data_9RTJ # _entry.id 9RTJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.411 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9RTJ pdb_00009rtj 10.2210/pdb9rtj/pdb WWPDB D_1292148613 ? ? BMRB 35007 ? 10.13018/BMR35007 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-03-25 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 9RTJ _pdbx_database_status.recvd_initial_deposition_date 2025-07-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs . _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Hydrid structure of the helix bundle domain of pRN1 primase in complex with DNA, ATP and dGTP' _pdbx_database_related.db_id 35007 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email allain@bc.biol.ethz.ch _pdbx_contact_author.name_first Frederic _pdbx_contact_author.name_last Allain _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2131-6237 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wu, P.' 1 ? 'Damberger, F.F.' 2 ? 'Zehnder, J.' 3 ? 'Schroder, N.' 4 ? 'Lipps, G.' 5 ? 'Wiegand, T.' 6 ? 'Allain, F.H.-T.' 7 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Molecular Basis for Primer Synthesis Initiation by DNA Primase' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wu, P.' 1 ? primary 'Damberger, F.F.' 2 ? primary 'Zehnder, J.' 3 ? primary 'Schroder, N.' 4 ? primary 'Lipps, G.' 5 ? primary 'Wiegand, T.' 6 ? primary 'Allain, F.H.-T.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SF3 helicase domain-containing protein' 13855.133 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*CP*A)-3') ; 2706.785 1 ? ? ? ? 3 non-polymer syn "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? ? ? 4 non-polymer syn "ADENOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GHMTVVEFEELRKELVKRDSGKPVEKIKEEICTKSPPKLIKEIICENKTYADVNIDRSRGDWHVILYLMKHGVTDPDKIL ELLPRDSKAKENEKWNTQKYFVITLSKAWSVVKKYLEA ; ;GHMTVVEFEELRKELVKRDSGKPVEKIKEEICTKSPPKLIKEIICENKTYADVNIDRSRGDWHVILYLMKHGVTDPDKIL ELLPRDSKAKENEKWNTQKYFVITLSKAWSVVKKYLEA ; B ? 2 polydeoxyribonucleotide no no '(DC)(DT)(DG)(DT)(DG)(DC)(DT)(DC)(DA)' CTGTGCTCA A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" DGT 4 "ADENOSINE-5'-TRIPHOSPHATE" ATP 5 'MAGNESIUM ION' MG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MET n 1 4 THR n 1 5 VAL n 1 6 VAL n 1 7 GLU n 1 8 PHE n 1 9 GLU n 1 10 GLU n 1 11 LEU n 1 12 ARG n 1 13 LYS n 1 14 GLU n 1 15 LEU n 1 16 VAL n 1 17 LYS n 1 18 ARG n 1 19 ASP n 1 20 SER n 1 21 GLY n 1 22 LYS n 1 23 PRO n 1 24 VAL n 1 25 GLU n 1 26 LYS n 1 27 ILE n 1 28 LYS n 1 29 GLU n 1 30 GLU n 1 31 ILE n 1 32 CYS n 1 33 THR n 1 34 LYS n 1 35 SER n 1 36 PRO n 1 37 PRO n 1 38 LYS n 1 39 LEU n 1 40 ILE n 1 41 LYS n 1 42 GLU n 1 43 ILE n 1 44 ILE n 1 45 CYS n 1 46 GLU n 1 47 ASN n 1 48 LYS n 1 49 THR n 1 50 TYR n 1 51 ALA n 1 52 ASP n 1 53 VAL n 1 54 ASN n 1 55 ILE n 1 56 ASP n 1 57 ARG n 1 58 SER n 1 59 ARG n 1 60 GLY n 1 61 ASP n 1 62 TRP n 1 63 HIS n 1 64 VAL n 1 65 ILE n 1 66 LEU n 1 67 TYR n 1 68 LEU n 1 69 MET n 1 70 LYS n 1 71 HIS n 1 72 GLY n 1 73 VAL n 1 74 THR n 1 75 ASP n 1 76 PRO n 1 77 ASP n 1 78 LYS n 1 79 ILE n 1 80 LEU n 1 81 GLU n 1 82 LEU n 1 83 LEU n 1 84 PRO n 1 85 ARG n 1 86 ASP n 1 87 SER n 1 88 LYS n 1 89 ALA n 1 90 LYS n 1 91 GLU n 1 92 ASN n 1 93 GLU n 1 94 LYS n 1 95 TRP n 1 96 ASN n 1 97 THR n 1 98 GLN n 1 99 LYS n 1 100 TYR n 1 101 PHE n 1 102 VAL n 1 103 ILE n 1 104 THR n 1 105 LEU n 1 106 SER n 1 107 LYS n 1 108 ALA n 1 109 TRP n 1 110 SER n 1 111 VAL n 1 112 VAL n 1 113 LYS n 1 114 LYS n 1 115 TYR n 1 116 LEU n 1 117 GLU n 1 118 ALA n 2 1 DC n 2 2 DT n 2 3 DG n 2 4 DT n 2 5 DG n 2 6 DC n 2 7 DT n 2 8 DC n 2 9 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 118 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharolobus islandicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 43080 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 9 _pdbx_entity_src_syn.organism_scientific 'Saccharolobus islandicus' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 43080 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 ATP non-polymer . "ADENOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DGT non-polymer . "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 253 253 GLY GLY B . n A 1 2 HIS 2 254 254 HIS HIS B . n A 1 3 MET 3 255 255 MET MET B . n A 1 4 THR 4 256 256 THR THR B . n A 1 5 VAL 5 257 257 VAL VAL B . n A 1 6 VAL 6 258 258 VAL VAL B . n A 1 7 GLU 7 259 259 GLU GLU B . n A 1 8 PHE 8 260 260 PHE PHE B . n A 1 9 GLU 9 261 261 GLU GLU B . n A 1 10 GLU 10 262 262 GLU GLU B . n A 1 11 LEU 11 263 263 LEU LEU B . n A 1 12 ARG 12 264 264 ARG ARG B . n A 1 13 LYS 13 265 265 LYS LYS B . n A 1 14 GLU 14 266 266 GLU GLU B . n A 1 15 LEU 15 267 267 LEU LEU B . n A 1 16 VAL 16 268 268 VAL VAL B . n A 1 17 LYS 17 269 269 LYS LYS B . n A 1 18 ARG 18 270 270 ARG ARG B . n A 1 19 ASP 19 271 271 ASP ASP B . n A 1 20 SER 20 272 272 SER SER B . n A 1 21 GLY 21 273 273 GLY GLY B . n A 1 22 LYS 22 274 274 LYS LYS B . n A 1 23 PRO 23 275 275 PRO PRO B . n A 1 24 VAL 24 276 276 VAL VAL B . n A 1 25 GLU 25 277 277 GLU GLU B . n A 1 26 LYS 26 278 278 LYS LYS B . n A 1 27 ILE 27 279 279 ILE ILE B . n A 1 28 LYS 28 280 280 LYS LYS B . n A 1 29 GLU 29 281 281 GLU GLU B . n A 1 30 GLU 30 282 282 GLU GLU B . n A 1 31 ILE 31 283 283 ILE ILE B . n A 1 32 CYS 32 284 284 CYS CYS B . n A 1 33 THR 33 285 285 THR THR B . n A 1 34 LYS 34 286 286 LYS LYS B . n A 1 35 SER 35 287 287 SER SER B . n A 1 36 PRO 36 288 288 PRO PRO B . n A 1 37 PRO 37 289 289 PRO PRO B . n A 1 38 LYS 38 290 290 LYS LYS B . n A 1 39 LEU 39 291 291 LEU LEU B . n A 1 40 ILE 40 292 292 ILE ILE B . n A 1 41 LYS 41 293 293 LYS LYS B . n A 1 42 GLU 42 294 294 GLU GLU B . n A 1 43 ILE 43 295 295 ILE ILE B . n A 1 44 ILE 44 296 296 ILE ILE B . n A 1 45 CYS 45 297 297 CYS CYS B . n A 1 46 GLU 46 298 298 GLU GLU B . n A 1 47 ASN 47 299 299 ASN ASN B . n A 1 48 LYS 48 300 300 LYS LYS B . n A 1 49 THR 49 301 301 THR THR B . n A 1 50 TYR 50 302 302 TYR TYR B . n A 1 51 ALA 51 303 303 ALA ALA B . n A 1 52 ASP 52 304 304 ASP ASP B . n A 1 53 VAL 53 305 305 VAL VAL B . n A 1 54 ASN 54 306 306 ASN ASN B . n A 1 55 ILE 55 307 307 ILE ILE B . n A 1 56 ASP 56 308 308 ASP ASP B . n A 1 57 ARG 57 309 309 ARG ARG B . n A 1 58 SER 58 310 310 SER SER B . n A 1 59 ARG 59 311 311 ARG ARG B . n A 1 60 GLY 60 312 312 GLY GLY B . n A 1 61 ASP 61 313 313 ASP ASP B . n A 1 62 TRP 62 314 314 TRP TRP B . n A 1 63 HIS 63 315 315 HIS HIS B . n A 1 64 VAL 64 316 316 VAL VAL B . n A 1 65 ILE 65 317 317 ILE ILE B . n A 1 66 LEU 66 318 318 LEU LEU B . n A 1 67 TYR 67 319 319 TYR TYR B . n A 1 68 LEU 68 320 320 LEU LEU B . n A 1 69 MET 69 321 321 MET MET B . n A 1 70 LYS 70 322 322 LYS LYS B . n A 1 71 HIS 71 323 323 HIS HIS B . n A 1 72 GLY 72 324 324 GLY GLY B . n A 1 73 VAL 73 325 325 VAL VAL B . n A 1 74 THR 74 326 326 THR THR B . n A 1 75 ASP 75 327 327 ASP ASP B . n A 1 76 PRO 76 328 328 PRO PRO B . n A 1 77 ASP 77 329 329 ASP ASP B . n A 1 78 LYS 78 330 330 LYS LYS B . n A 1 79 ILE 79 331 331 ILE ILE B . n A 1 80 LEU 80 332 332 LEU LEU B . n A 1 81 GLU 81 333 333 GLU GLU B . n A 1 82 LEU 82 334 334 LEU LEU B . n A 1 83 LEU 83 335 335 LEU LEU B . n A 1 84 PRO 84 336 336 PRO PRO B . n A 1 85 ARG 85 337 337 ARG ARG B . n A 1 86 ASP 86 338 338 ASP ASP B . n A 1 87 SER 87 339 339 SER SER B . n A 1 88 LYS 88 340 340 LYS LYS B . n A 1 89 ALA 89 341 341 ALA ALA B . n A 1 90 LYS 90 342 342 LYS LYS B . n A 1 91 GLU 91 343 343 GLU GLU B . n A 1 92 ASN 92 344 344 ASN ASN B . n A 1 93 GLU 93 345 345 GLU GLU B . n A 1 94 LYS 94 346 346 LYS LYS B . n A 1 95 TRP 95 347 347 TRP TRP B . n A 1 96 ASN 96 348 348 ASN ASN B . n A 1 97 THR 97 349 349 THR THR B . n A 1 98 GLN 98 350 350 GLN GLN B . n A 1 99 LYS 99 351 351 LYS LYS B . n A 1 100 TYR 100 352 352 TYR TYR B . n A 1 101 PHE 101 353 353 PHE PHE B . n A 1 102 VAL 102 354 354 VAL VAL B . n A 1 103 ILE 103 355 355 ILE ILE B . n A 1 104 THR 104 356 356 THR THR B . n A 1 105 LEU 105 357 357 LEU LEU B . n A 1 106 SER 106 358 358 SER SER B . n A 1 107 LYS 107 359 359 LYS LYS B . n A 1 108 ALA 108 360 360 ALA ALA B . n A 1 109 TRP 109 361 361 TRP TRP B . n A 1 110 SER 110 362 362 SER SER B . n A 1 111 VAL 111 363 363 VAL VAL B . n A 1 112 VAL 112 364 364 VAL VAL B . n A 1 113 LYS 113 365 365 LYS LYS B . n A 1 114 LYS 114 366 366 LYS LYS B . n A 1 115 TYR 115 367 367 TYR TYR B . n A 1 116 LEU 116 368 368 LEU LEU B . n A 1 117 GLU 117 369 369 GLU GLU B . n A 1 118 ALA 118 370 370 ALA ALA B . n B 2 1 DC 1 1 1 DC DC A . n B 2 2 DT 2 2 2 DT DT A . n B 2 3 DG 3 3 3 DG DG A . n B 2 4 DT 4 4 4 DT DT A . n B 2 5 DG 5 5 5 DG DG A . n B 2 6 DC 6 6 6 DC DC A . n B 2 7 DT 7 7 7 DT DT A . n B 2 8 DC 8 8 8 DC DC A . n B 2 9 DA 9 9 9 DA DA A . n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 ATP ? ? ATP ? ? 'SUBJECT OF INVESTIGATION' ? 2 DGT ? ? DGT ? ? 'SUBJECT OF INVESTIGATION' ? 3 MG ? ? MG ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DGT 1 401 400 DGT DGT B . D 4 ATP 1 402 410 ATP ATP B . E 5 MG 1 403 420 MG MG B . F 5 MG 1 404 430 MG MG B . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9RTJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.000 _cell.length_a_esd ? _cell.length_b 1.000 _cell.length_b_esd ? _cell.length_c 1.000 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9RTJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _exptl.absorpt_coefficient_mu _exptl.absorpt_correction_T_max _exptl.absorpt_correction_T_min _exptl.absorpt_correction_type _exptl.absorpt_process_details _exptl.entry_id _exptl.crystals_number _exptl.details _exptl.method _exptl.method_details ? ? ? ? ? 9RTJ ? ? 'SOLUTION NMR' ? ? ? ? ? ? 9RTJ ? ? 'SOLID-STATE NMR' ? # _database_PDB_matrix.entry_id 9RTJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 9RTJ _struct.title 'Hydrid structure of the helix bundle domain of pRN1 primase in complex with DNA, ATP and dGTP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9RTJ _struct_keywords.text 'primase, HBD, dinucleotide, first base-pair, REPLICATION' _struct_keywords.pdbx_keywords REPLICATION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q54324_SACIS Q54324 ? 1 ;TVVEFEELRKELVKRDSGKPVEKIKEEICTKSPPKLIKEIICENKTYADVNIDRSRGDWHVILYLMKHGVTDPDKILELL PRDSKAKENEKWNTQKYFVITLSKAWSVVKKYLEA ; 256 2 PDB 9RTJ 9RTJ ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9RTJ B 4 ? 118 ? Q54324 256 ? 370 ? 256 370 2 2 9RTJ A 1 ? 9 ? 9RTJ 1 ? 9 ? 1 9 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9RTJ GLY B 1 ? UNP Q54324 ? ? 'expression tag' 253 1 1 9RTJ HIS B 2 ? UNP Q54324 ? ? 'expression tag' 254 2 1 9RTJ MET B 3 ? UNP Q54324 ? ? 'expression tag' 255 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 9 ? ASP A 19 ? GLU B 261 ASP B 271 1 ? 11 HELX_P HELX_P2 AA2 PRO A 23 ? THR A 33 ? PRO B 275 THR B 285 1 ? 11 HELX_P HELX_P3 AA3 PRO A 37 ? CYS A 45 ? PRO B 289 CYS B 297 1 ? 9 HELX_P HELX_P4 AA4 ASP A 56 ? HIS A 71 ? ASP B 308 HIS B 323 1 ? 16 HELX_P HELX_P5 AA5 ASP A 75 ? LEU A 83 ? ASP B 327 LEU B 335 1 ? 9 HELX_P HELX_P6 AA6 ASN A 96 ? ALA A 118 ? ASN B 348 ALA B 370 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 32 SG ? ? ? 1_555 A CYS 45 SG ? ? B CYS 284 B CYS 297 1_555 ? ? ? ? ? ? ? 2.047 ? ? metalc1 metalc ? ? A ASP 56 OD1 ? ? ? 1_555 F MG . MG ? ? B ASP 308 B MG 404 1_555 ? ? ? ? ? ? ? 3.904 ? ? metalc2 metalc ? ? A ASP 56 OD2 ? ? ? 1_555 F MG . MG ? ? B ASP 308 B MG 404 1_555 ? ? ? ? ? ? ? 1.979 ? ? metalc3 metalc ? ? A GLU 91 OE2 ? ? ? 1_555 E MG . MG ? ? B GLU 343 B MG 403 1_555 ? ? ? ? ? ? ? 1.913 ? ? metalc4 metalc ? ? C DGT . O2G ? ? ? 1_555 F MG . MG ? ? B DGT 401 B MG 404 1_555 ? ? ? ? ? ? ? 1.875 ? ? metalc5 metalc ? ? C DGT . O2B ? ? ? 1_555 F MG . MG ? ? B DGT 401 B MG 404 1_555 ? ? ? ? ? ? ? 1.920 ? ? metalc6 metalc ? ? C DGT . O1A ? ? ? 1_555 F MG . MG ? ? B DGT 401 B MG 404 1_555 ? ? ? ? ? ? ? 1.933 ? ? metalc7 metalc ? ? D ATP . O1G ? ? ? 1_555 E MG . MG ? ? B ATP 402 B MG 403 1_555 ? ? ? ? ? ? ? 1.847 ? ? metalc8 metalc ? ? D ATP . O1B ? ? ? 1_555 E MG . MG ? ? B ATP 402 B MG 403 1_555 ? ? ? ? ? ? ? 1.970 ? ? metalc9 metalc ? ? D ATP . O1A ? ? ? 1_555 E MG . MG ? ? B ATP 402 B MG 403 1_555 ? ? ? ? ? ? ? 1.918 ? ? hydrog1 hydrog ? ? B DT 7 O2 ? ? ? 1_555 B DA 9 N6 ? ? A DT 7 A DA 9 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 56 ? B ASP 308 ? 1_555 MG ? F MG . ? B MG 404 ? 1_555 OD2 ? A ASP 56 ? B ASP 308 ? 1_555 23.3 ? 2 OD1 ? A ASP 56 ? B ASP 308 ? 1_555 MG ? F MG . ? B MG 404 ? 1_555 O2G ? C DGT . ? B DGT 401 ? 1_555 94.9 ? 3 OD2 ? A ASP 56 ? B ASP 308 ? 1_555 MG ? F MG . ? B MG 404 ? 1_555 O2G ? C DGT . ? B DGT 401 ? 1_555 113.9 ? 4 OD1 ? A ASP 56 ? B ASP 308 ? 1_555 MG ? F MG . ? B MG 404 ? 1_555 O2B ? C DGT . ? B DGT 401 ? 1_555 75.5 ? 5 OD2 ? A ASP 56 ? B ASP 308 ? 1_555 MG ? F MG . ? B MG 404 ? 1_555 O2B ? C DGT . ? B DGT 401 ? 1_555 88.4 ? 6 O2G ? C DGT . ? B DGT 401 ? 1_555 MG ? F MG . ? B MG 404 ? 1_555 O2B ? C DGT . ? B DGT 401 ? 1_555 92.9 ? 7 OD1 ? A ASP 56 ? B ASP 308 ? 1_555 MG ? F MG . ? B MG 404 ? 1_555 O1A ? C DGT . ? B DGT 401 ? 1_555 164.0 ? 8 OD2 ? A ASP 56 ? B ASP 308 ? 1_555 MG ? F MG . ? B MG 404 ? 1_555 O1A ? C DGT . ? B DGT 401 ? 1_555 154.5 ? 9 O2G ? C DGT . ? B DGT 401 ? 1_555 MG ? F MG . ? B MG 404 ? 1_555 O1A ? C DGT . ? B DGT 401 ? 1_555 91.6 ? 10 O2B ? C DGT . ? B DGT 401 ? 1_555 MG ? F MG . ? B MG 404 ? 1_555 O1A ? C DGT . ? B DGT 401 ? 1_555 89.6 ? 11 OE2 ? A GLU 91 ? B GLU 343 ? 1_555 MG ? E MG . ? B MG 403 ? 1_555 O1G ? D ATP . ? B ATP 402 ? 1_555 93.6 ? 12 OE2 ? A GLU 91 ? B GLU 343 ? 1_555 MG ? E MG . ? B MG 403 ? 1_555 O1B ? D ATP . ? B ATP 402 ? 1_555 163.0 ? 13 O1G ? D ATP . ? B ATP 402 ? 1_555 MG ? E MG . ? B MG 403 ? 1_555 O1B ? D ATP . ? B ATP 402 ? 1_555 86.1 ? 14 OE2 ? A GLU 91 ? B GLU 343 ? 1_555 MG ? E MG . ? B MG 403 ? 1_555 O1A ? D ATP . ? B ATP 402 ? 1_555 109.3 ? 15 O1G ? D ATP . ? B ATP 402 ? 1_555 MG ? E MG . ? B MG 403 ? 1_555 O1A ? D ATP . ? B ATP 402 ? 1_555 107.7 ? 16 O1B ? D ATP . ? B ATP 402 ? 1_555 MG ? E MG . ? B MG 403 ? 1_555 O1A ? D ATP . ? B ATP 402 ? 1_555 86.9 ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 32 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 45 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id B _pdbx_modification_feature.auth_seq_id 284 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id B _pdbx_modification_feature.modified_residue_auth_seq_id 297 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # _pdbx_entry_details.entry_id 9RTJ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.12 108.30 1.82 0.30 N 2 1 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.58 108.30 3.28 0.30 N 3 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.64 108.30 4.34 0.30 N 4 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.82 108.30 3.52 0.30 N 5 1 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.77 108.30 2.47 0.30 N 6 1 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.99 108.30 2.69 0.30 N 7 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.10 108.30 2.80 0.30 N 8 1 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 110.81 108.30 2.51 0.30 N 9 1 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.44 108.30 3.14 0.30 N 10 2 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.81 108.30 2.51 0.30 N 11 2 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.35 108.30 4.05 0.30 N 12 2 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.72 108.30 3.42 0.30 N 13 2 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.53 108.30 2.23 0.30 N 14 2 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.63 108.30 2.33 0.30 N 15 2 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.35 108.30 2.05 0.30 N 16 2 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.97 122.90 -3.93 0.60 N 17 2 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.77 108.30 3.47 0.30 N 18 2 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.80 108.30 3.50 0.30 N 19 3 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.53 108.30 2.23 0.30 N 20 3 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.58 108.30 2.28 0.30 N 21 3 C6 A DT 2 ? ? C5 A DT 2 ? ? C7 A DT 2 ? ? 119.24 122.90 -3.66 0.60 N 22 3 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.25 108.30 2.95 0.30 N 23 3 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.97 108.30 3.67 0.30 N 24 3 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.60 108.30 2.30 0.30 N 25 3 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.09 108.30 2.79 0.30 N 26 3 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.87 108.30 2.57 0.30 N 27 3 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.17 108.30 2.87 0.30 N 28 3 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.47 108.30 3.17 0.30 N 29 4 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.52 108.30 2.22 0.30 N 30 4 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.61 108.30 3.31 0.30 N 31 4 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.99 108.30 3.69 0.30 N 32 4 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.95 108.30 2.65 0.30 N 33 4 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.50 108.30 2.20 0.30 N 34 4 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.49 108.30 3.19 0.30 N 35 4 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.10 108.30 2.80 0.30 N 36 4 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.14 122.90 -3.76 0.60 N 37 4 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.20 108.30 2.90 0.30 N 38 4 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 112.29 108.30 3.99 0.30 N 39 5 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.36 108.30 2.06 0.30 N 40 5 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.51 108.30 3.21 0.30 N 41 5 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.53 108.30 4.23 0.30 N 42 5 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.73 108.30 3.43 0.30 N 43 5 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.44 108.30 2.14 0.30 N 44 5 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.91 108.30 2.61 0.30 N 45 5 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.00 108.30 2.70 0.30 N 46 5 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 112.46 108.30 4.16 0.30 N 47 5 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 112.55 108.30 4.25 0.30 N 48 6 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.11 108.30 1.81 0.30 N 49 6 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.15 108.30 1.85 0.30 N 50 6 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.03 108.30 2.73 0.30 N 51 6 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.77 108.30 3.47 0.30 N 52 6 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.28 122.90 -3.62 0.60 N 53 6 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.84 108.30 2.54 0.30 N 54 6 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.04 108.30 2.74 0.30 N 55 6 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.78 108.30 2.48 0.30 N 56 6 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.95 122.90 -3.95 0.60 N 57 6 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.77 108.30 3.47 0.30 N 58 6 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 112.18 108.30 3.88 0.30 N 59 7 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.33 108.30 2.03 0.30 N 60 7 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.59 108.30 3.29 0.30 N 61 7 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.04 108.30 3.74 0.30 N 62 7 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.70 108.30 2.40 0.30 N 63 7 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.25 122.90 -3.65 0.60 N 64 7 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.56 108.30 2.26 0.30 N 65 7 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.75 108.30 2.45 0.30 N 66 7 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.93 108.30 2.63 0.30 N 67 7 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 110.54 108.30 2.24 0.30 N 68 7 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 110.95 108.30 2.65 0.30 N 69 8 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.31 108.30 2.01 0.30 N 70 8 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.25 108.30 2.95 0.30 N 71 8 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.57 108.30 3.27 0.30 N 72 8 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.04 108.30 3.74 0.30 N 73 8 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.99 108.30 2.69 0.30 N 74 8 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.83 108.30 2.53 0.30 N 75 8 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 110.60 108.30 2.30 0.30 N 76 8 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 110.75 108.30 2.45 0.30 N 77 9 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 112.63 108.30 4.33 0.30 N 78 9 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.35 108.30 4.05 0.30 N 79 9 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.34 108.30 3.04 0.30 N 80 9 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.11 122.90 -3.79 0.60 N 81 9 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.34 108.30 3.04 0.30 N 82 9 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.29 108.30 2.99 0.30 N 83 9 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.03 122.90 -3.87 0.60 N 84 9 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 110.98 108.30 2.68 0.30 N 85 9 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 112.07 108.30 3.77 0.30 N 86 10 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.28 108.30 1.98 0.30 N 87 10 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.11 108.30 1.81 0.30 N 88 10 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.65 108.30 3.35 0.30 N 89 10 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.49 108.30 2.19 0.30 N 90 10 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.73 108.30 2.43 0.30 N 91 10 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 112.04 108.30 3.74 0.30 N 92 10 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.36 108.30 2.06 0.30 N 93 10 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.15 122.90 -3.75 0.60 N 94 10 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.02 108.30 2.72 0.30 N 95 10 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.68 108.30 3.38 0.30 N 96 11 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.49 108.30 2.19 0.30 N 97 11 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.00 108.30 2.70 0.30 N 98 11 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.82 108.30 3.52 0.30 N 99 11 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.80 108.30 2.50 0.30 N 100 11 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.71 108.30 2.41 0.30 N 101 11 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.86 108.30 2.56 0.30 N 102 11 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.06 108.30 2.76 0.30 N 103 11 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.20 122.90 -3.70 0.60 N 104 11 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.03 108.30 2.73 0.30 N 105 11 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 112.26 108.30 3.96 0.30 N 106 12 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.85 108.30 2.55 0.30 N 107 12 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.46 108.30 2.16 0.30 N 108 12 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.29 108.30 2.99 0.30 N 109 12 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.58 108.30 2.28 0.30 N 110 12 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.98 108.30 2.68 0.30 N 111 12 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.13 108.30 2.83 0.30 N 112 12 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.21 122.90 -3.69 0.60 N 113 12 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.71 108.30 3.41 0.30 N 114 12 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.29 108.30 2.99 0.30 N 115 13 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.89 108.30 2.59 0.30 N 116 13 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.06 108.30 2.76 0.30 N 117 13 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.12 108.30 3.82 0.30 N 118 13 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.85 108.30 2.55 0.30 N 119 13 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.29 122.90 -3.61 0.60 N 120 13 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.27 108.30 1.97 0.30 N 121 13 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.21 108.30 2.91 0.30 N 122 13 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.12 122.90 -3.78 0.60 N 123 13 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 110.15 108.30 1.85 0.30 N 124 13 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 112.00 108.30 3.70 0.30 N 125 14 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.37 108.30 2.07 0.30 N 126 14 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.52 108.30 3.22 0.30 N 127 14 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.63 108.30 3.33 0.30 N 128 14 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.69 108.30 2.39 0.30 N 129 14 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.79 108.30 2.49 0.30 N 130 14 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.84 108.30 2.54 0.30 N 131 14 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.93 108.30 3.63 0.30 N 132 14 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.44 108.30 3.14 0.30 N 133 15 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.29 108.30 1.99 0.30 N 134 15 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.79 108.30 3.49 0.30 N 135 15 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.15 108.30 3.85 0.30 N 136 15 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.18 108.30 2.88 0.30 N 137 15 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.52 108.30 2.22 0.30 N 138 15 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.29 108.30 1.99 0.30 N 139 15 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.31 108.30 3.01 0.30 N 140 15 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.90 122.90 -4.00 0.60 N 141 15 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.42 108.30 3.12 0.30 N 142 15 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.24 108.30 2.94 0.30 N 143 16 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.60 108.30 2.30 0.30 N 144 16 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.80 108.30 2.50 0.30 N 145 16 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.85 108.30 3.55 0.30 N 146 16 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.87 108.30 2.57 0.30 N 147 16 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.27 122.90 -3.63 0.60 N 148 16 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.59 108.30 2.29 0.30 N 149 16 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.04 108.30 2.74 0.30 N 150 16 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.04 108.30 2.74 0.30 N 151 16 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.66 108.30 3.36 0.30 N 152 16 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 110.94 108.30 2.64 0.30 N 153 17 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.52 108.30 2.22 0.30 N 154 17 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.34 108.30 3.04 0.30 N 155 17 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.19 108.30 3.89 0.30 N 156 17 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.53 108.30 2.23 0.30 N 157 17 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.93 108.30 2.63 0.30 N 158 17 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.19 108.30 2.89 0.30 N 159 17 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.11 122.90 -3.79 0.60 N 160 17 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.23 108.30 2.93 0.30 N 161 17 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.33 108.30 3.03 0.30 N 162 18 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.27 108.30 1.97 0.30 N 163 18 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.37 108.30 3.07 0.30 N 164 18 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.55 108.30 3.25 0.30 N 165 18 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.18 108.30 2.88 0.30 N 166 18 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.49 108.30 2.19 0.30 N 167 18 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.17 108.30 2.87 0.30 N 168 18 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.27 108.30 1.97 0.30 N 169 18 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.23 122.90 -3.67 0.60 N 170 18 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 110.57 108.30 2.27 0.30 N 171 18 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.21 108.30 2.91 0.30 N 172 19 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.50 108.30 2.20 0.30 N 173 19 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.80 108.30 3.50 0.30 N 174 19 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.01 108.30 3.71 0.30 N 175 19 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.55 108.30 2.25 0.30 N 176 19 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.08 108.30 2.78 0.30 N 177 19 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.97 108.30 3.67 0.30 N 178 19 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.18 108.30 1.88 0.30 N 179 19 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.80 122.90 -4.10 0.60 N 180 19 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 110.88 108.30 2.58 0.30 N 181 19 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.45 108.30 3.15 0.30 N 182 20 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.99 108.30 2.69 0.30 N 183 20 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.96 108.30 2.66 0.30 N 184 20 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.50 108.30 2.20 0.30 N 185 20 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.90 108.30 2.60 0.30 N 186 20 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.42 108.30 2.12 0.30 N 187 20 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.57 108.30 2.27 0.30 N 188 20 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.18 108.30 1.88 0.30 N 189 20 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.12 122.90 -3.78 0.60 N 190 20 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 110.54 108.30 2.24 0.30 N 191 20 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.66 108.30 3.36 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL B 257 ? ? 55.45 17.23 2 1 VAL B 258 ? ? 54.04 18.99 3 1 LYS B 286 ? ? -105.48 -153.44 4 1 SER B 287 ? ? -113.22 71.53 5 1 ASN B 306 ? ? 61.52 65.44 6 1 GLU B 343 ? ? -150.10 -22.19 7 1 ASN B 344 ? ? 31.75 95.79 8 2 THR B 256 ? ? 57.40 70.79 9 2 LYS B 286 ? ? -111.12 -153.83 10 2 SER B 287 ? ? -115.92 69.65 11 2 ASN B 306 ? ? 60.95 64.74 12 2 VAL B 325 ? ? -104.21 59.83 13 2 GLU B 343 ? ? -149.48 -19.90 14 2 ASN B 344 ? ? 29.55 95.80 15 3 VAL B 257 ? ? 55.27 15.92 16 3 VAL B 258 ? ? 53.68 18.26 17 3 LYS B 286 ? ? -104.96 -152.33 18 3 SER B 287 ? ? -116.07 67.79 19 3 ASN B 306 ? ? 62.76 62.85 20 3 GLU B 343 ? ? -150.41 -20.39 21 3 ASN B 344 ? ? 31.31 99.69 22 4 THR B 256 ? ? 57.96 76.09 23 4 LYS B 286 ? ? -108.77 -154.83 24 4 SER B 287 ? ? -115.63 67.78 25 4 ASN B 306 ? ? 62.03 63.23 26 4 GLU B 343 ? ? -150.08 -19.79 27 4 ASN B 344 ? ? 28.36 99.63 28 5 LYS B 286 ? ? -112.60 -155.54 29 5 SER B 287 ? ? -115.69 69.72 30 5 ASN B 306 ? ? 61.94 63.56 31 5 GLU B 343 ? ? -153.54 -8.86 32 5 ASN B 344 ? ? 29.05 113.09 33 6 MET B 255 ? ? 53.91 -172.44 34 6 VAL B 257 ? ? 55.95 15.91 35 6 LYS B 286 ? ? -109.19 -152.81 36 6 SER B 287 ? ? -115.98 68.02 37 6 ASN B 306 ? ? 62.13 61.25 38 6 GLU B 343 ? ? -152.49 -5.71 39 6 ASN B 344 ? ? 26.91 103.62 40 7 LYS B 286 ? ? -103.05 -151.20 41 7 SER B 287 ? ? -113.33 68.94 42 7 ASN B 306 ? ? 62.14 64.32 43 7 GLU B 343 ? ? -149.81 -24.37 44 7 ASN B 344 ? ? 35.34 95.76 45 8 VAL B 258 ? ? 55.89 17.33 46 8 LYS B 286 ? ? -111.47 -152.41 47 8 SER B 287 ? ? -116.00 67.70 48 8 ASN B 306 ? ? 61.63 63.23 49 8 GLU B 343 ? ? -149.92 -17.05 50 8 ASN B 344 ? ? 28.63 101.67 51 9 THR B 256 ? ? 57.47 82.28 52 9 LYS B 286 ? ? -107.11 -153.44 53 9 SER B 287 ? ? -115.59 67.93 54 9 ASN B 306 ? ? 61.57 64.85 55 9 GLU B 343 ? ? -149.50 -26.00 56 9 ASN B 344 ? ? 39.62 98.68 57 10 THR B 256 ? ? 56.34 71.33 58 10 VAL B 257 ? ? 54.47 19.37 59 10 LYS B 286 ? ? -105.45 -153.76 60 10 SER B 287 ? ? -115.21 68.15 61 10 ASN B 306 ? ? 62.26 63.69 62 10 GLU B 343 ? ? -153.67 -6.90 63 10 ASN B 344 ? ? 28.62 113.96 64 11 MET B 255 ? ? -158.45 -13.38 65 11 LYS B 286 ? ? -112.56 -154.80 66 11 SER B 287 ? ? -115.91 67.81 67 11 ASN B 306 ? ? 62.86 64.01 68 11 GLU B 343 ? ? -153.75 -4.57 69 11 ASN B 344 ? ? 23.77 113.15 70 12 VAL B 257 ? ? 55.04 17.13 71 12 VAL B 258 ? ? 53.75 19.17 72 12 LYS B 286 ? ? -109.24 -150.95 73 12 SER B 287 ? ? -115.64 68.18 74 12 ASN B 306 ? ? 62.45 61.24 75 12 GLU B 343 ? ? -149.97 -16.88 76 12 ASN B 344 ? ? 25.91 101.96 77 13 VAL B 257 ? ? 53.07 15.43 78 13 LYS B 286 ? ? -113.60 -153.24 79 13 SER B 287 ? ? -116.06 67.78 80 13 ASN B 306 ? ? 60.24 67.33 81 13 GLU B 343 ? ? -149.52 -25.00 82 13 ASN B 344 ? ? 34.06 99.08 83 14 LYS B 286 ? ? -112.94 -153.13 84 14 SER B 287 ? ? -116.11 69.91 85 14 ASN B 306 ? ? 62.84 60.60 86 14 GLU B 343 ? ? -152.72 -6.94 87 14 ASN B 344 ? ? 30.84 102.40 88 15 THR B 256 ? ? 58.28 73.56 89 15 LYS B 286 ? ? -107.26 -151.51 90 15 SER B 287 ? ? -115.93 67.83 91 15 ASN B 306 ? ? 61.82 63.80 92 15 GLU B 343 ? ? -152.04 -6.84 93 15 ASN B 344 ? ? 28.92 99.36 94 16 LYS B 286 ? ? -114.34 -150.85 95 16 SER B 287 ? ? -115.94 67.63 96 16 ASN B 306 ? ? 60.94 63.60 97 16 SER B 339 ? ? -73.29 -146.78 98 16 LYS B 340 ? ? -153.14 18.16 99 16 GLU B 343 ? ? -150.45 -20.44 100 16 ASN B 344 ? ? 31.70 95.93 101 17 VAL B 257 ? ? 50.84 19.02 102 17 LYS B 286 ? ? -105.72 -154.03 103 17 SER B 287 ? ? -115.96 67.78 104 17 ASN B 306 ? ? 61.08 66.59 105 17 SER B 339 ? ? -71.83 -158.32 106 17 GLU B 343 ? ? -151.60 -19.76 107 17 ASN B 344 ? ? 29.87 95.71 108 18 VAL B 258 ? ? 55.85 17.17 109 18 LYS B 286 ? ? -110.25 -151.46 110 18 SER B 287 ? ? -115.37 68.23 111 18 ASN B 306 ? ? 61.67 63.14 112 18 GLU B 343 ? ? -149.19 -21.71 113 18 ASN B 344 ? ? 32.09 97.14 114 19 MET B 255 ? ? -156.26 -10.49 115 19 LYS B 286 ? ? -104.31 -151.70 116 19 SER B 287 ? ? -116.17 68.17 117 19 ASN B 306 ? ? 63.36 62.94 118 19 SER B 339 ? ? -72.08 -151.37 119 19 LYS B 340 ? ? -150.66 14.97 120 19 GLU B 343 ? ? -151.85 -24.88 121 19 ASN B 344 ? ? 32.16 96.67 122 20 VAL B 258 ? ? 55.14 19.40 123 20 LYS B 286 ? ? -110.28 -155.20 124 20 SER B 287 ? ? -116.07 68.79 125 20 ASN B 306 ? ? 61.09 62.41 126 20 GLU B 343 ? ? -148.62 -33.52 127 20 ASN B 344 ? ? 39.60 102.45 # _pdbx_nmr_ensemble.entry_id 9RTJ _pdbx_nmr_ensemble.conformers_calculated_total_number 500 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 9RTJ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '0.96 mM DNA, 0.8 mM [U-99% 13C; U-99% 15N] HBD, 2.4 mM AppCp, 2.4 mM dGppCp, 10 mM Mg2+, 90% H2O/10% D2O' '90% H2O/10% D2O' Sample_1 solution '0.8 mM 13C,15N-labeled HBD, 0.96 mM DNA, 2.4 mM AppCp, 2.4 mM dGppCp, 10 mM MgCl2, 90% H2O/10% D2O' 2 '1 mM DNA, 1 mM [U-99% 13C; U-99% 15N] HBD, 1.2 mM AppCp, 1.2 mM dGppCp, 10 mM Mg2+, 100% D2O' '100% D2O' Sample_2 solution '1 mM 13C, 15N-labeled HBD, 1 mM DNA, 1.2 mM AppCp, 1.2 mM dGppCp, 10 mM MgCl2, 100% D2O' 3 '10.8 mM DNA, 0.8 mM [U-99% 13C; U-99% 15N] HBD, 1.6 mM AppCp, 1.6 mM dGppCp, 10 mM Mg2+, 100% D2O' '100% D2O' Sample_3 solution '0.8 mM 13C, 15N-labeled HBD, 0.8 mM DNA, 1.6 mM AppCp, 1.6 mM dGppCp, 10 mM MgCl2, 100% D2O' 4 '1.1 mM DNA, 1 mM [U-99% 13C; U-99% 15N] HBD, 1.2 mM AppCp, 1.2 mM dGppCp, 10 mM Mg2+, 90% H2O/10% D2O' '90% H2O/10% D2O' Sample_4 solution '1 mM 13C, 15N-labled HBD, 1.1 mM DNA, 1.2 mM AppCp, 1.2 mM dGppCp, 10 mM MgCl2, 90% H2O/10% D2O' 5 '1 mM DNA, 1 mM HBD, 2 mM AppCp, 2 mM dGppCp, 10 mM Mg2+, 90% H2O/10% D2O' '90% H2O/10% D2O' Sample_5 solution '1 mM unlabeled HBD, 1 mM DNA, 2 mM AppCp, 2 mM dGppCp, 10 mM MgCl2, 90% H2O/10% D2O' 6 '1 mM DNA, 1 mM HBD, 1.2 mM AppCp, 1.2 mM dGppCp, 10 mM Mg2+, 100% D2O' '100% D2O' Sample_6 solution '1 mM unlabeled HBD, 1 mM DNA, 1.2 mM AppCp, 1.2 mM dGppCp, 10 mM MgCl2, 100% D2O' 7 '0.254 mM DNA, 0.231 mM [U-100% 15N; U-80% 2H] pRN1 primase H145A, 0.924 mM AppNHp, 0.924 mM dGppCp, 10 mM Mg2+, 90% H2O/10% D2O' '90% H2O/10% D2O' Sample_7 solid '1 mg of 2H,15N-labeled pRN1(H145A) complexed with DNA and AppNHp and dGppCp' 8 '4 mM DNA, 4 mM HBD, 4 mM AppCp, 4 mM dGppCp, 10 mM Mg2+, 90% H2O/10% D2O' '90% H2O/10% D2O' Sample_8 solution '4 mM unlabeled HBD, 4 mM DNA, 4 mM AppCp, 4 mM dGppCp, 10 mM MgCl2, 90% H2O/10% D2O' 9 '2.5 mM DNA, 2.3 mM [U-100% 13C; U-100% 15N] pRN1 primase H145A, 4.6 mM AppCp, 4.6 mM dGppCp, 10 mM Mg2+, 90% H2O/10% D2O' '90% H2O/10% D2O' Sample_9 solid '30 mg 13C,15N-labeled pRN1(H145A) complexed with DNA and AppNHp and dGppCp' 10 '0.254 mM DNA, 0.231 mM [U-15N; U-2H] pRN1 primase, 0.924 mM AppNHp, 0.924 mM dGppCp, 10 mM Mg2+, 90% H2O/10% D2O' '90% H2O/10% D2O' Sample_10 solid '1 mg of 2H,15N-labeled pRN1 complexed with DNA and AppNHp and dGppCp' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 DNA 0.96 ? mM 'natural abundance' 1 HBD 0.8 ? mM '[U-99% 13C; U-99% 15N]' 1 AppCp 2.4 ? mM 'natural abundance' 1 dGppCp 2.4 ? mM 'natural abundance' 1 Mg2+ 10 ? mM 'natural abundance' 2 DNA 1 ? mM 'natural abundance' 2 HBD 1 ? mM '[U-99% 13C; U-99% 15N]' 2 AppCp 1.2 ? mM 'natural abundance' 2 dGppCp 1.2 ? mM 'natural abundance' 2 Mg2+ 10 ? mM 'natural abundance' 3 DNA 10.8 ? mM 'natural abundance' 3 HBD 0.8 ? mM '[U-99% 13C; U-99% 15N]' 3 AppCp 1.6 ? mM 'natural abundance' 3 dGppCp 1.6 ? mM 'natural abundance' 3 Mg2+ 10 ? mM 'natural abundance' 4 DNA 1.1 ? mM 'natural abundance' 4 HBD 1 ? mM '[U-99% 13C; U-99% 15N]' 4 AppCp 1.2 ? mM 'natural abundance' 4 dGppCp 1.2 ? mM 'natural abundance' 4 Mg2+ 10 ? mM 'natural abundance' 5 DNA 1 ? mM 'natural abundance' 5 HBD 1 ? mM 'natural abundance' 5 AppCp 2 ? mM 'natural abundance' 5 dGppCp 2 ? mM 'natural abundance' 5 Mg2+ 10 ? mM 'natural abundance' 6 DNA 1 ? mM 'natural abundance' 6 HBD 1 ? mM 'natural abundance' 6 AppCp 1.2 ? mM 'natural abundance' 6 dGppCp 1.2 ? mM 'natural abundance' 6 Mg2+ 10 ? mM 'natural abundance' 7 DNA 0.254 ? mM 'natural abundance' 7 'pRN1 primase H145A' 0.231 ? mM '[U-100% 15N; U-80% 2H]' 7 AppNHp 0.924 ? mM 'natural abundance' 7 dGppCp 0.924 ? mM 'natural abundance' 7 Mg2+ 10 ? mM 'natural abundance' 8 DNA 4 ? mM 'natural abundance' 8 HBD 4 ? mM 'natural abundance' 8 AppCp 4 ? mM 'natural abundance' 8 dGppCp 4 ? mM 'natural abundance' 8 Mg2+ 10 ? mM 'natural abundance' 9 DNA 2.5 ? mM 'natural abundance' 9 'pRN1 primase H145A' 2.3 ? mM '[U-100% 13C; U-100% 15N]' 9 AppCp 4.6 ? mM 'natural abundance' 9 dGppCp 4.6 ? mM 'natural abundance' 9 Mg2+ 10 ? mM 'natural abundance' 10 DNA 0.254 ? mM 'natural abundance' 10 'pRN1 primase' 0.231 ? mM '[U-15N; U-2H]' 10 AppNHp 0.924 ? mM 'natural abundance' 10 dGppCp 0.924 ? mM 'natural abundance' 10 Mg2+ 10 ? mM 'natural abundance' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 298 atm 1 7.0 100 ? ? mM Condition_1 ? pH ? ? K 2 298 atm 1 7.0 75 ? ? mM Condition_2 ? pH ? ? K 3 298 atm 1 7.0 50 ? ? mM Condition_3 ? pH ? ? K 4 298 atm 1 7.0 120 ? ? mM Condition_4 ? pH ? ? K 5 278 atm 1 7.0 50 ? ? mM Condition_5 ? pH ? ? K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '3D HNCA' 1 isotropic 2 1 1 '3D HN(CA)CO' 2 isotropic 3 1 1 '3D HN(CO)CA' 2 isotropic 4 1 1 '3D HNCACB' 2 isotropic 5 1 1 '3D CBCA(CO)NH' 1 isotropic 6 1 1 '3D HNCO' 2 isotropic 7 1 1 '3D C(CO)NH' 2 isotropic 8 1 1 '3D H(CCO)NH' 2 isotropic 9 1 1 '3D 1H-15N NOESY' 1 isotropic 10 2 4 '3D 1H-13C NOESY aliphatic' 1 isotropic 11 1 3 '3D 1H-13C NOESY aliphatic' 1 isotropic 12 1 3 '3D 1H-13C NOESY aromatic' 1 isotropic 13 2 4 '3D 1H-13C NOESY aromatic' 1 isotropic 14 1 3 '2D 1H-13C HSQC aromatic' 1 isotropic 15 1 3 '2D 1H-13C HSQC aliphatic' 1 isotropic 16 2 2 2D-F1fF2f-NOESY 1 isotropic 17 2 2 2D-F2f-NOESY 1 isotropic 18 1 3 3D-13C-aliphatic-HfilteredHedited-NOESY 1 isotropic 19 1 3 3D-13C-aromatic-HfilteredHedited-NOESY 1 isotropic 20 2 5 2D-imino-NOESY 1 isotropic 21 4 8 2D-natural-abundance-Nhsqc 3 isotropic 22 2 6 2D-natural-abundance-Chsqc-aliphatic 2 isotropic 23 2 6 2D-natural-abundance-Chsqc-aromatic 2 isotropic 24 1 1 '2D 1H-15N HSQC' 1 isotropic 25 1 3 '2D 1H-15N HSQC' 1 isotropic 26 5 9 CHHP 4 isotropic 27 5 9 NHHP 4 isotropic 28 5 7 hPH 5 isotropic 29 5 10 hPH 5 isotropic # loop_ _pdbx_nmr_refine.entry_id _pdbx_nmr_refine.method _pdbx_nmr_refine.details _pdbx_nmr_refine.software_ordinal 9RTJ 'torsion angle dynamics' ? 1 9RTJ 'molecular dynamics' ? 4 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'structure calculation' CYANA 3.98.15 'Guntert, Mumenthaler and Wuthrich' 2 'data analysis' NMRFAM-SPARKY 1.470 Goddard 3 'peak picking' CANDID ? 'Herrmann, Guntert and Wuthrich' 4 refinement Amber 20 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 5 collection TopSpin 4.0.7 'Bruker Biospin' 6 processing TopSpin 4.0.7 'Bruker Biospin' 7 'chemical shift assignment' NMRFAM-SPARKY 1.470 Goddard # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 ATP PG P N N 74 ATP O1G O N N 75 ATP O2G O N N 76 ATP O3G O N N 77 ATP PB P N R 78 ATP O1B O N N 79 ATP O2B O N N 80 ATP O3B O N N 81 ATP PA P N R 82 ATP O1A O N N 83 ATP O2A O N N 84 ATP O3A O N N 85 ATP "O5'" O N N 86 ATP "C5'" C N N 87 ATP "C4'" C N R 88 ATP "O4'" O N N 89 ATP "C3'" C N S 90 ATP "O3'" O N N 91 ATP "C2'" C N R 92 ATP "O2'" O N N 93 ATP "C1'" C N R 94 ATP N9 N Y N 95 ATP C8 C Y N 96 ATP N7 N Y N 97 ATP C5 C Y N 98 ATP C6 C Y N 99 ATP N6 N N N 100 ATP N1 N Y N 101 ATP C2 C Y N 102 ATP N3 N Y N 103 ATP C4 C Y N 104 ATP HOG2 H N N 105 ATP HOG3 H N N 106 ATP HOB2 H N N 107 ATP HOA2 H N N 108 ATP "H5'1" H N N 109 ATP "H5'2" H N N 110 ATP "H4'" H N N 111 ATP "H3'" H N N 112 ATP "HO3'" H N N 113 ATP "H2'" H N N 114 ATP "HO2'" H N N 115 ATP "H1'" H N N 116 ATP H8 H N N 117 ATP HN61 H N N 118 ATP HN62 H N N 119 ATP H2 H N N 120 CYS N N N N 121 CYS CA C N R 122 CYS C C N N 123 CYS O O N N 124 CYS CB C N N 125 CYS SG S N N 126 CYS OXT O N N 127 CYS H H N N 128 CYS H2 H N N 129 CYS HA H N N 130 CYS HB2 H N N 131 CYS HB3 H N N 132 CYS HG H N N 133 CYS HXT H N N 134 DA OP3 O N N 135 DA P P N N 136 DA OP1 O N N 137 DA OP2 O N N 138 DA "O5'" O N N 139 DA "C5'" C N N 140 DA "C4'" C N R 141 DA "O4'" O N N 142 DA "C3'" C N S 143 DA "O3'" O N N 144 DA "C2'" C N N 145 DA "C1'" C N R 146 DA N9 N Y N 147 DA C8 C Y N 148 DA N7 N Y N 149 DA C5 C Y N 150 DA C6 C Y N 151 DA N6 N N N 152 DA N1 N Y N 153 DA C2 C Y N 154 DA N3 N Y N 155 DA C4 C Y N 156 DA HOP3 H N N 157 DA HOP2 H N N 158 DA "H5'" H N N 159 DA "H5''" H N N 160 DA "H4'" H N N 161 DA "H3'" H N N 162 DA "HO3'" H N N 163 DA "H2'" H N N 164 DA "H2''" H N N 165 DA "H1'" H N N 166 DA H8 H N N 167 DA H61 H N N 168 DA H62 H N N 169 DA H2 H N N 170 DC OP3 O N N 171 DC P P N N 172 DC OP1 O N N 173 DC OP2 O N N 174 DC "O5'" O N N 175 DC "C5'" C N N 176 DC "C4'" C N R 177 DC "O4'" O N N 178 DC "C3'" C N S 179 DC "O3'" O N N 180 DC "C2'" C N N 181 DC "C1'" C N R 182 DC N1 N N N 183 DC C2 C N N 184 DC O2 O N N 185 DC N3 N N N 186 DC C4 C N N 187 DC N4 N N N 188 DC C5 C N N 189 DC C6 C N N 190 DC HOP3 H N N 191 DC HOP2 H N N 192 DC "H5'" H N N 193 DC "H5''" H N N 194 DC "H4'" H N N 195 DC "H3'" H N N 196 DC "HO3'" H N N 197 DC "H2'" H N N 198 DC "H2''" H N N 199 DC "H1'" H N N 200 DC H41 H N N 201 DC H42 H N N 202 DC H5 H N N 203 DC H6 H N N 204 DG OP3 O N N 205 DG P P N N 206 DG OP1 O N N 207 DG OP2 O N N 208 DG "O5'" O N N 209 DG "C5'" C N N 210 DG "C4'" C N R 211 DG "O4'" O N N 212 DG "C3'" C N S 213 DG "O3'" O N N 214 DG "C2'" C N N 215 DG "C1'" C N R 216 DG N9 N Y N 217 DG C8 C Y N 218 DG N7 N Y N 219 DG C5 C Y N 220 DG C6 C N N 221 DG O6 O N N 222 DG N1 N N N 223 DG C2 C N N 224 DG N2 N N N 225 DG N3 N N N 226 DG C4 C Y N 227 DG HOP3 H N N 228 DG HOP2 H N N 229 DG "H5'" H N N 230 DG "H5''" H N N 231 DG "H4'" H N N 232 DG "H3'" H N N 233 DG "HO3'" H N N 234 DG "H2'" H N N 235 DG "H2''" H N N 236 DG "H1'" H N N 237 DG H8 H N N 238 DG H1 H N N 239 DG H21 H N N 240 DG H22 H N N 241 DGT PG P N N 242 DGT O1G O N N 243 DGT O2G O N N 244 DGT O3G O N N 245 DGT O3B O N N 246 DGT PB P N S 247 DGT O1B O N N 248 DGT O2B O N N 249 DGT O3A O N N 250 DGT PA P N R 251 DGT O1A O N N 252 DGT O2A O N N 253 DGT "O5'" O N N 254 DGT "C5'" C N N 255 DGT "C4'" C N R 256 DGT "O4'" O N N 257 DGT "C3'" C N S 258 DGT "O3'" O N N 259 DGT "C2'" C N N 260 DGT "C1'" C N R 261 DGT N9 N Y N 262 DGT C8 C Y N 263 DGT N7 N Y N 264 DGT C5 C Y N 265 DGT C6 C N N 266 DGT O6 O N N 267 DGT N1 N N N 268 DGT C2 C N N 269 DGT N2 N N N 270 DGT N3 N N N 271 DGT C4 C Y N 272 DGT HO1G H N N 273 DGT HO2G H N N 274 DGT HO1B H N N 275 DGT HO1A H N N 276 DGT "H5'" H N N 277 DGT "H5'A" H N N 278 DGT "H4'" H N N 279 DGT "H3'" H N N 280 DGT "HO3'" H N N 281 DGT "H2'" H N N 282 DGT "H2'A" H N N 283 DGT "H1'" H N N 284 DGT H8 H N N 285 DGT HN2 H N N 286 DGT HN2A H N N 287 DGT H16 H N N 288 DT OP3 O N N 289 DT P P N N 290 DT OP1 O N N 291 DT OP2 O N N 292 DT "O5'" O N N 293 DT "C5'" C N N 294 DT "C4'" C N R 295 DT "O4'" O N N 296 DT "C3'" C N S 297 DT "O3'" O N N 298 DT "C2'" C N N 299 DT "C1'" C N R 300 DT N1 N N N 301 DT C2 C N N 302 DT O2 O N N 303 DT N3 N N N 304 DT C4 C N N 305 DT O4 O N N 306 DT C5 C N N 307 DT C7 C N N 308 DT C6 C N N 309 DT HOP3 H N N 310 DT HOP2 H N N 311 DT "H5'" H N N 312 DT "H5''" H N N 313 DT "H4'" H N N 314 DT "H3'" H N N 315 DT "HO3'" H N N 316 DT "H2'" H N N 317 DT "H2''" H N N 318 DT "H1'" H N N 319 DT H3 H N N 320 DT H71 H N N 321 DT H72 H N N 322 DT H73 H N N 323 DT H6 H N N 324 GLN N N N N 325 GLN CA C N S 326 GLN C C N N 327 GLN O O N N 328 GLN CB C N N 329 GLN CG C N N 330 GLN CD C N N 331 GLN OE1 O N N 332 GLN NE2 N N N 333 GLN OXT O N N 334 GLN H H N N 335 GLN H2 H N N 336 GLN HA H N N 337 GLN HB2 H N N 338 GLN HB3 H N N 339 GLN HG2 H N N 340 GLN HG3 H N N 341 GLN HE21 H N N 342 GLN HE22 H N N 343 GLN HXT H N N 344 GLU N N N N 345 GLU CA C N S 346 GLU C C N N 347 GLU O O N N 348 GLU CB C N N 349 GLU CG C N N 350 GLU CD C N N 351 GLU OE1 O N N 352 GLU OE2 O N N 353 GLU OXT O N N 354 GLU H H N N 355 GLU H2 H N N 356 GLU HA H N N 357 GLU HB2 H N N 358 GLU HB3 H N N 359 GLU HG2 H N N 360 GLU HG3 H N N 361 GLU HE2 H N N 362 GLU HXT H N N 363 GLY N N N N 364 GLY CA C N N 365 GLY C C N N 366 GLY O O N N 367 GLY OXT O N N 368 GLY H H N N 369 GLY H2 H N N 370 GLY HA2 H N N 371 GLY HA3 H N N 372 GLY HXT H N N 373 HIS N N N N 374 HIS CA C N S 375 HIS C C N N 376 HIS O O N N 377 HIS CB C N N 378 HIS CG C Y N 379 HIS ND1 N Y N 380 HIS CD2 C Y N 381 HIS CE1 C Y N 382 HIS NE2 N Y N 383 HIS OXT O N N 384 HIS H H N N 385 HIS H2 H N N 386 HIS HA H N N 387 HIS HB2 H N N 388 HIS HB3 H N N 389 HIS HD1 H N N 390 HIS HD2 H N N 391 HIS HE1 H N N 392 HIS HE2 H N N 393 HIS HXT H N N 394 ILE N N N N 395 ILE CA C N S 396 ILE C C N N 397 ILE O O N N 398 ILE CB C N S 399 ILE CG1 C N N 400 ILE CG2 C N N 401 ILE CD1 C N N 402 ILE OXT O N N 403 ILE H H N N 404 ILE H2 H N N 405 ILE HA H N N 406 ILE HB H N N 407 ILE HG12 H N N 408 ILE HG13 H N N 409 ILE HG21 H N N 410 ILE HG22 H N N 411 ILE HG23 H N N 412 ILE HD11 H N N 413 ILE HD12 H N N 414 ILE HD13 H N N 415 ILE HXT H N N 416 LEU N N N N 417 LEU CA C N S 418 LEU C C N N 419 LEU O O N N 420 LEU CB C N N 421 LEU CG C N N 422 LEU CD1 C N N 423 LEU CD2 C N N 424 LEU OXT O N N 425 LEU H H N N 426 LEU H2 H N N 427 LEU HA H N N 428 LEU HB2 H N N 429 LEU HB3 H N N 430 LEU HG H N N 431 LEU HD11 H N N 432 LEU HD12 H N N 433 LEU HD13 H N N 434 LEU HD21 H N N 435 LEU HD22 H N N 436 LEU HD23 H N N 437 LEU HXT H N N 438 LYS N N N N 439 LYS CA C N S 440 LYS C C N N 441 LYS O O N N 442 LYS CB C N N 443 LYS CG C N N 444 LYS CD C N N 445 LYS CE C N N 446 LYS NZ N N N 447 LYS OXT O N N 448 LYS H H N N 449 LYS H2 H N N 450 LYS HA H N N 451 LYS HB2 H N N 452 LYS HB3 H N N 453 LYS HG2 H N N 454 LYS HG3 H N N 455 LYS HD2 H N N 456 LYS HD3 H N N 457 LYS HE2 H N N 458 LYS HE3 H N N 459 LYS HZ1 H N N 460 LYS HZ2 H N N 461 LYS HZ3 H N N 462 LYS HXT H N N 463 MET N N N N 464 MET CA C N S 465 MET C C N N 466 MET O O N N 467 MET CB C N N 468 MET CG C N N 469 MET SD S N N 470 MET CE C N N 471 MET OXT O N N 472 MET H H N N 473 MET H2 H N N 474 MET HA H N N 475 MET HB2 H N N 476 MET HB3 H N N 477 MET HG2 H N N 478 MET HG3 H N N 479 MET HE1 H N N 480 MET HE2 H N N 481 MET HE3 H N N 482 MET HXT H N N 483 MG MG MG N N 484 PHE N N N N 485 PHE CA C N S 486 PHE C C N N 487 PHE O O N N 488 PHE CB C N N 489 PHE CG C Y N 490 PHE CD1 C Y N 491 PHE CD2 C Y N 492 PHE CE1 C Y N 493 PHE CE2 C Y N 494 PHE CZ C Y N 495 PHE OXT O N N 496 PHE H H N N 497 PHE H2 H N N 498 PHE HA H N N 499 PHE HB2 H N N 500 PHE HB3 H N N 501 PHE HD1 H N N 502 PHE HD2 H N N 503 PHE HE1 H N N 504 PHE HE2 H N N 505 PHE HZ H N N 506 PHE HXT H N N 507 PRO N N N N 508 PRO CA C N S 509 PRO C C N N 510 PRO O O N N 511 PRO CB C N N 512 PRO CG C N N 513 PRO CD C N N 514 PRO OXT O N N 515 PRO H H N N 516 PRO HA H N N 517 PRO HB2 H N N 518 PRO HB3 H N N 519 PRO HG2 H N N 520 PRO HG3 H N N 521 PRO HD2 H N N 522 PRO HD3 H N N 523 PRO HXT H N N 524 SER N N N N 525 SER CA C N S 526 SER C C N N 527 SER O O N N 528 SER CB C N N 529 SER OG O N N 530 SER OXT O N N 531 SER H H N N 532 SER H2 H N N 533 SER HA H N N 534 SER HB2 H N N 535 SER HB3 H N N 536 SER HG H N N 537 SER HXT H N N 538 THR N N N N 539 THR CA C N S 540 THR C C N N 541 THR O O N N 542 THR CB C N R 543 THR OG1 O N N 544 THR CG2 C N N 545 THR OXT O N N 546 THR H H N N 547 THR H2 H N N 548 THR HA H N N 549 THR HB H N N 550 THR HG1 H N N 551 THR HG21 H N N 552 THR HG22 H N N 553 THR HG23 H N N 554 THR HXT H N N 555 TRP N N N N 556 TRP CA C N S 557 TRP C C N N 558 TRP O O N N 559 TRP CB C N N 560 TRP CG C Y N 561 TRP CD1 C Y N 562 TRP CD2 C Y N 563 TRP NE1 N Y N 564 TRP CE2 C Y N 565 TRP CE3 C Y N 566 TRP CZ2 C Y N 567 TRP CZ3 C Y N 568 TRP CH2 C Y N 569 TRP OXT O N N 570 TRP H H N N 571 TRP H2 H N N 572 TRP HA H N N 573 TRP HB2 H N N 574 TRP HB3 H N N 575 TRP HD1 H N N 576 TRP HE1 H N N 577 TRP HE3 H N N 578 TRP HZ2 H N N 579 TRP HZ3 H N N 580 TRP HH2 H N N 581 TRP HXT H N N 582 TYR N N N N 583 TYR CA C N S 584 TYR C C N N 585 TYR O O N N 586 TYR CB C N N 587 TYR CG C Y N 588 TYR CD1 C Y N 589 TYR CD2 C Y N 590 TYR CE1 C Y N 591 TYR CE2 C Y N 592 TYR CZ C Y N 593 TYR OH O N N 594 TYR OXT O N N 595 TYR H H N N 596 TYR H2 H N N 597 TYR HA H N N 598 TYR HB2 H N N 599 TYR HB3 H N N 600 TYR HD1 H N N 601 TYR HD2 H N N 602 TYR HE1 H N N 603 TYR HE2 H N N 604 TYR HH H N N 605 TYR HXT H N N 606 VAL N N N N 607 VAL CA C N S 608 VAL C C N N 609 VAL O O N N 610 VAL CB C N N 611 VAL CG1 C N N 612 VAL CG2 C N N 613 VAL OXT O N N 614 VAL H H N N 615 VAL H2 H N N 616 VAL HA H N N 617 VAL HB H N N 618 VAL HG11 H N N 619 VAL HG12 H N N 620 VAL HG13 H N N 621 VAL HG21 H N N 622 VAL HG22 H N N 623 VAL HG23 H N N 624 VAL HXT H N N 625 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 ATP PG O1G doub N N 70 ATP PG O2G sing N N 71 ATP PG O3G sing N N 72 ATP PG O3B sing N N 73 ATP O2G HOG2 sing N N 74 ATP O3G HOG3 sing N N 75 ATP PB O1B doub N N 76 ATP PB O2B sing N N 77 ATP PB O3B sing N N 78 ATP PB O3A sing N N 79 ATP O2B HOB2 sing N N 80 ATP PA O1A doub N N 81 ATP PA O2A sing N N 82 ATP PA O3A sing N N 83 ATP PA "O5'" sing N N 84 ATP O2A HOA2 sing N N 85 ATP "O5'" "C5'" sing N N 86 ATP "C5'" "C4'" sing N N 87 ATP "C5'" "H5'1" sing N N 88 ATP "C5'" "H5'2" sing N N 89 ATP "C4'" "O4'" sing N N 90 ATP "C4'" "C3'" sing N N 91 ATP "C4'" "H4'" sing N N 92 ATP "O4'" "C1'" sing N N 93 ATP "C3'" "O3'" sing N N 94 ATP "C3'" "C2'" sing N N 95 ATP "C3'" "H3'" sing N N 96 ATP "O3'" "HO3'" sing N N 97 ATP "C2'" "O2'" sing N N 98 ATP "C2'" "C1'" sing N N 99 ATP "C2'" "H2'" sing N N 100 ATP "O2'" "HO2'" sing N N 101 ATP "C1'" N9 sing N N 102 ATP "C1'" "H1'" sing N N 103 ATP N9 C8 sing Y N 104 ATP N9 C4 sing Y N 105 ATP C8 N7 doub Y N 106 ATP C8 H8 sing N N 107 ATP N7 C5 sing Y N 108 ATP C5 C6 sing Y N 109 ATP C5 C4 doub Y N 110 ATP C6 N6 sing N N 111 ATP C6 N1 doub Y N 112 ATP N6 HN61 sing N N 113 ATP N6 HN62 sing N N 114 ATP N1 C2 sing Y N 115 ATP C2 N3 doub Y N 116 ATP C2 H2 sing N N 117 ATP N3 C4 sing Y N 118 CYS N CA sing N N 119 CYS N H sing N N 120 CYS N H2 sing N N 121 CYS CA C sing N N 122 CYS CA CB sing N N 123 CYS CA HA sing N N 124 CYS C O doub N N 125 CYS C OXT sing N N 126 CYS CB SG sing N N 127 CYS CB HB2 sing N N 128 CYS CB HB3 sing N N 129 CYS SG HG sing N N 130 CYS OXT HXT sing N N 131 DA OP3 P sing N N 132 DA OP3 HOP3 sing N N 133 DA P OP1 doub N N 134 DA P OP2 sing N N 135 DA P "O5'" sing N N 136 DA OP2 HOP2 sing N N 137 DA "O5'" "C5'" sing N N 138 DA "C5'" "C4'" sing N N 139 DA "C5'" "H5'" sing N N 140 DA "C5'" "H5''" sing N N 141 DA "C4'" "O4'" sing N N 142 DA "C4'" "C3'" sing N N 143 DA "C4'" "H4'" sing N N 144 DA "O4'" "C1'" sing N N 145 DA "C3'" "O3'" sing N N 146 DA "C3'" "C2'" sing N N 147 DA "C3'" "H3'" sing N N 148 DA "O3'" "HO3'" sing N N 149 DA "C2'" "C1'" sing N N 150 DA "C2'" "H2'" sing N N 151 DA "C2'" "H2''" sing N N 152 DA "C1'" N9 sing N N 153 DA "C1'" "H1'" sing N N 154 DA N9 C8 sing Y N 155 DA N9 C4 sing Y N 156 DA C8 N7 doub Y N 157 DA C8 H8 sing N N 158 DA N7 C5 sing Y N 159 DA C5 C6 sing Y N 160 DA C5 C4 doub Y N 161 DA C6 N6 sing N N 162 DA C6 N1 doub Y N 163 DA N6 H61 sing N N 164 DA N6 H62 sing N N 165 DA N1 C2 sing Y N 166 DA C2 N3 doub Y N 167 DA C2 H2 sing N N 168 DA N3 C4 sing Y N 169 DC OP3 P sing N N 170 DC OP3 HOP3 sing N N 171 DC P OP1 doub N N 172 DC P OP2 sing N N 173 DC P "O5'" sing N N 174 DC OP2 HOP2 sing N N 175 DC "O5'" "C5'" sing N N 176 DC "C5'" "C4'" sing N N 177 DC "C5'" "H5'" sing N N 178 DC "C5'" "H5''" sing N N 179 DC "C4'" "O4'" sing N N 180 DC "C4'" "C3'" sing N N 181 DC "C4'" "H4'" sing N N 182 DC "O4'" "C1'" sing N N 183 DC "C3'" "O3'" sing N N 184 DC "C3'" "C2'" sing N N 185 DC "C3'" "H3'" sing N N 186 DC "O3'" "HO3'" sing N N 187 DC "C2'" "C1'" sing N N 188 DC "C2'" "H2'" sing N N 189 DC "C2'" "H2''" sing N N 190 DC "C1'" N1 sing N N 191 DC "C1'" "H1'" sing N N 192 DC N1 C2 sing N N 193 DC N1 C6 sing N N 194 DC C2 O2 doub N N 195 DC C2 N3 sing N N 196 DC N3 C4 doub N N 197 DC C4 N4 sing N N 198 DC C4 C5 sing N N 199 DC N4 H41 sing N N 200 DC N4 H42 sing N N 201 DC C5 C6 doub N N 202 DC C5 H5 sing N N 203 DC C6 H6 sing N N 204 DG OP3 P sing N N 205 DG OP3 HOP3 sing N N 206 DG P OP1 doub N N 207 DG P OP2 sing N N 208 DG P "O5'" sing N N 209 DG OP2 HOP2 sing N N 210 DG "O5'" "C5'" sing N N 211 DG "C5'" "C4'" sing N N 212 DG "C5'" "H5'" sing N N 213 DG "C5'" "H5''" sing N N 214 DG "C4'" "O4'" sing N N 215 DG "C4'" "C3'" sing N N 216 DG "C4'" "H4'" sing N N 217 DG "O4'" "C1'" sing N N 218 DG "C3'" "O3'" sing N N 219 DG "C3'" "C2'" sing N N 220 DG "C3'" "H3'" sing N N 221 DG "O3'" "HO3'" sing N N 222 DG "C2'" "C1'" sing N N 223 DG "C2'" "H2'" sing N N 224 DG "C2'" "H2''" sing N N 225 DG "C1'" N9 sing N N 226 DG "C1'" "H1'" sing N N 227 DG N9 C8 sing Y N 228 DG N9 C4 sing Y N 229 DG C8 N7 doub Y N 230 DG C8 H8 sing N N 231 DG N7 C5 sing Y N 232 DG C5 C6 sing N N 233 DG C5 C4 doub Y N 234 DG C6 O6 doub N N 235 DG C6 N1 sing N N 236 DG N1 C2 sing N N 237 DG N1 H1 sing N N 238 DG C2 N2 sing N N 239 DG C2 N3 doub N N 240 DG N2 H21 sing N N 241 DG N2 H22 sing N N 242 DG N3 C4 sing N N 243 DGT PG O1G sing N N 244 DGT PG O2G sing N N 245 DGT O1G HO1G sing N N 246 DGT O2G HO2G sing N N 247 DGT O3G PG doub N N 248 DGT O3B PG sing N N 249 DGT PB O3B sing N N 250 DGT PB O1B sing N N 251 DGT PB O3A sing N N 252 DGT O1B HO1B sing N N 253 DGT O2B PB doub N N 254 DGT PA O3A sing N N 255 DGT PA O1A sing N N 256 DGT O1A HO1A sing N N 257 DGT O2A PA doub N N 258 DGT "O5'" PA sing N N 259 DGT "O5'" "C5'" sing N N 260 DGT "C5'" "H5'" sing N N 261 DGT "C5'" "H5'A" sing N N 262 DGT "C4'" "C5'" sing N N 263 DGT "C4'" "H4'" sing N N 264 DGT "O4'" "C4'" sing N N 265 DGT "C3'" "C4'" sing N N 266 DGT "C3'" "O3'" sing N N 267 DGT "C3'" "H3'" sing N N 268 DGT "O3'" "HO3'" sing N N 269 DGT "C2'" "C3'" sing N N 270 DGT "C2'" "C1'" sing N N 271 DGT "C2'" "H2'" sing N N 272 DGT "C2'" "H2'A" sing N N 273 DGT "C1'" "O4'" sing N N 274 DGT "C1'" "H1'" sing N N 275 DGT N9 "C1'" sing N N 276 DGT N9 C4 sing Y N 277 DGT C8 N9 sing Y N 278 DGT C8 H8 sing N N 279 DGT N7 C8 doub Y N 280 DGT N7 C5 sing Y N 281 DGT C5 C6 sing N N 282 DGT C5 C4 doub Y N 283 DGT C6 N1 sing N N 284 DGT O6 C6 doub N N 285 DGT N1 C2 sing N N 286 DGT C2 N3 doub N N 287 DGT C2 N2 sing N N 288 DGT N2 HN2 sing N N 289 DGT N2 HN2A sing N N 290 DGT C4 N3 sing N N 291 DGT N1 H16 sing N N 292 DT OP3 P sing N N 293 DT OP3 HOP3 sing N N 294 DT P OP1 doub N N 295 DT P OP2 sing N N 296 DT P "O5'" sing N N 297 DT OP2 HOP2 sing N N 298 DT "O5'" "C5'" sing N N 299 DT "C5'" "C4'" sing N N 300 DT "C5'" "H5'" sing N N 301 DT "C5'" "H5''" sing N N 302 DT "C4'" "O4'" sing N N 303 DT "C4'" "C3'" sing N N 304 DT "C4'" "H4'" sing N N 305 DT "O4'" "C1'" sing N N 306 DT "C3'" "O3'" sing N N 307 DT "C3'" "C2'" sing N N 308 DT "C3'" "H3'" sing N N 309 DT "O3'" "HO3'" sing N N 310 DT "C2'" "C1'" sing N N 311 DT "C2'" "H2'" sing N N 312 DT "C2'" "H2''" sing N N 313 DT "C1'" N1 sing N N 314 DT "C1'" "H1'" sing N N 315 DT N1 C2 sing N N 316 DT N1 C6 sing N N 317 DT C2 O2 doub N N 318 DT C2 N3 sing N N 319 DT N3 C4 sing N N 320 DT N3 H3 sing N N 321 DT C4 O4 doub N N 322 DT C4 C5 sing N N 323 DT C5 C7 sing N N 324 DT C5 C6 doub N N 325 DT C7 H71 sing N N 326 DT C7 H72 sing N N 327 DT C7 H73 sing N N 328 DT C6 H6 sing N N 329 GLN N CA sing N N 330 GLN N H sing N N 331 GLN N H2 sing N N 332 GLN CA C sing N N 333 GLN CA CB sing N N 334 GLN CA HA sing N N 335 GLN C O doub N N 336 GLN C OXT sing N N 337 GLN CB CG sing N N 338 GLN CB HB2 sing N N 339 GLN CB HB3 sing N N 340 GLN CG CD sing N N 341 GLN CG HG2 sing N N 342 GLN CG HG3 sing N N 343 GLN CD OE1 doub N N 344 GLN CD NE2 sing N N 345 GLN NE2 HE21 sing N N 346 GLN NE2 HE22 sing N N 347 GLN OXT HXT sing N N 348 GLU N CA sing N N 349 GLU N H sing N N 350 GLU N H2 sing N N 351 GLU CA C sing N N 352 GLU CA CB sing N N 353 GLU CA HA sing N N 354 GLU C O doub N N 355 GLU C OXT sing N N 356 GLU CB CG sing N N 357 GLU CB HB2 sing N N 358 GLU CB HB3 sing N N 359 GLU CG CD sing N N 360 GLU CG HG2 sing N N 361 GLU CG HG3 sing N N 362 GLU CD OE1 doub N N 363 GLU CD OE2 sing N N 364 GLU OE2 HE2 sing N N 365 GLU OXT HXT sing N N 366 GLY N CA sing N N 367 GLY N H sing N N 368 GLY N H2 sing N N 369 GLY CA C sing N N 370 GLY CA HA2 sing N N 371 GLY CA HA3 sing N N 372 GLY C O doub N N 373 GLY C OXT sing N N 374 GLY OXT HXT sing N N 375 HIS N CA sing N N 376 HIS N H sing N N 377 HIS N H2 sing N N 378 HIS CA C sing N N 379 HIS CA CB sing N N 380 HIS CA HA sing N N 381 HIS C O doub N N 382 HIS C OXT sing N N 383 HIS CB CG sing N N 384 HIS CB HB2 sing N N 385 HIS CB HB3 sing N N 386 HIS CG ND1 sing Y N 387 HIS CG CD2 doub Y N 388 HIS ND1 CE1 doub Y N 389 HIS ND1 HD1 sing N N 390 HIS CD2 NE2 sing Y N 391 HIS CD2 HD2 sing N N 392 HIS CE1 NE2 sing Y N 393 HIS CE1 HE1 sing N N 394 HIS NE2 HE2 sing N N 395 HIS OXT HXT sing N N 396 ILE N CA sing N N 397 ILE N H sing N N 398 ILE N H2 sing N N 399 ILE CA C sing N N 400 ILE CA CB sing N N 401 ILE CA HA sing N N 402 ILE C O doub N N 403 ILE C OXT sing N N 404 ILE CB CG1 sing N N 405 ILE CB CG2 sing N N 406 ILE CB HB sing N N 407 ILE CG1 CD1 sing N N 408 ILE CG1 HG12 sing N N 409 ILE CG1 HG13 sing N N 410 ILE CG2 HG21 sing N N 411 ILE CG2 HG22 sing N N 412 ILE CG2 HG23 sing N N 413 ILE CD1 HD11 sing N N 414 ILE CD1 HD12 sing N N 415 ILE CD1 HD13 sing N N 416 ILE OXT HXT sing N N 417 LEU N CA sing N N 418 LEU N H sing N N 419 LEU N H2 sing N N 420 LEU CA C sing N N 421 LEU CA CB sing N N 422 LEU CA HA sing N N 423 LEU C O doub N N 424 LEU C OXT sing N N 425 LEU CB CG sing N N 426 LEU CB HB2 sing N N 427 LEU CB HB3 sing N N 428 LEU CG CD1 sing N N 429 LEU CG CD2 sing N N 430 LEU CG HG sing N N 431 LEU CD1 HD11 sing N N 432 LEU CD1 HD12 sing N N 433 LEU CD1 HD13 sing N N 434 LEU CD2 HD21 sing N N 435 LEU CD2 HD22 sing N N 436 LEU CD2 HD23 sing N N 437 LEU OXT HXT sing N N 438 LYS N CA sing N N 439 LYS N H sing N N 440 LYS N H2 sing N N 441 LYS CA C sing N N 442 LYS CA CB sing N N 443 LYS CA HA sing N N 444 LYS C O doub N N 445 LYS C OXT sing N N 446 LYS CB CG sing N N 447 LYS CB HB2 sing N N 448 LYS CB HB3 sing N N 449 LYS CG CD sing N N 450 LYS CG HG2 sing N N 451 LYS CG HG3 sing N N 452 LYS CD CE sing N N 453 LYS CD HD2 sing N N 454 LYS CD HD3 sing N N 455 LYS CE NZ sing N N 456 LYS CE HE2 sing N N 457 LYS CE HE3 sing N N 458 LYS NZ HZ1 sing N N 459 LYS NZ HZ2 sing N N 460 LYS NZ HZ3 sing N N 461 LYS OXT HXT sing N N 462 MET N CA sing N N 463 MET N H sing N N 464 MET N H2 sing N N 465 MET CA C sing N N 466 MET CA CB sing N N 467 MET CA HA sing N N 468 MET C O doub N N 469 MET C OXT sing N N 470 MET CB CG sing N N 471 MET CB HB2 sing N N 472 MET CB HB3 sing N N 473 MET CG SD sing N N 474 MET CG HG2 sing N N 475 MET CG HG3 sing N N 476 MET SD CE sing N N 477 MET CE HE1 sing N N 478 MET CE HE2 sing N N 479 MET CE HE3 sing N N 480 MET OXT HXT sing N N 481 PHE N CA sing N N 482 PHE N H sing N N 483 PHE N H2 sing N N 484 PHE CA C sing N N 485 PHE CA CB sing N N 486 PHE CA HA sing N N 487 PHE C O doub N N 488 PHE C OXT sing N N 489 PHE CB CG sing N N 490 PHE CB HB2 sing N N 491 PHE CB HB3 sing N N 492 PHE CG CD1 doub Y N 493 PHE CG CD2 sing Y N 494 PHE CD1 CE1 sing Y N 495 PHE CD1 HD1 sing N N 496 PHE CD2 CE2 doub Y N 497 PHE CD2 HD2 sing N N 498 PHE CE1 CZ doub Y N 499 PHE CE1 HE1 sing N N 500 PHE CE2 CZ sing Y N 501 PHE CE2 HE2 sing N N 502 PHE CZ HZ sing N N 503 PHE OXT HXT sing N N 504 PRO N CA sing N N 505 PRO N CD sing N N 506 PRO N H sing N N 507 PRO CA C sing N N 508 PRO CA CB sing N N 509 PRO CA HA sing N N 510 PRO C O doub N N 511 PRO C OXT sing N N 512 PRO CB CG sing N N 513 PRO CB HB2 sing N N 514 PRO CB HB3 sing N N 515 PRO CG CD sing N N 516 PRO CG HG2 sing N N 517 PRO CG HG3 sing N N 518 PRO CD HD2 sing N N 519 PRO CD HD3 sing N N 520 PRO OXT HXT sing N N 521 SER N CA sing N N 522 SER N H sing N N 523 SER N H2 sing N N 524 SER CA C sing N N 525 SER CA CB sing N N 526 SER CA HA sing N N 527 SER C O doub N N 528 SER C OXT sing N N 529 SER CB OG sing N N 530 SER CB HB2 sing N N 531 SER CB HB3 sing N N 532 SER OG HG sing N N 533 SER OXT HXT sing N N 534 THR N CA sing N N 535 THR N H sing N N 536 THR N H2 sing N N 537 THR CA C sing N N 538 THR CA CB sing N N 539 THR CA HA sing N N 540 THR C O doub N N 541 THR C OXT sing N N 542 THR CB OG1 sing N N 543 THR CB CG2 sing N N 544 THR CB HB sing N N 545 THR OG1 HG1 sing N N 546 THR CG2 HG21 sing N N 547 THR CG2 HG22 sing N N 548 THR CG2 HG23 sing N N 549 THR OXT HXT sing N N 550 TRP N CA sing N N 551 TRP N H sing N N 552 TRP N H2 sing N N 553 TRP CA C sing N N 554 TRP CA CB sing N N 555 TRP CA HA sing N N 556 TRP C O doub N N 557 TRP C OXT sing N N 558 TRP CB CG sing N N 559 TRP CB HB2 sing N N 560 TRP CB HB3 sing N N 561 TRP CG CD1 doub Y N 562 TRP CG CD2 sing Y N 563 TRP CD1 NE1 sing Y N 564 TRP CD1 HD1 sing N N 565 TRP CD2 CE2 doub Y N 566 TRP CD2 CE3 sing Y N 567 TRP NE1 CE2 sing Y N 568 TRP NE1 HE1 sing N N 569 TRP CE2 CZ2 sing Y N 570 TRP CE3 CZ3 doub Y N 571 TRP CE3 HE3 sing N N 572 TRP CZ2 CH2 doub Y N 573 TRP CZ2 HZ2 sing N N 574 TRP CZ3 CH2 sing Y N 575 TRP CZ3 HZ3 sing N N 576 TRP CH2 HH2 sing N N 577 TRP OXT HXT sing N N 578 TYR N CA sing N N 579 TYR N H sing N N 580 TYR N H2 sing N N 581 TYR CA C sing N N 582 TYR CA CB sing N N 583 TYR CA HA sing N N 584 TYR C O doub N N 585 TYR C OXT sing N N 586 TYR CB CG sing N N 587 TYR CB HB2 sing N N 588 TYR CB HB3 sing N N 589 TYR CG CD1 doub Y N 590 TYR CG CD2 sing Y N 591 TYR CD1 CE1 sing Y N 592 TYR CD1 HD1 sing N N 593 TYR CD2 CE2 doub Y N 594 TYR CD2 HD2 sing N N 595 TYR CE1 CZ doub Y N 596 TYR CE1 HE1 sing N N 597 TYR CE2 CZ sing Y N 598 TYR CE2 HE2 sing N N 599 TYR CZ OH sing N N 600 TYR OH HH sing N N 601 TYR OXT HXT sing N N 602 VAL N CA sing N N 603 VAL N H sing N N 604 VAL N H2 sing N N 605 VAL CA C sing N N 606 VAL CA CB sing N N 607 VAL CA HA sing N N 608 VAL C O doub N N 609 VAL C OXT sing N N 610 VAL CB CG1 sing N N 611 VAL CB CG2 sing N N 612 VAL CB HB sing N N 613 VAL CG1 HG11 sing N N 614 VAL CG1 HG12 sing N N 615 VAL CG1 HG13 sing N N 616 VAL CG2 HG21 sing N N 617 VAL CG2 HG22 sing N N 618 VAL CG2 HG23 sing N N 619 VAL OXT HXT sing N N 620 # _ndb_struct_conf_na.entry_id 9RTJ _ndb_struct_conf_na.feature 'double helix' # _ndb_struct_na_base_pair.model_number 1 _ndb_struct_na_base_pair.i_label_asym_id B _ndb_struct_na_base_pair.i_label_comp_id DT _ndb_struct_na_base_pair.i_label_seq_id 7 _ndb_struct_na_base_pair.i_symmetry 1_555 _ndb_struct_na_base_pair.j_label_asym_id B _ndb_struct_na_base_pair.j_label_comp_id DA _ndb_struct_na_base_pair.j_label_seq_id 9 _ndb_struct_na_base_pair.j_symmetry 1_555 _ndb_struct_na_base_pair.shear 5.156 _ndb_struct_na_base_pair.stretch 1.040 _ndb_struct_na_base_pair.stagger 1.362 _ndb_struct_na_base_pair.buckle 40.223 _ndb_struct_na_base_pair.propeller 34.434 _ndb_struct_na_base_pair.opening 133.049 _ndb_struct_na_base_pair.pair_number 1 _ndb_struct_na_base_pair.pair_name A_DT7:DA9_A _ndb_struct_na_base_pair.i_auth_asym_id A _ndb_struct_na_base_pair.i_auth_seq_id 7 _ndb_struct_na_base_pair.i_PDB_ins_code ? _ndb_struct_na_base_pair.j_auth_asym_id A _ndb_struct_na_base_pair.j_auth_seq_id 9 _ndb_struct_na_base_pair.j_PDB_ins_code ? _ndb_struct_na_base_pair.hbond_type_28 ? _ndb_struct_na_base_pair.hbond_type_12 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Swiss National Science Foundation' Switzerland 163345 1 'Swiss National Science Foundation' Switzerland 185252 2 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE III HD' ? Bruker 900 ? 2 'AVANCE NEO' ? Bruker 700 ? 3 'AVANCE NEO' ? Bruker 600 ? 4 'AVANCE III' ? Bruker 500 ? 5 'AVANCE III' ? Bruker 850 ? # _atom_sites.entry_id 9RTJ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H MG N O P S # loop_ #