HEADER TRANSFERASE 17-APR-25 9QYF TITLE PARP9 MACRO DOMAIN 2 IN COMPLEX WITH ADPR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP9; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ADP-RIBOSYLTRANSFERASE DIPHTHERIA TOXIN-LIKE 9,ARTD9,B COMPND 5 AGGRESSIVE LYMPHOMA PROTEIN,POLY [ADP-RIBOSE] POLYMERASE 9,PARP-9; COMPND 6 EC: 2.4.2.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PARP9, BAL, BAL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS COMPLEX, ADP-RIBOSE, ADPRIBOSYLATION, PARP9, MACRO DOMAIN, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.N.FOURKIOTIS,A.CHIKUNOVA,C.A.TSIKA,P.K.KRAVVARITI,A.S.TSATSOULI, AUTHOR 2 A.PERRAKIS,A.G.SPYROULIAS REVDAT 1 28-MAY-25 9QYF 0 JRNL AUTH K.N.FOURKIOTIS,A.CHIKUNOVA,C.A.TSIKA,P.K.KRAVVARITI, JRNL AUTH 2 A.S.TSATSOULI,A.PERRAKIS,A.G.SPYROULIAS JRNL TITL COMPARATIVE ANALYSIS OF HPARP9 MACRO DOMAINS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0425 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 43241 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.135 REMARK 3 R VALUE (WORKING SET) : 0.133 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2255 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3122 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE SET COUNT : 175 REMARK 3 BIN FREE R VALUE : 0.2510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1518 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 211 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.69000 REMARK 3 B22 (A**2) : 1.69000 REMARK 3 B33 (A**2) : -3.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.047 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.048 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.304 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.982 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.973 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1697 ; 0.010 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 1615 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2316 ; 1.747 ; 1.821 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3738 ; 0.605 ; 1.759 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 204 ; 5.693 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 2 ; 3.225 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 308 ;12.007 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 271 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1886 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 364 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 798 ; 4.746 ; 1.649 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 798 ; 4.703 ; 1.648 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1008 ; 6.370 ; 2.971 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1009 ; 6.383 ; 2.973 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 899 ; 6.969 ; 1.966 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 900 ; 6.965 ; 1.966 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1309 ; 9.547 ; 3.474 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1933 ;13.871 ;24.100 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1867 ;12.500 ;19.260 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3312 ; 3.902 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 9QYF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-APR-25. REMARK 100 THE DEPOSITION ID IS D_1292147148. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-APR-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9655 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45496 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 40.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SUCCINIC ACID, 15% PEG 3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.07900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 26.07150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 26.07150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 99.11850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 26.07150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 26.07150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.03950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 26.07150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 26.07150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 99.11850 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 26.07150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 26.07150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.03950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 66.07900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 301 REMARK 465 ALA A 302 REMARK 465 MET A 303 REMARK 465 ALA A 304 REMARK 465 THR A 305 REMARK 465 THR A 306 REMARK 465 PRO A 307 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 764 O HOH A 783 1.81 REMARK 500 O HOH A 684 O HOH A 750 2.00 REMARK 500 O HOH A 606 O HOH A 667 2.04 REMARK 500 O HOH A 677 O HOH A 774 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 772 O HOH A 800 6455 1.60 REMARK 500 O HOH A 769 O HOH A 786 3454 1.86 REMARK 500 O HOH A 610 O HOH A 773 7455 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 315 -118.06 52.84 REMARK 500 ASP A 342 94.17 -164.95 REMARK 500 PHE A 384 -123.98 51.57 REMARK 500 HIS A 397 46.93 -159.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 806 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A 807 DISTANCE = 6.62 ANGSTROMS REMARK 525 HOH A 808 DISTANCE = 6.75 ANGSTROMS REMARK 525 HOH A 809 DISTANCE = 9.73 ANGSTROMS REMARK 525 HOH A 810 DISTANCE = 10.20 ANGSTROMS REMARK 525 HOH A 811 DISTANCE = 10.82 ANGSTROMS DBREF 9QYF A 305 497 UNP Q8IXQ6 PARP9_HUMAN 305 497 SEQADV 9QYF GLY A 301 UNP Q8IXQ6 EXPRESSION TAG SEQADV 9QYF ALA A 302 UNP Q8IXQ6 EXPRESSION TAG SEQADV 9QYF MET A 303 UNP Q8IXQ6 EXPRESSION TAG SEQADV 9QYF ALA A 304 UNP Q8IXQ6 EXPRESSION TAG SEQRES 1 A 197 GLY ALA MET ALA THR THR PRO SER PHE ASN ALA MET VAL SEQRES 2 A 197 VAL ASN ASN LEU THR LEU GLN ILE VAL GLN GLY HIS ILE SEQRES 3 A 197 GLU TRP GLN THR ALA ASP VAL ILE VAL ASN SER VAL ASN SEQRES 4 A 197 PRO HIS ASP ILE THR VAL GLY PRO VAL ALA LYS SER ILE SEQRES 5 A 197 LEU GLN GLN ALA GLY VAL GLU MET LYS SER GLU PHE LEU SEQRES 6 A 197 ALA THR LYS ALA LYS GLN PHE GLN ARG SER GLN LEU VAL SEQRES 7 A 197 LEU VAL THR LYS GLY PHE ASN LEU PHE CYS LYS TYR ILE SEQRES 8 A 197 TYR HIS VAL LEU TRP HIS SER GLU PHE PRO LYS PRO GLN SEQRES 9 A 197 ILE LEU LYS HIS ALA MET LYS GLU CYS LEU GLU LYS CYS SEQRES 10 A 197 ILE GLU GLN ASN ILE THR SER ILE SER PHE PRO ALA LEU SEQRES 11 A 197 GLY THR GLY ASN MET GLU ILE LYS LYS GLU THR ALA ALA SEQRES 12 A 197 GLU ILE LEU PHE ASP GLU VAL LEU THR PHE ALA LYS ASP SEQRES 13 A 197 HIS VAL LYS HIS GLN LEU THR VAL LYS PHE VAL ILE PHE SEQRES 14 A 197 PRO THR ASP LEU GLU ILE TYR LYS ALA PHE SER SER GLU SEQRES 15 A 197 MET ALA LYS ARG SER LYS MET LEU SER LEU ASN ASN TYR SEQRES 16 A 197 SER VAL HET APR A 501 36 HET AR6 A 502 36 HETNAM APR ADENOSINE-5-DIPHOSPHORIBOSE HETNAM AR6 [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY- HETNAM 2 AR6 OXOLAN-2-YL]METHYL[HYDROXY-[[(2R,3S,4R,5S)-3,4,5- HETNAM 3 AR6 TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN HETNAM 4 AR6 PHOSPHATE HETSYN AR6 ADENOSINE-5-DIPHOSPHORIBOSE FORMUL 2 APR C15 H23 N5 O14 P2 FORMUL 3 AR6 C15 H23 N5 O14 P2 FORMUL 4 HOH *211(H2 O) HELIX 1 AA1 HIS A 325 GLN A 329 5 5 HELIX 2 AA2 GLY A 346 GLY A 357 1 12 HELIX 3 AA3 GLY A 357 PHE A 372 1 16 HELIX 4 AA4 PRO A 401 GLN A 420 1 20 HELIX 5 AA5 LYS A 438 HIS A 457 1 20 HELIX 6 AA6 ASP A 472 LEU A 490 1 19 SHEET 1 AA1 8 VAL A 378 LYS A 382 0 SHEET 2 AA1 8 TYR A 390 LEU A 395 -1 O HIS A 393 N LEU A 379 SHEET 3 AA1 8 VAL A 333 VAL A 338 1 N VAL A 338 O VAL A 394 SHEET 4 AA1 8 SER A 424 PRO A 428 1 O SER A 426 N VAL A 335 SHEET 5 AA1 8 LEU A 462 ILE A 468 1 O VAL A 467 N PHE A 427 SHEET 6 AA1 8 LEU A 317 GLN A 323 1 N VAL A 322 O ILE A 468 SHEET 7 AA1 8 ALA A 311 VAL A 314 -1 N VAL A 314 O LEU A 317 SHEET 8 AA1 8 ASN A 493 TYR A 495 -1 O TYR A 495 N ALA A 311 CRYST1 52.143 52.143 132.158 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019178 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019178 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007567 0.00000 CONECT 1582 1583 1587 CONECT 1583 1582 1584 CONECT 1584 1583 1585 CONECT 1585 1584 1586 1591 CONECT 1586 1585 1587 1589 CONECT 1587 1582 1586 1588 CONECT 1588 1587 CONECT 1589 1586 1590 CONECT 1590 1589 1591 CONECT 1591 1585 1590 1592 CONECT 1592 1591 1593 1597 CONECT 1593 1592 1594 1595 CONECT 1594 1593 CONECT 1595 1593 1596 1598 CONECT 1596 1595 CONECT 1597 1592 1598 CONECT 1598 1595 1597 1599 CONECT 1599 1598 1600 CONECT 1600 1599 1601 CONECT 1601 1600 1602 1603 1604 CONECT 1602 1601 CONECT 1603 1601 CONECT 1604 1601 1605 CONECT 1605 1604 1606 1607 1608 CONECT 1606 1605 CONECT 1607 1605 CONECT 1608 1605 1609 CONECT 1609 1608 1617 CONECT 1610 1612 1617 CONECT 1611 1612 CONECT 1612 1610 1611 1614 CONECT 1613 1614 CONECT 1614 1612 1613 1616 CONECT 1615 1616 CONECT 1616 1614 1615 1617 CONECT 1617 1609 1610 1616 CONECT 1618 1619 1623 CONECT 1619 1618 1620 CONECT 1620 1619 1621 CONECT 1621 1620 1622 1627 CONECT 1622 1621 1623 1625 CONECT 1623 1618 1622 1624 CONECT 1624 1623 CONECT 1625 1622 1626 CONECT 1626 1625 1627 CONECT 1627 1621 1626 1630 CONECT 1628 1631 1637 1643 1651 CONECT 1629 1632 1638 1643 1653 CONECT 1630 1627 1635 1647 CONECT 1631 1628 CONECT 1632 1629 CONECT 1633 1634 1639 1649 CONECT 1634 1633 CONECT 1635 1630 1636 1641 CONECT 1636 1635 CONECT 1637 1628 CONECT 1638 1629 CONECT 1639 1633 1640 1644 CONECT 1640 1639 CONECT 1641 1635 1642 1646 CONECT 1642 1641 CONECT 1643 1628 1629 CONECT 1644 1639 1645 1648 CONECT 1645 1644 CONECT 1646 1641 1647 1650 CONECT 1647 1630 1646 CONECT 1648 1644 1649 1652 CONECT 1649 1633 1648 CONECT 1650 1646 1651 CONECT 1651 1628 1650 CONECT 1652 1648 1653 CONECT 1653 1629 1652 MASTER 337 0 2 6 8 0 0 6 1801 1 72 16 END