HEADER TRANSFERASE 26-JUN-25 9RQM TITLE GT-C O-MANNOSYLTRANSFERASE TMEM260 CO-PURIFIED WITH NATURAL DONOR AND TITLE 2 IN COMPLEX WITH ACCEPTOR PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN O-MANNOSYL-TRANSFERASE TMEM260; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TRANSMEMBRANE PROTEIN 260; COMPND 5 EC: 2.4.1.109; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: TMEM260; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PLEXIN-B2; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: MM1; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: SYNTHETIC PEPTIDE N-TERMINAL DANSYLATED WITH GSGA COMPND 14 LINKER AND SEQUENCE PVITRIQPETGPLGGGIRITI FROM PLXNB2 IPT1 DOMAIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TMEM260, C14ORF101; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: EXPI293F; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS GLYCOSYLTRANSFERASE, ER INTEGRAL MEMBRANE PROTEIN, TRANSFERASE EXPDTA ELECTRON MICROSCOPY AUTHOR J.O.CIFUENTE,I.UBARRETXENA-BELANDIA REVDAT 1 08-JUL-26 9RQM 0 JRNL AUTH J.O.CIFUENTE,L.POVOLO,A.HALIM,I.UBARRETXENA-BELANDIA JRNL TITL STRUCTURE OF O-MANNOSYLTRANSFERASE TMEM260 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.O.CIFUENTE,L.POVOLO,A.HALIM,I.UBARRETXENA-BELANDIA REMARK 1 TITL REAL-SPACE REFINEMENT IN PHENIX FOR CRYO-EM AND REMARK 1 TITL 2 CRYSTALLOGRAPHY REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. 3.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, EPU, CRYOSPARC, UCSF REMARK 3 CHIMERA, PHENIX, COOT, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC, CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.060 REMARK 3 NUMBER OF PARTICLES : 271859 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9RQM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JUL-25. REMARK 100 THE DEPOSITION ID IS D_1292147073. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : PROTEIN-SPECIFIC O-MANNOSYL REMARK 245 -TRANSFERASE (TMEM260) REMARK 245 INCUBATED WITH SYNTHETIC REMARK 245 PEPTIDE DERIVED FROM PLXNB2 REMARK 245 IPT1 DOMAIN REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.20 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 21886 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4980.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 105000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 PRO A 3 REMARK 465 HIS A 4 REMARK 465 GLY A 5 REMARK 465 ASP A 6 REMARK 465 GLY A 7 REMARK 465 ARG A 8 REMARK 465 GLY A 9 REMARK 465 GLN A 10 REMARK 465 ALA A 11 REMARK 465 GLN A 12 REMARK 465 GLY A 13 REMARK 465 ARG A 14 REMARK 465 ALA A 15 REMARK 465 VAL A 16 REMARK 465 ARG A 17 REMARK 465 VAL A 18 REMARK 465 GLY A 19 REMARK 465 LEU A 20 REMARK 465 VAL A 707 REMARK 465 ASP A 708 REMARK 465 TYR A 709 REMARK 465 LYS A 710 REMARK 465 ASP A 711 REMARK 465 HIS A 712 REMARK 465 ASP A 713 REMARK 465 GLY A 714 REMARK 465 ASP A 715 REMARK 465 TYR A 716 REMARK 465 LYS A 717 REMARK 465 ASP A 718 REMARK 465 HIS A 719 REMARK 465 ASP A 720 REMARK 465 ILE A 721 REMARK 465 ASP A 722 REMARK 465 TYR A 723 REMARK 465 LYS A 724 REMARK 465 ASP A 725 REMARK 465 ASP A 726 REMARK 465 ASP A 727 REMARK 465 ASP A 728 REMARK 465 LYS A 729 REMARK 465 GLY B 1 REMARK 465 SER B 2 REMARK 465 GLY B 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 21 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 22 CG CD NE CZ NH1 NH2 REMARK 470 SER A 23 OG REMARK 470 ILE A 26 CG1 CG2 CD1 REMARK 470 LEU A 216 CG CD1 CD2 REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 SER A 275 OG REMARK 470 GLU A 276 CG CD OE1 OE2 REMARK 470 ILE A 277 CG1 CG2 CD1 REMARK 470 GLU A 283 CG CD OE1 OE2 REMARK 470 CYS A 306 SG REMARK 470 CYS A 310 SG REMARK 470 LEU A 311 CG CD1 CD2 REMARK 470 THR A 313 OG1 CG2 REMARK 470 LYS A 314 CG CD CE NZ REMARK 470 ASP A 315 CG OD1 OD2 REMARK 470 ARG A 316 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 317 CG CD OE1 NE2 REMARK 470 ASN A 318 CG OD1 ND2 REMARK 470 SER A 320 OG REMARK 470 GLU A 378 CG CD OE1 OE2 REMARK 470 ARG A 381 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 384 CG OD1 ND2 REMARK 470 ASN A 386 CG OD1 ND2 REMARK 470 LEU A 388 CG CD1 CD2 REMARK 470 GLN A 389 CG CD OE1 NE2 REMARK 470 ILE A 497 CG1 CG2 CD1 REMARK 470 SER A 500 OG REMARK 470 VAL A 503 CG1 CG2 REMARK 470 THR A 606 OG1 CG2 REMARK 470 LYS A 612 CG CD CE NZ REMARK 470 ARG A 656 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 657 CG OD1 OD2 REMARK 470 GLU A 661 CG CD OE1 OE2 REMARK 470 ASN A 680 CG OD1 ND2 REMARK 470 ARG A 704 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 9 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 22 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 25 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 189 -60.74 -104.09 REMARK 500 CYS A 310 -125.19 62.79 REMARK 500 ALA A 312 -144.79 52.68 REMARK 500 GLN A 413 53.53 -91.70 REMARK 500 PRO A 487 41.31 -80.28 REMARK 500 PRO A 499 156.04 -47.19 REMARK 500 ASN A 514 53.58 -96.78 REMARK 500 ILE A 523 75.18 63.24 REMARK 500 TRP A 541 48.09 -140.93 REMARK 500 TRP A 569 67.28 35.91 REMARK 500 ASN A 680 59.03 -90.85 REMARK 500 VAL B 6 -47.21 65.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 IZY A 801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-54179 RELATED DB: EMDB REMARK 900 GT-C O-MANNOSYLTRANSFERASE TMEM260 CO-PURIFIED WITH NATURAL DONOR DBREF 9RQM A 1 707 UNP Q9NX78 TM260_HUMAN 1 707 DBREF 9RQM B 5 25 UNP O15031 PLXB2_HUMAN 803 823 SEQADV 9RQM ASP A 708 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM TYR A 709 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM LYS A 710 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM ASP A 711 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM HIS A 712 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM ASP A 713 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM GLY A 714 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM ASP A 715 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM TYR A 716 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM LYS A 717 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM ASP A 718 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM HIS A 719 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM ASP A 720 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM ILE A 721 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM ASP A 722 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM TYR A 723 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM LYS A 724 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM ASP A 725 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM ASP A 726 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM ASP A 727 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM ASP A 728 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM LYS A 729 UNP Q9NX78 EXPRESSION TAG SEQADV 9RQM GLY B 1 UNP O15031 EXPRESSION TAG SEQADV 9RQM SER B 2 UNP O15031 EXPRESSION TAG SEQADV 9RQM GLY B 3 UNP O15031 EXPRESSION TAG SEQADV 9RQM ALA B 4 UNP O15031 EXPRESSION TAG SEQRES 1 A 729 MET SER PRO HIS GLY ASP GLY ARG GLY GLN ALA GLN GLY SEQRES 2 A 729 ARG ALA VAL ARG VAL GLY LEU ARG ARG SER GLY GLY ILE SEQRES 3 A 729 ARG GLY GLY VAL ALA VAL PHE ALA ALA VAL ALA ALA VAL SEQRES 4 A 729 PHE THR PHE THR LEU PRO PRO SER VAL PRO GLY GLY ASP SEQRES 5 A 729 SER GLY GLU LEU ILE THR ALA ALA HIS GLU LEU GLY VAL SEQRES 6 A 729 ALA HIS PRO PRO GLY TYR PRO LEU PHE THR LEU VAL ALA SEQRES 7 A 729 LYS LEU ALA ILE THR LEU PHE PRO PHE GLY SER ILE ALA SEQRES 8 A 729 TYR ARG VAL ASN LEU LEU CYS GLY LEU PHE GLY ALA VAL SEQRES 9 A 729 ALA ALA SER LEU LEU PHE PHE THR VAL PHE ARG LEU SER SEQRES 10 A 729 GLY SER SER ALA GLY GLY ILE LEU ALA ALA GLY VAL PHE SEQRES 11 A 729 SER PHE SER ARG LEU THR TRP GLN TRP SER ILE ALA ALA SEQRES 12 A 729 GLU VAL PHE SER LEU ASN ASN LEU PHE VAL GLY LEU LEU SEQRES 13 A 729 MET ALA LEU THR VAL HIS PHE GLU GLU ALA ALA THR ALA SEQRES 14 A 729 LYS GLU ARG SER LYS VAL ALA LYS ILE GLY ALA PHE CYS SEQRES 15 A 729 CYS GLY LEU SER LEU CYS ASN GLN HIS THR ILE ILE LEU SEQRES 16 A 729 TYR VAL LEU CYS ILE ILE PRO TRP ILE LEU PHE GLN LEU SEQRES 17 A 729 LEU LYS LYS LYS GLU LEU SER LEU GLY SER LEU LEU LYS SEQRES 18 A 729 LEU SER LEU TYR PHE SER ALA GLY LEU LEU PRO TYR VAL SEQRES 19 A 729 HIS LEU PRO ILE SER SER TYR LEU ASN HIS ALA ARG TRP SEQRES 20 A 729 THR TRP GLY ASP GLN THR THR LEU GLN GLY PHE LEU THR SEQRES 21 A 729 HIS PHE LEU ARG GLU GLU TYR GLY THR PHE SER LEU ALA SEQRES 22 A 729 LYS SER GLU ILE GLY SER SER MET SER GLU ILE LEU LEU SEQRES 23 A 729 SER GLN VAL THR ASN MET ARG THR GLU LEU SER PHE ASN SEQRES 24 A 729 ILE GLN ALA LEU ALA VAL CYS ALA ASN ILE CYS LEU ALA SEQRES 25 A 729 THR LYS ASP ARG GLN ASN PRO SER LEU VAL TRP LEU PHE SEQRES 26 A 729 THR GLY MET PHE CYS ILE TYR SER LEU PHE PHE ALA TRP SEQRES 27 A 729 ARG ALA ASN LEU ASP ILE SER LYS PRO LEU PHE MET GLY SEQRES 28 A 729 VAL VAL GLU ARG PHE TRP MET GLN SER ASN ALA VAL VAL SEQRES 29 A 729 ALA VAL LEU ALA GLY ILE GLY LEU ALA ALA VAL VAL SER SEQRES 30 A 729 GLU THR ASN ARG VAL LEU ASN SER ASN GLY LEU GLN CYS SEQRES 31 A 729 LEU GLU TRP LEU SER ALA THR LEU PHE VAL VAL TYR GLN SEQRES 32 A 729 ILE TYR SER ASN TYR SER VAL CYS ASP GLN ARG THR ASN SEQRES 33 A 729 TYR VAL ILE ASP LYS PHE ALA LYS ASN LEU LEU THR SER SEQRES 34 A 729 MET PRO HIS ASP ALA ILE ILE LEU LEU ARG GLY ASP LEU SEQRES 35 A 729 PRO GLY ASN SER LEU ARG TYR MET HIS TYR CYS GLU GLY SEQRES 36 A 729 LEU ARG PRO ASP ILE SER LEU VAL ASP GLN GLU MET MET SEQRES 37 A 729 THR TYR GLU TRP TYR LEU PRO LYS MET ALA LYS HIS LEU SEQRES 38 A 729 PRO GLY VAL ASN PHE PRO GLY ASN ARG TRP ASN PRO VAL SEQRES 39 A 729 GLU GLY ILE LEU PRO SER GLY MET VAL THR PHE ASN LEU SEQRES 40 A 729 TYR HIS PHE LEU GLU VAL ASN LYS GLN LYS GLU THR PHE SEQRES 41 A 729 VAL CYS ILE GLY ILE HIS GLU GLY ASP PRO THR TRP LYS SEQRES 42 A 729 LYS ASN TYR SER LEU TRP PRO TRP GLY SER CYS ASP LYS SEQRES 43 A 729 LEU VAL PRO LEU GLU ILE VAL PHE ASN PRO GLU GLU TRP SEQRES 44 A 729 ILE LYS LEU THR LYS SER ILE TYR ASN TRP THR GLU GLU SEQRES 45 A 729 TYR GLY ARG PHE ASP PRO SER SER TRP GLU SER VAL ALA SEQRES 46 A 729 ASN GLU GLU MET TRP GLN ALA ARG MET LYS THR PRO PHE SEQRES 47 A 729 PHE ILE PHE ASN LEU ALA GLU THR ALA HIS MET PRO SER SEQRES 48 A 729 LYS VAL LYS ALA GLN LEU TYR ALA GLN ALA TYR ASP LEU SEQRES 49 A 729 TYR LYS GLU ILE VAL TYR LEU GLN LYS GLU HIS PRO VAL SEQRES 50 A 729 ASN TRP HIS LYS ASN TYR ALA ILE ALA CYS GLU ARG MET SEQRES 51 A 729 LEU ARG LEU GLN ALA ARG ASP ALA ASP PRO GLU VAL LEU SEQRES 52 A 729 LEU SER GLU THR ILE ARG HIS PHE ARG LEU TYR SER GLN SEQRES 53 A 729 LYS ALA PRO ASN ASP PRO GLN GLN ALA ASP ILE LEU GLY SEQRES 54 A 729 ALA LEU LYS HIS LEU ARG LYS GLU LEU GLN SER LEU ARG SEQRES 55 A 729 ASN ARG LYS ASN VAL ASP TYR LYS ASP HIS ASP GLY ASP SEQRES 56 A 729 TYR LYS ASP HIS ASP ILE ASP TYR LYS ASP ASP ASP ASP SEQRES 57 A 729 LYS SEQRES 1 B 25 GLY SER GLY ALA PRO VAL ILE THR ARG ILE GLN PRO GLU SEQRES 2 B 25 THR GLY PRO LEU GLY GLY GLY ILE ARG ILE THR ILE HET IZY A 801 31 HET NAG A 802 14 HETNAM IZY DOLICHOL MONOPHOSPHATE BETA-D-MANNOSE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN IZY [(2~{S},3~{S},4~{S},5~{S},6~{R})-6-(HYDROXYMETHYL)-3,4, HETSYN 2 IZY 5-TRIS(OXIDANYL)OXAN-2-YL] [(3~{S},6~{Z},10~{E}, HETSYN 3 IZY 14~{E})-3,7,11,15,19-PENTAMETHYLICOSA-6,10,14,18- HETSYN 4 IZY TETRAENYL] HYDROGEN PHOSPHATE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 IZY C31 H55 O9 P FORMUL 4 NAG C8 H15 N O6 HELIX 1 AA1 ARG A 27 PHE A 42 1 16 HELIX 2 AA2 GLU A 55 LEU A 63 1 9 HELIX 3 AA3 TYR A 71 PHE A 85 1 15 HELIX 4 AA4 SER A 89 GLY A 118 1 30 HELIX 5 AA5 SER A 119 PHE A 132 1 14 HELIX 6 AA6 SER A 133 ALA A 142 1 10 HELIX 7 AA7 VAL A 145 GLU A 165 1 21 HELIX 8 AA8 THR A 168 LEU A 187 1 20 HELIX 9 AA9 CYS A 188 ASN A 189 5 2 HELIX 10 AB1 GLN A 190 THR A 192 5 3 HELIX 11 AB2 ILE A 193 LYS A 212 1 20 HELIX 12 AB3 SER A 215 GLY A 229 1 15 HELIX 13 AB4 LEU A 230 TYR A 233 5 4 HELIX 14 AB5 VAL A 234 ASN A 243 1 10 HELIX 15 AB6 THR A 254 LEU A 263 1 10 HELIX 16 AB7 SER A 280 LEU A 296 1 17 HELIX 17 AB8 SER A 297 CYS A 310 1 14 HELIX 18 AB9 PRO A 319 ALA A 340 1 22 HELIX 19 AC1 LYS A 346 GLU A 354 1 9 HELIX 20 AC2 TRP A 357 ASN A 384 1 28 HELIX 21 AC3 LEU A 388 ASP A 412 1 25 HELIX 22 AC4 TYR A 417 SER A 429 1 13 HELIX 23 AC5 GLY A 440 CYS A 453 1 14 HELIX 24 AC6 GLN A 465 THR A 469 1 5 HELIX 25 AC7 TRP A 472 ALA A 478 1 7 HELIX 26 AC8 ASN A 506 ASN A 514 1 9 HELIX 27 AC9 PRO A 530 LYS A 534 5 5 HELIX 28 AD1 ASN A 555 THR A 563 1 9 HELIX 29 AD2 SER A 580 ALA A 592 1 13 HELIX 30 AD3 MET A 594 THR A 606 1 13 HELIX 31 AD4 PRO A 610 GLN A 632 1 23 HELIX 32 AD5 VAL A 637 GLN A 654 1 18 HELIX 33 AD6 PRO A 660 ALA A 678 1 19 HELIX 34 AD7 GLN A 683 LYS A 705 1 23 HELIX 35 AD8 ILE B 7 GLN B 11 5 5 HELIX 36 AD9 LEU B 17 ILE B 21 5 5 SHEET 1 AA1 5 SER A 461 ASP A 464 0 SHEET 2 AA1 5 ALA A 434 LEU A 438 1 N ILE A 436 O SER A 461 SHEET 3 AA1 5 GLU A 518 CYS A 522 1 O PHE A 520 N ILE A 435 SHEET 4 AA1 5 CYS A 544 PRO A 549 -1 O ASP A 545 N VAL A 521 SHEET 5 AA1 5 TYR A 536 TRP A 541 -1 N SER A 537 O VAL A 548 SHEET 1 AA2 2 ARG A 490 TRP A 491 0 SHEET 2 AA2 2 THR A 504 PHE A 505 1 O PHE A 505 N ARG A 490 SSBOND 1 CYS A 522 CYS A 544 1555 1555 2.04 LINK ND2 ASN A 568 C1 NAG A 802 1555 1555 1.43 CISPEP 1 PRO A 68 PRO A 69 0 4.80 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 3826 4008 CONECT 4008 3826 CONECT 4212 5521 CONECT 5490 5498 CONECT 5491 5499 5500 CONECT 5492 5500 5501 5502 CONECT 5493 5494 5502 CONECT 5494 5493 5495 CONECT 5495 5494 5496 5503 CONECT 5496 5495 5504 CONECT 5497 5498 CONECT 5498 5490 5497 5499 CONECT 5499 5491 5498 CONECT 5500 5491 5492 CONECT 5501 5492 CONECT 5502 5492 5493 CONECT 5503 5495 CONECT 5504 5496 5511 CONECT 5505 5510 5514 5515 CONECT 5506 5507 5508 5515 CONECT 5507 5506 5516 CONECT 5508 5506 5509 5517 CONECT 5509 5508 5510 5518 CONECT 5510 5505 5509 5519 CONECT 5511 5504 5520 CONECT 5512 5520 CONECT 5513 5520 CONECT 5514 5505 5520 CONECT 5515 5505 5506 CONECT 5516 5507 CONECT 5517 5508 CONECT 5518 5509 CONECT 5519 5510 CONECT 5520 5511 5512 5513 5514 CONECT 5521 4212 5522 5532 CONECT 5522 5521 5523 5529 CONECT 5523 5522 5524 5530 CONECT 5524 5523 5525 5531 CONECT 5525 5524 5526 5532 CONECT 5526 5525 5533 CONECT 5527 5528 5529 5534 CONECT 5528 5527 CONECT 5529 5522 5527 CONECT 5530 5523 CONECT 5531 5524 CONECT 5532 5521 5525 CONECT 5533 5526 CONECT 5534 5527 MASTER 247 0 2 36 7 0 0 6 5532 2 48 59 END