HEADER TRANSPORT PROTEIN 01-JUL-25 9RSJ TITLE CRYO-EM STRUCTURE OF MATE TRANSPORTER NORM-VC IN COMPLEX WITH TITLE 2 DOXORUBICIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MULTIDRUG RESISTANCE PROTEIN NORM; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MULTIDRUG-EFFLUX TRANSPORTER,NA(+)/DRUG ANTIPORTER; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: NABFAB HC; COMPND 8 CHAIN: H; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: NABFAB LC; COMPND 12 CHAIN: L; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: NORM-NB17_4; COMPND 16 CHAIN: N; COMPND 17 ENGINEERED: YES; COMPND 18 OTHER_DETAILS: NANOBODY; COMPND 19 MOL_ID: 5; COMPND 20 MOLECULE: ANTI-FAB NANOBODY; COMPND 21 CHAIN: K; COMPND 22 ENGINEERED: YES; COMPND 23 OTHER_DETAILS: NANOBODY SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 GENE: VCM66_1481; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 9 ORGANISM_TAXID: 32630; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 12 MOL_ID: 3; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 MOL_ID: 4; SOURCE 18 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 19 ORGANISM_TAXID: 32630; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 MOL_ID: 5; SOURCE 23 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 24 ORGANISM_TAXID: 9844; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NABFAB, SUBSTRATE, MULTIDRUG TRANSPORTER, TRANSPORT PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR K.ROMANE,P.Y.HSIEH,J.KOWAL,K.P.LOCHER,H.W.VAN VEEN REVDAT 2 10-DEC-25 9RSJ 1 JRNL REVDAT 1 26-NOV-25 9RSJ 0 JRNL AUTH P.Y.HSIEH,K.ROMANE,J.KOWAL,K.P.LOCHER,H.W.VAN VEEN JRNL TITL DOXORUBICIN RECOGNITION AND TRANSPORT BY THE MATE MULTIDRUG JRNL TITL 2 TRANSPORTER NORM FROM VIBRIO CHOLERAE. JRNL REF J.MOL.BIOL. V. 438 69549 2025 JRNL REFN ESSN 1089-8638 JRNL PMID 41260293 JRNL DOI 10.1016/J.JMB.2025.169549 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, COOT, CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.100 REMARK 3 NUMBER OF PARTICLES : 327809 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9RSJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-JUL-25. REMARK 100 THE DEPOSITION ID IS D_1292149002. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : MATE TRANSPORTER NORM FROM REMARK 245 VIBRIO CHOLERAE IN COMPLEX WITH REMARK 245 NABFAB, NB17_4, ANTI-FAB REMARK 245 NANOBODY AND DOXORUBICIN REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2400.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L, N, K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ASN A 3 REMARK 465 THR A 416 REMARK 465 GLU A 417 REMARK 465 GLU H -2 REMARK 465 ILE H -1 REMARK 465 SER H 0 REMARK 465 GLU H 1 REMARK 465 SER H 215 REMARK 465 CYS H 216 REMARK 465 ASP H 217 REMARK 465 LYS H 218 REMARK 465 THR H 219 REMARK 465 HIS H 220 REMARK 465 THR H 221 REMARK 465 SER L 0 REMARK 465 ASP L 1 REMARK 465 ILE L 2 REMARK 465 GLN L 3 REMARK 465 GLY L 212 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 465 HIS N 114 REMARK 465 HIS N 115 REMARK 465 HIS N 116 REMARK 465 HIS N 117 REMARK 465 HIS N 118 REMARK 465 HIS N 119 REMARK 465 GLU N 120 REMARK 465 PRO N 121 REMARK 465 GLU N 122 REMARK 465 ALA N 123 REMARK 465 GLY K -1 REMARK 465 SER K 0 REMARK 465 GLN K 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 209 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO L 141 C - N - CD ANGL. DEV. = -13.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 5 -70.78 63.60 REMARK 500 HIS A 6 -100.39 50.31 REMARK 500 LEU A 18 -9.10 74.24 REMARK 500 GLN A 85 18.05 51.46 REMARK 500 SER A 218 -68.73 49.12 REMARK 500 LYS A 219 -8.67 76.15 REMARK 500 GLU A 228 -36.83 -130.05 REMARK 500 PHE A 339 50.43 -91.89 REMARK 500 ASP A 371 44.23 -82.63 REMARK 500 ALA A 372 -40.68 -131.53 REMARK 500 ASP A 386 55.71 -95.46 REMARK 500 LEU A 401 -62.05 -91.46 REMARK 500 ALA A 435 -19.41 73.55 REMARK 500 SER A 451 -10.40 71.58 REMARK 500 ASP A 452 0.03 59.39 REMARK 500 ARG H 66 -60.70 -94.92 REMARK 500 ASN H 204 48.84 39.86 REMARK 500 GLN L 27 147.71 -173.76 REMARK 500 ALA L 51 -7.87 71.57 REMARK 500 PRO L 80 7.70 -68.70 REMARK 500 ASP L 82 52.77 -91.05 REMARK 500 SER L 93 -76.09 60.68 REMARK 500 SER L 94 13.01 -140.19 REMARK 500 ASN L 138 66.82 60.09 REMARK 500 TYR L 140 67.31 -151.13 REMARK 500 PHE N 29 -8.23 69.43 REMARK 500 SER N 62 48.30 -92.25 REMARK 500 VAL K 48 -59.71 -121.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR L 140 PRO L 141 109.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7PHP RELATED DB: PDB REMARK 900 7PHP CONTAINS THE SAME PROTEIN COMPLEX IN THE APO STATE REMARK 900 RELATED ID: EMD-54220 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF MATE TRANSPORTER NORM-VC IN COMPLEX WITH REMARK 900 DOXORUBICIN DBREF 9RSJ A 1 461 UNP C3LML9 C3LML9_VIBCM 1 461 DBREF 9RSJ H -2 221 PDB 9RSJ 9RSJ -2 221 DBREF 9RSJ L 0 214 PDB 9RSJ 9RSJ 0 214 DBREF 9RSJ N 1 123 PDB 9RSJ 9RSJ 1 123 DBREF 9RSJ K -1 113 PDB 9RSJ 9RSJ -1 113 SEQRES 1 A 461 MET GLU ASN SER VAL HIS ARG TYR LYS LYS GLU ALA SER SEQRES 2 A 461 ASN LEU ILE LYS LEU ALA THR PRO VAL LEU ILE ALA SER SEQRES 3 A 461 VAL ALA GLN THR GLY MET GLY PHE VAL ASP THR ILE MET SEQRES 4 A 461 ALA GLY GLY VAL SER ALA ILE ASP MET ALA ALA VAL SER SEQRES 5 A 461 ILE ALA ALA SER ILE TRP LEU PRO SER ILE LEU PHE GLY SEQRES 6 A 461 VAL GLY LEU LEU MET ALA LEU VAL PRO VAL VAL ALA GLN SEQRES 7 A 461 LEU ASN GLY ALA GLY ARG GLN HIS LYS ILE PRO PHE GLU SEQRES 8 A 461 VAL HIS GLN GLY LEU ILE LEU ALA LEU LEU VAL SER VAL SEQRES 9 A 461 PRO ILE ILE ALA VAL LEU PHE GLN THR GLN PHE ILE ILE SEQRES 10 A 461 ARG PHE MET ASP VAL GLU GLU ALA MET ALA THR LYS THR SEQRES 11 A 461 VAL GLY TYR MET HIS ALA VAL ILE PHE ALA VAL PRO ALA SEQRES 12 A 461 TYR LEU LEU PHE GLN ALA LEU ARG SER PHE THR ASP GLY SEQRES 13 A 461 MET SER LEU THR LYS PRO ALA MET VAL ILE GLY PHE ILE SEQRES 14 A 461 GLY LEU LEU LEU ASN ILE PRO LEU ASN TRP ILE PHE VAL SEQRES 15 A 461 TYR GLY LYS PHE GLY ALA PRO GLU LEU GLY GLY VAL GLY SEQRES 16 A 461 CYS GLY VAL ALA THR ALA ILE VAL TYR TRP ILE MET LEU SEQRES 17 A 461 LEU LEU LEU LEU PHE TYR ILE VAL THR SER LYS ARG LEU SEQRES 18 A 461 ALA HIS VAL LYS VAL PHE GLU THR PHE HIS LYS PRO GLN SEQRES 19 A 461 PRO LYS GLU LEU ILE ARG LEU PHE ARG LEU GLY PHE PRO SEQRES 20 A 461 VAL ALA ALA ALA LEU PHE PHE GLU VAL THR LEU PHE ALA SEQRES 21 A 461 VAL VAL ALA LEU LEU VAL ALA PRO LEU GLY SER THR VAL SEQRES 22 A 461 VAL ALA ALA HIS GLN VAL ALA LEU ASN PHE SER SER LEU SEQRES 23 A 461 VAL PHE MET PHE PRO MET SER ILE GLY ALA ALA VAL SER SEQRES 24 A 461 ILE ARG VAL GLY HIS LYS LEU GLY GLU GLN ASP THR LYS SEQRES 25 A 461 GLY ALA ALA ILE ALA ALA ASN VAL GLY LEU MET THR GLY SEQRES 26 A 461 LEU ALA THR ALA CYS ILE THR ALA LEU LEU THR VAL LEU SEQRES 27 A 461 PHE ARG GLU GLN ILE ALA LEU LEU TYR THR GLU ASN GLN SEQRES 28 A 461 VAL VAL VAL ALA LEU ALA MET GLN LEU LEU LEU PHE ALA SEQRES 29 A 461 ALA ILE TYR GLN CYS MET ASP ALA VAL GLN VAL VAL ALA SEQRES 30 A 461 ALA GLY SER LEU ARG GLY TYR LYS ASP MET THR ALA ILE SEQRES 31 A 461 PHE HIS ARG THR PHE ILE SER TYR TRP VAL LEU GLY LEU SEQRES 32 A 461 PRO THR GLY TYR ILE LEU GLY MET THR ASN TRP LEU THR SEQRES 33 A 461 GLU GLN PRO LEU GLY ALA LYS GLY PHE TRP LEU GLY PHE SEQRES 34 A 461 ILE ILE GLY LEU SER ALA ALA ALA LEU MET LEU GLY GLN SEQRES 35 A 461 ARG LEU TYR TRP LEU GLN LYS GLN SER ASP ASP VAL GLN SEQRES 36 A 461 LEU HIS LEU ALA ALA LYS SEQRES 1 H 239 GLU ILE SER GLU VAL GLN LEU VAL GLU SER GLY GLY GLY SEQRES 2 H 239 LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA SEQRES 3 H 239 ALA SER GLY PHE ASN PHE SER TYR TYR SER ILE HIS TRP SEQRES 4 H 239 VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SEQRES 5 H 239 TYR ILE SER SER SER SER SER TYR THR SER TYR ALA ASP SEQRES 6 H 239 SER VAL LYS GLY ARG PHE THR ILE SER ALA ASP THR SER SEQRES 7 H 239 LYS ASN THR ALA TYR LEU GLN MET ASN SER LEU ARG ALA SEQRES 8 H 239 GLU ASP THR ALA VAL TYR TYR CYS ALA ARG GLY TYR GLN SEQRES 9 H 239 TYR TRP GLN TYR HIS ALA SER TRP TYR TRP ASN GLY GLY SEQRES 10 H 239 LEU ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 11 H 239 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 12 H 239 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 13 H 239 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 14 H 239 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 15 H 239 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 16 H 239 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 17 H 239 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 18 H 239 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 19 H 239 ASP LYS THR HIS THR SEQRES 1 L 215 SER ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER SEQRES 2 L 215 ALA SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SEQRES 3 L 215 SER GLN SER VAL SER SER ALA VAL ALA TRP TYR GLN GLN SEQRES 4 L 215 LYS PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SEQRES 5 L 215 SER SER LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SEQRES 6 L 215 SER ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER SEQRES 7 L 215 LEU GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SEQRES 8 L 215 SER SER SER SER LEU ILE THR PHE GLY GLN GLY THR LYS SEQRES 9 L 215 VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP SER GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 N 132 GLN ARG GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 N 132 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 N 132 ILE ILE PHE LYS ILE ASN ASP MET GLY TRP PHE ARG GLN SEQRES 4 N 132 ALA PRO GLY LYS GLU ARG GLU GLY VAL ALA GLY ILE THR SEQRES 5 N 132 SER GLY GLY ARG THR ASN TYR ALA ASP SER VAL LYS GLY SEQRES 6 N 132 ARG PHE ILE ILE SER ARG ASP ASN VAL LYS ASN THR VAL SEQRES 7 N 132 TYR LEU GLN MET ASN SER LEU GLU PRO GLU ASP THR ALA SEQRES 8 N 132 VAL TYR TYR CYS LYS SER ASP GLY LEU ILE SER TYR ALA SEQRES 9 N 132 ALA SER GLN LEU SER THR TYR TRP GLY LYS GLY THR PRO SEQRES 10 N 132 VAL THR VAL SER SER HIS HIS HIS HIS HIS HIS GLU PRO SEQRES 11 N 132 GLU ALA SEQRES 1 K 123 GLY SER GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU SEQRES 2 K 123 VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SEQRES 3 K 123 SER GLY ARG THR ILE SER ARG TYR ALA MET SER TRP PHE SEQRES 4 K 123 ARG GLN ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA VAL SEQRES 5 K 123 ALA ARG ARG SER GLY ASP GLY ALA PHE TYR ALA ASP SER SEQRES 6 K 123 VAL GLN GLY ARG PHE THR VAL SER ARG ASP ASP ALA LYS SEQRES 7 K 123 ASN THR VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU SEQRES 8 K 123 ASP THR ALA VAL TYR TYR CYS ALA ILE ASP SER ASP THR SEQRES 9 K 123 PHE TYR SER GLY SER TYR ASP TYR TRP GLY GLN GLY THR SEQRES 10 K 123 GLN VAL THR VAL SER SER HET DM2 A 501 39 HETNAM DM2 DOXORUBICIN HETSYN DM2 ADRIAMYCIN FORMUL 6 DM2 C27 H29 N O11 HELIX 1 AA1 ARG A 7 LYS A 17 1 11 HELIX 2 AA2 ALA A 19 GLY A 41 1 23 HELIX 3 AA3 ALA A 45 LEU A 69 1 25 HELIX 4 AA4 ALA A 71 GLY A 83 1 13 HELIX 5 AA5 LYS A 87 GLN A 112 1 26 HELIX 6 AA6 GLN A 112 ILE A 117 1 6 HELIX 7 AA7 GLU A 123 ILE A 138 1 16 HELIX 8 AA8 PHE A 139 MET A 157 1 19 HELIX 9 AA9 THR A 160 TYR A 183 1 24 HELIX 10 AB1 LEU A 191 GLY A 193 5 3 HELIX 11 AB2 VAL A 194 SER A 218 1 25 HELIX 12 AB3 LYS A 225 THR A 229 5 5 HELIX 13 AB4 GLN A 234 LEU A 244 1 11 HELIX 14 AB5 PHE A 246 ALA A 267 1 22 HELIX 15 AB6 PRO A 268 GLY A 270 5 3 HELIX 16 AB7 SER A 271 GLU A 308 1 38 HELIX 17 AB8 ASP A 310 PHE A 339 1 30 HELIX 18 AB9 GLU A 341 THR A 348 1 8 HELIX 19 AC1 ASN A 350 TYR A 384 1 35 HELIX 20 AC2 ASP A 386 TRP A 399 1 14 HELIX 21 AC3 LEU A 401 GLY A 410 1 10 HELIX 22 AC4 GLY A 421 GLN A 448 1 28 HELIX 23 AC5 ASP A 453 LYS A 461 1 9 HELIX 24 AC6 ASP H 61 LYS H 64 5 4 HELIX 25 AC7 TYR H 98 ALA H 100C 1 6 HELIX 26 AC8 SER H 187 GLN H 192 5 6 HELIX 27 AC9 SER L 121 GLY L 128 1 8 HELIX 28 AD1 LYS L 183 HIS L 189 1 7 HELIX 29 AD2 ALA N 60 LYS N 64 5 5 HELIX 30 AD3 GLU N 83 THR N 87 5 5 HELIX 31 AD4 LYS K 83 THR K 87 5 5 SHEET 1 AA1 4 GLN H 3 GLU H 6 0 SHEET 2 AA1 4 SER H 17 SER H 25 -1 O ALA H 23 N VAL H 5 SHEET 3 AA1 4 THR H 77 ASN H 82A-1 O MET H 82 N LEU H 18 SHEET 4 AA1 4 THR H 68 ASP H 72 -1 N THR H 68 O GLN H 81 SHEET 1 AA2 6 GLY H 10 VAL H 12 0 SHEET 2 AA2 6 THR H 107 VAL H 111 1 O THR H 110 N GLY H 10 SHEET 3 AA2 6 ALA H 88 TYR H 96 -1 N TYR H 90 O THR H 107 SHEET 4 AA2 6 TYR H 32 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O ILE H 51 N ILE H 34 SHEET 6 AA2 6 THR H 57 TYR H 59 -1 O SER H 58 N TYR H 50 SHEET 1 AA3 4 SER H 120 LEU H 124 0 SHEET 2 AA3 4 LEU H 138 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA3 4 TYR H 176 VAL H 182 -1 O LEU H 178 N VAL H 142 SHEET 4 AA3 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA4 4 SER H 120 LEU H 124 0 SHEET 2 AA4 4 LEU H 138 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA4 4 TYR H 176 VAL H 182 -1 O LEU H 178 N VAL H 142 SHEET 4 AA4 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AA5 3 THR H 151 TRP H 154 0 SHEET 2 AA5 3 TYR H 194 HIS H 200 -1 O ASN H 199 N THR H 151 SHEET 3 AA5 3 THR H 205 VAL H 211 -1 O VAL H 207 N VAL H 198 SHEET 1 AA6 4 THR L 5 GLN L 6 0 SHEET 2 AA6 4 VAL L 19 ARG L 24 -1 O ARG L 24 N THR L 5 SHEET 3 AA6 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 AA6 4 PHE L 62 SER L 65 -1 N SER L 63 O THR L 74 SHEET 1 AA7 5 SER L 10 ALA L 13 0 SHEET 2 AA7 5 THR L 102 ILE L 106 1 O GLU L 105 N LEU L 11 SHEET 3 AA7 5 THR L 85 SER L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AA7 5 ALA L 34 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 AA7 5 LYS L 45 ILE L 48 -1 O LYS L 45 N GLN L 37 SHEET 1 AA8 4 SER L 10 ALA L 13 0 SHEET 2 AA8 4 THR L 102 ILE L 106 1 O GLU L 105 N LEU L 11 SHEET 3 AA8 4 THR L 85 SER L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AA8 4 LEU L 95 THR L 97 -1 O THR L 97 N GLN L 90 SHEET 1 AA9 4 SER L 114 PHE L 118 0 SHEET 2 AA9 4 THR L 129 PHE L 139 -1 O VAL L 133 N PHE L 118 SHEET 3 AA9 4 TYR L 173 SER L 182 -1 O LEU L 181 N ALA L 130 SHEET 4 AA9 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB1 4 ALA L 153 LEU L 154 0 SHEET 2 AB1 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB1 4 VAL L 191 THR L 197 -1 O ALA L 193 N LYS L 149 SHEET 4 AB1 4 VAL L 205 ASN L 210 -1 O PHE L 209 N TYR L 192 SHEET 1 AB2 4 LEU N 4 SER N 7 0 SHEET 2 AB2 4 LEU N 18 ALA N 24 -1 O SER N 21 N SER N 7 SHEET 3 AB2 4 THR N 77 MET N 82 -1 O MET N 82 N LEU N 18 SHEET 4 AB2 4 PHE N 67 ASP N 72 -1 N ILE N 68 O GLN N 81 SHEET 1 AB3 5 GLY N 10 VAL N 12 0 SHEET 2 AB3 5 THR N 107 VAL N 111 1 O THR N 110 N VAL N 12 SHEET 3 AB3 5 ALA N 88 GLY N 96 -1 N TYR N 90 O THR N 107 SHEET 4 AB3 5 ASP N 33 ARG N 38 -1 N GLY N 35 O LYS N 93 SHEET 5 AB3 5 GLU N 46 ILE N 51 -1 O VAL N 48 N TRP N 36 SHEET 1 AB4 4 GLY N 10 VAL N 12 0 SHEET 2 AB4 4 THR N 107 VAL N 111 1 O THR N 110 N VAL N 12 SHEET 3 AB4 4 ALA N 88 GLY N 96 -1 N TYR N 90 O THR N 107 SHEET 4 AB4 4 SER N 100F TYR N 102 -1 O SER N 100F N GLY N 96 SHEET 1 AB5 4 GLN K 3 SER K 7 0 SHEET 2 AB5 4 SER K 17 SER K 25 -1 O ALA K 23 N GLN K 5 SHEET 3 AB5 4 THR K 77 ASN K 82A-1 O MET K 82 N LEU K 18 SHEET 4 AB5 4 PHE K 67 ASP K 72 -1 N SER K 70 O TYR K 79 SHEET 1 AB6 6 GLY K 10 VAL K 12 0 SHEET 2 AB6 6 THR K 107 VAL K 111 1 O THR K 110 N GLY K 10 SHEET 3 AB6 6 ALA K 88 ASP K 95 -1 N ALA K 88 O VAL K 109 SHEET 4 AB6 6 ALA K 33 GLN K 39 -1 N GLN K 39 O VAL K 89 SHEET 5 AB6 6 ARG K 45 ALA K 51 -1 O ALA K 51 N MET K 34 SHEET 6 AB6 6 ALA K 57 TYR K 59 -1 O PHE K 58 N VAL K 50 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.03 SSBOND 2 CYS H 140 CYS H 196 1555 1555 2.03 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 4 CYS L 134 CYS L 194 1555 1555 2.04 SSBOND 5 CYS N 22 CYS N 92 1555 1555 2.03 CISPEP 1 PHE H 146 PRO H 147 0 -8.69 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 3473 LYS A 461 TER 5196 LYS H 214 TER 6779 ARG L 211 TER 7699 SER N 113 TER 8630 SER K 113 HETATM 8631 C1 DM2 A 501 151.491 151.090 124.522 1.00 86.20 C HETATM 8632 C2 DM2 A 501 151.720 151.355 123.158 1.00 82.34 C HETATM 8633 C3 DM2 A 501 151.817 152.677 122.721 1.00 81.84 C HETATM 8634 C4 DM2 A 501 151.692 153.729 123.629 1.00 87.55 C HETATM 8635 O4 DM2 A 501 151.784 155.125 123.248 1.00 87.19 O HETATM 8636 C5 DM2 A 501 151.462 153.473 125.002 1.00 85.48 C HETATM 8637 C6 DM2 A 501 151.317 154.613 126.033 1.00 82.73 C HETATM 8638 O6 DM2 A 501 151.389 155.718 125.737 1.00 78.19 O HETATM 8639 C7 DM2 A 501 151.066 154.247 127.524 1.00 85.65 C HETATM 8640 C8 DM2 A 501 150.920 155.205 128.532 1.00 88.10 C HETATM 8641 O8 DM2 A 501 151.021 156.533 128.095 1.00 87.21 O HETATM 8642 C9 DM2 A 501 150.704 155.006 129.878 1.00 89.18 C HETATM 8643 C10 DM2 A 501 150.540 156.168 130.932 1.00 93.41 C HETATM 8644 O10 DM2 A 501 149.183 156.632 130.699 1.00 91.44 O HETATM 8645 C11 DM2 A 501 150.647 155.794 132.379 1.00 96.94 C HETATM 8646 C12 DM2 A 501 149.891 154.496 132.684 1.00 97.85 C HETATM 8647 O12 DM2 A 501 148.515 154.726 132.447 1.00 98.47 O HETATM 8648 C13 DM2 A 501 150.087 154.139 134.197 1.00104.72 C HETATM 8649 O13 DM2 A 501 150.844 154.743 134.844 1.00 99.90 O HETATM 8650 C14 DM2 A 501 149.270 152.974 134.842 1.00100.97 C HETATM 8651 O14 DM2 A 501 150.003 151.721 134.678 1.00107.44 O HETATM 8652 C15 DM2 A 501 150.342 153.345 131.826 1.00 85.45 C HETATM 8653 C16 DM2 A 501 150.601 153.651 130.288 1.00 85.88 C HETATM 8654 C17 DM2 A 501 150.736 152.648 129.331 1.00 89.81 C HETATM 8655 O17 DM2 A 501 150.671 151.259 129.555 1.00 93.10 O HETATM 8656 C18 DM2 A 501 150.968 152.929 127.952 1.00 87.13 C HETATM 8657 C19 DM2 A 501 151.113 151.799 126.926 1.00 84.98 C HETATM 8658 O19 DM2 A 501 151.033 150.681 127.269 1.00 87.16 O HETATM 8659 C20 DM2 A 501 151.364 152.144 125.430 1.00 84.15 C HETATM 8660 C21 DM2 A 501 150.681 155.586 122.428 1.00 81.64 C HETATM 8661 C1' DM2 A 501 149.031 157.917 131.133 1.00 88.72 C HETATM 8662 C2' DM2 A 501 149.135 158.846 129.936 1.00 84.52 C HETATM 8663 C3' DM2 A 501 148.085 158.589 128.933 1.00 79.94 C HETATM 8664 N3' DM2 A 501 148.106 159.732 127.916 1.00 79.81 N HETATM 8665 C4' DM2 A 501 146.712 158.518 129.527 1.00 81.44 C HETATM 8666 O4' DM2 A 501 146.295 159.834 129.843 1.00 81.43 O HETATM 8667 C5' DM2 A 501 146.640 157.664 130.791 1.00 80.58 C HETATM 8668 O5' DM2 A 501 147.681 158.016 131.761 1.00 83.23 O HETATM 8669 C6' DM2 A 501 145.305 157.896 131.444 1.00 77.88 C CONECT 3615 4197 CONECT 4197 3615 CONECT 4641 5055 CONECT 5055 4641 CONECT 5335 5832 CONECT 5832 5335 CONECT 6167 6646 CONECT 6646 6167 CONECT 6934 7501 CONECT 7501 6934 CONECT 8631 8632 8659 CONECT 8632 8631 8633 CONECT 8633 8632 8634 CONECT 8634 8633 8635 8636 CONECT 8635 8634 8660 CONECT 8636 8634 8637 8659 CONECT 8637 8636 8638 8639 CONECT 8638 8637 CONECT 8639 8637 8640 8656 CONECT 8640 8639 8641 8642 CONECT 8641 8640 CONECT 8642 8640 8643 8653 CONECT 8643 8642 8644 8645 CONECT 8644 8643 8661 CONECT 8645 8643 8646 CONECT 8646 8645 8647 8648 8652 CONECT 8647 8646 CONECT 8648 8646 8649 8650 CONECT 8649 8648 CONECT 8650 8648 8651 CONECT 8651 8650 CONECT 8652 8646 8653 CONECT 8653 8642 8652 8654 CONECT 8654 8653 8655 8656 CONECT 8655 8654 CONECT 8656 8639 8654 8657 CONECT 8657 8656 8658 8659 CONECT 8658 8657 CONECT 8659 8631 8636 8657 CONECT 8660 8635 CONECT 8661 8644 8662 8668 CONECT 8662 8661 8663 CONECT 8663 8662 8664 8665 CONECT 8664 8663 CONECT 8665 8663 8666 8667 CONECT 8666 8665 CONECT 8667 8665 8668 8669 CONECT 8668 8661 8667 CONECT 8669 8667 MASTER 232 0 1 31 65 0 0 6 8656 5 49 93 END