HEADER CYTOSOLIC PROTEIN 30-JUN-25 9RS6 TITLE STRUCTURE OF THE YPT7 GEF COMPLEX MON1-CCZ1 FROM CHAETOMIUM TITLE 2 THERMOPHILUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: VACUOLAR FUSION PROTEIN MON1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CCZ1/INTU/HSP4 FIRST LONGIN DOMAIN-CONTAINING PROTEIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCHAETOIDES THERMOPHILA; SOURCE 3 ORGANISM_TAXID: 209285; SOURCE 4 GENE: CTHT_0067370; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: THERMOCHAETOIDES THERMOPHILA; SOURCE 9 ORGANISM_TAXID: 209285; SOURCE 10 GENE: CTHT_0050970; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LONGIN DOMAIN, GEF, NUCLEOTIDE EXCHANGE, ENDOSOME, AUTOPHAGOSOME, KEYWDS 2 CYTOSOLIC PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR S.WILMES,J.SCHAEFER,A.MOELLER,D.KUEMMEL REVDAT 2 03-SEP-25 9RS6 1 JRNL REVDAT 1 30-JUL-25 9RS6 0 JRNL AUTH S.WILMES,J.TONJES,M.DRECHSLER,A.RUF,J.H.SCHAFER,A.LURICK, JRNL AUTH 2 D.JANULIENE,S.APELT,D.DI IORIO,S.V.WEGNER,M.LOOSE,A.MOELLER, JRNL AUTH 3 A.PAULULAT,D.KUMMEL JRNL TITL MECHANISTIC ADAPTATION OF THE METAZOAN RABGEFS MON1-CCZ1 AND JRNL TITL 2 FUZZY-INTURNED. JRNL REF SCI ADV V. 11 X2893 2025 JRNL REFN ESSN 2375-2548 JRNL PMID 40864718 JRNL DOI 10.1126/SCIADV.ADX2893 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, PHENIX, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.000 REMARK 3 NUMBER OF PARTICLES : 127117 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9RS6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JUN-25. REMARK 100 THE DEPOSITION ID IS D_1292148922. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COMPLEX OF THE RAB7 GEF MON1 REMARK 245 -CCZ1 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.80 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.30 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS GLACIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : SPOT SCAN REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLN A 3 REMARK 465 ASN A 4 REMARK 465 ASN A 5 REMARK 465 ALA A 6 REMARK 465 PRO A 7 REMARK 465 GLU A 8 REMARK 465 SER A 9 REMARK 465 VAL A 10 REMARK 465 ALA A 11 REMARK 465 ALA A 12 REMARK 465 GLU A 13 REMARK 465 GLY A 14 REMARK 465 THR A 15 REMARK 465 VAL A 16 REMARK 465 ALA A 17 REMARK 465 GLY A 18 REMARK 465 GLN A 19 REMARK 465 GLN A 20 REMARK 465 THR A 21 REMARK 465 ASP A 22 REMARK 465 THR A 23 REMARK 465 THR A 24 REMARK 465 LYS A 25 REMARK 465 PRO A 26 REMARK 465 GLU A 27 REMARK 465 PRO A 28 REMARK 465 SER A 29 REMARK 465 SER A 30 REMARK 465 GLN A 31 REMARK 465 PRO A 32 REMARK 465 ALA A 33 REMARK 465 PRO A 34 REMARK 465 GLU A 35 REMARK 465 PRO A 36 REMARK 465 PRO A 37 REMARK 465 SER A 38 REMARK 465 GLN A 39 REMARK 465 VAL A 40 REMARK 465 THR A 41 REMARK 465 THR A 42 REMARK 465 ASP A 43 REMARK 465 PHE A 44 REMARK 465 PRO A 45 REMARK 465 PRO A 46 REMARK 465 ASN A 47 REMARK 465 ASN A 48 REMARK 465 LYS A 49 REMARK 465 PRO A 50 REMARK 465 ASN A 51 REMARK 465 ASP A 52 REMARK 465 VAL A 53 REMARK 465 PRO A 54 REMARK 465 ALA A 55 REMARK 465 THR A 56 REMARK 465 GLU A 57 REMARK 465 PRO A 58 REMARK 465 ALA A 59 REMARK 465 SER A 60 REMARK 465 SER A 61 REMARK 465 SER A 62 REMARK 465 PRO A 63 REMARK 465 ARG A 64 REMARK 465 PRO A 65 REMARK 465 THR A 66 REMARK 465 GLU A 67 REMARK 465 PRO A 68 REMARK 465 PRO A 69 REMARK 465 ALA A 70 REMARK 465 PRO A 71 REMARK 465 PRO A 72 REMARK 465 PRO A 73 REMARK 465 PRO A 74 REMARK 465 LYS A 75 REMARK 465 PRO A 76 REMARK 465 THR A 77 REMARK 465 ILE A 78 REMARK 465 ALA A 79 REMARK 465 LEU A 80 REMARK 465 SER A 81 REMARK 465 PRO A 82 REMARK 465 LEU A 83 REMARK 465 ASP A 84 REMARK 465 ILE A 85 REMARK 465 ALA A 86 REMARK 465 THR A 87 REMARK 465 LEU A 88 REMARK 465 THR A 89 REMARK 465 PHE A 90 REMARK 465 PRO A 91 REMARK 465 ASP A 92 REMARK 465 GLY A 93 REMARK 465 THR A 94 REMARK 465 ARG A 95 REMARK 465 GLY A 96 REMARK 465 THR A 97 REMARK 465 PHE A 98 REMARK 465 PRO A 99 REMARK 465 ALA A 100 REMARK 465 PRO A 101 REMARK 465 PRO A 102 REMARK 465 GLN A 103 REMARK 465 THR A 104 REMARK 465 SER A 105 REMARK 465 ALA A 106 REMARK 465 GLN A 107 REMARK 465 SER A 108 REMARK 465 VAL A 109 REMARK 465 SER A 110 REMARK 465 THR A 111 REMARK 465 PRO A 112 REMARK 465 SER A 113 REMARK 465 ILE A 114 REMARK 465 ALA A 115 REMARK 465 SER A 116 REMARK 465 GLY A 117 REMARK 465 HIS A 118 REMARK 465 VAL A 119 REMARK 465 THR A 120 REMARK 465 PRO A 121 REMARK 465 GLN A 122 REMARK 465 ARG A 123 REMARK 465 ASP A 124 REMARK 465 THR A 125 REMARK 465 ASP A 126 REMARK 465 THR A 127 REMARK 465 ALA A 128 REMARK 465 SER A 129 REMARK 465 ILE A 130 REMARK 465 THR A 131 REMARK 465 SER A 132 REMARK 465 VAL A 133 REMARK 465 ALA A 134 REMARK 465 GLY A 135 REMARK 465 THR A 136 REMARK 465 LEU A 137 REMARK 465 ARG A 138 REMARK 465 GLY A 139 REMARK 465 VAL A 140 REMARK 465 THR A 141 REMARK 465 GLY A 142 REMARK 465 THR A 143 REMARK 465 ALA A 144 REMARK 465 GLY A 145 REMARK 465 ASP A 146 REMARK 465 LEU A 147 REMARK 465 ALA A 148 REMARK 465 SER A 149 REMARK 465 LEU A 150 REMARK 465 LEU A 151 REMARK 465 ALA A 152 REMARK 465 GLY A 153 REMARK 465 ASP A 154 REMARK 465 GLY A 155 REMARK 465 LEU A 156 REMARK 465 GLY A 157 REMARK 465 ARG A 158 REMARK 465 LYS A 159 REMARK 465 SER A 160 REMARK 465 LYS A 161 REMARK 465 ALA A 162 REMARK 465 TRP A 163 REMARK 465 ARG A 164 REMARK 465 VAL A 165 REMARK 465 LEU A 166 REMARK 465 ARG A 167 REMARK 465 ALA A 168 REMARK 465 GLN A 169 REMARK 465 GLN A 170 REMARK 465 GLN A 171 REMARK 465 ALA A 172 REMARK 465 CYS A 173 REMARK 465 GLY A 174 REMARK 465 GLU A 175 REMARK 465 GLY A 176 REMARK 465 SER A 177 REMARK 465 GLY A 178 REMARK 465 GLU A 179 REMARK 465 GLU A 180 REMARK 465 GLY A 181 REMARK 465 GLU A 182 REMARK 465 ILE A 183 REMARK 465 THR A 184 REMARK 465 GLU A 185 REMARK 465 ILE A 186 REMARK 465 GLU A 187 REMARK 465 GLY A 188 REMARK 465 ALA A 324 REMARK 465 HIS A 325 REMARK 465 ARG A 326 REMARK 465 PRO A 327 REMARK 465 SER A 328 REMARK 465 THR A 329 REMARK 465 ASP A 330 REMARK 465 LEU A 331 REMARK 465 ARG A 332 REMARK 465 LYS A 458 REMARK 465 ALA A 459 REMARK 465 PRO A 460 REMARK 465 ASP A 461 REMARK 465 ASP A 462 REMARK 465 GLN A 463 REMARK 465 ASN A 464 REMARK 465 GLN A 465 REMARK 465 PRO A 466 REMARK 465 PRO A 467 REMARK 465 GLU A 468 REMARK 465 SER A 469 REMARK 465 SER A 470 REMARK 465 ASN A 471 REMARK 465 LEU A 472 REMARK 465 ASP A 473 REMARK 465 ALA A 474 REMARK 465 SER A 475 REMARK 465 ASN A 476 REMARK 465 LYS A 477 REMARK 465 ASN A 478 REMARK 465 SER A 479 REMARK 465 SER A 480 REMARK 465 ASN A 481 REMARK 465 THR A 482 REMARK 465 PRO A 483 REMARK 465 ASP A 484 REMARK 465 ASP A 485 REMARK 465 GLU A 610 REMARK 465 GLY A 611 REMARK 465 PHE A 665 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 THR B 3 REMARK 465 PRO B 4 REMARK 465 VAL B 5 REMARK 465 SER B 6 REMARK 465 PRO B 7 REMARK 465 SER B 8 REMARK 465 PRO B 9 REMARK 465 SER B 10 REMARK 465 ARG B 55 REMARK 465 ARG B 56 REMARK 465 PRO B 57 REMARK 465 ARG B 58 REMARK 465 ARG B 59 REMARK 465 ARG B 60 REMARK 465 ASP B 61 REMARK 465 ARG B 62 REMARK 465 GLN B 63 REMARK 465 ARG B 64 REMARK 465 ALA B 65 REMARK 465 GLN B 66 REMARK 465 SER B 67 REMARK 465 VAL B 68 REMARK 465 VAL B 69 REMARK 465 LYS B 70 REMARK 465 ASP B 71 REMARK 465 SER B 72 REMARK 465 ARG B 73 REMARK 465 PRO B 74 REMARK 465 ASN B 75 REMARK 465 ALA B 76 REMARK 465 ALA B 77 REMARK 465 GLY B 78 REMARK 465 ALA B 79 REMARK 465 THR B 80 REMARK 465 GLY B 81 REMARK 465 ASP B 82 REMARK 465 SER B 83 REMARK 465 GLU B 84 REMARK 465 ALA B 85 REMARK 465 VAL B 86 REMARK 465 ALA B 87 REMARK 465 GLU B 88 REMARK 465 ASP B 89 REMARK 465 LYS B 90 REMARK 465 ASP B 91 REMARK 465 PRO B 92 REMARK 465 VAL B 93 REMARK 465 LEU B 156 REMARK 465 PRO B 157 REMARK 465 GLN B 158 REMARK 465 ILE B 159 REMARK 465 LYS B 160 REMARK 465 THR B 161 REMARK 465 PRO B 162 REMARK 465 THR B 163 REMARK 465 SER B 164 REMARK 465 SER B 165 REMARK 465 SER B 166 REMARK 465 ALA B 167 REMARK 465 PRO B 168 REMARK 465 PRO B 169 REMARK 465 PRO B 170 REMARK 465 ALA B 171 REMARK 465 PRO B 172 REMARK 465 ASN B 173 REMARK 465 LEU B 174 REMARK 465 ASN B 175 REMARK 465 PRO B 176 REMARK 465 LEU B 177 REMARK 465 PRO B 178 REMARK 465 PRO B 179 REMARK 465 GLU B 180 REMARK 465 GLU B 477 REMARK 465 CYS B 478 REMARK 465 SER B 479 REMARK 465 GLU B 480 REMARK 465 GLU B 481 REMARK 465 GLU B 482 REMARK 465 LEU B 483 REMARK 465 THR B 484 REMARK 465 SER B 485 REMARK 465 SER B 486 REMARK 465 GLN B 487 REMARK 465 ALA B 488 REMARK 465 ASN B 489 REMARK 465 GLN B 502 REMARK 465 HIS B 503 REMARK 465 PRO B 504 REMARK 465 SER B 505 REMARK 465 ARG B 506 REMARK 465 LYS B 507 REMARK 465 ILE B 508 REMARK 465 PRO B 509 REMARK 465 PRO B 510 REMARK 465 GLU B 511 REMARK 465 ASP B 512 REMARK 465 PRO B 513 REMARK 465 GLN B 514 REMARK 465 PRO B 515 REMARK 465 LEU B 516 REMARK 465 GLY B 517 REMARK 465 LYS B 518 REMARK 465 VAL B 519 REMARK 465 GLY B 520 REMARK 465 PRO B 521 REMARK 465 GLU B 522 REMARK 465 LEU B 523 REMARK 465 PRO B 524 REMARK 465 ARG B 525 REMARK 465 ASP B 526 REMARK 465 GLU B 584 REMARK 465 ARG B 585 REMARK 465 PRO B 586 REMARK 465 VAL B 587 REMARK 465 VAL B 588 REMARK 465 GLU B 589 REMARK 465 THR B 590 REMARK 465 THR B 591 REMARK 465 SER B 592 REMARK 465 SER B 593 REMARK 465 SER B 594 REMARK 465 GLY B 595 REMARK 465 THR B 596 REMARK 465 THR B 597 REMARK 465 PHE B 625 REMARK 465 PRO B 626 REMARK 465 TYR B 627 REMARK 465 SER B 628 REMARK 465 ALA B 629 REMARK 465 THR B 630 REMARK 465 THR B 631 REMARK 465 PRO B 632 REMARK 465 THR B 633 REMARK 465 GLY B 634 REMARK 465 HIS B 635 REMARK 465 SER B 636 REMARK 465 THR B 637 REMARK 465 GLY B 638 REMARK 465 GLN B 639 REMARK 465 GLN B 640 REMARK 465 HIS B 641 REMARK 465 HIS B 642 REMARK 465 GLN B 643 REMARK 465 THR B 671 REMARK 465 ASP B 672 REMARK 465 PRO B 673 REMARK 465 SER B 674 REMARK 465 SER B 675 REMARK 465 PHE B 676 REMARK 465 THR B 677 REMARK 465 HIS B 678 REMARK 465 LEU B 679 REMARK 465 PRO B 680 REMARK 465 TRP B 681 REMARK 465 GLU B 682 REMARK 465 VAL B 702 REMARK 465 GLU B 703 REMARK 465 HIS B 704 REMARK 465 SER B 705 REMARK 465 PRO B 706 REMARK 465 PRO B 707 REMARK 465 ASP B 708 REMARK 465 ALA B 709 REMARK 465 VAL B 710 REMARK 465 SER B 711 REMARK 465 LEU B 712 REMARK 465 HIS B 713 REMARK 465 HIS B 714 REMARK 465 ALA B 715 REMARK 465 ARG B 716 REMARK 465 ASP B 717 REMARK 465 ASP B 718 REMARK 465 ASP B 719 REMARK 465 ASP B 720 REMARK 465 ASN B 721 REMARK 465 ASP B 722 REMARK 465 ASP B 723 REMARK 465 ASP B 724 REMARK 465 ALA B 725 REMARK 465 SER B 726 REMARK 465 CYS B 727 REMARK 465 SER B 728 REMARK 465 VAL B 729 REMARK 465 LEU B 730 REMARK 465 ALA B 741 REMARK 465 ALA B 742 REMARK 465 GLY B 743 REMARK 465 SER B 744 REMARK 465 THR B 745 REMARK 465 SER B 746 REMARK 465 SER B 747 REMARK 465 SER B 748 REMARK 465 SER B 749 REMARK 465 GLY B 750 REMARK 465 SER B 751 REMARK 465 GLY B 752 REMARK 465 PHE B 753 REMARK 465 GLY B 754 REMARK 465 LEU B 755 REMARK 465 GLY B 756 REMARK 465 ALA B 757 REMARK 465 ILE B 758 REMARK 465 PRO B 759 REMARK 465 GLY B 760 REMARK 465 LEU B 761 REMARK 465 GLY B 762 REMARK 465 GLY B 763 REMARK 465 LEU B 764 REMARK 465 GLY B 765 REMARK 465 GLY B 766 REMARK 465 TRP B 767 REMARK 465 ALA B 768 REMARK 465 ALA B 769 REMARK 465 ASP B 770 REMARK 465 GLY B 771 REMARK 465 ALA B 772 REMARK 465 THR B 773 REMARK 465 ARG B 774 REMARK 465 LEU B 775 REMARK 465 ALA B 776 REMARK 465 GLN B 777 REMARK 465 GLY B 778 REMARK 465 ILE B 779 REMARK 465 GLY B 780 REMARK 465 ILE B 781 REMARK 465 ASP B 782 REMARK 465 THR B 783 REMARK 465 ARG B 784 REMARK 465 ARG B 785 REMARK 465 TYR B 786 REMARK 465 VAL B 787 REMARK 465 GLU B 788 REMARK 465 GLY B 789 REMARK 465 LEU B 790 REMARK 465 LEU B 791 REMARK 465 THR B 792 REMARK 465 SER B 793 REMARK 465 LEU B 794 REMARK 465 GLY B 795 REMARK 465 ARG B 796 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR B 598 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 239 -61.89 -94.80 REMARK 500 SER A 381 40.24 -108.28 REMARK 500 VAL A 398 -61.40 -107.88 REMARK 500 ASN A 429 57.96 -91.04 REMARK 500 LEU A 439 72.55 52.52 REMARK 500 LEU A 455 54.66 -93.72 REMARK 500 LEU B 318 -9.21 72.32 REMARK 500 ALA B 335 18.42 54.81 REMARK 500 LYS B 461 70.04 51.19 REMARK 500 PRO B 570 0.14 -69.50 REMARK 500 GLN B 572 -62.05 -90.42 REMARK 500 HIS B 600 -55.05 -120.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-54211 RELATED DB: EMDB REMARK 900 YPT7 GEF MON1-CCZ1 DBREF 9RS6 A 1 665 UNP G0SGS3 G0SGS3_CHATD 1 665 DBREF 9RS6 B 1 460 UNP G0SD94 G0SD94_CHATD 1 360 DBREF 9RS6 B 461 796 UNP G0SD94 G0SD94_CHATD 461 796 SEQADV 9RS6 GLY A -4 UNP G0SGS3 EXPRESSION TAG SEQADV 9RS6 PRO A -3 UNP G0SGS3 EXPRESSION TAG SEQADV 9RS6 LEU A -2 UNP G0SGS3 EXPRESSION TAG SEQADV 9RS6 GLY A -1 UNP G0SGS3 EXPRESSION TAG SEQADV 9RS6 SER A 0 UNP G0SGS3 EXPRESSION TAG SEQADV 9RS6 SER B 0 UNP G0SD94 EXPRESSION TAG SEQRES 1 A 670 GLY PRO LEU GLY SER MET THR GLN ASN ASN ALA PRO GLU SEQRES 2 A 670 SER VAL ALA ALA GLU GLY THR VAL ALA GLY GLN GLN THR SEQRES 3 A 670 ASP THR THR LYS PRO GLU PRO SER SER GLN PRO ALA PRO SEQRES 4 A 670 GLU PRO PRO SER GLN VAL THR THR ASP PHE PRO PRO ASN SEQRES 5 A 670 ASN LYS PRO ASN ASP VAL PRO ALA THR GLU PRO ALA SER SEQRES 6 A 670 SER SER PRO ARG PRO THR GLU PRO PRO ALA PRO PRO PRO SEQRES 7 A 670 PRO LYS PRO THR ILE ALA LEU SER PRO LEU ASP ILE ALA SEQRES 8 A 670 THR LEU THR PHE PRO ASP GLY THR ARG GLY THR PHE PRO SEQRES 9 A 670 ALA PRO PRO GLN THR SER ALA GLN SER VAL SER THR PRO SEQRES 10 A 670 SER ILE ALA SER GLY HIS VAL THR PRO GLN ARG ASP THR SEQRES 11 A 670 ASP THR ALA SER ILE THR SER VAL ALA GLY THR LEU ARG SEQRES 12 A 670 GLY VAL THR GLY THR ALA GLY ASP LEU ALA SER LEU LEU SEQRES 13 A 670 ALA GLY ASP GLY LEU GLY ARG LYS SER LYS ALA TRP ARG SEQRES 14 A 670 VAL LEU ARG ALA GLN GLN GLN ALA CYS GLY GLU GLY SER SEQRES 15 A 670 GLY GLU GLU GLY GLU ILE THR GLU ILE GLU GLY LEU GLY SEQRES 16 A 670 LEU GLY GLU GLY MET GLU GLY PHE GLU ARG GLU LEU ASP SEQRES 17 A 670 ASN ILE PRO ASP THR LEU PRO ASP ASP GLU ARG LEU ALA SEQRES 18 A 670 LEU TRP LYS GLY LYS LEU LYS HIS TYR LEU ILE LEU SER SEQRES 19 A 670 SER ALA GLY LYS PRO ILE TRP SER ARG HIS GLY ASP LEU SEQRES 20 A 670 SER LEU VAL ASN SER THR MET GLY VAL VAL GLN THR ILE SEQRES 21 A 670 ILE SER PHE TYR GLU GLY ALA ARG ASN PRO LEU LEU GLY SEQRES 22 A 670 PHE THR ALA GLY LYS VAL ARG PHE VAL ILE LEU ILE LYS SEQRES 23 A 670 GLY PRO LEU TYR PHE VAL ALA ILE SER ARG LEU ARG GLU SEQRES 24 A 670 SER ASP ALA GLN LEU ARG ALA GLN LEU GLU ALA LEU TYR SEQRES 25 A 670 MET GLN ILE LEU SER THR LEU THR LEU PRO ILE LEU THR SEQRES 26 A 670 ASN ILE PHE ALA HIS ARG PRO SER THR ASP LEU ARG GLY SEQRES 27 A 670 PRO LEU GLN GLY THR GLU SER LEU LEU ALA SER LEU ALA SEQRES 28 A 670 ASP SER PHE THR LYS GLY SER PRO SER THR LEU LEU SER SEQRES 29 A 670 ALA LEU GLU CYS LEU ARG LEU ARG LYS SER GLN ARG GLN SEQRES 30 A 670 ALA ILE THR ASN ILE PHE LEU LYS SER ARG CYS GLU GLU SEQRES 31 A 670 LEU LEU TYR GLY LEU LEU VAL ALA GLY GLY LYS LEU VAL SEQRES 32 A 670 SER VAL ILE ARG PRO ARG LYS HIS SER LEU HIS PRO SER SEQRES 33 A 670 ASP LEU GLN LEU ILE PHE ASN MET LEU PHE GLU SER GLY SEQRES 34 A 670 GLY ILE LYS GLY ASN GLY GLY GLU ASN TRP ILE PRO LEU SEQRES 35 A 670 CYS LEU PRO ALA PHE ASN ASN THR GLY TYR LEU TYR MET SEQRES 36 A 670 TYR VAL SER PHE LEU ASP ASP LYS ALA PRO ASP ASP GLN SEQRES 37 A 670 ASN GLN PRO PRO GLU SER SER ASN LEU ASP ALA SER ASN SEQRES 38 A 670 LYS ASN SER SER ASN THR PRO ASP ASP ASP LEU THR ALA SEQRES 39 A 670 LEU ILE LEU ILE SER PRO SER ARG GLU ALA PHE TYR ALA SEQRES 40 A 670 LEU GLN SER MET ARG THR ARG LEU VAL SER GLN LEU LEU SEQRES 41 A 670 SER THR GLY TYR LEU SER LEU ILE ARG SER THR ALA LEU SEQRES 42 A 670 SER GLY ARG PRO SER ILE THR SER ILE LEU PRO LYS THR SEQRES 43 A 670 PRO LEU LEU HIS PHE LEU TYR LYS SER ARG PRO ASN VAL SEQRES 44 A 670 GLN TRP CYS MET SER SER LEU SER SER LEU THR PRO PRO SEQRES 45 A 670 GLY ALA THR ALA THR GLU THR LEU LEU ALA ARG ARG LYS SEQRES 46 A 670 LEU MET SER VAL TYR GLU GLU LEU HIS ALA ALA LEU HIS SEQRES 47 A 670 ALA ARG HIS ALA HIS LEU ARG VAL VAL TYR SER THR ALA SEQRES 48 A 670 ASP GLU LYS GLU GLY GLU GLY LEU ALA CYS LEU GLY TRP SEQRES 49 A 670 SER THR PRO ALA PHE GLU VAL TYR CYS VAL ALA PRO GLY SEQRES 50 A 670 CYS VAL GLY ARG ALA GLY MET ALA ARG GLU VAL ASN ARG SEQRES 51 A 670 VAL VAL GLN TRP ALA ARG ARG GLU GLU GLU ARG LEU PHE SEQRES 52 A 670 ILE LEU GLY GLY GLY VAL PHE SEQRES 1 B 697 SER MET THR THR PRO VAL SER PRO SER PRO SER GLY ILE SEQRES 2 B 697 ILE PRO ALA GLN LEU GLY PHE LEU ALA ILE TYR ASN PRO SEQRES 3 B 697 ALA LEU GLY THR THR ASP GLU THR LEU GLU ASP GLN ILE SEQRES 4 B 697 VAL TYR TYR ALA THR ALA SER THR LEU SER GLN ALA ARG SEQRES 5 B 697 ARG ARG HIS ARG ARG PRO ARG ARG ARG ASP ARG GLN ARG SEQRES 6 B 697 ALA GLN SER VAL VAL LYS ASP SER ARG PRO ASN ALA ALA SEQRES 7 B 697 GLY ALA THR GLY ASP SER GLU ALA VAL ALA GLU ASP LYS SEQRES 8 B 697 ASP PRO VAL SER LYS GLU GLU ARG HIS GLU ARG LEU ARG SEQRES 9 B 697 GLN ILE GLY LEU ALA GLN GLY MET VAL GLU PHE ALA LYS SEQRES 10 B 697 SER PHE SER ASP GLY GLU PRO VAL ASP THR ILE ASP THR SEQRES 11 B 697 GLU LYS ALA ARG VAL ILE LEU VAL GLU VAL GLU GLU GLY SEQRES 12 B 697 TRP TRP ILE LEU ALA SER ILE ASP LEU THR ARG LEU PRO SEQRES 13 B 697 LEU PRO GLN ILE LYS THR PRO THR SER SER SER ALA PRO SEQRES 14 B 697 PRO PRO ALA PRO ASN LEU ASN PRO LEU PRO PRO GLU PRO SEQRES 15 B 697 ALA TYR GLU TYR SER SER ARG GLU VAL LYS PRO PRO SER SEQRES 16 B 697 LEU LEU ARG ALA ASP LEU LEU ARG ALA TYR ASP LEU PHE SEQRES 17 B 697 LEU LEU HIS HIS GLY SER SER LEU SER SER LEU LEU ALA SEQRES 18 B 697 SER GLN GLY ARG ALA GLN LEU VAL ALA SER LEU THR ARG SEQRES 19 B 697 PHE TRP ASP HIS PHE LEU ALA THR TRP ASN VAL LEU LEU SEQRES 20 B 697 HIS GLY ASN PRO ALA CYS ASP VAL PHE GLY GLY ILE LYS SEQRES 21 B 697 LEU ALA ALA SER GLY GLU LEU GLY ILE GLY VAL GLY GLU SEQRES 22 B 697 GLU GLU ARG GLY SER GLY GLU ARG GLU VAL LEU GLU GLY SEQRES 23 B 697 LEU VAL GLU ARG VAL GLU GLY LEU VAL ASP VAL VAL VAL SEQRES 24 B 697 GLY ARG TYR GLY GLY PRO PRO SER GLU LYS GLY PRO GLU SEQRES 25 B 697 GLU GLU GLN TRP LEU GLY LEU GLY GLY GLU VAL GLY GLU SEQRES 26 B 697 GLU ASP GLY ALA VAL PHE LEU GLY VAL GLY ALA LEU ASP SEQRES 27 B 697 ARG LYS SER LEU ARG GLY VAL VAL GLN TRP MET GLU GLU SEQRES 28 B 697 VAL TYR VAL TRP GLY GLU ASN ALA PHE GLY LYS PRO ARG SEQRES 29 B 697 ARG ASP LEU SER THR GLY HIS PHE LEU LEU GLY LEU SER SEQRES 30 B 697 GLU CYS SER GLU GLU GLU LEU THR SER SER GLN ALA ASN SEQRES 31 B 697 PRO LYS ALA ILE PHE VAL GLU LEU LYS PRO SER TYR GLN SEQRES 32 B 697 HIS PRO SER ARG LYS ILE PRO PRO GLU ASP PRO GLN PRO SEQRES 33 B 697 LEU GLY LYS VAL GLY PRO GLU LEU PRO ARG ASP HIS THR SEQRES 34 B 697 ALA ARG LEU ARG PRO VAL ILE TYR VAL SER GLN PRO PHE SEQRES 35 B 697 ILE TYR ILE LEU LEU PHE SER GLU ILE THR PRO SER PRO SEQRES 36 B 697 SER THR TRP PRO THR LEU ALA GLU SER LEU HIS ALA GLN SEQRES 37 B 697 LEU SER PRO LEU GLN LYS PRO LEU LEU HIS SER THR SER SEQRES 38 B 697 TYR ARG PRO GLU ARG PRO VAL VAL GLU THR THR SER SER SEQRES 39 B 697 SER GLY THR THR THR GLN HIS GLN ILE PHE ASP LEU VAL SEQRES 40 B 697 TYR ASP THR GLU THR LEU THR LEU GLN SER THR ILE PRO SEQRES 41 B 697 ASN ILE PRO ASP PRO PHE PRO TYR SER ALA THR THR PRO SEQRES 42 B 697 THR GLY HIS SER THR GLY GLN GLN HIS HIS GLN GLN SER SEQRES 43 B 697 ILE TRP THR ARG VAL GLU ALA LEU GLN THR HIS ALA GLN SEQRES 44 B 697 ILE LEU ALA ILE LEU SER SER GLY ARG ALA ILE PRO THR SEQRES 45 B 697 ASP PRO SER SER PHE THR HIS LEU PRO TRP GLU GLU GLY SEQRES 46 B 697 GLU ARG THR CYS LYS THR ALA ARG GLY TRP TRP ILE VAL SEQRES 47 B 697 TRP THR ARG VAL VAL GLU HIS SER PRO PRO ASP ALA VAL SEQRES 48 B 697 SER LEU HIS HIS ALA ARG ASP ASP ASP ASP ASN ASP ASP SEQRES 49 B 697 ASP ALA SER CYS SER VAL LEU GLY HIS LEU ARG SER VAL SEQRES 50 B 697 SER SER SER HIS ALA ALA GLY SER THR SER SER SER SER SEQRES 51 B 697 GLY SER GLY PHE GLY LEU GLY ALA ILE PRO GLY LEU GLY SEQRES 52 B 697 GLY LEU GLY GLY TRP ALA ALA ASP GLY ALA THR ARG LEU SEQRES 53 B 697 ALA GLN GLY ILE GLY ILE ASP THR ARG ARG TYR VAL GLU SEQRES 54 B 697 GLY LEU LEU THR SER LEU GLY ARG HELIX 1 AA1 PRO A 210 GLY A 220 1 11 HELIX 2 AA2 ASP A 241 ALA A 262 1 22 HELIX 3 AA3 SER A 295 LEU A 314 1 20 HELIX 4 AA4 THR A 315 PHE A 323 1 9 HELIX 5 AA5 GLY A 337 GLY A 352 1 16 HELIX 6 AA6 SER A 353 SER A 359 1 7 HELIX 7 AA7 ARG A 367 SER A 381 1 15 HELIX 8 AA8 HIS A 409 PHE A 421 1 13 HELIX 9 AA9 SER A 496 GLU A 498 5 3 HELIX 10 AB1 ALA A 499 GLY A 518 1 20 HELIX 11 AB2 GLY A 518 SER A 529 1 12 HELIX 12 AB3 SER A 533 LEU A 538 1 6 HELIX 13 AB4 THR A 570 HIS A 593 1 24 HELIX 14 AB5 GLY A 635 GLU A 653 1 19 HELIX 15 AB6 GLU A 653 PHE A 658 1 6 HELIX 16 AB7 PRO B 25 GLY B 28 5 4 HELIX 17 AB8 THR B 33 ASP B 36 5 4 HELIX 18 AB9 ALA B 44 HIS B 54 1 11 HELIX 19 AC1 LYS B 95 ASP B 120 1 26 HELIX 20 AC2 PRO B 192 HIS B 211 1 20 HELIX 21 AC3 SER B 214 GLY B 223 1 10 HELIX 22 AC4 GLY B 223 TRP B 242 1 20 HELIX 23 AC5 ASN B 249 PHE B 255 1 7 HELIX 24 AC6 GLU B 272 ARG B 275 5 4 HELIX 25 AC7 GLY B 276 VAL B 290 1 15 HELIX 26 AC8 ASP B 337 TRP B 354 1 18 HELIX 27 AC9 SER B 553 SER B 555 5 3 HELIX 28 AD1 THR B 556 SER B 569 1 14 HELIX 29 AD2 GLN B 572 SER B 580 1 9 HELIX 30 AD3 THR B 648 GLY B 666 1 19 SHEET 1 AA110 PRO A 234 SER A 237 0 SHEET 2 AA110 LYS A 223 LEU A 228 -1 N ILE A 227 O TRP A 236 SHEET 3 AA110 LEU A 284 SER A 290 -1 O TYR A 285 N LEU A 228 SHEET 4 AA110 VAL A 274 LYS A 281 -1 N ARG A 275 O SER A 290 SHEET 5 AA110 LEU A 266 ALA A 271 -1 N PHE A 269 O PHE A 276 SHEET 6 AA110 THR B 126 THR B 129 -1 O ASP B 128 N GLY A 268 SHEET 7 AA110 ALA B 132 GLU B 140 -1 O VAL B 134 N ILE B 127 SHEET 8 AA110 TRP B 143 ASP B 150 -1 O ILE B 149 N ARG B 133 SHEET 9 AA110 LEU B 17 TYR B 23 -1 N ALA B 21 O LEU B 146 SHEET 10 AA110 ILE B 38 THR B 43 -1 O ALA B 42 N LEU B 20 SHEET 1 AA2 5 LYS A 396 ILE A 401 0 SHEET 2 AA2 5 TYR A 388 ALA A 393 -1 N LEU A 391 O VAL A 398 SHEET 3 AA2 5 THR A 488 SER A 494 -1 O ALA A 489 N VAL A 392 SHEET 4 AA2 5 TYR A 449 PHE A 454 -1 N TYR A 451 O LEU A 492 SHEET 5 AA2 5 ASN A 433 PRO A 436 -1 N ILE A 435 O MET A 450 SHEET 1 AA3 6 GLN A 555 MET A 558 0 SHEET 2 AA3 6 HIS A 545 SER A 550 -1 N SER A 550 O GLN A 555 SHEET 3 AA3 6 PHE A 624 PRO A 631 -1 O TYR A 627 N LEU A 547 SHEET 4 AA3 6 LEU A 614 TRP A 619 -1 N ALA A 615 O ALA A 630 SHEET 5 AA3 6 LEU A 599 ALA A 606 -1 N SER A 604 O CYS A 616 SHEET 6 AA3 6 THR B 687 THR B 690 -1 O LYS B 689 N VAL A 601 SHEET 1 AA4 2 THR B 152 LEU B 154 0 SHEET 2 AA4 2 GLU B 184 SER B 186 -1 O GLU B 184 N LEU B 154 SHEET 1 AA5 3 ILE B 258 LYS B 259 0 SHEET 2 AA5 3 THR B 613 SER B 616 1 O LEU B 614 N ILE B 258 SHEET 3 AA5 3 LEU B 605 TYR B 607 -1 N VAL B 606 O GLN B 615 SHEET 1 AA6 5 GLY B 327 PHE B 330 0 SHEET 2 AA6 5 LEU B 293 ARG B 300 -1 N VAL B 298 O PHE B 330 SHEET 3 AA6 5 ILE B 542 PHE B 547 -1 O ILE B 544 N VAL B 297 SHEET 4 AA6 5 ARG B 532 VAL B 537 -1 N VAL B 534 O LEU B 545 SHEET 5 AA6 5 PHE B 471 LEU B 472 -1 N LEU B 472 O ILE B 535 SHEET 1 AA7 3 GLN B 601 ILE B 602 0 SHEET 2 AA7 3 LEU B 733 SER B 739 -1 O SER B 739 N GLN B 601 SHEET 3 AA7 3 TRP B 695 ARG B 700 -1 N VAL B 697 O VAL B 736 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 3411 VAL A 664 TER 6974 HIS B 740 MASTER 619 0 0 30 34 0 0 6 6962 2 0 106 END