HEADER MEMBRANE PROTEIN 02-MAY-25 9R33 TITLE IMPROVED CRYSTALLIZATION AND DIFFRACTION QUALITY OF MYCOBACTERIUM TITLE 2 TUBERCULOSIS OMAMC/RV1363C UPON HEAT TREATMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: OMAMC; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 OTHER_DETAILS: TRUNCATED VARIANT, N-TERMINAL RESIDUES 1-128 DELETED SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 GENE: RV1363C, MTCY02B10.27C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PETM11 KEYWDS MYCOBACTERIUM TUBERCULOSIS, MAMMALIAN CELL ENTRY, OMAM, MAM, MCE, KEYWDS 2 MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.J.HYNONEN,R.VENKATESAN REVDAT 1 13-MAY-26 9R33 0 JRNL AUTH M.J.HYNONEN,R.VENKATESAN JRNL TITL IMPROVED CRYSTALLIZATION AND DIFFRACTION QUALITY OF JRNL TITL 2 MYCOBACTERIUM TUBERCULOSIS OMAMC/RV1363C UPON HEAT TREATMENT JRNL REF BIORXIV 2026 JRNL REFN ISSN 2692-8205 JRNL DOI 10.64898/2026.04.30.722021 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 66.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 22435 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.240 REMARK 3 FREE R VALUE TEST SET COUNT : 1175 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 66.5400 - 4.6000 1.00 2810 136 0.1872 0.2226 REMARK 3 2 4.6000 - 3.6500 1.00 2724 162 0.1963 0.2198 REMARK 3 3 3.6500 - 3.1900 1.00 2732 165 0.2351 0.2520 REMARK 3 4 3.1900 - 2.9000 1.00 2725 139 0.2719 0.2728 REMARK 3 5 2.9000 - 2.6900 1.00 2730 160 0.2844 0.3107 REMARK 3 6 2.6900 - 2.5300 0.99 2706 140 0.3038 0.3568 REMARK 3 7 2.5300 - 2.4000 0.98 2699 136 0.3082 0.2950 REMARK 3 8 2.4000 - 2.3000 0.79 2134 137 0.3269 0.3398 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.332 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.586 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3579 REMARK 3 ANGLE : 0.355 4841 REMARK 3 CHIRALITY : 0.040 544 REMARK 3 PLANARITY : 0.003 642 REMARK 3 DIHEDRAL : 12.106 1308 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 107 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.9635 19.5582 53.2448 REMARK 3 T TENSOR REMARK 3 T11: 0.7840 T22: 0.6501 REMARK 3 T33: 0.7733 T12: 0.0898 REMARK 3 T13: -0.3189 T23: 0.0775 REMARK 3 L TENSOR REMARK 3 L11: 3.2465 L22: 1.2326 REMARK 3 L33: 1.4510 L12: -1.9592 REMARK 3 L13: 0.0824 L23: 0.2498 REMARK 3 S TENSOR REMARK 3 S11: -0.4035 S12: -0.7934 S13: -0.1175 REMARK 3 S21: 2.1314 S22: 0.6875 S23: -1.2705 REMARK 3 S31: -0.3633 S32: 0.3407 S33: -0.0214 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 121 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.5573 37.1539 23.6054 REMARK 3 T TENSOR REMARK 3 T11: 0.4404 T22: 0.5606 REMARK 3 T33: 0.4511 T12: 0.0114 REMARK 3 T13: 0.0215 T23: 0.0247 REMARK 3 L TENSOR REMARK 3 L11: -0.6167 L22: 0.1314 REMARK 3 L33: 4.4438 L12: 0.3782 REMARK 3 L13: 0.9255 L23: 0.1689 REMARK 3 S TENSOR REMARK 3 S11: -0.1776 S12: 0.2107 S13: 0.1581 REMARK 3 S21: -0.0973 S22: -0.0382 S23: -0.2948 REMARK 3 S31: -0.1989 S32: 0.5633 S33: -0.0219 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 156 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.9622 40.2931 -4.7144 REMARK 3 T TENSOR REMARK 3 T11: 0.6721 T22: 0.7470 REMARK 3 T33: 0.4871 T12: -0.0212 REMARK 3 T13: 0.0814 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 2.8522 L22: 1.2328 REMARK 3 L33: 2.8132 L12: -0.5945 REMARK 3 L13: 0.6293 L23: -1.1124 REMARK 3 S TENSOR REMARK 3 S11: 0.0178 S12: 0.8643 S13: -0.1023 REMARK 3 S21: -0.5569 S22: -0.2117 S23: -0.1656 REMARK 3 S31: 0.0764 S32: 0.5468 S33: 0.1847 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 209 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.1364 38.8757 9.6770 REMARK 3 T TENSOR REMARK 3 T11: 0.5241 T22: 0.3534 REMARK 3 T33: 0.3082 T12: -0.0626 REMARK 3 T13: 0.0695 T23: 0.0450 REMARK 3 L TENSOR REMARK 3 L11: 3.6318 L22: 1.1718 REMARK 3 L33: 5.0537 L12: 1.6541 REMARK 3 L13: -0.2657 L23: -0.4273 REMARK 3 S TENSOR REMARK 3 S11: -0.2692 S12: 0.3863 S13: 0.1021 REMARK 3 S21: -0.7976 S22: 0.3604 S23: 0.0515 REMARK 3 S31: 0.1550 S32: -0.0404 S33: 0.2031 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 229 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7318 39.8732 4.8070 REMARK 3 T TENSOR REMARK 3 T11: 0.5309 T22: 0.4996 REMARK 3 T33: 0.4478 T12: -0.0343 REMARK 3 T13: 0.0579 T23: 0.0384 REMARK 3 L TENSOR REMARK 3 L11: 3.7337 L22: 3.6376 REMARK 3 L33: 4.5676 L12: 1.5811 REMARK 3 L13: -0.6395 L23: -0.2542 REMARK 3 S TENSOR REMARK 3 S11: 0.0132 S12: 0.6238 S13: 0.4243 REMARK 3 S21: -0.7230 S22: -0.0629 S23: -0.3654 REMARK 3 S31: -0.2160 S32: 0.0046 S33: 0.1162 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 109 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.4694 35.1489 66.0840 REMARK 3 T TENSOR REMARK 3 T11: 0.8511 T22: 1.1830 REMARK 3 T33: 0.5176 T12: 0.1851 REMARK 3 T13: -0.0252 T23: 0.0753 REMARK 3 L TENSOR REMARK 3 L11: 2.6424 L22: 2.0958 REMARK 3 L33: 1.2511 L12: 0.9437 REMARK 3 L13: 0.5913 L23: 0.2259 REMARK 3 S TENSOR REMARK 3 S11: -0.8028 S12: -1.4958 S13: 0.1724 REMARK 3 S21: 1.6849 S22: 0.4539 S23: 0.4546 REMARK 3 S31: 1.4619 S32: -1.2428 S33: -0.1454 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 121 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.7133 20.4198 36.1173 REMARK 3 T TENSOR REMARK 3 T11: 0.5291 T22: 0.3461 REMARK 3 T33: 0.5782 T12: -0.0053 REMARK 3 T13: -0.1206 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 4.1374 L22: 0.8241 REMARK 3 L33: 2.6992 L12: 3.3822 REMARK 3 L13: 3.5602 L23: 2.2753 REMARK 3 S TENSOR REMARK 3 S11: 0.4225 S12: -0.0136 S13: -0.4984 REMARK 3 S21: 0.1375 S22: 0.1857 S23: -0.0889 REMARK 3 S31: 0.4561 S32: -0.0735 S33: -0.4104 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 156 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.5644 11.1137 19.4061 REMARK 3 T TENSOR REMARK 3 T11: 0.5329 T22: 0.5057 REMARK 3 T33: 0.5430 T12: -0.1561 REMARK 3 T13: -0.0241 T23: -0.0438 REMARK 3 L TENSOR REMARK 3 L11: 1.7729 L22: 4.7267 REMARK 3 L33: 4.0567 L12: 1.3370 REMARK 3 L13: 2.1785 L23: 1.7075 REMARK 3 S TENSOR REMARK 3 S11: 0.4921 S12: -0.3549 S13: -0.2016 REMARK 3 S21: 0.2254 S22: -0.4363 S23: 0.1036 REMARK 3 S31: 0.8770 S32: -0.8052 S33: 0.0501 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 227 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.2632 5.3197 4.1200 REMARK 3 T TENSOR REMARK 3 T11: 1.3209 T22: 0.8813 REMARK 3 T33: 0.8385 T12: 0.0642 REMARK 3 T13: -0.0263 T23: -0.2060 REMARK 3 L TENSOR REMARK 3 L11: 0.2695 L22: 1.4109 REMARK 3 L33: 1.0674 L12: -0.5628 REMARK 3 L13: -0.3546 L23: 1.1931 REMARK 3 S TENSOR REMARK 3 S11: 0.6970 S12: 0.8525 S13: 0.5983 REMARK 3 S21: 0.0146 S22: 1.0644 S23: 0.1432 REMARK 3 S31: -0.6342 S32: 0.5151 S33: 0.0620 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 237 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.3232 19.1096 23.2191 REMARK 3 T TENSOR REMARK 3 T11: 0.4786 T22: 0.4639 REMARK 3 T33: 0.4972 T12: -0.0957 REMARK 3 T13: -0.0638 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 4.0302 L22: 5.4133 REMARK 3 L33: 5.1222 L12: 0.6900 REMARK 3 L13: -0.3629 L23: 0.3387 REMARK 3 S TENSOR REMARK 3 S11: 0.1913 S12: -0.1503 S13: -0.2634 REMARK 3 S21: 0.1822 S22: -0.0145 S23: 0.2518 REMARK 3 S31: 0.8651 S32: -0.6766 S33: -0.1767 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 106 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9606 49.6643 52.0286 REMARK 3 T TENSOR REMARK 3 T11: 0.8046 T22: 0.8592 REMARK 3 T33: 0.6213 T12: -0.2690 REMARK 3 T13: -0.2248 T23: 0.0476 REMARK 3 L TENSOR REMARK 3 L11: 3.0031 L22: 3.4280 REMARK 3 L33: 1.4500 L12: 0.4773 REMARK 3 L13: 0.4051 L23: 0.1253 REMARK 3 S TENSOR REMARK 3 S11: 0.8056 S12: -0.5788 S13: 0.8930 REMARK 3 S21: 0.3795 S22: -1.0525 S23: -0.3974 REMARK 3 S31: -1.1617 S32: 0.9182 S33: 0.4816 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 121 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.6167 51.2853 34.4289 REMARK 3 T TENSOR REMARK 3 T11: 0.7494 T22: 0.6902 REMARK 3 T33: 0.7343 T12: 0.3015 REMARK 3 T13: -0.2086 T23: -0.2287 REMARK 3 L TENSOR REMARK 3 L11: 1.1740 L22: 0.1179 REMARK 3 L33: 1.6616 L12: -0.4741 REMARK 3 L13: 1.2579 L23: -0.6430 REMARK 3 S TENSOR REMARK 3 S11: -0.2889 S12: -0.9022 S13: 0.8912 REMARK 3 S21: -0.0999 S22: -0.1764 S23: 0.0184 REMARK 3 S31: -0.5688 S32: -1.1339 S33: 0.2667 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 172 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.3298 61.8388 18.1295 REMARK 3 T TENSOR REMARK 3 T11: 1.5415 T22: 0.0218 REMARK 3 T33: 1.5529 T12: 0.6875 REMARK 3 T13: -0.8490 T23: -0.2876 REMARK 3 L TENSOR REMARK 3 L11: 1.4903 L22: 0.6067 REMARK 3 L33: 1.3667 L12: 0.2640 REMARK 3 L13: 0.4026 L23: -0.1564 REMARK 3 S TENSOR REMARK 3 S11: -0.3325 S12: -0.0639 S13: 1.8569 REMARK 3 S21: -0.6553 S22: -0.7586 S23: 0.1210 REMARK 3 S31: -2.1384 S32: -0.5760 S33: -0.5270 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 195 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.0732 47.7381 26.4678 REMARK 3 T TENSOR REMARK 3 T11: 0.3217 T22: 0.6110 REMARK 3 T33: 0.3661 T12: 0.2374 REMARK 3 T13: -0.0526 T23: -0.1762 REMARK 3 L TENSOR REMARK 3 L11: 3.3900 L22: 3.1597 REMARK 3 L33: 3.2083 L12: -1.4412 REMARK 3 L13: 1.8306 L23: 0.1572 REMARK 3 S TENSOR REMARK 3 S11: -0.3462 S12: -0.8159 S13: 0.9559 REMARK 3 S21: 0.0014 S22: -0.2913 S23: 0.2301 REMARK 3 S31: -0.6195 S32: -1.1789 S33: 0.1926 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 227 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.1223 50.3249 23.6959 REMARK 3 T TENSOR REMARK 3 T11: 0.7597 T22: 0.4604 REMARK 3 T33: 0.5198 T12: 0.1664 REMARK 3 T13: -0.1092 T23: -0.0551 REMARK 3 L TENSOR REMARK 3 L11: 4.6714 L22: 2.7342 REMARK 3 L33: 3.5876 L12: -1.0218 REMARK 3 L13: 0.8718 L23: 0.3555 REMARK 3 S TENSOR REMARK 3 S11: -0.3962 S12: -0.3035 S13: 0.2631 REMARK 3 S21: 0.5275 S22: -0.0119 S23: -0.2878 REMARK 3 S31: -0.9531 S32: -0.5256 S33: 0.4165 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9R33 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-MAY-25. REMARK 100 THE DEPOSITION ID IS D_1292147422. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0647 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22435 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 66.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.85400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CRANK2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: MONOCLINIC MORPHOLOGY, WITH SLIGHT BLUE OR BROWN TINT TO REMARK 200 THE APPEARANCE. RESISTANT TO TOUCH. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS PH8.5, 20% GLYCEROL REMARK 280 ETHOXYLATE, 3% POLY ETHYLENE IMINE (MIDASPLUS, MD1-106, SUBWELL REMARK 280 H03), VAPOR DIFFUSION, TEMPERATURE 279.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 35.56250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.94450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 35.56250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 55.94450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -35.12345 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 66.53872 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -35.12345 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 66.53872 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 101 REMARK 465 LYS A 102 REMARK 465 HIS A 103 REMARK 465 HIS A 104 REMARK 465 HIS A 105 REMARK 465 HIS A 106 REMARK 465 MET B 101 REMARK 465 LYS B 102 REMARK 465 HIS B 103 REMARK 465 HIS B 104 REMARK 465 HIS B 105 REMARK 465 HIS B 106 REMARK 465 HIS B 107 REMARK 465 HIS B 108 REMARK 465 ALA B 230 REMARK 465 GLY B 231 REMARK 465 ALA B 232 REMARK 465 LYS B 233 REMARK 465 MET C 101 REMARK 465 LYS C 102 REMARK 465 HIS C 103 REMARK 465 HIS C 104 REMARK 465 HIS C 105 REMARK 465 ASN C 228 REMARK 465 SER C 229 REMARK 465 ALA C 230 REMARK 465 GLY C 231 REMARK 465 ALA C 232 REMARK 465 LYS C 233 REMARK 465 ASP C 234 REMARK 465 GLU C 235 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 212 -167.12 -100.85 REMARK 500 GLU B 119 -80.68 -78.94 REMARK 500 ASN B 212 -161.31 -107.51 REMARK 500 GLU C 119 -76.31 -67.81 REMARK 500 MET C 211 115.82 -164.18 REMARK 500 ASN C 212 -163.16 -105.57 REMARK 500 REMARK 500 REMARK: NULL DBREF 9R33 A 129 261 UNP P9WLZ9 Y1363_MYCTU 129 261 DBREF 9R33 B 129 261 UNP P9WLZ9 Y1363_MYCTU 129 261 DBREF 9R33 C 129 261 UNP P9WLZ9 Y1363_MYCTU 129 261 SEQADV 9R33 MET A 101 UNP P9WLZ9 INITIATING METHIONINE SEQADV 9R33 LYS A 102 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS A 103 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS A 104 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS A 105 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS A 106 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS A 107 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS A 108 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 PRO A 109 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 MET A 110 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 SER A 111 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ASP A 112 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 TYR A 113 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ASP A 114 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ILE A 115 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 PRO A 116 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 THR A 117 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 THR A 118 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 GLU A 119 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ASN A 120 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 LEU A 121 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 TYR A 122 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 PHE A 123 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 GLN A 124 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 GLY A 125 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ALA A 126 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 MET A 127 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ALA A 128 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 MET B 101 UNP P9WLZ9 INITIATING METHIONINE SEQADV 9R33 LYS B 102 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS B 103 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS B 104 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS B 105 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS B 106 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS B 107 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS B 108 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 PRO B 109 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 MET B 110 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 SER B 111 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ASP B 112 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 TYR B 113 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ASP B 114 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ILE B 115 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 PRO B 116 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 THR B 117 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 THR B 118 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 GLU B 119 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ASN B 120 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 LEU B 121 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 TYR B 122 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 PHE B 123 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 GLN B 124 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 GLY B 125 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ALA B 126 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 MET B 127 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ALA B 128 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 MET C 101 UNP P9WLZ9 INITIATING METHIONINE SEQADV 9R33 LYS C 102 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS C 103 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS C 104 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS C 105 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS C 106 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS C 107 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 HIS C 108 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 PRO C 109 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 MET C 110 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 SER C 111 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ASP C 112 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 TYR C 113 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ASP C 114 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ILE C 115 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 PRO C 116 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 THR C 117 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 THR C 118 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 GLU C 119 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ASN C 120 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 LEU C 121 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 TYR C 122 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 PHE C 123 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 GLN C 124 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 GLY C 125 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ALA C 126 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 MET C 127 UNP P9WLZ9 EXPRESSION TAG SEQADV 9R33 ALA C 128 UNP P9WLZ9 EXPRESSION TAG SEQRES 1 A 161 MET LYS HIS HIS HIS HIS HIS HIS PRO MET SER ASP TYR SEQRES 2 A 161 ASP ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA SEQRES 3 A 161 MET ALA GLN HIS HIS GLU ALA THR GLU ARG GLN GLN ARG SEQRES 4 A 161 ALA ALA ALA PHE ALA ALA GLY ALA LYS GLN GLY VAL ILE SEQRES 5 A 161 ASN MET THR SER LEU ASP PHE ASN LYS ALA LYS GLU ASP SEQRES 6 A 161 VAL ALA ARG VAL ILE ASP SER SER THR GLY GLU PHE ARG SEQRES 7 A 161 ASP ASP PHE GLN GLN ARG ALA ALA ASP PHE THR LYS VAL SEQRES 8 A 161 VAL GLU GLN SER LYS VAL VAL THR GLU GLY THR VAL ASN SEQRES 9 A 161 ALA THR ALA VAL GLU SER MET ASN GLU HIS SER ALA VAL SEQRES 10 A 161 VAL LEU VAL ALA ALA THR SER ARG VAL THR ASN SER ALA SEQRES 11 A 161 GLY ALA LYS ASP GLU PRO ARG ALA TRP ARG LEU LYS VAL SEQRES 12 A 161 THR VAL THR GLU GLU GLY GLY GLN TYR LYS MET SER LYS SEQRES 13 A 161 VAL GLU PHE VAL PRO SEQRES 1 B 161 MET LYS HIS HIS HIS HIS HIS HIS PRO MET SER ASP TYR SEQRES 2 B 161 ASP ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA SEQRES 3 B 161 MET ALA GLN HIS HIS GLU ALA THR GLU ARG GLN GLN ARG SEQRES 4 B 161 ALA ALA ALA PHE ALA ALA GLY ALA LYS GLN GLY VAL ILE SEQRES 5 B 161 ASN MET THR SER LEU ASP PHE ASN LYS ALA LYS GLU ASP SEQRES 6 B 161 VAL ALA ARG VAL ILE ASP SER SER THR GLY GLU PHE ARG SEQRES 7 B 161 ASP ASP PHE GLN GLN ARG ALA ALA ASP PHE THR LYS VAL SEQRES 8 B 161 VAL GLU GLN SER LYS VAL VAL THR GLU GLY THR VAL ASN SEQRES 9 B 161 ALA THR ALA VAL GLU SER MET ASN GLU HIS SER ALA VAL SEQRES 10 B 161 VAL LEU VAL ALA ALA THR SER ARG VAL THR ASN SER ALA SEQRES 11 B 161 GLY ALA LYS ASP GLU PRO ARG ALA TRP ARG LEU LYS VAL SEQRES 12 B 161 THR VAL THR GLU GLU GLY GLY GLN TYR LYS MET SER LYS SEQRES 13 B 161 VAL GLU PHE VAL PRO SEQRES 1 C 161 MET LYS HIS HIS HIS HIS HIS HIS PRO MET SER ASP TYR SEQRES 2 C 161 ASP ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA SEQRES 3 C 161 MET ALA GLN HIS HIS GLU ALA THR GLU ARG GLN GLN ARG SEQRES 4 C 161 ALA ALA ALA PHE ALA ALA GLY ALA LYS GLN GLY VAL ILE SEQRES 5 C 161 ASN MET THR SER LEU ASP PHE ASN LYS ALA LYS GLU ASP SEQRES 6 C 161 VAL ALA ARG VAL ILE ASP SER SER THR GLY GLU PHE ARG SEQRES 7 C 161 ASP ASP PHE GLN GLN ARG ALA ALA ASP PHE THR LYS VAL SEQRES 8 C 161 VAL GLU GLN SER LYS VAL VAL THR GLU GLY THR VAL ASN SEQRES 9 C 161 ALA THR ALA VAL GLU SER MET ASN GLU HIS SER ALA VAL SEQRES 10 C 161 VAL LEU VAL ALA ALA THR SER ARG VAL THR ASN SER ALA SEQRES 11 C 161 GLY ALA LYS ASP GLU PRO ARG ALA TRP ARG LEU LYS VAL SEQRES 12 C 161 THR VAL THR GLU GLU GLY GLY GLN TYR LYS MET SER LYS SEQRES 13 C 161 VAL GLU PHE VAL PRO FORMUL 4 HOH *78(H2 O) HELIX 1 AA1 PRO A 109 TYR A 113 5 5 HELIX 2 AA2 ASN A 120 SER A 156 1 37 HELIX 3 AA3 LYS A 161 SER A 172 1 12 HELIX 4 AA4 THR A 174 SER A 195 1 22 HELIX 5 AA5 ASN B 120 SER B 156 1 37 HELIX 6 AA6 ASP B 158 ASN B 160 5 3 HELIX 7 AA7 LYS B 161 SER B 172 1 12 HELIX 8 AA8 THR B 174 LYS B 196 1 23 HELIX 9 AA9 PRO C 109 ASP C 114 5 6 HELIX 10 AB1 ASN C 120 SER C 156 1 37 HELIX 11 AB2 LYS C 161 SER C 172 1 12 HELIX 12 AB3 THR C 174 SER C 195 1 22 SHEET 1 AA1 4 LEU A 157 ASP A 158 0 SHEET 2 AA1 4 VAL A 197 MET A 211 -1 O THR A 199 N LEU A 157 SHEET 3 AA1 4 SER A 215 ASN A 228 -1 O THR A 227 N VAL A 198 SHEET 4 AA1 4 ALA A 232 LYS A 233 -1 O ALA A 232 N ASN A 228 SHEET 1 AA2 5 LEU A 157 ASP A 158 0 SHEET 2 AA2 5 VAL A 197 MET A 211 -1 O THR A 199 N LEU A 157 SHEET 3 AA2 5 SER A 215 ASN A 228 -1 O THR A 227 N VAL A 198 SHEET 4 AA2 5 ARG A 237 GLU A 248 -1 O VAL A 243 N VAL A 218 SHEET 5 AA2 5 GLN A 251 PHE A 259 -1 O SER A 255 N THR A 244 SHEET 1 AA3 4 THR B 199 MET B 211 0 SHEET 2 AA3 4 SER B 215 VAL B 226 -1 O LEU B 219 N ALA B 207 SHEET 3 AA3 4 ARG B 237 GLU B 248 -1 O TRP B 239 N ALA B 222 SHEET 4 AA3 4 GLN B 251 PHE B 259 -1 O LYS B 256 N THR B 244 SHEET 1 AA4 4 THR C 199 MET C 211 0 SHEET 2 AA4 4 SER C 215 VAL C 226 -1 O LEU C 219 N ALA C 207 SHEET 3 AA4 4 ARG C 237 GLU C 248 -1 O VAL C 243 N VAL C 218 SHEET 4 AA4 4 GLN C 251 PHE C 259 -1 O LYS C 256 N THR C 244 CISPEP 1 HIS C 108 PRO C 109 0 1.81 CRYST1 71.125 111.889 75.240 90.00 117.83 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014060 0.000000 0.007422 0.00000 SCALE2 0.000000 0.008937 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015029 0.00000 MASTER 506 0 0 12 17 0 0 6 3576 3 0 39 END