72 PHE PHE A . n A 1 76 GLU 76 73 73 GLU GLU A . n A 1 77 PHE 77 74 74 PHE PHE A . n A 1 78 VAL 78 75 75 VAL VAL A . n A 1 79 GLY 79 76 76 GLY GLY A . n A 1 80 GLU 80 77 77 GLU GLU A . n A 1 81 PRO 81 78 78 PRO PRO A . n A 1 82 GLU 82 79 79 GLU GLU A . n A 1 83 LEU 83 80 80 LEU LEU A . n A 1 84 MET 84 81 81 MET MET A . n A 1 85 ASP 85 82 82 ASP ASP A . n A 1 86 VAL 86 83 83 VAL VAL A . n A 1 87 HIS 87 84 84 HIS HIS A . n A 1 88 VAL 88 85 85 VAL VAL A . n A 1 89 PHE 89 86 86 PHE PHE A . n A 1 90 CYS 90 87 87 CYS CYS A . n A 1 91 THR 91 88 88 THR THR A . n A 1 92 ASP 92 89 89 ASP ASP A . n A 1 93 SER 93 90 90 SER SER A . n A 1 94 ILE 94 91 91 ILE ILE A . n A 1 95 GLN 95 92 92 GLN GLN A . n A 1 96 GLY 96 93 93 GLY GLY A . n A 1 97 THR 97 94 94 THR THR A . n A 1 98 PRO 98 95 95 PRO PRO A . n A 1 99 VAL 99 96 96 VAL VAL A . n A 1 100 GLU 100 97 97 GLU GLU A . n A 1 101 SER 101 98 98 SER SER A . n A 1 102 ASP 102 99 99 ASP ASP A . n A 1 103 GLU 103 100 100 GLU GLU A . n A 1 104 MET 104 101 101 MET MET A . n A 1 105 ARG 105 102 102 ARG ARG A . n A 1 106 PRO 106 103 103 PRO PRO A . n A 1 107 CYS 107 104 104 CYS CYS A . n A 1 108 TRP 108 105 105 TRP TRP A . n A 1 109 PHE 109 106 106 PHE PHE A . n A 1 110 GLN 110 107 107 GLN GLN A . n A 1 111 LEU 111 108 108 LEU LEU A . n A 1 112 ASP 112 109 109 ASP ASP A . n A 1 113 GLN 113 110 110 GLN GLN A . n A 1 114 ILE 114 111 111 ILE ILE A . n A 1 115 PRO 115 112 112 PRO PRO A . n A 1 116 PHE 116 113 113 PHE PHE A . n A 1 117 LYS 117 114 114 LYS LYS A . n A 1 118 ASP 118 115 115 ASP ASP A . n A 1 119 MET 119 116 116 MET MET A . n A 1 120 TRP 120 117 117 TRP TRP A . n A 1 121 PRO 121 118 118 PRO PRO A . n A 1 122 ASP 122 119 119 ASP ASP A . n A 1 123 ASP 123 120 120 ASP ASP A . n A 1 124 SER 124 121 121 SER SER A . n A 1 125 TYR 125 122 122 TYR TYR A . n A 1 126 TRP 126 123 123 TRP TRP A . n A 1 127 PHE 127 124 124 PHE PHE A . n A 1 128 PRO 128 125 125 PRO PRO A . n A 1 129 LEU 129 126 126 LEU LEU A . n A 1 130 LEU 130 127 127 LEU LEU A . n A 1 131 LEU 131 128 128 LEU LEU A . n A 1 132 GLN 132 129 129 GLN GLN A . n A 1 133 LYS 133 130 130 LYS LYS A . n A 1 134 LYS 134 131 131 LYS LYS A . n A 1 135 LYS 135 132 132 LYS LYS A . n A 1 136 PHE 136 133 133 PHE PHE A . n A 1 137 HIS 137 134 134 HIS HIS A . n A 1 138 GLY 138 135 135 GLY GLY A . n A 1 139 TYR 139 136 136 TYR TYR A . n A 1 140 PHE 140 137 137 PHE PHE A . n A 1 141 LYS 141 138 138 LYS LYS A . n A 1 142 PHE 142 139 139 PHE PHE A . n A 1 143 GLN 143 140 140 GLN GLN A . n A 1 144 GLY 144 141 141 GLY GLY A . n A 1 145 GLN 145 142 142 GLN GLN A . n A 1 146 ASP 146 143 143 ASP ASP A . n A 1 147 THR 147 144 144 THR THR A . n A 1 148 ILE 148 145 145 ILE ILE A . n A 1 149 LEU 149 146 146 LEU LEU A . n A 1 150 ASP 150 147 147 ASP ASP A . n A 1 151 TYR 151 148 148 TYR TYR A . n A 1 152 THR 152 149 149 THR THR A . n A 1 153 LEU 153 150 150 LEU LEU A . n A 1 154 ARG 154 151 151 ARG ARG A . n A 1 155 GLU 155 152 152 GLU GLU A . n A 1 156 VAL 156 153 153 VAL VAL A . n A 1 157 ASP 157 154 154 ASP ASP A . n A 1 158 THR 158 155 155 THR THR A . n A 1 159 VAL 159 156 156 VAL VAL A . n B 1 1 GLY 1 -2 ? ? ? B . n B 1 2 SER 2 -1 ? ? ? B . n B 1 3 HIS 3 0 ? ? ? B . n B 1 4 MET 4 1 ? ? ? B . n B 1 5 GLY 5 2 2 GLY GLY B . n B 1 6 ALA 6 3 3 ALA ALA B . n B 1 7 SER 7 4 4 SER SER B . n B 1 8 ARG 8 5 5 ARG ARG B . n B 1 9 LEU 9 6 6 LEU LEU B . n B 1 10 TYR 10 7 7 TYR TYR B . n B 1 11 THR 11 8 8 THR THR B . n B 1 12 LEU 12 9 9 LEU LEU B . n B 1 13 VAL 13 10 10 VAL VAL B . n B 1 14 LEU 14 11 11 LEU LEU B . n B 1 15 VAL 15 12 12 VAL VAL B . n B 1 16 LEU 16 13 13 LEU LEU B . n B 1 17 GLN 17 14 14 GLN GLN B . n B 1 18 PRO 18 15 15 PRO PRO B . n B 1 19 GLN 19 16 16 GLN GLN B . n B 1 20 ARG 20 17 17 ARG ARG B . n B 1 21 VAL 21 18 18 VAL VAL B . n B 1 22 LEU 22 19 19 LEU LEU B . n B 1 23 LEU 23 20 20 LEU LEU B . n B 1 24 GLY 24 21 21 GLY GLY B . n B 1 25 MET 25 22 22 MET MET B . n B 1 26 LYS 26 23 23 LYS LYS B . n B 1 27 LYS 27 24 24 LYS LYS B . n B 1 28 ARG 28 25 25 ARG ARG B . n B 1 29 GLY 29 26 26 GLY GLY B . n B 1 30 PHE 30 27 27 PHE PHE B . n B 1 31 GLY 31 28 28 GLY GLY B . n B 1 32 ALA 32 29 29 ALA ALA B . n B 1 33 GLY 33 30 30 GLY GLY B . n B 1 34 ARG 34 31 31 ARG ARG B . n B 1 35 TRP 35 32 32 TRP TRP B . n B 1 36 ASN 36 33 33 ASN ASN B . n B 1 37 GLY 37 34 34 GLY GLY B . n B 1 38 PHE 38 35 35 PHE PHE B . n B 1 39 GLY 39 36 36 GLY GLY B . n B 1 40 GLY 40 37 37 GLY GLY B . n B 1 41 LYS 41 38 38 LYS LYS B . n B 1 42 VAL 42 39 39 VAL VAL B . n B 1 43 GLN 43 40 40 GLN GLN B . n B 1 44 GLU 44 41 41 GLU GLU B . n B 1 45 GLY 45 42 42 GLY GLY B . n B 1 46 GLU 46 43 43 GLU GLU B . n B 1 47 THR 47 44 44 THR THR B . n B 1 48 ILE 48 45 45 ILE ILE B . n B 1 49 GLU 49 46 46 GLU GLU B . n B 1 50 ASP 50 47 47 ASP ASP B . n B 1 51 GLY 51 48 48 GLY GLY B . n B 1 52 ALA 52 49 49 ALA ALA B . n B 1 53 ARG 53 50 50 ARG ARG B . n B 1 54 ARG 54 51 51 ARG ARG B . n B 1 55 GLU 55 52 52 GLU GLU B . n B 1 56 LEU 56 53 53 LEU LEU B . n B 1 57 GLN 57 54 54 GLN GLN B . n B 1 58 GLU 58 55 55 GLU GLU B . n B 1 59 GLU 59 56 56 GLU GLU B . n B 1 60 SER 60 57 57 SER SER B . n B 1 61 GLY 61 58 58 GLY GLY B . n B 1 62 LEU 62 59 59 LEU LEU B . n B 1 63 THR 63 60 60 THR THR B . n B 1 64 VAL 64 61 61 VAL VAL B . n B 1 65 ASP 65 62 62 ASP ASP B . n B 1 66 ALA 66 63 63 ALA ALA B . n B 1 67 LEU 67 64 64 LEU LEU B . n B 1 68 HIS 68 65 65 HIS HIS B . n B 1 69 LYS 69 66 66 LYS LYS B . n B 1 70 VAL 70 67 67 VAL VAL B . n B 1 71 GLY 71 68 68 GLY GLY B . n B 1 72 GLN 72 69 69 GLN GLN B . n B 1 73 ILE 73 70 70 ILE ILE B . n B 1 74 VAL 74 71 71 VAL VAL B . n B 1 75 PHE 75 72 72 PHE PHE B . n B 1 76 GLU 76 73 73 GLU GLU B . n B 1 77 PHE 77 74 74 PHE PHE B . n B 1 78 VAL 78 75 75 VAL VAL B . n B 1 79 GLY 79 76 76 GLY GLY B . n B 1 80 GLU 80 77 77 GLU GLU B . n B 1 81 PRO 81 78 78 PRO PRO B . n B 1 82 GLU 82 79 79 GLU GLU B . n B 1 83 LEU 83 80 80 LEU LEU B . n B 1 84 MET 84 81 81 MET MET B . n B 1 85 ASP 85 82 82 ASP ASP B . n B 1 86 VAL 86 83 83 VAL VAL B . n B 1 87 HIS 87 84 84 HIS HIS B . n B 1 88 VAL 88 85 85 VAL VAL B . n B 1 89 PHE 89 86 86 PHE PHE B . n B 1 90 CYS 90 87 87 CYS CYS B . n B 1 91 THR 91 88 88 THR THR B . n B 1 92 ASP 92 89 89 ASP ASP B . n B 1 93 SER 93 90 90 SER SER B . n B 1 94 ILE 94 91 91 ILE ILE B . n B 1 95 GLN 95 92 92 GLN GLN B . n B 1 96 GLY 96 93 93 GLY GLY B . n B 1 97 THR 97 94 94 THR THR B . n B 1 98 PRO 98 95 95 PRO PRO B . n B 1 99 VAL 99 96 96 VAL VAL B . n B 1 100 GLU 100 97 97 GLU GLU B . n B 1 101 SER 101 98 98 SER SER B . n B 1 102 ASP 102 99 99 ASP ASP B . n B 1 103 GLU 103 100 100 GLU GLU B . n B 1 104 MET 104 101 101 MET MET B . n B 1 105 ARG 105 102 102 ARG ARG B . n B 1 106 PRO 106 103 103 PRO PRO B . n B 1 107 CYS 107 104 104 CYS CYS B . n B 1 108 TRP 108 105 105 TRP TRP B . n B 1 109 PHE 109 106 106 PHE PHE B . n B 1 110 GLN 110 107 107 GLN GLN B . n B 1 111 LEU 111 108 108 LEU LEU B . n B 1 112 ASP 112 109 109 ASP ASP B . n B 1 113 GLN 113 110 110 GLN GLN B . n B 1 114 ILE 114 111 111 ILE ILE B . n B 1 115 PRO 115 112 112 PRO PRO B . n B 1 116 PHE 116 113 113 PHE PHE B . n B 1 117 LYS 117 114 114 LYS LYS B . n B 1 118 ASP 118 115 115 ASP ASP B . n B 1 119 MET 119 116 116 MET MET B . n B 1 120 TRP 120 117 117 TRP TRP B . n B 1 121 PRO 121 118 118 PRO PRO B . n B 1 122 ASP 122 119 119 ASP ASP B . n B 1 123 ASP 123 120 120 ASP ASP B . n B 1 124 SER 124 121 121 SER SER B . n B 1 125 TYR 125 122 122 TYR TYR B . n B 1 126 TRP 126 123 123 TRP TRP B . n B 1 127 PHE 127 124 124 PHE PHE B . n B 1 128 PRO 128 125 125 PRO PRO B . n B 1 129 LEU 129 126 126 LEU LEU B . n B 1 130 LEU 130 127 127 LEU LEU B . n B 1 131 LEU 131 128 128 LEU LEU B . n B 1 132 GLN 132 129 129 GLN GLN B . n B 1 133 LYS 133 130 130 LYS LYS B . n B 1 134 LYS 134 131 131 LYS LYS B . n B 1 135 LYS 135 132 132 LYS LYS B . n B 1 136 PHE 136 133 133 PHE PHE B . n B 1 137 HIS 137 134 134 HIS HIS B . n B 1 138 GLY 138 135 135 GLY GLY B . n B 1 139 TYR 139 136 136 TYR TYR B . n B 1 140 PHE 140 137 137 PHE PHE B . n B 1 141 LYS 141 138 138 LYS LYS B . n B 1 142 PHE 142 139 139 PHE PHE B . n B 1 143 GLN 143 140 140 GLN GLN B . n B 1 144 GLY 144 141 141 GLY GLY B . n B 1 145 GLN 145 142 142 GLN GLN B . n B 1 146 ASP 146 143 143 ASP ASP B . n B 1 147 THR 147 144 144 THR THR B . n B 1 148 ILE 148 145 145 ILE ILE B . n B 1 149 LEU 149 146 146 LEU LEU B . n B 1 150 ASP 150 147 147 ASP ASP B . n B 1 151 TYR 151 148 148 TYR TYR B . n B 1 152 THR 152 149 149 THR THR B . n B 1 153 LEU 153 150 150 LEU LEU B . n B 1 154 ARG 154 151 151 ARG ARG B . n B 1 155 GLU 155 152 152 GLU GLU B . n B 1 156 VAL 156 153 153 VAL VAL B . n B 1 157 ASP 157 154 154 ASP ASP B . n B 1 158 THR 158 155 155 THR THR B . n B 1 159 VAL 159 156 156 VAL VAL B . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 8DG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 8DG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 8DG 1 201 159 8DG 8DG A . D 2 8DG 1 201 160 8DG 8DG B . E 3 SO4 1 202 4 SO4 SO4 B . F 3 SO4 1 203 5 SO4 SO4 B . G 3 SO4 1 204 6 SO4 SO4 B . H 4 HOH 1 301 1 HOH HOH A . H 4 HOH 2 302 12 HOH HOH A . H 4 HOH 3 303 36 HOH HOH A . H 4 HOH 4 304 34 HOH HOH A . H 4 HOH 5 305 24 HOH HOH A . H 4 HOH 6 306 5 HOH HOH A . H 4 HOH 7 307 10 HOH HOH A . H 4 HOH 8 308 4 HOH HOH A . H 4 HOH 9 309 28 HOH HOH A . H 4 HOH 10 310 15 HOH HOH A . H 4 HOH 11 311 32 HOH HOH A . H 4 HOH 12 312 3 HOH HOH A . H 4 HOH 13 313 6 HOH HOH A . H 4 HOH 14 314 37 HOH HOH A . H 4 HOH 15 315 9 HOH HOH A . H 4 HOH 16 316 29 HOH HOH A . H 4 HOH 17 317 17 HOH HOH A . H 4 HOH 18 318 20 HOH HOH A . H 4 HOH 19 319 14 HOH HOH A . H 4 HOH 20 320 27 HOH HOH A . H 4 HOH 21 321 40 HOH HOH A . H 4 HOH 22 322 31 HOH HOH A . H 4 HOH 23 323 41 HOH HOH A . H 4 HOH 24 324 18 HOH HOH A . H 4 HOH 25 325 35 HOH HOH A . I 4 HOH 1 301 43 HOH HOH B . I 4 HOH 2 302 26 HOH HOH B . I 4 HOH 3 303 42 HOH HOH B . I 4 HOH 4 304 23 HOH HOH B . I 4 HOH 5 305 19 HOH HOH B . I 4 HOH 6 306 11 HOH HOH B . I 4 HOH 7 307 7 HOH HOH B . I 4 HOH 8 308 21 HOH HOH B . I 4 HOH 9 309 2 HOH HOH B . I 4 HOH 10 310 8 HOH HOH B . I 4 HOH 11 311 22 HOH HOH B . I 4 HOH 12 312 16 HOH HOH B . I 4 HOH 13 313 30 HOH HOH B . I 4 HOH 14 314 39 HOH HOH B . I 4 HOH 15 315 38 HOH HOH B . I 4 HOH 16 316 13 HOH HOH B . # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9QUH _cell.details ? _cell.formula_units_Z ? _cell.length_a 59.340 _cell.length_a_esd ? _cell.length_b 67.550 _cell.length_b_esd ? _cell.length_c 80.110 _cell.length_c_esd ? _cell.volume 321114.286 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9QUH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9QUH _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON CRYSTALLOGRAPHY' _exptl.method_details ? # _reflns.B_iso_Wilson_estimate 30.20 _reflns.entry_id 9QUH _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high ? _reflns.d_resolution_low ? _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs ? _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs ? _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 32.57 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9QUH _refine.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.32 _refine.ls_d_res_low 29.35 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 20912 _refine.ls_number_reflns_R_free 1049 _refine.ls_number_reflns_R_work 19863 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 77.69 _refine.ls_percent_reflns_R_free 5.02 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2065 _refine.ls_R_factor_R_free 0.2624 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2036 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details 'Ramdom selection' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 27.1825 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3515 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON CRYSTALLOGRAPHY' ? 0.0020 ? 2665 ? f_bond_d ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.4892 ? 3623 ? f_angle_d ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.0426 ? 371 ? f_chiral_restr ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.0024 ? 459 ? f_plane_restr ? ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 16.2853 ? 357 ? f_dihedral_angle_d ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'ELECTRON CRYSTALLOGRAPHY' 2.32 2.44 . . 81 1595 43.52 . . . . 0.3046 . . . . . . . . . . . . . . . 0.3914 'ELECTRON CRYSTALLOGRAPHY' 2.44 2.59 . . 95 1777 48.92 . . . . 0.2928 . . . . . . . . . . . . . . . 0.3902 'ELECTRON CRYSTALLOGRAPHY' 2.60 2.80 . . 139 2634 72.52 . . . . 0.3024 . . . . . . . . . . . . . . . 0.3578 'ELECTRON CRYSTALLOGRAPHY' 2.80 3.08 . . 174 3335 91.31 . . . . 0.2564 . . . . . . . . . . . . . . . 0.3329 'ELECTRON CRYSTALLOGRAPHY' 3.08 3.52 . . 190 3513 96.18 . . . . 0.2087 . . . . . . . . . . . . . . . 0.2895 'ELECTRON CRYSTALLOGRAPHY' 3.52 4.43 . . 185 3507 96.10 . . . . 0.1511 . . . . . . . . . . . . . . . 0.2183 'ELECTRON CRYSTALLOGRAPHY' 4.43 29.35 . . 185 3502 95.79 . . . . 0.1733 . . . . . . . . . . . . . . . 0.1913 # _struct.entry_id 9QUH _struct.title 'Structure of human MTH1 in complex with 8DG by MicroED using high electron fluence' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9QUH _struct_keywords.text 'serial electron diffraction, SerialED, MicroED, MTH1, 8DG, Hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code 8ODP_HUMAN _struct_ref.pdbx_db_accession P36639 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPEL MDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV ; _struct_ref.pdbx_align_begin 42 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9QUH A 4 ? 159 ? P36639 42 ? 197 ? 1 156 2 1 9QUH B 4 ? 159 ? P36639 42 ? 197 ? 1 156 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9QUH GLY A 1 ? UNP P36639 ? ? 'expression tag' -2 1 1 9QUH SER A 2 ? UNP P36639 ? ? 'expression tag' -1 2 1 9QUH HIS A 3 ? UNP P36639 ? ? 'expression tag' 0 3 2 9QUH GLY B 1 ? UNP P36639 ? ? 'expression tag' -2 4 2 9QUH SER B 2 ? UNP P36639 ? ? 'expression tag' -1 5 2 9QUH HIS B 3 ? UNP P36639 ? ? 'expression tag' 0 6 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,H 2 1 B,D,E,F,G,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 47 ? GLY A 61 ? THR A 44 GLY A 58 1 ? 15 HELX_P HELX_P2 AA2 PRO A 115 ? MET A 119 ? PRO A 112 MET A 116 5 ? 5 HELX_P HELX_P3 AA3 ASP A 122 ? GLN A 132 ? ASP A 119 GLN A 129 1 ? 11 HELX_P HELX_P4 AA4 THR B 47 ? GLY B 61 ? THR B 44 GLY B 58 1 ? 15 HELX_P HELX_P5 AA5 ASP B 112 ? ILE B 114 ? ASP B 109 ILE B 111 5 ? 3 HELX_P HELX_P6 AA6 PRO B 115 ? MET B 119 ? PRO B 112 MET B 116 5 ? 5 HELX_P HELX_P7 AA7 ASP B 122 ? GLN B 132 ? ASP B 119 GLN B 129 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 14 ? AA2 ? 14 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA1 5 6 ? parallel AA1 6 7 ? anti-parallel AA1 7 8 ? parallel AA1 8 9 ? anti-parallel AA1 9 10 ? parallel AA1 10 11 ? anti-parallel AA1 11 12 ? parallel AA1 12 13 ? anti-parallel AA1 13 14 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? anti-parallel AA2 5 6 ? parallel AA2 6 7 ? anti-parallel AA2 7 8 ? parallel AA2 8 9 ? anti-parallel AA2 9 10 ? parallel AA2 10 11 ? anti-parallel AA2 11 12 ? parallel AA2 12 13 ? anti-parallel AA2 13 14 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TRP A 35 ? ASN A 36 ? TRP A 32 ASN A 33 AA1 2 ARG A 20 ? MET A 25 ? ARG A 17 MET A 22 AA1 3 SER A 7 ? GLN A 17 ? SER A 4 GLN A 14 AA1 4 LEU A 83 ? THR A 91 ? LEU A 80 THR A 88 AA1 5 HIS A 68 ? PHE A 77 ? HIS A 65 PHE A 74 AA1 6 PHE A 136 ? PHE A 142 ? PHE A 133 PHE A 139 AA1 7 ILE A 148 ? GLU A 155 ? ILE A 145 GLU A 152 AA1 8 ILE B 148 ? GLU B 155 ? ILE B 145 GLU B 152 AA1 9 PHE B 136 ? PHE B 142 ? PHE B 133 PHE B 139 AA1 10 HIS B 68 ? PHE B 77 ? HIS B 65 PHE B 74 AA1 11 GLU B 80 ? THR B 91 ? GLU B 77 THR B 88 AA1 12 SER B 7 ? LEU B 16 ? SER B 4 LEU B 13 AA1 13 ARG B 20 ? LYS B 26 ? ARG B 17 LYS B 23 AA1 14 TRP B 35 ? ASN B 36 ? TRP B 32 ASN B 33 AA2 1 PRO A 106 ? GLN A 110 ? PRO A 103 GLN A 107 AA2 2 ARG A 20 ? MET A 25 ? ARG A 17 MET A 22 AA2 3 SER A 7 ? GLN A 17 ? SER A 4 GLN A 14 AA2 4 LEU A 83 ? THR A 91 ? LEU A 80 THR A 88 AA2 5 HIS A 68 ? PHE A 77 ? HIS A 65 PHE A 74 AA2 6 PHE A 136 ? PHE A 142 ? PHE A 133 PHE A 139 AA2 7 ILE A 148 ? GLU A 155 ? ILE A 145 GLU A 152 AA2 8 ILE B 148 ? GLU B 155 ? ILE B 145 GLU B 152 AA2 9 PHE B 136 ? PHE B 142 ? PHE B 133 PHE B 139 AA2 10 HIS B 68 ? PHE B 77 ? HIS B 65 PHE B 74 AA2 11 GLU B 80 ? THR B 91 ? GLU B 77 THR B 88 AA2 12 SER B 7 ? LEU B 16 ? SER B 4 LEU B 13 AA2 13 ARG B 20 ? LYS B 26 ? ARG B 17 LYS B 23 AA2 14 MET B 104 ? GLN B 110 ? MET B 101 GLN B 107 AA3 1 THR A 63 ? VAL A 64 ? THR A 60 VAL A 61 AA3 2 ILE A 94 ? GLN A 95 ? ILE A 91 GLN A 92 AA4 1 THR B 63 ? VAL B 64 ? THR B 60 VAL B 61 AA4 2 ILE B 94 ? GLN B 95 ? ILE B 91 GLN B 92 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ASN A 36 ? O ASN A 33 N GLY A 24 ? N GLY A 21 AA1 2 3 O ARG A 20 ? O ARG A 17 N GLN A 17 ? N GLN A 14 AA1 3 4 N LEU A 12 ? N LEU A 9 O PHE A 89 ? O PHE A 86 AA1 4 5 O VAL A 86 ? O VAL A 83 N ILE A 73 ? N ILE A 70 AA1 5 6 N GLU A 76 ? N GLU A 73 O PHE A 142 ? O PHE A 139 AA1 6 7 N HIS A 137 ? N HIS A 134 O ARG A 154 ? O ARG A 151 AA1 7 8 N LEU A 153 ? N LEU A 150 O GLU B 155 ? O GLU B 152 AA1 8 9 O LEU B 149 ? O LEU B 146 N LYS B 141 ? N LYS B 138 AA1 9 10 O PHE B 142 ? O PHE B 139 N GLU B 76 ? N GLU B 73 AA1 10 11 N GLY B 71 ? N GLY B 68 O VAL B 88 ? O VAL B 85 AA1 11 12 O ASP B 85 ? O ASP B 82 N ARG B 8 ? N ARG B 5 AA1 12 13 N VAL B 15 ? N VAL B 12 O LEU B 22 ? O LEU B 19 AA1 13 14 N GLY B 24 ? N GLY B 21 O ASN B 36 ? O ASN B 33 AA2 1 2 O CYS A 107 ? O CYS A 104 N LEU A 23 ? N LEU A 20 AA2 2 3 O ARG A 20 ? O ARG A 17 N GLN A 17 ? N GLN A 14 AA2 3 4 N LEU A 12 ? N LEU A 9 O PHE A 89 ? O PHE A 86 AA2 4 5 O VAL A 86 ? O VAL A 83 N ILE A 73 ? N ILE A 70 AA2 5 6 N GLU A 76 ? N GLU A 73 O PHE A 142 ? O PHE A 139 AA2 6 7 N HIS A 137 ? N HIS A 134 O ARG A 154 ? O ARG A 151 AA2 7 8 N LEU A 153 ? N LEU A 150 O GLU B 155 ? O GLU B 152 AA2 8 9 O LEU B 149 ? O LEU B 146 N LYS B 141 ? N LYS B 138 AA2 9 10 O PHE B 142 ? O PHE B 139 N GLU B 76 ? N GLU B 73 AA2 10 11 N GLY B 71 ? N GLY B 68 O VAL B 88 ? O VAL B 85 AA2 11 12 O ASP B 85 ? O ASP B 82 N ARG B 8 ? N ARG B 5 AA2 12 13 N VAL B 15 ? N VAL B 12 O LEU B 22 ? O LEU B 19 AA2 13 14 N VAL B 21 ? N VAL B 18 O PHE B 109 ? O PHE B 106 AA3 1 2 N THR A 63 ? N THR A 60 O GLN A 95 ? O GLN A 92 AA4 1 2 N THR B 63 ? N THR B 60 O GLN B 95 ? O GLN B 92 # _pdbx_entry_details.entry_id 9QUH _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 302 ? ? O A HOH 308 ? ? 2.10 2 1 O A HOH 310 ? ? O A HOH 322 ? ? 2.18 3 1 NZ A LYS 66 ? ? O A HOH 301 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 57 ? ? -144.57 -3.30 2 1 GLN A 142 ? ? -146.49 -5.62 3 1 ASP B 89 ? ? -130.40 -34.77 4 1 ASP B 143 ? ? -140.84 -13.95 5 1 THR B 155 ? ? -172.78 102.83 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'ELECTRON CRYSTALLOGRAPHY' ? refined -4.3391578133 -5.5109443823 -11.5730425153 0.262347877923 ? 0.0591943638241 ? 0.00448255952895 ? 0.0929057727538 ? -0.0796767159481 ? 0.257200560673 ? 1.21203612498 ? 0.0687432696707 ? 0.154762086365 ? 0.174427684648 ? 0.341183214262 ? 0.668675499389 ? -0.0112872764881 ? 0.0115893521286 ? -0.0238853644258 ? -0.146839423977 ? 0.0152313655089 ? 0.108052636835 ? -0.0883508859516 ? -0.0427911586341 ? -0.38043109939 ? 2 'ELECTRON CRYSTALLOGRAPHY' ? refined -0.273676992893 -19.0622251294 -13.4475722153 0.27509942033 ? -0.0641923509099 ? -0.082129074276 ? 0.128187056274 ? 0.0280147931739 ? 0.183749871029 ? 1.2585143639 ? -0.577690306962 ? -0.0375594345496 ? 2.05003278096 ? -0.662281065166 ? 4.23221097646 ? 0.0138832680058 ? -0.0408500089403 ? -0.00791770947876 ? -0.00313743826582 ? -0.0824926712859 ? -0.259327027867 ? -0.0259006859373 ? -0.384087518627 ? -0.0277385516579 ? 3 'ELECTRON CRYSTALLOGRAPHY' ? refined -11.8057051795 -9.4508300306 -9.444306027 0.287082963286 ? 0.0199900734908 ? -0.0859156978973 ? 0.178109156527 ? -0.0329451699627 ? 0.162928694535 ? 3.08091136284 ? -0.144354942971 ? -0.682118909416 ? 3.82368655049 ? 0.881767628399 ? 0.443146919563 ? -0.298619834404 ? -0.135366027485 ? 0.381899981175 ? -0.0582236380332 ? -0.04153151968 ? 0.398061225244 ? 0.00825403540218 ? -0.161809740429 ? 0.103637090316 ? 4 'ELECTRON CRYSTALLOGRAPHY' ? refined -2.36339987983 -7.925322808 -6.86689945745 0.321656383052 ? 0.00838991942916 ? 0.00739022330851 ? 0.249360701744 ? 0.0558819495667 ? 0.20649590607 ? 2.08469415972 ? 1.14898518462 ? 0.110354361482 ? 0.982682344244 ? 0.534322626546 ? 0.739723020265 ? 0.278736911131 ? -0.506553901716 ? 0.00416582497091 ? 0.254619227269 ? -0.329476211227 ? 0.215098193649 ? 0.188705979608 ? 0.205439279007 ? 0.0328557201663 ? 5 'ELECTRON CRYSTALLOGRAPHY' ? refined -1.41421257823 -2.619896361 -14.1137638116 0.200312406892 ? 0.0242040460746 ? -0.0174230336498 ? 0.0350674772135 ? 0.0331079928577 ? 0.183521204736 ? 0.813017617496 ? 0.412817928463 ? -0.407371224792 ? 1.48977851636 ? -0.405739978448 ? 0.683699015778 ? -0.0512778685006 ? -0.0599074839929 ? -0.0679406410152 ? -0.00222954895802 ? 0.0459027468551 ? 0.0318343436702 ? 0.192491228408 ? 0.0178237181458 ? 0.109683373776 ? 6 'ELECTRON CRYSTALLOGRAPHY' ? refined -5.07901436195 -23.2807692323 -9.41803460217 0.308556981678 ? -0.0213079282766 ? 0.0393780483301 ? 0.118973811877 ? 0.0241901424075 ? 0.166571524744 ? 3.60837969731 ? -0.21803581327 ? -0.600995474048 ? 1.37013771336 ? 1.12626810289 ? 1.72709896484 ? 0.00191874227534 ? -0.325795874691 ? -0.392058489756 ? 0.181713783997 ? 0.216682532887 ? 0.0236457115021 ? 0.31039702734 ? -0.0653332731941 ? -0.0918395716649 ? 7 'ELECTRON CRYSTALLOGRAPHY' ? refined 8.74995973712 -18.0007887045 -14.3000564338 0.360465476647 ? -0.00473154243111 ? -0.0486840100268 ? 0.152837689798 ? -0.0102556736491 ? 0.075354958748 ? 0.757575868204 ? -0.0547119372655 ? 0.481930463862 ? 0.0338299192468 ? -0.235154030446 ? 1.65580465304 ? 0.0746973853444 ? -0.107702772681 ? -0.101190510434 ? 0.0773958053159 ? -0.00161828376796 ? -0.017164093511 ? 0.342799788789 ? 0.106969083613 ? -0.115649635636 ? 8 'ELECTRON CRYSTALLOGRAPHY' ? refined 9.31632065722 -10.6678560679 -5.58520373658 0.226729950124 ? -0.00815518631373 ? 0.0044576778127 ? 0.174295444371 ? 0.0634136357327 ? 0.169811355527 ? 5.78742329627 ? -0.696562415583 ? -2.34315949519 ? 3.32521446093 ? 0.686934176246 ? 2.53974282729 ? -0.165667586682 ? -0.126871915302 ? -0.339071281242 ? 0.679671523815 ? -0.215434673564 ? -0.00140792599822 ? 0.139598051017 ? 0.099236592295 ? 0.313428178741 ? 9 'ELECTRON CRYSTALLOGRAPHY' ? refined 7.28150091671 -3.43318022753 -17.9051107612 0.244201027799 ? 0.0273143557766 ? 0.020187337088 ? 0.163249631145 ? -0.0109471689795 ? 0.0796511025264 ? 2.82540622852 ? 0.169160191441 ? 0.787743358099 ? 1.91693013403 ? 1.20348788731 ? 1.17445365307 ? -0.18924367012 ? 0.313110904888 ? 0.00747648407102 ? -0.252459433873 ? 0.0375375287171 ? 0.0278541354002 ? 0.26698959876 ? -0.201902046018 ? -0.0326849697306 ? 10 'ELECTRON CRYSTALLOGRAPHY' ? refined 10.3090167733 -1.09720656336 -9.59704229836 0.215815568387 ? -0.0585270316385 ? -0.112099621951 ? 0.117455724836 ? 0.0691257112459 ? 0.173295900951 ? 1.13501377182 ? -0.187508697929 ? 0.297084362546 ? 1.22498185984 ? 0.156752015667 ? 5.14900417384 ? 0.16438088682 ? -0.180857647188 ? -0.0933170625085 ? 0.3290303529 ? -0.151990540965 ? -0.154928924389 ? 0.102398004832 ? -0.115915029824 ? -0.291687502384 ? 11 'ELECTRON CRYSTALLOGRAPHY' ? refined 33.2132416723 6.29208727863 -11.2962565064 0.199646253501 ? 0.00669534130529 ? -0.000306628699636 ? 0.292712112018 ? -0.182847474636 ? 0.32001939308 ? 1.03988443823 ? -0.883099842321 ? -0.989126476361 ? 4.45667443566 ? 1.73951188446 ? 3.65798266714 ? -0.00899397121525 ? -0.109757827792 ? -0.0363671664279 ? -0.591749568673 ? 0.0466623845397 ? -0.204906342616 ? -0.143041613435 ? 0.137006741922 ? -0.649491178934 ? 12 'ELECTRON CRYSTALLOGRAPHY' ? refined 28.1077845193 19.4797249642 -7.93326714714 0.231904093369 ? 0.00976910222506 ? -0.00716470802486 ? 0.323463559361 ? -0.174799758473 ? 0.47574916205 ? 1.95026075649 ? -2.22472909518 ? -0.407021418108 ? 5.19176891516 ? 2.00270057263 ? 3.98345120462 ? 0.150704580826 ? -0.486982582406 ? 0.765301662212 ? -0.259059960853 ? -0.213107428535 ? -0.0499632691644 ? -0.0365293648187 ? -0.196828058855 ? -0.0888084587731 ? 13 'ELECTRON CRYSTALLOGRAPHY' ? refined 39.6562078758 9.54797721006 -6.11093995063 0.172320117933 ? -0.0246529330303 ? 0.0632574567841 ? 0.142272673491 ? -0.0172920286437 ? 0.361254392108 ? 3.22627265504 ? -3.19107280715 ? -0.73800814341 ? 6.41513948378 ? 1.98441391182 ? 1.78001986688 ? -0.134636155622 ? -0.1507725512 ? 0.0847847200861 ? -0.284681303526 ? 0.249914041598 ? 0.126970459322 ? 0.0184686367118 ? 0.183705372214 ? -0.128619900583 ? 14 'ELECTRON CRYSTALLOGRAPHY' ? refined 30.321382705 6.79078236403 -5.83016156421 0.208358319346 ? -0.0585975449405 ? 0.0493647591937 ? 0.328747943214 ? -0.0889956305205 ? 0.329537966606 ? 3.42653532828 ? 0.618126105896 ? 0.605191733437 ? 3.20277405845 ? 0.0941677626957 ? 0.873346010131 ? 0.449841856055 ? -0.57957203678 ? -0.185631226512 ? 0.528507940662 ? -0.115157996984 ? -0.0289812684852 ? 0.208025735554 ? -0.0462952556526 ? -0.160154366596 ? 15 'ELECTRON CRYSTALLOGRAPHY' ? refined 30.5404991747 5.11416629265 -14.6815550862 0.193844995671 ? 0.0793493107464 ? 0.046948620788 ? 0.133131646056 ? -0.0569732754571 ? 0.257428533907 ? 2.57761225759 ? 0.0699774724033 ? 0.821925938267 ? 2.79788158035 ? 1.15848170825 ? 8.09750535952 ? 0.312741337693 ? 0.0563564906658 ? -0.028787806496 ? -0.275336350648 ? -0.115206444664 ? -0.0302850429703 ? -0.489248285759 ? -0.182933548776 ? -0.0137334529493 ? 16 'ELECTRON CRYSTALLOGRAPHY' ? refined 30.0969566333 21.9201735673 -1.61340319773 0.214158192326 ? 0.0234423858211 ? 0.037896358876 ? 0.398695782522 ? -0.284835247907 ? 0.605782151955 ? 1.25300814003 ? -0.979465342169 ? 0.12056687953 ? 0.770146133456 ? -0.112957844759 ? 0.112522853708 ? 0.000663136545096 ? -0.32671472366 ? 0.58592097492 ? 0.0102947464426 ? 0.121363265511 ? -0.491872746534 ? -0.0972071745829 ? 0.179740229698 ? -0.223376161936 ? 17 'ELECTRON CRYSTALLOGRAPHY' ? refined 20.5960993556 19.0836367183 -12.3933959116 0.324537961141 ? 0.0190722237927 ? 0.0049746147382 ? 0.206809046339 ? -0.182460617031 ? 0.437080403952 ? 0.148455707352 ? -0.29274986387 ? -0.183903613865 ? 2.21206371005 ? 0.833681808169 ? 1.61045541566 ? 0.0201185544698 ? -0.00776633832751 ? 0.0296895098872 ? -0.103764827018 ? -0.0185308052706 ? 0.0460941302055 ? -0.354699088609 ? -0.0565773645788 ? -0.197065237894 ? 18 'ELECTRON CRYSTALLOGRAPHY' ? refined 19.7214926019 5.67729489985 -11.8562612427 0.131718164876 ? 0.0052560236224 ? -0.0166497334905 ? 0.154440588671 ? -0.00231701822362 ? 0.259712504305 ? 5.208448434 ? 0.0176150085366 ? 0.32906024075 ? 5.72116068628 ? -0.813276419871 ? 6.30945309378 ? 0.199586094273 ? -0.382953401672 ? 0.106769440897 ? -0.0668547945403 ? -0.0272062797605 ? 0.204450661231 ? -0.0336504500474 ? -0.144306359878 ? -0.200009958007 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'ELECTRON CRYSTALLOGRAPHY' 1 A 1 A 3 ? A 10 A 12 ? ? ;chain 'A' and (resid 3 through 12 ) ; 2 'ELECTRON CRYSTALLOGRAPHY' 2 A 11 A 13 ? A 32 A 34 ? ? ;chain 'A' and (resid 13 through 34 ) ; 3 'ELECTRON CRYSTALLOGRAPHY' 3 A 33 A 35 ? A 55 A 57 ? ? ;chain 'A' and (resid 35 through 57 ) ; 4 'ELECTRON CRYSTALLOGRAPHY' 4 A 56 A 58 ? A 72 A 74 ? ? ;chain 'A' and (resid 58 through 74 ) ; 5 'ELECTRON CRYSTALLOGRAPHY' 5 A 73 A 75 ? A 86 A 88 ? ? ;chain 'A' and (resid 75 through 88 ) ; 6 'ELECTRON CRYSTALLOGRAPHY' 6 A 87 A 89 ? A 105 A 107 ? ? ;chain 'A' and (resid 89 through 107 ) ; 7 'ELECTRON CRYSTALLOGRAPHY' 7 A 106 A 108 ? A 117 A 119 ? ? ;chain 'A' and (resid 108 through 119 ) ; 8 'ELECTRON CRYSTALLOGRAPHY' 8 A 118 A 120 ? A 130 A 132 ? ? ;chain 'A' and (resid 120 through 132 ) ; 9 'ELECTRON CRYSTALLOGRAPHY' 9 A 131 A 133 ? A 141 A 143 ? ? ;chain 'A' and (resid 133 through 143 ) ; 10 'ELECTRON CRYSTALLOGRAPHY' 10 A 142 A 144 ? A 154 A 156 ? ? ;chain 'A' and (resid 144 through 156 ) ; 11 'ELECTRON CRYSTALLOGRAPHY' 11 C 1 B 2 ? C 11 B 12 ? ? ;chain 'B' and (resid 2 through 12 ) ; 12 'ELECTRON CRYSTALLOGRAPHY' 12 C 12 B 13 ? C 32 B 33 ? ? ;chain 'B' and (resid 13 through 33 ) ; 13 'ELECTRON CRYSTALLOGRAPHY' 13 C 33 B 34 ? C 56 B 57 ? ? ;chain 'B' and (resid 34 through 57 ) ; 14 'ELECTRON CRYSTALLOGRAPHY' 14 C 57 B 58 ? C 73 B 74 ? ? ;chain 'B' and (resid 58 through 74 ) ; 15 'ELECTRON CRYSTALLOGRAPHY' 15 C 74 B 75 ? C 87 B 88 ? ? ;chain 'B' and (resid 75 through 88 ) ; 16 'ELECTRON CRYSTALLOGRAPHY' 16 C 88 B 89 ? C 109 B 110 ? ? ;chain 'B' and (resid 89 through 110 ) ; 17 'ELECTRON CRYSTALLOGRAPHY' 17 C 110 B 111 ? C 116 B 117 ? ? ;chain 'B' and (resid 111 through 117 ) ; 18 'ELECTRON CRYSTALLOGRAPHY' 18 C 117 B 118 ? C 155 B 156 ? ? ;chain 'B' and (resid 118 through 156 ) ; # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9QUH _em_3d_fitting.method ? _em_3d_fitting.target_criteria Maximum-likelihood _em_3d_fitting.details ? _em_3d_fitting.overall_b_value 29.72 _em_3d_fitting.ref_space RECIPROCAL _em_3d_fitting.ref_protocol OTHER # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id 3ZR1 _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 3ZR1 _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 9QUH _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.32 _em_3d_reconstruction.resolution_method 'DIFFRACTION PATTERN/LAYERLINES' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type '3D CRYSTAL' # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ;Crystals were produced by adding 1 part of precipitant mix (30% PEG-6k, 0.16 M Li2SO4, 0.1 M sodium acetate, pH 4) to 1 part of protein solution (14 mg/mL) ; _em_buffer.pH 4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type 'ORGANELLE OR CELLULAR COMPONENT' _em_entity_assembly.name '7,8-dihydro-8-oxoguanine triphosphatase' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9QUH _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode DIFFRACTION _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 0 _em_imaging.nominal_defocus_max 0 _em_imaging.calibrated_defocus_min 0 _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum 78 _em_imaging.recording_temperature_maximum 98 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter 20 _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type C-flat-1.2/1.3 _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9QUH _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details 'Manual blotting at room temperature with ambient humidity' # _em_experiment.entry_id 9QUH _em_experiment.id 1 _em_experiment.reconstruction_method CRYSTALLOGRAPHY _em_experiment.aggregation_state '3D ARRAY' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A GLY 2 ? A GLY 5 6 1 Y 1 B GLY -2 ? B GLY 1 7 1 Y 1 B SER -1 ? B SER 2 8 1 Y 1 B HIS 0 ? B HIS 3 9 1 Y 1 B MET 1 ? B MET 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8DG PG P N N 1 8DG O1G O N N 2 8DG O2G O N N 3 8DG O3G O N N 4 8DG O3B O N N 5 8DG PB P N S 6 8DG O1B O N N 7 8DG O2B O N N 8 8DG O3A O N N 9 8DG PA P N R 10 8DG O1A O N N 11 8DG O2A O N N 12 8DG "O5'" O N N 13 8DG "C5'" C N N 14 8DG "C4'" C N R 15 8DG "O4'" O N N 16 8DG "C3'" C N S 17 8DG "O3'" O N N 18 8DG "C2'" C N N 19 8DG "C1'" C N R 20 8DG N9 N N N 21 8DG C8 C N N 22 8DG N7 N N N 23 8DG C5 C N N 24 8DG C6 C N N 25 8DG O6 O N N 26 8DG N1 N N N 27 8DG C2 C N N 28 8DG N2 N N N 29 8DG N3 N N N 30 8DG C4 C N N 31 8DG O8 O N N 32 8DG HOG2 H N N 33 8DG H3G H N N 34 8DG HOB2 H N N 35 8DG HOA2 H N N 36 8DG "H5'1" H N N 37 8DG "H5'2" H N N 38 8DG "H4'" H N N 39 8DG "H3'" H N N 40 8DG H1 H N N 41 8DG "H2'1" H N N 42 8DG "H2'2" H N N 43 8DG "H1'" H N N 44 8DG HN7 H N N 45 8DG HN1 H N N 46 8DG HN21 H N N 47 8DG HN22 H N N 48 ALA N N N N 49 ALA CA C N S 50 ALA C C N N 51 ALA O O N N 52 ALA CB C N N 53 ALA OXT O N N 54 ALA H H N N 55 ALA H2 H N N 56 ALA HA H N N 57 ALA HB1 H N N 58 ALA HB2 H N N 59 ALA HB3 H N N 60 ALA HXT H N N 61 ARG N N N N 62 ARG CA C N S 63 ARG C C N N 64 ARG O O N N 65 ARG CB C N N 66 ARG CG C N N 67 ARG CD C N N 68 ARG NE N N N 69 ARG CZ C N N 70 ARG NH1 N N N 71 ARG NH2 N N N 72 ARG OXT O N N 73 ARG H H N N 74 ARG H2 H N N 75 ARG HA H N N 76 ARG HB2 H N N 77 ARG HB3 H N N 78 ARG HG2 H N N 79 ARG HG3 H N N 80 ARG HD2 H N N 81 ARG HD3 H N N 82 ARG HE H N N 83 ARG HH11 H N N 84 ARG HH12 H N N 85 ARG HH21 H N N 86 ARG HH22 H N N 87 ARG HXT H N N 88 ASN N N N N 89 ASN CA C N S 90 ASN C C N N 91 ASN O O N N 92 ASN CB C N N 93 ASN CG C N N 94 ASN OD1 O N N 95 ASN ND2 N N N 96 ASN OXT O N N 97 ASN H H N N 98 ASN H2 H N N 99 ASN HA H N N 100 ASN HB2 H N N 101 ASN HB3 H N N 102 ASN HD21 H N N 103 ASN HD22 H N N 104 ASN HXT H N N 105 ASP N N N N 106 ASP CA C N S 107 ASP C C N N 108 ASP O O N N 109 ASP CB C N N 110 ASP CG C N N 111 ASP OD1 O N N 112 ASP OD2 O N N 113 ASP OXT O N N 114 ASP H H N N 115 ASP H2 H N N 116 ASP HA H N N 117 ASP HB2 H N N 118 ASP HB3 H N N 119 ASP HD2 H N N 120 ASP HXT H N N 121 CYS N N N N 122 CYS CA C N R 123 CYS C C N N 124 CYS O O N N 125 CYS CB C N N 126 CYS SG S N N 127 CYS OXT O N N 128 CYS H H N N 129 CYS H2 H N N 130 CYS HA H N N 131 CYS HB2 H N N 132 CYS HB3 H N N 133 CYS HG H N N 134 CYS HXT H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 PHE N N N N 298 PHE CA C N S 299 PHE C C N N 300 PHE O O N N 301 PHE CB C N N 302 PHE CG C Y N 303 PHE CD1 C Y N 304 PHE CD2 C Y N 305 PHE CE1 C Y N 306 PHE CE2 C Y N 307 PHE CZ C Y N 308 PHE OXT O N N 309 PHE H H N N 310 PHE H2 H N N 311 PHE HA H N N 312 PHE HB2 H N N 313 PHE HB3 H N N 314 PHE HD1 H N N 315 PHE HD2 H N N 316 PHE HE1 H N N 317 PHE HE2 H N N 318 PHE HZ H N N 319 PHE HXT H N N 320 PRO N N N N 321 PRO CA C N S 322 PRO C C N N 323 PRO O O N N 324 PRO CB C N N 325 PRO CG C N N 326 PRO CD C N N 327 PRO OXT O N N 328 PRO H H N N 329 PRO HA H N N 330 PRO HB2 H N N 331 PRO HB3 H N N 332 PRO HG2 H N N 333 PRO HG3 H N N 334 PRO HD2 H N N 335 PRO HD3 H N N 336 PRO HXT H N N 337 SER N N N N 338 SER CA C N S 339 SER C C N N 340 SER O O N N 341 SER CB C N N 342 SER OG O N N 343 SER OXT O N N 344 SER H H N N 345 SER H2 H N N 346 SER HA H N N 347 SER HB2 H N N 348 SER HB3 H N N 349 SER HG H N N 350 SER HXT H N N 351 SO4 S S N N 352 SO4 O1 O N N 353 SO4 O2 O N N 354 SO4 O3 O N N 355 SO4 O4 O N N 356 THR N N N N 357 THR CA C N S 358 THR C C N N 359 THR O O N N 360 THR CB C N R 361 THR OG1 O N N 362 THR CG2 C N N 363 THR OXT O N N 364 THR H H N N 365 THR H2 H N N 366 THR HA H N N 367 THR HB H N N 368 THR HG1 H N N 369 THR HG21 H N N 370 THR HG22 H N N 371 THR HG23 H N N 372 THR HXT H N N 373 TRP N N N N 374 TRP CA C N S 375 TRP C C N N 376 TRP O O N N 377 TRP CB C N N 378 TRP CG C Y N 379 TRP CD1 C Y N 380 TRP CD2 C Y N 381 TRP NE1 N Y N 382 TRP CE2 C Y N 383 TRP CE3 C Y N 384 TRP CZ2 C Y N 385 TRP CZ3 C Y N 386 TRP CH2 C Y N 387 TRP OXT O N N 388 TRP H H N N 389 TRP H2 H N N 390 TRP HA H N N 391 TRP HB2 H N N 392 TRP HB3 H N N 393 TRP HD1 H N N 394 TRP HE1 H N N 395 TRP HE3 H N N 396 TRP HZ2 H N N 397 TRP HZ3 H N N 398 TRP HH2 H N N 399 TRP HXT H N N 400 TYR N N N N 401 TYR CA C N S 402 TYR C C N N 403 TYR O O N N 404 TYR CB C N N 405 TYR CG C Y N 406 TYR CD1 C Y N 407 TYR CD2 C Y N 408 TYR CE1 C Y N 409 TYR CE2 C Y N 410 TYR CZ C Y N 411 TYR OH O N N 412 TYR OXT O N N 413 TYR H H N N 414 TYR H2 H N N 415 TYR HA H N N 416 TYR HB2 H N N 417 TYR HB3 H N N 418 TYR HD1 H N N 419 TYR HD2 H N N 420 TYR HE1 H N N 421 TYR HE2 H N N 422 TYR HH H N N 423 TYR HXT H N N 424 VAL N N N N 425 VAL CA C N S 426 VAL C C N N 427 VAL O O N N 428 VAL CB C N N 429 VAL CG1 C N N 430 VAL CG2 C N N 431 VAL OXT O N N 432 VAL H H N N 433 VAL H2 H N N 434 VAL HA H N N 435 VAL HB H N N 436 VAL HG11 H N N 437 VAL HG12 H N N 438 VAL HG13 H N N 439 VAL HG21 H N N 440 VAL HG22 H N N 441 VAL HG23 H N N 442 VAL HXT H N N 443 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8DG PG O1G doub N N 1 8DG PG O2G sing N N 2 8DG PG O3G sing N N 3 8DG PG O3B sing N N 4 8DG O2G HOG2 sing N N 5 8DG O3G H3G sing N N 6 8DG O3B PB sing N N 7 8DG PB O1B doub N N 8 8DG PB O2B sing N N 9 8DG PB O3A sing N N 10 8DG O2B HOB2 sing N N 11 8DG O3A PA sing N N 12 8DG PA O1A doub N N 13 8DG PA O2A sing N N 14 8DG PA "O5'" sing N N 15 8DG O2A HOA2 sing N N 16 8DG "O5'" "C5'" sing N N 17 8DG "C5'" "C4'" sing N N 18 8DG "C5'" "H5'1" sing N N 19 8DG "C5'" "H5'2" sing N N 20 8DG "C4'" "O4'" sing N N 21 8DG "C4'" "C3'" sing N N 22 8DG "C4'" "H4'" sing N N 23 8DG "O4'" "C1'" sing N N 24 8DG "C3'" "O3'" sing N N 25 8DG "C3'" "C2'" sing N N 26 8DG "C3'" "H3'" sing N N 27 8DG "O3'" H1 sing N N 28 8DG "C2'" "C1'" sing N N 29 8DG "C2'" "H2'1" sing N N 30 8DG "C2'" "H2'2" sing N N 31 8DG "C1'" N9 sing N N 32 8DG "C1'" "H1'" sing N N 33 8DG N9 C8 sing N N 34 8DG N9 C4 sing N N 35 8DG C8 N7 sing N N 36 8DG C8 O8 doub N N 37 8DG N7 C5 sing N N 38 8DG N7 HN7 sing N N 39 8DG C5 C6 sing N N 40 8DG C5 C4 doub N N 41 8DG C6 O6 doub N N 42 8DG C6 N1 sing N N 43 8DG N1 C2 sing N N 44 8DG N1 HN1 sing N N 45 8DG C2 N2 sing N N 46 8DG C2 N3 doub N N 47 8DG N2 HN21 sing N N 48 8DG N2 HN22 sing N N 49 8DG N3 C4 sing N N 50 ALA N CA sing N N 51 ALA N H sing N N 52 ALA N H2 sing N N 53 ALA CA C sing N N 54 ALA CA CB sing N N 55 ALA CA HA sing N N 56 ALA C O doub N N 57 ALA C OXT sing N N 58 ALA CB HB1 sing N N 59 ALA CB HB2 sing N N 60 ALA CB HB3 sing N N 61 ALA OXT HXT sing N N 62 ARG N CA sing N N 63 ARG N H sing N N 64 ARG N H2 sing N N 65 ARG CA C sing N N 66 ARG CA CB sing N N 67 ARG CA HA sing N N 68 ARG C O doub N N 69 ARG C OXT sing N N 70 ARG CB CG sing N N 71 ARG CB HB2 sing N N 72 ARG CB HB3 sing N N 73 ARG CG CD sing N N 74 ARG CG HG2 sing N N 75 ARG CG HG3 sing N N 76 ARG CD NE sing N N 77 ARG CD HD2 sing N N 78 ARG CD HD3 sing N N 79 ARG NE CZ sing N N 80 ARG NE HE sing N N 81 ARG CZ NH1 sing N N 82 ARG CZ NH2 doub N N 83 ARG NH1 HH11 sing N N 84 ARG NH1 HH12 sing N N 85 ARG NH2 HH21 sing N N 86 ARG NH2 HH22 sing N N 87 ARG OXT HXT sing N N 88 ASN N CA sing N N 89 ASN N H sing N N 90 ASN N H2 sing N N 91 ASN CA C sing N N 92 ASN CA CB sing N N 93 ASN CA HA sing N N 94 ASN C O doub N N 95 ASN C OXT sing N N 96 ASN CB CG sing N N 97 ASN CB HB2 sing N N 98 ASN CB HB3 sing N N 99 ASN CG OD1 doub N N 100 ASN CG ND2 sing N N 101 ASN ND2 HD21 sing N N 102 ASN ND2 HD22 sing N N 103 ASN OXT HXT sing N N 104 ASP N CA sing N N 105 ASP N H sing N N 106 ASP N H2 sing N N 107 ASP CA C sing N N 108 ASP CA CB sing N N 109 ASP CA HA sing N N 110 ASP C O doub N N 111 ASP C OXT sing N N 112 ASP CB CG sing N N 113 ASP CB HB2 sing N N 114 ASP CB HB3 sing N N 115 ASP CG OD1 doub N N 116 ASP CG OD2 sing N N 117 ASP OD2 HD2 sing N N 118 ASP OXT HXT sing N N 119 CYS N CA sing N N 120 CYS N H sing N N 121 CYS N H2 sing N N 122 CYS CA C sing N N 123 CYS CA CB sing N N 124 CYS CA HA sing N N 125 CYS C O doub N N 126 CYS C OXT sing N N 127 CYS CB SG sing N N 128 CYS CB HB2 sing N N 129 CYS CB HB3 sing N N 130 CYS SG HG sing N N 131 CYS OXT HXT sing N N 132 GLN N CA sing N N 133 GLN N H sing N N 134 GLN N H2 sing N N 135 GLN CA C sing N N 136 GLN CA CB sing N N 137 GLN CA HA sing N N 138 GLN C O doub N N 139 GLN C OXT sing N N 140 GLN CB CG sing N N 141 GLN CB HB2 sing N N 142 GLN CB HB3 sing N N 143 GLN CG CD sing N N 144 GLN CG HG2 sing N N 145 GLN CG HG3 sing N N 146 GLN CD OE1 doub N N 147 GLN CD NE2 sing N N 148 GLN NE2 HE21 sing N N 149 GLN NE2 HE22 sing N N 150 GLN OXT HXT sing N N 151 GLU N CA sing N N 152 GLU N H sing N N 153 GLU N H2 sing N N 154 GLU CA C sing N N 155 GLU CA CB sing N N 156 GLU CA HA sing N N 157 GLU C O doub N N 158 GLU C OXT sing N N 159 GLU CB CG sing N N 160 GLU CB HB2 sing N N 161 GLU CB HB3 sing N N 162 GLU CG CD sing N N 163 GLU CG HG2 sing N N 164 GLU CG HG3 sing N N 165 GLU CD OE1 doub N N 166 GLU CD OE2 sing N N 167 GLU OE2 HE2 sing N N 168 GLU OXT HXT sing N N 169 GLY N CA sing N N 170 GLY N H sing N N 171 GLY N H2 sing N N 172 GLY CA C sing N N 173 GLY CA HA2 sing N N 174 GLY CA HA3 sing N N 175 GLY C O doub N N 176 GLY C OXT sing N N 177 GLY OXT HXT sing N N 178 HIS N CA sing N N 179 HIS N H sing N N 180 HIS N H2 sing N N 181 HIS CA C sing N N 182 HIS CA CB sing N N 183 HIS CA HA sing N N 184 HIS C O doub N N 185 HIS C OXT sing N N 186 HIS CB CG sing N N 187 HIS CB HB2 sing N N 188 HIS CB HB3 sing N N 189 HIS CG ND1 sing Y N 190 HIS CG CD2 doub Y N 191 HIS ND1 CE1 doub Y N 192 HIS ND1 HD1 sing N N 193 HIS CD2 NE2 sing Y N 194 HIS CD2 HD2 sing N N 195 HIS CE1 NE2 sing Y N 196 HIS CE1 HE1 sing N N 197 HIS NE2 HE2 sing N N 198 HIS OXT HXT sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 ILE N CA sing N N 202 ILE N H sing N N 203 ILE N H2 sing N N 204 ILE CA C sing N N 205 ILE CA CB sing N N 206 ILE CA HA sing N N 207 ILE C O doub N N 208 ILE C OXT sing N N 209 ILE CB CG1 sing N N 210 ILE CB CG2 sing N N 211 ILE CB HB sing N N 212 ILE CG1 CD1 sing N N 213 ILE CG1 HG12 sing N N 214 ILE CG1 HG13 sing N N 215 ILE CG2 HG21 sing N N 216 ILE CG2 HG22 sing N N 217 ILE CG2 HG23 sing N N 218 ILE CD1 HD11 sing N N 219 ILE CD1 HD12 sing N N 220 ILE CD1 HD13 sing N N 221 ILE OXT HXT sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MET N CA sing N N 268 MET N H sing N N 269 MET N H2 sing N N 270 MET CA C sing N N 271 MET CA CB sing N N 272 MET CA HA sing N N 273 MET C O doub N N 274 MET C OXT sing N N 275 MET CB CG sing N N 276 MET CB HB2 sing N N 277 MET CB HB3 sing N N 278 MET CG SD sing N N 279 MET CG HG2 sing N N 280 MET CG HG3 sing N N 281 MET SD CE sing N N 282 MET CE HE1 sing N N 283 MET CE HE2 sing N N 284 MET CE HE3 sing N N 285 MET OXT HXT sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 PRO N CA sing N N 310 PRO N CD sing N N 311 PRO N H sing N N 312 PRO CA C sing N N 313 PRO CA CB sing N N 314 PRO CA HA sing N N 315 PRO C O doub N N 316 PRO C OXT sing N N 317 PRO CB CG sing N N 318 PRO CB HB2 sing N N 319 PRO CB HB3 sing N N 320 PRO CG CD sing N N 321 PRO CG HG2 sing N N 322 PRO CG HG3 sing N N 323 PRO CD HD2 sing N N 324 PRO CD HD3 sing N N 325 PRO OXT HXT sing N N 326 SER N CA sing N N 327 SER N H sing N N 328 SER N H2 sing N N 329 SER CA C sing N N 330 SER CA CB sing N N 331 SER CA HA sing N N 332 SER C O doub N N 333 SER C OXT sing N N 334 SER CB OG sing N N 335 SER CB HB2 sing N N 336 SER CB HB3 sing N N 337 SER OG HG sing N N 338 SER OXT HXT sing N N 339 SO4 S O1 doub N N 340 SO4 S O2 doub N N 341 SO4 S O3 sing N N 342 SO4 S O4 sing N N 343 THR N CA sing N N 344 THR N H sing N N 345 THR N H2 sing N N 346 THR CA C sing N N 347 THR CA CB sing N N 348 THR CA HA sing N N 349 THR C O doub N N 350 THR C OXT sing N N 351 THR CB OG1 sing N N 352 THR CB CG2 sing N N 353 THR CB HB sing N N 354 THR OG1 HG1 sing N N 355 THR CG2 HG21 sing N N 356 THR CG2 HG22 sing N N 357 THR CG2 HG23 sing N N 358 THR OXT HXT sing N N 359 TRP N CA sing N N 360 TRP N H sing N N 361 TRP N H2 sing N N 362 TRP CA C sing N N 363 TRP CA CB sing N N 364 TRP CA HA sing N N 365 TRP C O doub N N 366 TRP C OXT sing N N 367 TRP CB CG sing N N 368 TRP CB HB2 sing N N 369 TRP CB HB3 sing N N 370 TRP CG CD1 doub Y N 371 TRP CG CD2 sing Y N 372 TRP CD1 NE1 sing Y N 373 TRP CD1 HD1 sing N N 374 TRP CD2 CE2 doub Y N 375 TRP CD2 CE3 sing Y N 376 TRP NE1 CE2 sing Y N 377 TRP NE1 HE1 sing N N 378 TRP CE2 CZ2 sing Y N 379 TRP CE3 CZ3 doub Y N 380 TRP CE3 HE3 sing N N 381 TRP CZ2 CH2 doub Y N 382 TRP CZ2 HZ2 sing N N 383 TRP CZ3 CH2 sing Y N 384 TRP CZ3 HZ3 sing N N 385 TRP CH2 HH2 sing N N 386 TRP OXT HXT sing N N 387 TYR N CA sing N N 388 TYR N H sing N N 389 TYR N H2 sing N N 390 TYR CA C sing N N 391 TYR CA CB sing N N 392 TYR CA HA sing N N 393 TYR C O doub N N 394 TYR C OXT sing N N 395 TYR CB CG sing N N 396 TYR CB HB2 sing N N 397 TYR CB HB3 sing N N 398 TYR CG CD1 doub Y N 399 TYR CG CD2 sing Y N 400 TYR CD1 CE1 sing Y N 401 TYR CD1 HD1 sing N N 402 TYR CD2 CE2 doub Y N 403 TYR CD2 HD2 sing N N 404 TYR CE1 CZ doub Y N 405 TYR CE1 HE1 sing N N 406 TYR CE2 CZ sing Y N 407 TYR CE2 HE2 sing N N 408 TYR CZ OH sing N N 409 TYR OH HH sing N N 410 TYR OXT HXT sing N N 411 VAL N CA sing N N 412 VAL N H sing N N 413 VAL N H2 sing N N 414 VAL CA C sing N N 415 VAL CA CB sing N N 416 VAL CA HA sing N N 417 VAL C O doub N N 418 VAL C OXT sing N N 419 VAL CB CG1 sing N N 420 VAL CB CG2 sing N N 421 VAL CB HB sing N N 422 VAL CG1 HG11 sing N N 423 VAL CG1 HG12 sing N N 424 VAL CG1 HG13 sing N N 425 VAL CG2 HG21 sing N N 426 VAL CG2 HG22 sing N N 427 VAL CG2 HG23 sing N N 428 VAL OXT HXT sing N N 429 # _em_3d_crystal_entity.angle_alpha 90 _em_3d_crystal_entity.angle_beta 90 _em_3d_crystal_entity.angle_gamma 90 _em_3d_crystal_entity.image_processing_id 1 _em_3d_crystal_entity.id 1 _em_3d_crystal_entity.length_a 59.34 _em_3d_crystal_entity.length_b 67.55 _em_3d_crystal_entity.length_c 80.11 _em_3d_crystal_entity.space_group_name 'P 21 21 21' _em_3d_crystal_entity.space_group_num 19 # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 30 % ? 1 PEG-6k 1 0.1 M NaAc 2 'sodium acetate' 1 0.16 M Li2SO4 3 'lithium sulfate' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type NONE # loop_ _em_diffraction_shell.em_diffraction_stats_id _em_diffraction_shell.fourier_space_coverage _em_diffraction_shell.high_resolution _em_diffraction_shell.id _em_diffraction_shell.low_resolution _em_diffraction_shell.multiplicity _em_diffraction_shell.num_structure_factors _em_diffraction_shell.phase_residual 1 95.8 4.43 1 29.35 13.4 3502 16.56 1 43.5 2.32 2 2.44 13.4 1595 45.09 # _em_diffraction_stats.details ? _em_diffraction_stats.fourier_space_coverage 79.1 _em_diffraction_stats.high_resolution 2.32 _em_diffraction_stats.id 1 _em_diffraction_stats.image_processing_id 1 _em_diffraction_stats.num_intensities_measured 152619 _em_diffraction_stats.num_structure_factors 11420 _em_diffraction_stats.overall_phase_error ? _em_diffraction_stats.overall_phase_residual ? _em_diffraction_stats.phase_error_rejection_criteria 0 _em_diffraction_stats.r_merge 45.6 _em_diffraction_stats.r_sym ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.0182 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 0.37 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI CETA (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'IMAGE ACQUISITION' ? 1 ? ? 1 ? ? ? MASKING ? 2 ? ? ? ? ? ? 'CTF CORRECTION' ? 3 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 4 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 5 ? ? ? ? ? ? 'MODEL FITTING' ? 6 ? 1 ? ? ? ? OTHER ? 7 ? ? ? ? ? ? 'MOLECULAR REPLACEMENT' ? 8 1 ? ? ? ? ? 'LATTICE DISTORTION CORRECTION' ? 9 1 ? ? ? ? ? 'SYMMETRY DETERMINATION' ? 10 1 ? ? ? ? ? 'CRYSTALLOGRAPHY MERGING' ? 11 1 ? ? ? ? ? RECONSTRUCTION ? 12 1 ? ? ? ? ? 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX ? ? # _em_specimen.concentration 14 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Knut and Alice Wallenberg Foundation' Sweden ? 1 'Swedish Research Council' Sweden ? 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3ZR1 _pdbx_initial_refinement_model.details ? # _pdbx_related_exp_data_set.ordinal 1 _pdbx_related_exp_data_set.data_reference 10.5281/zenodo.15168593 _pdbx_related_exp_data_set.metadata_reference ? _pdbx_related_exp_data_set.data_set_type 'diffraction image data' _pdbx_related_exp_data_set.details ? # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 # _atom_sites.entry_id 9QUH _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.016852 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014804 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012483 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.pdbx_scat_Cromer_Mann_a5 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.pdbx_scat_Cromer_Mann_b5 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 0.08930 0.25630 0.75700 1.04870 0.35750 0.24650 1.71000 6.40940 18.61130 50.25230 0.0 ;5-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.03490 0.12010 0.19700 0.05730 0.11950 0.53470 3.58670 12.34710 18.95250 38.62690 0.0 ;5-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 0.10220 0.32190 0.79820 0.81970 0.17150 0.24510 1.74810 6.19250 17.38940 48.14310 0.0 ;5-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 0.09740 0.29210 0.69100 0.69900 0.20390 0.20670 1.38150 4.69430 12.71050 32.47260 0.0 ;5-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 0.25480 0.61060 1.45410 2.32040 0.84770 0.29080 1.87400 8.51760 24.34340 63.29960 0.0 ;5-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 0.24970 0.56280 1.38990 2.18650 0.77150 0.26810 1.67110 7.02670 19.53770 50.38880 0.0 ;5-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #