HEADER TRANSCRIPTION 19-MAY-25 9R95 TITLE CRYO-EM STRUCTURE OF THE HUMAN MITOCHONDRIAL RNA POLYMERASE TITLE 2 TRANSCRIPTION INITIATION COMPLEX (POLRMT/TFAM/TFB2M/DNA/RNA) WITH A TITLE 3 SLIPPED 3-MER RNA, PPPGPGPA (SLIPPED IC3) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MTRPOL; COMPND 5 EC: 2.7.7.6; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DIMETHYLADENOSINE TRANSFERASE 2, MITOCHONDRIAL; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: HEPATITIS C VIRUS NS5A-TRANSACTIVATED PROTEIN 5,HCV NS5A- COMPND 11 TRANSACTIVATED PROTEIN 5,MITOCHONDRIAL 12S RRNA DIMETHYLASE 2, COMPND 12 MITOCHONDRIAL TRANSCRIPTION FACTOR B2,H-MTTFB,H-MTTFB2,HTFB2M,MTTFB2, COMPND 13 S-ADENOSYLMETHIONINE-6-N',N'-ADENOSYL(RRNA) DIMETHYLTRANSFERASE 2; COMPND 14 EC: 2.1.1.-; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 3; COMPND 17 MOLECULE: TRANSCRIPTION FACTOR A, MITOCHONDRIAL; COMPND 18 CHAIN: C; COMPND 19 SYNONYM: MTTFA,MITOCHONDRIAL TRANSCRIPTION FACTOR 1,MTTF1, COMPND 20 TRANSCRIPTION FACTOR 6,TCF-6,TRANSCRIPTION FACTOR 6-LIKE 2; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 4; COMPND 23 MOLECULE: RNA (5'-D(*(GTP))-R(P*GP*A)-3'); COMPND 24 CHAIN: R; COMPND 25 ENGINEERED: YES; COMPND 26 MOL_ID: 5; COMPND 27 MOLECULE: NON-TEMPLATE STRAND DNA (56-MER); COMPND 28 CHAIN: N; COMPND 29 ENGINEERED: YES; COMPND 30 MOL_ID: 6; COMPND 31 MOLECULE: TEMPLATE STRAND DNA (56-MER); COMPND 32 CHAIN: T; COMPND 33 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POLRMT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODONPLUS RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPROEXHTB; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: TFB2M, NS5ATP5; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 18 EXPRESSION_SYSTEM_VARIANT: ARCTICEXPRESS; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PT7TEV-HMBP4; SOURCE 21 MOL_ID: 3; SOURCE 22 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 23 ORGANISM_COMMON: HUMAN; SOURCE 24 ORGANISM_TAXID: 9606; SOURCE 25 GENE: TFAM, TCF6, TCF6L2; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 28 EXPRESSION_SYSTEM_VARIANT: CODONPLUS RIL; SOURCE 29 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 30 EXPRESSION_SYSTEM_PLASMID: PPROEXHTB; SOURCE 31 MOL_ID: 4; SOURCE 32 SYNTHETIC: YES; SOURCE 33 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 34 ORGANISM_TAXID: 32630; SOURCE 35 MOL_ID: 5; SOURCE 36 SYNTHETIC: YES; SOURCE 37 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 38 ORGANISM_TAXID: 32630; SOURCE 39 MOL_ID: 6; SOURCE 40 SYNTHETIC: YES; SOURCE 41 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 42 ORGANISM_TAXID: 32630 KEYWDS POLRMT, TFB2M, TFAM, TRANSCRIPTION, INITIATION, TRANSCRIPTION KEYWDS 2 INITIATION, POLYMERASE, H-MTRNAP, Y-MTRNAP, MTRNAP, RNA POLYMERASE, KEYWDS 3 MITOCHONDRIAL, MITOCHONDRIA, MITOCHONDRIAL DNA, DNA, RNA, SLIPPAGE EXPDTA ELECTRON MICROSCOPY AUTHOR Q.GOOVAERTS,J.SHEN,Y.AJJUGAL,B.DE WIJNGAERT,S.S.PATEL,K.DAS REVDAT 3 03-SEP-25 9R95 1 JRNL REVDAT 2 06-AUG-25 9R95 1 JRNL REVDAT 1 30-JUL-25 9R95 0 JRNL AUTH J.SHEN,Q.GOOVAERTS,Y.AJJUGAL,B.DE WIJNGAERT,K.DAS,S.S.PATEL JRNL TITL HUMAN MITOCHONDRIAL RNA POLYMERASE STRUCTURES REVEAL JRNL TITL 2 TRANSCRIPTION START SITE AND SLIPPAGE MECHANISM. JRNL REF MOL.CELL V. 85 3137 2025 JRNL REFN ISSN 1097-2765 JRNL PMID 40712586 JRNL DOI 10.1016/J.MOLCEL.2025.07.002 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, PHENIX, COOT REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : CORRELATION COEFFICIENT REMARK 3 OVERALL ANISOTROPIC B VALUE : 99.000 REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.200 REMARK 3 NUMBER OF PARTICLES : 169000 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9R95 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUN-25. REMARK 100 THE DEPOSITION ID IS D_1292148009. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HUMAN MITOCHONDRIAL RNA REMARK 245 POLYMERASE TRANSCRIPTION REMARK 245 INITIATION COMPLEX (POLRMT/TFAM/ REMARK 245 TFB2M/DNA/RNA) WITH A SLIPPED 3- REMARK 245 MER RNA, PPPGPGPA (SLIPPED IC3); REMARK 245 DNA-DIRECTED RNA POLYMERASE, REMARK 245 MITOCHONDRIAL; DNA (56-MER); REMARK 245 DIMETHYLADENOSINE TRANSFERASE 2, REMARK 245 MITOCHONDRIAL; TRANSCRIPTION REMARK 245 FACTOR A, MITOCHONDRIAL REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.20 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : INCUBATED ON THE GRID FOR 5 REMARK 245 SECONDS PRIOR TO DOUBLE SIDED REMARK 245 BLOTTING FOR 3.5 SECONDS AT REMARK 245 FORCE 1 REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS GLACIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 130000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, R, N, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 43 REMARK 465 ALA A 44 REMARK 465 SER A 45 REMARK 465 PRO A 46 REMARK 465 GLN A 47 REMARK 465 GLU A 48 REMARK 465 GLN A 49 REMARK 465 ASP A 50 REMARK 465 GLN A 51 REMARK 465 ASP A 52 REMARK 465 ARG A 53 REMARK 465 ARG A 54 REMARK 465 LYS A 55 REMARK 465 ASP A 56 REMARK 465 TRP A 57 REMARK 465 GLY A 58 REMARK 465 HIS A 59 REMARK 465 VAL A 60 REMARK 465 GLU A 61 REMARK 465 LEU A 62 REMARK 465 LEU A 63 REMARK 465 GLU A 64 REMARK 465 VAL A 65 REMARK 465 LEU A 66 REMARK 465 GLN A 67 REMARK 465 ALA A 68 REMARK 465 ARG A 69 REMARK 465 VAL A 70 REMARK 465 ARG A 71 REMARK 465 GLN A 72 REMARK 465 LEU A 73 REMARK 465 GLN A 74 REMARK 465 ALA A 75 REMARK 465 GLU A 76 REMARK 465 SER A 77 REMARK 465 VAL A 78 REMARK 465 SER A 79 REMARK 465 GLU A 80 REMARK 465 VAL A 81 REMARK 465 VAL A 82 REMARK 465 VAL A 83 REMARK 465 ASN A 84 REMARK 465 ARG A 85 REMARK 465 VAL A 86 REMARK 465 ASP A 87 REMARK 465 VAL A 88 REMARK 465 ALA A 89 REMARK 465 ARG A 90 REMARK 465 LEU A 91 REMARK 465 PRO A 92 REMARK 465 GLU A 93 REMARK 465 CYS A 94 REMARK 465 GLY A 95 REMARK 465 SER A 96 REMARK 465 GLY A 97 REMARK 465 ASP A 98 REMARK 465 GLY A 99 REMARK 465 SER A 100 REMARK 465 LEU A 101 REMARK 465 GLN A 102 REMARK 465 PRO A 103 REMARK 465 PRO A 104 REMARK 465 ARG A 105 REMARK 465 LYS A 106 REMARK 465 VAL A 107 REMARK 465 GLN A 108 REMARK 465 MET A 109 REMARK 465 GLY A 110 REMARK 465 ALA A 111 REMARK 465 LYS A 112 REMARK 465 ASP A 113 REMARK 465 ALA A 114 REMARK 465 THR A 115 REMARK 465 PRO A 116 REMARK 465 VAL A 117 REMARK 465 PRO A 118 REMARK 465 CYS A 119 REMARK 465 GLY A 120 REMARK 465 ARG A 121 REMARK 465 PRO A 147 REMARK 465 PHE A 148 REMARK 465 GLN A 149 REMARK 465 SER A 150 REMARK 465 GLY A 151 REMARK 465 GLU A 152 REMARK 465 PHE A 153 REMARK 465 LYS A 154 REMARK 465 ALA A 155 REMARK 465 LEU A 156 REMARK 465 THR A 157 REMARK 465 GLY A 200 REMARK 465 LYS A 201 REMARK 465 LEU A 202 REMARK 465 SER A 203 REMARK 465 LEU A 204 REMARK 465 ASP A 205 REMARK 465 VAL A 206 REMARK 465 GLU A 207 REMARK 465 GLN A 208 REMARK 465 ALA A 209 REMARK 465 PRO A 210 REMARK 465 SER A 211 REMARK 465 GLY A 212 REMARK 465 GLN A 213 REMARK 465 HIS A 214 REMARK 465 SER A 215 REMARK 465 GLN A 216 REMARK 465 PRO A 741 REMARK 465 PRO A 742 REMARK 465 GLU A 743 REMARK 465 ALA A 744 REMARK 465 HIS A 745 REMARK 465 LEU A 746 REMARK 465 PRO A 747 REMARK 465 HIS A 748 REMARK 465 SER A 749 REMARK 465 ALA A 750 REMARK 465 ALA A 751 REMARK 465 PRO A 752 REMARK 465 ALA A 753 REMARK 465 ARG A 754 REMARK 465 LYS A 755 REMARK 465 PRO B 60 REMARK 465 PRO B 61 REMARK 465 ARG B 62 REMARK 465 LYS B 63 REMARK 465 ALA B 64 REMARK 465 SER B 65 REMARK 465 LYS B 66 REMARK 465 ALA B 67 REMARK 465 SER B 68 REMARK 465 LEU B 69 REMARK 465 ASP B 70 REMARK 465 MET C 16 REMARK 465 SER C 17 REMARK 465 TYR C 18 REMARK 465 TYR C 19 REMARK 465 HIS C 20 REMARK 465 HIS C 21 REMARK 465 HIS C 22 REMARK 465 HIS C 23 REMARK 465 HIS C 24 REMARK 465 HIS C 25 REMARK 465 ASP C 26 REMARK 465 TYR C 27 REMARK 465 ASP C 28 REMARK 465 ILE C 29 REMARK 465 PRO C 30 REMARK 465 THR C 31 REMARK 465 THR C 32 REMARK 465 GLU C 33 REMARK 465 ASN C 34 REMARK 465 LEU C 35 REMARK 465 TYR C 36 REMARK 465 PHE C 37 REMARK 465 GLN C 38 REMARK 465 GLY C 39 REMARK 465 ALA C 40 REMARK 465 MET C 41 REMARK 465 GLY C 42 REMARK 465 GLN C 171 REMARK 465 GLU C 172 REMARK 465 ALA C 173 REMARK 465 LYS C 174 REMARK 465 GLY C 175 REMARK 465 ASP C 176 REMARK 465 ASN C 191 REMARK 465 LEU C 192 REMARK 465 SER C 193 REMARK 465 ASP C 194 REMARK 465 SER C 195 REMARK 465 GLU C 196 REMARK 465 LYS C 197 REMARK 465 ARG C 232 REMARK 465 ARG C 233 REMARK 465 THR C 234 REMARK 465 ILE C 235 REMARK 465 LYS C 236 REMARK 465 LYS C 237 REMARK 465 GLN C 238 REMARK 465 ARG C 239 REMARK 465 LYS C 240 REMARK 465 TYR C 241 REMARK 465 GLY C 242 REMARK 465 ALA C 243 REMARK 465 GLU C 244 REMARK 465 GLU C 245 REMARK 465 DA N -3 REMARK 465 DT N -2 REMARK 465 DG N -1 REMARK 465 DT N 0 REMARK 465 DG N 1 REMARK 465 DT N 51 REMARK 465 DG N 52 REMARK 465 DC T -1 REMARK 465 DA T 0 REMARK 465 DC T 50 REMARK 465 DA T 51 REMARK 465 DC T 52 REMARK 465 DA T 53 REMARK 465 DT T 54 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 127 CG CD OE1 OE2 REMARK 470 LYS A 141 CG CD CE NZ REMARK 470 GLN A 145 CG CD OE1 NE2 REMARK 470 ARG A 193 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 196 CG CD OE1 NE2 REMARK 470 GLU A 317 CG CD OE1 OE2 REMARK 470 ASP A 381 CG OD1 OD2 REMARK 470 ARG A 383 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 972 CG CD OE1 NE2 REMARK 470 ILE A1106 CG1 CG2 CD1 REMARK 470 GLU A1177 CG CD OE1 OE2 REMARK 470 PHE B 71 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 82 CG CD OE1 OE2 REMARK 470 ARG B 94 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 138 CG CD CE NZ REMARK 470 ASN B 139 CG OD1 ND2 REMARK 470 LEU B 140 CG CD1 CD2 REMARK 470 ASP B 141 CG OD1 OD2 REMARK 470 GLU B 200 CG CD OE1 OE2 REMARK 470 GLU B 231 CG CD OE1 OE2 REMARK 470 GLU B 233 CG CD OE1 OE2 REMARK 470 ASP B 240 CG OD1 OD2 REMARK 470 TRP B 268 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 268 CZ3 CH2 REMARK 470 SER B 269 OG REMARK 470 SER B 270 OG REMARK 470 ASP B 272 CG OD1 OD2 REMARK 470 ILE B 273 CG1 CG2 CD1 REMARK 470 ARG B 276 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 277 CG CD CE NZ REMARK 470 GLU B 281 CG CD OE1 OE2 REMARK 470 LEU B 289 CG CD1 CD2 REMARK 470 GLN B 291 CG CD OE1 NE2 REMARK 470 LEU C 65 CG CD1 CD2 REMARK 470 ILE C 81 CG1 CG2 CD1 REMARK 470 ARG C 83 CG CD NE CZ NH1 NH2 REMARK 470 ILE C 84 CG1 CG2 CD1 REMARK 470 ARG C 89 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 91 CG CD1 CD2 REMARK 470 ILE C 114 CG1 CG2 CD1 REMARK 470 PHE C 117 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE C 126 CG1 CG2 CD1 REMARK 470 ARG C 140 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 146 CG CD CE NZ REMARK 470 LYS C 147 CG CD CE NZ REMARK 470 ARG C 157 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 159 CG CD NE CZ NH1 NH2 REMARK 470 TYR C 162 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL C 164 CG1 CG2 REMARK 470 TYR C 165 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE C 170 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN C 179 CG CD OE1 NE2 REMARK 470 LEU C 182 CG CD1 CD2 REMARK 470 LYS C 183 CG CD CE NZ REMARK 470 LYS C 186 CG CD CE NZ REMARK 470 TRP C 189 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 189 CZ3 CH2 REMARK 470 LYS C 190 CG CD CE NZ REMARK 470 GLU C 198 CG CD OE1 OE2 REMARK 470 LEU C 199 CG CD1 CD2 REMARK 470 TYR C 200 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 530 O PRO A 651 2.12 REMARK 500 OH TYR A 1082 OP1 DC T 11 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GTP R 1 C3' - O3' - P ANGL. DEV. = -7.5 DEGREES REMARK 500 DT N 7 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 184 48.50 -93.62 REMARK 500 SER A 185 109.90 -49.38 REMARK 500 ALA A 198 66.43 38.39 REMARK 500 ASP A 295 -168.92 -129.83 REMARK 500 ASP A 540 32.17 -99.34 REMARK 500 HIS A 597 -3.46 68.24 REMARK 500 ASN A 614 -108.23 55.91 REMARK 500 PRO A 658 -6.68 -59.43 REMARK 500 ALA A 662 -116.06 63.37 REMARK 500 CYS A 726 88.90 -155.40 REMARK 500 SER A1018 -60.05 -93.18 REMARK 500 PRO A1081 56.17 -94.15 REMARK 500 HIS A1150 -66.77 60.34 REMARK 500 ARG B 94 72.17 52.42 REMARK 500 ASN B 103 72.11 52.52 REMARK 500 ASP B 155 72.58 58.00 REMARK 500 ALA B 185 -169.19 -79.03 REMARK 500 SER B 216 -129.79 62.05 REMARK 500 LEU B 280 77.61 -100.05 REMARK 500 LEU B 292 32.58 -97.75 REMARK 500 ASN B 306 30.26 -95.88 REMARK 500 LEU B 312 58.07 -94.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-51727 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-51728 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-51729 RELATED DB: EMDB REMARK 900 RELATED ID: 9GZM RELATED DB: PDB REMARK 900 RELATED ID: 9GZN RELATED DB: PDB REMARK 900 RELATED ID: 9GZO RELATED DB: PDB REMARK 900 RELATED ID: EMD-53853 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF THE HUMAN MITOCHONDRIAL RNA POLYMERASE REMARK 900 TRANSCRIPTION INITIATION COMPLEX (POLRMT/TFAM/TFB2M/DNA/RNA) WITH A REMARK 900 SLIPPED 3-MER RNA, PPPGPGPA (SLIPPED IC3) REMARK 900 RELATED ID: EMD-53854 RELATED DB: EMDB REMARK 900 RELATED ID: 9R96 RELATED DB: PDB DBREF 9R95 A 43 1230 UNP O00411 RPOM_HUMAN 43 1230 DBREF 9R95 B 60 396 UNP Q9H5Q4 TFB2M_HUMAN 60 396 DBREF 9R95 C 43 245 UNP Q00059 TFAM_HUMAN 43 245 DBREF 9R95 R 1 3 PDB 9R95 9R95 1 3 DBREF 9R95 N -3 52 PDB 9R95 9R95 -3 52 DBREF 9R95 T -1 54 PDB 9R95 9R95 -1 54 SEQADV 9R95 MET C 16 UNP Q00059 INITIATING METHIONINE SEQADV 9R95 SER C 17 UNP Q00059 EXPRESSION TAG SEQADV 9R95 TYR C 18 UNP Q00059 EXPRESSION TAG SEQADV 9R95 TYR C 19 UNP Q00059 EXPRESSION TAG SEQADV 9R95 HIS C 20 UNP Q00059 EXPRESSION TAG SEQADV 9R95 HIS C 21 UNP Q00059 EXPRESSION TAG SEQADV 9R95 HIS C 22 UNP Q00059 EXPRESSION TAG SEQADV 9R95 HIS C 23 UNP Q00059 EXPRESSION TAG SEQADV 9R95 HIS C 24 UNP Q00059 EXPRESSION TAG SEQADV 9R95 HIS C 25 UNP Q00059 EXPRESSION TAG SEQADV 9R95 ASP C 26 UNP Q00059 EXPRESSION TAG SEQADV 9R95 TYR C 27 UNP Q00059 EXPRESSION TAG SEQADV 9R95 ASP C 28 UNP Q00059 EXPRESSION TAG SEQADV 9R95 ILE C 29 UNP Q00059 EXPRESSION TAG SEQADV 9R95 PRO C 30 UNP Q00059 EXPRESSION TAG SEQADV 9R95 THR C 31 UNP Q00059 EXPRESSION TAG SEQADV 9R95 THR C 32 UNP Q00059 EXPRESSION TAG SEQADV 9R95 GLU C 33 UNP Q00059 EXPRESSION TAG SEQADV 9R95 ASN C 34 UNP Q00059 EXPRESSION TAG SEQADV 9R95 LEU C 35 UNP Q00059 EXPRESSION TAG SEQADV 9R95 TYR C 36 UNP Q00059 EXPRESSION TAG SEQADV 9R95 PHE C 37 UNP Q00059 EXPRESSION TAG SEQADV 9R95 GLN C 38 UNP Q00059 EXPRESSION TAG SEQADV 9R95 GLY C 39 UNP Q00059 EXPRESSION TAG SEQADV 9R95 ALA C 40 UNP Q00059 EXPRESSION TAG SEQADV 9R95 MET C 41 UNP Q00059 EXPRESSION TAG SEQADV 9R95 GLY C 42 UNP Q00059 EXPRESSION TAG SEQRES 1 A 1188 SER ALA SER PRO GLN GLU GLN ASP GLN ASP ARG ARG LYS SEQRES 2 A 1188 ASP TRP GLY HIS VAL GLU LEU LEU GLU VAL LEU GLN ALA SEQRES 3 A 1188 ARG VAL ARG GLN LEU GLN ALA GLU SER VAL SER GLU VAL SEQRES 4 A 1188 VAL VAL ASN ARG VAL ASP VAL ALA ARG LEU PRO GLU CYS SEQRES 5 A 1188 GLY SER GLY ASP GLY SER LEU GLN PRO PRO ARG LYS VAL SEQRES 6 A 1188 GLN MET GLY ALA LYS ASP ALA THR PRO VAL PRO CYS GLY SEQRES 7 A 1188 ARG TRP ALA LYS ILE LEU GLU LYS ASP LYS ARG THR GLN SEQRES 8 A 1188 GLN MET ARG MET GLN ARG LEU LYS ALA LYS LEU GLN MET SEQRES 9 A 1188 PRO PHE GLN SER GLY GLU PHE LYS ALA LEU THR ARG ARG SEQRES 10 A 1188 LEU GLN VAL GLU PRO ARG LEU LEU SER LYS GLN MET ALA SEQRES 11 A 1188 GLY CYS LEU GLU ASP CYS THR ARG GLN ALA PRO GLU SER SEQRES 12 A 1188 PRO TRP GLU GLU GLN LEU ALA ARG LEU LEU GLN GLU ALA SEQRES 13 A 1188 PRO GLY LYS LEU SER LEU ASP VAL GLU GLN ALA PRO SER SEQRES 14 A 1188 GLY GLN HIS SER GLN ALA GLN LEU SER GLY GLN GLN GLN SEQRES 15 A 1188 ARG LEU LEU ALA PHE PHE LYS CYS CYS LEU LEU THR ASP SEQRES 16 A 1188 GLN LEU PRO LEU ALA HIS HIS LEU LEU VAL VAL HIS HIS SEQRES 17 A 1188 GLY GLN ARG GLN LYS ARG LYS LEU LEU THR LEU ASP MET SEQRES 18 A 1188 TYR ASN ALA VAL MET LEU GLY TRP ALA ARG GLN GLY ALA SEQRES 19 A 1188 PHE LYS GLU LEU VAL TYR VAL LEU PHE MET VAL LYS ASP SEQRES 20 A 1188 ALA GLY LEU THR PRO ASP LEU LEU SER TYR ALA ALA ALA SEQRES 21 A 1188 LEU GLN CYS MET GLY ARG GLN ASP GLN ASP ALA GLY THR SEQRES 22 A 1188 ILE GLU ARG CYS LEU GLU GLN MET SER GLN GLU GLY LEU SEQRES 23 A 1188 LYS LEU GLN ALA LEU PHE THR ALA VAL LEU LEU SER GLU SEQRES 24 A 1188 GLU ASP ARG ALA THR VAL LEU LYS ALA VAL HIS LYS VAL SEQRES 25 A 1188 LYS PRO THR PHE SER LEU PRO PRO GLN LEU PRO PRO PRO SEQRES 26 A 1188 VAL ASN THR SER LYS LEU LEU ARG ASP VAL TYR ALA LYS SEQRES 27 A 1188 ASP GLY ARG VAL SER TYR PRO LYS LEU HIS LEU PRO LEU SEQRES 28 A 1188 LYS THR LEU GLN CYS LEU PHE GLU LYS GLN LEU HIS MET SEQRES 29 A 1188 GLU LEU ALA SER ARG VAL CYS VAL VAL SER VAL GLU LYS SEQRES 30 A 1188 PRO THR LEU PRO SER LYS GLU VAL LYS HIS ALA ARG LYS SEQRES 31 A 1188 THR LEU LYS THR LEU ARG ASP GLN TRP GLU LYS ALA LEU SEQRES 32 A 1188 CYS ARG ALA LEU ARG GLU THR LYS ASN ARG LEU GLU ARG SEQRES 33 A 1188 GLU VAL TYR GLU GLY ARG PHE SER LEU TYR PRO PHE LEU SEQRES 34 A 1188 CYS LEU LEU ASP GLU ARG GLU VAL VAL ARG MET LEU LEU SEQRES 35 A 1188 GLN VAL LEU GLN ALA LEU PRO ALA GLN GLY GLU SER PHE SEQRES 36 A 1188 THR THR LEU ALA ARG GLU LEU SER ALA ARG THR PHE SER SEQRES 37 A 1188 ARG HIS VAL VAL GLN ARG GLN ARG VAL SER GLY GLN VAL SEQRES 38 A 1188 GLN ALA LEU GLN ASN HIS TYR ARG LYS TYR LEU CYS LEU SEQRES 39 A 1188 LEU ALA SER ASP ALA GLU VAL PRO GLU PRO CYS LEU PRO SEQRES 40 A 1188 ARG GLN TYR TRP GLU GLU LEU GLY ALA PRO GLU ALA LEU SEQRES 41 A 1188 ARG GLU GLN PRO TRP PRO LEU PRO VAL GLN MET GLU LEU SEQRES 42 A 1188 GLY LYS LEU LEU ALA GLU MET LEU VAL GLN ALA THR GLN SEQRES 43 A 1188 MET PRO CYS SER LEU ASP LYS PRO HIS ARG SER SER ARG SEQRES 44 A 1188 LEU VAL PRO VAL LEU TYR HIS VAL TYR SER PHE ARG ASN SEQRES 45 A 1188 VAL GLN GLN ILE GLY ILE LEU LYS PRO HIS PRO ALA TYR SEQRES 46 A 1188 VAL GLN LEU LEU GLU LYS ALA ALA GLU PRO THR LEU THR SEQRES 47 A 1188 PHE GLU ALA VAL ASP VAL PRO MET LEU CYS PRO PRO LEU SEQRES 48 A 1188 PRO TRP THR SER PRO HIS SER GLY ALA PHE LEU LEU SER SEQRES 49 A 1188 PRO THR LYS LEU MET ARG THR VAL GLU GLY ALA THR GLN SEQRES 50 A 1188 HIS GLN GLU LEU LEU GLU THR CYS PRO PRO THR ALA LEU SEQRES 51 A 1188 HIS GLY ALA LEU ASP ALA LEU THR GLN LEU GLY ASN CYS SEQRES 52 A 1188 ALA TRP ARG VAL ASN GLY ARG VAL LEU ASP LEU VAL LEU SEQRES 53 A 1188 GLN LEU PHE GLN ALA LYS GLY CYS PRO GLN LEU GLY VAL SEQRES 54 A 1188 PRO ALA PRO PRO SER GLU ALA PRO GLN PRO PRO GLU ALA SEQRES 55 A 1188 HIS LEU PRO HIS SER ALA ALA PRO ALA ARG LYS ALA GLU SEQRES 56 A 1188 LEU ARG ARG GLU LEU ALA HIS CYS GLN LYS VAL ALA ARG SEQRES 57 A 1188 GLU MET HIS SER LEU ARG ALA GLU ALA LEU TYR ARG LEU SEQRES 58 A 1188 SER LEU ALA GLN HIS LEU ARG ASP ARG VAL PHE TRP LEU SEQRES 59 A 1188 PRO HIS ASN MET ASP PHE ARG GLY ARG THR TYR PRO CYS SEQRES 60 A 1188 PRO PRO HIS PHE ASN HIS LEU GLY SER ASP VAL ALA ARG SEQRES 61 A 1188 ALA LEU LEU GLU PHE ALA GLN GLY ARG PRO LEU GLY PRO SEQRES 62 A 1188 HIS GLY LEU ASP TRP LEU LYS ILE HIS LEU VAL ASN LEU SEQRES 63 A 1188 THR GLY LEU LYS LYS ARG GLU PRO LEU ARG LYS ARG LEU SEQRES 64 A 1188 ALA PHE ALA GLU GLU VAL MET ASP ASP ILE LEU ASP SER SEQRES 65 A 1188 ALA ASP GLN PRO LEU THR GLY ARG LYS TRP TRP MET GLY SEQRES 66 A 1188 ALA GLU GLU PRO TRP GLN THR LEU ALA CYS CYS MET GLU SEQRES 67 A 1188 VAL ALA ASN ALA VAL ARG ALA SER ASP PRO ALA ALA TYR SEQRES 68 A 1188 VAL SER HIS LEU PRO VAL HIS GLN ASP GLY SER CYS ASN SEQRES 69 A 1188 GLY LEU GLN HIS TYR ALA ALA LEU GLY ARG ASP SER VAL SEQRES 70 A 1188 GLY ALA ALA SER VAL ASN LEU GLU PRO SER ASP VAL PRO SEQRES 71 A 1188 GLN ASP VAL TYR SER GLY VAL ALA ALA GLN VAL GLU VAL SEQRES 72 A 1188 PHE ARG ARG GLN ASP ALA GLN ARG GLY MET ARG VAL ALA SEQRES 73 A 1188 GLN VAL LEU GLU GLY PHE ILE THR ARG LYS VAL VAL LYS SEQRES 74 A 1188 GLN THR VAL MET THR VAL VAL TYR GLY VAL THR ARG TYR SEQRES 75 A 1188 GLY GLY ARG LEU GLN ILE GLU LYS ARG LEU ARG GLU LEU SEQRES 76 A 1188 SER ASP PHE PRO GLN GLU PHE VAL TRP GLU ALA SER HIS SEQRES 77 A 1188 TYR LEU VAL ARG GLN VAL PHE LYS SER LEU GLN GLU MET SEQRES 78 A 1188 PHE SER GLY THR ARG ALA ILE GLN HIS TRP LEU THR GLU SEQRES 79 A 1188 SER ALA ARG LEU ILE SER HIS MET GLY SER VAL VAL GLU SEQRES 80 A 1188 TRP VAL THR PRO LEU GLY VAL PRO VAL ILE GLN PRO TYR SEQRES 81 A 1188 ARG LEU ASP SER LYS VAL LYS GLN ILE GLY GLY GLY ILE SEQRES 82 A 1188 GLN SER ILE THR TYR THR HIS ASN GLY ASP ILE SER ARG SEQRES 83 A 1188 LYS PRO ASN THR ARG LYS GLN LYS ASN GLY PHE PRO PRO SEQRES 84 A 1188 ASN PHE ILE HIS SER LEU ASP SER SER HIS MET MET LEU SEQRES 85 A 1188 THR ALA LEU HIS CYS TYR ARG LYS GLY LEU THR PHE VAL SEQRES 86 A 1188 SER VAL HIS ASP CYS TYR TRP THR HIS ALA ALA ASP VAL SEQRES 87 A 1188 SER VAL MET ASN GLN VAL CYS ARG GLU GLN PHE VAL ARG SEQRES 88 A 1188 LEU HIS SER GLU PRO ILE LEU GLN ASP LEU SER ARG PHE SEQRES 89 A 1188 LEU VAL LYS ARG PHE CYS SER GLU PRO GLN LYS ILE LEU SEQRES 90 A 1188 GLU ALA SER GLN LEU LYS GLU THR LEU GLN ALA VAL PRO SEQRES 91 A 1188 LYS PRO GLY ALA PHE ASP LEU GLU GLN VAL LYS ARG SER SEQRES 92 A 1188 THR TYR PHE PHE SER SEQRES 1 B 337 PRO PRO ARG LYS ALA SER LYS ALA SER LEU ASP PHE LYS SEQRES 2 B 337 ARG TYR VAL THR ASP ARG ARG LEU ALA GLU THR LEU ALA SEQRES 3 B 337 GLN ILE TYR LEU GLY LYS PRO SER ARG PRO PRO HIS LEU SEQRES 4 B 337 LEU LEU GLU CYS ASN PRO GLY PRO GLY ILE LEU THR GLN SEQRES 5 B 337 ALA LEU LEU GLU ALA GLY ALA LYS VAL VAL ALA LEU GLU SEQRES 6 B 337 SER ASP LYS THR PHE ILE PRO HIS LEU GLU SER LEU GLY SEQRES 7 B 337 LYS ASN LEU ASP GLY LYS LEU ARG VAL ILE HIS CYS ASP SEQRES 8 B 337 PHE PHE LYS LEU ASP PRO ARG SER GLY GLY VAL ILE LYS SEQRES 9 B 337 PRO PRO ALA MET SER SER ARG GLY LEU PHE LYS ASN LEU SEQRES 10 B 337 GLY ILE GLU ALA VAL PRO TRP THR ALA ASP ILE PRO LEU SEQRES 11 B 337 LYS VAL VAL GLY MET PHE PRO SER ARG GLY GLU LYS ARG SEQRES 12 B 337 ALA LEU TRP LYS LEU ALA TYR ASP LEU TYR SER CYS THR SEQRES 13 B 337 SER ILE TYR LYS PHE GLY ARG ILE GLU VAL ASN MET PHE SEQRES 14 B 337 ILE GLY GLU LYS GLU PHE GLN LYS LEU MET ALA ASP PRO SEQRES 15 B 337 GLY ASN PRO ASP LEU TYR HIS VAL LEU SER VAL ILE TRP SEQRES 16 B 337 GLN LEU ALA CYS GLU ILE LYS VAL LEU HIS MET GLU PRO SEQRES 17 B 337 TRP SER SER PHE ASP ILE TYR THR ARG LYS GLY PRO LEU SEQRES 18 B 337 GLU ASN PRO LYS ARG ARG GLU LEU LEU ASP GLN LEU GLN SEQRES 19 B 337 GLN LYS LEU TYR LEU ILE GLN MET ILE PRO ARG GLN ASN SEQRES 20 B 337 LEU PHE THR LYS ASN LEU THR PRO MET ASN TYR ASN ILE SEQRES 21 B 337 PHE PHE HIS LEU LEU LYS HIS CYS PHE GLY ARG ARG SER SEQRES 22 B 337 ALA THR VAL ILE ASP HIS LEU ARG SER LEU THR PRO LEU SEQRES 23 B 337 ASP ALA ARG ASP ILE LEU MET GLN ILE GLY LYS GLN GLU SEQRES 24 B 337 ASP GLU LYS VAL VAL ASN MET HIS PRO GLN ASP PHE LYS SEQRES 25 B 337 THR LEU PHE GLU THR ILE GLU ARG SER LYS ASP CYS ALA SEQRES 26 B 337 TYR LYS TRP LEU TYR ASP GLU THR LEU GLU ASP ARG SEQRES 1 C 230 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 C 230 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 C 230 GLY SER SER VAL LEU ALA SER CYS PRO LYS LYS PRO VAL SEQRES 4 C 230 SER SER TYR LEU ARG PHE SER LYS GLU GLN LEU PRO ILE SEQRES 5 C 230 PHE LYS ALA GLN ASN PRO ASP ALA LYS THR THR GLU LEU SEQRES 6 C 230 ILE ARG ARG ILE ALA GLN ARG TRP ARG GLU LEU PRO ASP SEQRES 7 C 230 SER LYS LYS LYS ILE TYR GLN ASP ALA TYR ARG ALA GLU SEQRES 8 C 230 TRP GLN VAL TYR LYS GLU GLU ILE SER ARG PHE LYS GLU SEQRES 9 C 230 GLN LEU THR PRO SER GLN ILE MET SER LEU GLU LYS GLU SEQRES 10 C 230 ILE MET ASP LYS HIS LEU LYS ARG LYS ALA MET THR LYS SEQRES 11 C 230 LYS LYS GLU LEU THR LEU LEU GLY LYS PRO LYS ARG PRO SEQRES 12 C 230 ARG SER ALA TYR ASN VAL TYR VAL ALA GLU ARG PHE GLN SEQRES 13 C 230 GLU ALA LYS GLY ASP SER PRO GLN GLU LYS LEU LYS THR SEQRES 14 C 230 VAL LYS GLU ASN TRP LYS ASN LEU SER ASP SER GLU LYS SEQRES 15 C 230 GLU LEU TYR ILE GLN HIS ALA LYS GLU ASP GLU THR ARG SEQRES 16 C 230 TYR HIS ASN GLU MET LYS SER TRP GLU GLU GLN MET ILE SEQRES 17 C 230 GLU VAL GLY ARG LYS ASP LEU LEU ARG ARG THR ILE LYS SEQRES 18 C 230 LYS GLN ARG LYS TYR GLY ALA GLU GLU SEQRES 1 R 3 GTP G A SEQRES 1 N 56 DA DT DG DT DG DT DT DA DG DT DT DG DG SEQRES 2 N 56 DG DG DG DG DT DG DA DC DT DG DT DT DA SEQRES 3 N 56 DA DA DA DG DT DG DC DA DT DA DC DC DG SEQRES 4 N 56 DA DA DC DA DA DA DG DA DT DA DA DA DA SEQRES 5 N 56 DT DT DT DG SEQRES 1 T 56 DC DA DA DA DT DT DT DT DA DT DC DT DC SEQRES 2 T 56 DC DA DG DG DC DG DG DT DA DT DG DC DA SEQRES 3 T 56 DC DT DT DT DT DA DA DC DA DG DT DC DA SEQRES 4 T 56 DC DC DC DC DC DC DA DA DC DT DA DA DC SEQRES 5 T 56 DA DC DA DT HET GTP R 1 32 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE FORMUL 4 GTP C10 H16 N5 O14 P3 HELIX 1 AA1 TRP A 122 MET A 146 1 25 HELIX 2 AA2 SER A 168 GLN A 181 1 14 HELIX 3 AA3 TRP A 187 ALA A 198 1 12 HELIX 4 AA4 SER A 220 ASP A 237 1 18 HELIX 5 AA5 GLN A 238 GLN A 252 1 15 HELIX 6 AA6 GLN A 254 LEU A 258 5 5 HELIX 7 AA7 THR A 260 ARG A 273 1 14 HELIX 8 AA8 PHE A 277 ALA A 290 1 14 HELIX 9 AA9 ASP A 295 ASP A 310 1 16 HELIX 10 AB1 ASP A 312 GLU A 326 1 15 HELIX 11 AB2 LYS A 329 PHE A 334 1 6 HELIX 12 AB3 SER A 340 LYS A 355 1 16 HELIX 13 AB4 PRO A 392 SER A 410 1 19 HELIX 14 AB5 SER A 424 GLU A 462 1 39 HELIX 15 AB6 LEU A 467 LEU A 473 1 7 HELIX 16 AB7 ASP A 475 LEU A 490 1 16 HELIX 17 AB8 PHE A 497 GLY A 521 1 25 HELIX 18 AB9 GLY A 521 LEU A 534 1 14 HELIX 19 AC1 CYS A 535 LEU A 537 5 3 HELIX 20 AC2 LEU A 548 LEU A 556 1 9 HELIX 21 AC3 PRO A 568 THR A 587 1 20 HELIX 22 AC4 HIS A 624 ALA A 635 1 12 HELIX 23 AC5 VAL A 644 VAL A 646 5 3 HELIX 24 AC6 THR A 678 CYS A 687 1 10 HELIX 25 AC7 PRO A 688 ALA A 691 5 4 HELIX 26 AC8 LEU A 692 ASN A 704 1 13 HELIX 27 AC9 GLY A 711 LYS A 724 1 14 HELIX 28 AD1 GLU A 757 LEU A 789 1 33 HELIX 29 AD2 SER A 818 ALA A 823 1 6 HELIX 30 AD3 GLY A 837 GLY A 850 1 14 HELIX 31 AD4 PRO A 856 VAL A 867 1 12 HELIX 32 AD5 VAL A 867 GLN A 877 1 11 HELIX 33 AD6 TRP A 884 ALA A 888 5 5 HELIX 34 AD7 GLU A 890 ALA A 907 1 18 HELIX 35 AD8 CYS A 925 ARG A 936 1 12 HELIX 36 AD9 ASP A 937 SER A 943 1 7 HELIX 37 AE1 ASP A 954 GLY A 974 1 21 HELIX 38 AE2 MET A 975 LEU A 981 1 7 HELIX 39 AE3 THR A 986 VAL A 997 1 12 HELIX 40 AE4 VAL A 998 GLY A 1000 5 3 HELIX 41 AE5 TYR A 1004 LEU A 1017 1 14 HELIX 42 AE6 PHE A 1024 PHE A 1044 1 21 HELIX 43 AE7 SER A 1045 MET A 1064 1 20 HELIX 44 AE8 ASN A 1111 LYS A 1116 1 6 HELIX 45 AE9 GLY A 1118 ARG A 1141 1 24 HELIX 46 AF1 ASP A 1159 GLU A 1177 1 19 HELIX 47 AF2 PRO A 1178 PHE A 1191 1 14 HELIX 48 AF3 ILE A 1198 GLN A 1209 1 12 HELIX 49 AF4 ASP A 1218 SER A 1225 5 8 HELIX 50 AF5 ASP B 77 GLY B 90 1 14 HELIX 51 AF6 GLY B 107 GLY B 117 1 11 HELIX 52 AF7 PHE B 129 GLY B 137 1 9 HELIX 53 AF8 SER B 168 GLY B 177 1 10 HELIX 54 AF9 GLY B 199 SER B 213 1 15 HELIX 55 AG1 THR B 215 GLY B 221 5 7 HELIX 56 AG2 GLY B 230 MET B 238 1 9 HELIX 57 AG3 HIS B 248 LEU B 256 1 9 HELIX 58 AG4 PRO B 267 PHE B 271 5 5 HELIX 59 AG5 ASN B 282 LEU B 292 1 11 HELIX 60 AG6 ASN B 316 PHE B 328 1 13 HELIX 61 AG7 THR B 334 THR B 343 1 10 HELIX 62 AG8 ASP B 346 GLY B 355 1 10 HELIX 63 AG9 LYS B 361 MET B 365 5 5 HELIX 64 AH1 HIS B 366 SER B 380 1 15 HELIX 65 AH2 ASP B 390 GLU B 394 5 5 HELIX 66 AH3 SER C 44 CYS C 49 1 6 HELIX 67 AH4 SER C 55 ASN C 72 1 18 HELIX 68 AH5 LYS C 76 LEU C 91 1 16 HELIX 69 AH6 PRO C 92 LEU C 121 1 30 HELIX 70 AH7 THR C 122 LEU C 151 1 30 HELIX 71 AH8 SER C 160 PHE C 170 1 11 HELIX 72 AH9 PRO C 178 LYS C 190 1 13 HELIX 73 AI1 LEU C 199 GLY C 226 1 28 SHEET 1 AA1 2 ARG A 411 VAL A 415 0 SHEET 2 AA1 2 THR A 638 GLU A 642 -1 O PHE A 641 N VAL A 412 SHEET 1 AA2 3 GLU A 495 SER A 496 0 SHEET 2 AA2 3 GLN A 616 PRO A 623 -1 O LEU A 621 N GLU A 495 SHEET 3 AA2 3 LEU A 606 ARG A 613 -1 N VAL A 609 O ILE A 620 SHEET 1 AA3 2 GLN A 588 PRO A 590 0 SHEET 2 AA3 2 LEU A 602 PRO A 604 -1 O VAL A 603 N MET A 589 SHEET 1 AA4 2 TRP A 707 VAL A 709 0 SHEET 2 AA4 2 LEU A 825 PHE A 827 -1 O GLU A 826 N ARG A 708 SHEET 1 AA5 2 HIS A 798 MET A 800 0 SHEET 2 AA5 2 THR A 806 PRO A 808 -1 O TYR A 807 N ASN A 799 SHEET 1 AA6 2 ARG A 831 PRO A 832 0 SHEET 2 AA6 2 VAL A 914 SER A 915 -1 O SER A 915 N ARG A 831 SHEET 1 AA7 3 VAL A 919 GLN A 921 0 SHEET 2 AA7 3 CYS A1152 THR A1155 -1 O THR A1155 N VAL A 919 SHEET 3 AA7 3 VAL A1147 VAL A1149 -1 N VAL A1149 O CYS A1152 SHEET 1 AA8 2 GLU A1069 VAL A1071 0 SHEET 2 AA8 2 PRO A1077 ILE A1079 -1 O VAL A1078 N TRP A1070 SHEET 1 AA9 2 LYS A1089 ILE A1091 0 SHEET 2 AA9 2 ILE A1098 TYR A1100 -1 O TYR A1100 N LYS A1089 SHEET 1 AB1 2 LYS B 72 TYR B 74 0 SHEET 2 AB1 2 ASP B 272 TYR B 274 -1 O TYR B 274 N LYS B 72 SHEET 1 AB2 7 VAL B 146 HIS B 148 0 SHEET 2 AB2 7 VAL B 120 GLU B 124 1 N ALA B 122 O ILE B 147 SHEET 3 AB2 7 LEU B 99 CYS B 102 1 N GLU B 101 O LEU B 123 SHEET 4 AB2 7 LYS B 190 MET B 194 1 O LYS B 190 N LEU B 100 SHEET 5 AB2 7 GLU B 224 ILE B 229 1 O ASN B 226 N VAL B 191 SHEET 6 AB2 7 TYR B 297 MET B 301 -1 O ILE B 299 N MET B 227 SHEET 7 AB2 7 LYS B 261 VAL B 262 -1 N LYS B 261 O GLN B 300 LINK O3' GTP R 1 P G R 2 1555 1555 1.61 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 8479 SER A1230 TER 11052 ARG B 396 TER 12415 LEU C 231 HETATM12416 PG GTP R 1 77.032 79.115 55.352 1.00 97.74 P HETATM12417 O1G GTP R 1 77.553 79.143 56.767 1.00 88.24 O HETATM12418 O2G GTP R 1 78.128 78.909 54.338 1.00 87.45 O HETATM12419 O3G GTP R 1 76.160 80.301 55.025 1.00 83.20 O HETATM12420 O3B GTP R 1 76.074 77.815 55.251 1.00 92.65 O HETATM12421 PB GTP R 1 74.816 77.257 56.073 1.00 90.84 P HETATM12422 O1B GTP R 1 74.478 75.897 55.561 1.00 86.93 O HETATM12423 O2B GTP R 1 75.069 77.449 57.531 1.00 85.71 O HETATM12424 O3A GTP R 1 73.644 78.250 55.627 1.00 84.92 O HETATM12425 PA GTP R 1 72.057 78.032 55.602 1.00 85.42 P HETATM12426 O1A GTP R 1 71.682 77.172 56.761 1.00 81.17 O HETATM12427 O2A GTP R 1 71.652 77.608 54.229 1.00 83.63 O HETATM12428 O5' GTP R 1 71.539 79.521 55.872 1.00 77.22 O HETATM12429 C5' GTP R 1 72.056 80.575 55.032 1.00 73.14 C HETATM12430 C4' GTP R 1 71.841 81.900 55.717 1.00 68.36 C HETATM12431 O4' GTP R 1 71.932 81.714 57.152 1.00 68.42 O HETATM12432 C3' GTP R 1 72.861 82.994 55.387 1.00 64.96 C HETATM12433 O3' GTP R 1 72.426 83.770 54.278 1.00 62.18 O HETATM12434 C2' GTP R 1 72.877 83.813 56.679 1.00 62.52 C HETATM12435 O2' GTP R 1 71.769 84.682 56.744 1.00 59.77 O HETATM12436 C1' GTP R 1 72.729 82.720 57.733 1.00 64.35 C HETATM12437 N9 GTP R 1 73.975 82.110 58.185 1.00 63.63 N HETATM12438 C8 GTP R 1 74.207 80.764 58.295 1.00 67.35 C HETATM12439 N7 GTP R 1 75.402 80.476 58.744 1.00 65.43 N HETATM12440 C5 GTP R 1 75.986 81.713 58.973 1.00 61.82 C HETATM12441 C6 GTP R 1 77.272 82.027 59.473 1.00 60.43 C HETATM12442 O6 GTP R 1 78.168 81.248 59.823 1.00 62.06 O HETATM12443 N1 GTP R 1 77.464 83.404 59.556 1.00 58.59 N HETATM12444 C2 GTP R 1 76.542 84.354 59.199 1.00 58.47 C HETATM12445 N2 GTP R 1 76.912 85.632 59.348 1.00 57.79 N HETATM12446 N3 GTP R 1 75.331 84.064 58.726 1.00 59.74 N HETATM12447 C4 GTP R 1 75.118 82.729 58.639 1.00 61.05 C TER 12493 A R 3 TER 13534 DT N 50 TER 14526 DA T 49 CONECT1241612417124181241912420 CONECT1241712416 CONECT1241812416 CONECT1241912416 CONECT124201241612421 CONECT1242112420124221242312424 CONECT1242212421 CONECT1242312421 CONECT124241242112425 CONECT1242512424124261242712428 CONECT1242612425 CONECT1242712425 CONECT124281242512429 CONECT124291242812430 CONECT12430124291243112432 CONECT124311243012436 CONECT12432124301243312434 CONECT124331243212448 CONECT12434124321243512436 CONECT1243512434 CONECT12436124311243412437 CONECT12437124361243812447 CONECT124381243712439 CONECT124391243812440 CONECT12440124391244112447 CONECT12441124401244212443 CONECT1244212441 CONECT124431244112444 CONECT12444124431244512446 CONECT1244512444 CONECT124461244412447 CONECT12447124371244012446 CONECT1244812433 MASTER 465 0 1 73 29 0 0 614499 6 33 147 END