HEADER TRANSFERASE 08-JUL-25 9RVK TITLE CRYSTAL STRUCTURE OF AURORA-A BOUND TO DBL5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DBL5; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: AURORA KINASE A; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: AURORA 2,AURORA/IPL1-RELATED KINASE 1,ARK-1,AURORA-RELATED COMPND 9 KINASE 1,BREAST TUMOR-AMPLIFIED KINASE,IPL1- AND AURORA-RELATED COMPND 10 KINASE 1,SERINE/THREONINE-PROTEIN KINASE 15,SERINE/THREONINE-PROTEIN COMPND 11 KINASE 6,SERINE/THREONINE-PROTEIN KINASE AYK1,SERINE/THREONINE- COMPND 12 PROTEIN KINASE AURORA-A; COMPND 13 EC: 2.7.11.1; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 GENE: AURKA, AIK, AIRK1, ARK1, AURA, AYK1, BTAK, IAK1, STK15, STK6; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, COMPLEX, DESIGNED, INHIBITOR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.A.MILES,R.W.BAYLISS REVDAT 1 22-JUL-26 9RVK 0 JRNL AUTH J.A.MILES,B.SCHIFFRIN,J.HOLDER,E.J.WALLIS,I.W.MANFIELD, JRNL AUTH 2 S.A.BURNAP,W.B.STRUWE,F.GERGELY,R.BAYLISS JRNL TITL SELECTIVE MINIPROTEIN INHIBITORS OF AURORA-A KINASE DESIGNED JRNL TITL 2 USING INTERACTION-MOTIF SCAFFOLDING JRNL REF BIORXIV 2026 JRNL REFN ISSN 2692-8205 JRNL DOI 10.64898/2026.07.12.737516 REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0425 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 33458 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.994 REMARK 3 FREE R VALUE TEST SET COUNT : 1671 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.79 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2263 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.44 REMARK 3 BIN R VALUE (WORKING SET) : 0.3780 REMARK 3 BIN FREE R VALUE SET COUNT : 133 REMARK 3 BIN FREE R VALUE : 0.3530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2586 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 232 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.43600 REMARK 3 B22 (A**2) : 0.23600 REMARK 3 B33 (A**2) : -0.67200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.135 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.131 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.141 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.028 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2733 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3705 ; 1.787 ; 1.858 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 330 ; 6.248 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 21 ; 8.205 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 469 ;14.209 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 412 ; 0.113 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2047 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1345 ; 0.222 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1850 ; 0.314 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 218 ; 0.177 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1308 ; 1.848 ; 2.241 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1636 ; 2.918 ; 4.011 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1425 ; 3.294 ; 2.597 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2067 ; 5.126 ; 4.586 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Ap -1 Ap 58 REMARK 3 ORIGIN FOR THE GROUP (A): 33.1245 -10.6416 -6.4317 REMARK 3 T TENSOR REMARK 3 T11: 0.2325 T22: 0.2503 REMARK 3 T33: 0.2178 T12: 0.0443 REMARK 3 T13: -0.0439 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 4.7693 L22: 0.8227 REMARK 3 L33: 6.1952 L12: 0.0301 REMARK 3 L13: 3.4391 L23: -0.5052 REMARK 3 S TENSOR REMARK 3 S11: 0.2538 S12: 0.0265 S13: -0.3942 REMARK 3 S21: 0.3050 S22: -0.0284 S23: -0.1710 REMARK 3 S31: 0.3460 S32: 0.2917 S33: -0.2253 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): 13.1186 -8.6426 -23.6090 REMARK 3 T TENSOR REMARK 3 T11: 0.0187 T22: 0.1180 REMARK 3 T33: 0.0197 T12: -0.0094 REMARK 3 T13: 0.0021 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 0.8817 L22: 1.2893 REMARK 3 L33: 3.0248 L12: -0.3579 REMARK 3 L13: -0.2308 L23: 1.1331 REMARK 3 S TENSOR REMARK 3 S11: -0.0203 S12: -0.0076 S13: -0.1182 REMARK 3 S21: 0.0278 S22: -0.0205 S23: 0.0014 REMARK 3 S31: 0.1114 S32: -0.0046 S33: 0.0408 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE NOT BEEN USED REMARK 4 REMARK 4 9RVK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-JUL-25. REMARK 100 THE DEPOSITION ID IS D_1292149228. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 R 1M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33504 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.789 REMARK 200 RESOLUTION RANGE LOW (A) : 56.770 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS PH 8.5, 0.1M BICINE PH 8.5, REMARK 280 12.5% MPD, 12.5% PEG 1000, 12.5% PEG 3350, 0.03M SODIUM FLUORIDE, REMARK 280 0.03M SODIUM BROMIDE, 0.03M SODIUM IODIDE., VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.38300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.61300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.42600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.61300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.38300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.42600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 HIS A -2 REMARK 465 LEU A 59 REMARK 465 GLU A 60 REMARK 465 ALA A 61 REMARK 465 GLU B 122 REMARK 465 SER B 123 REMARK 465 LYS B 124 REMARK 465 LYS B 125 REMARK 465 PRO B 390 REMARK 465 SER B 391 REMARK 465 ASN B 392 REMARK 465 ALA B 393 REMARK 465 GLN B 394 REMARK 465 ASN B 395 REMARK 465 LYS B 396 REMARK 465 GLU B 397 REMARK 465 SER B 398 REMARK 465 ALA B 399 REMARK 465 SER B 400 REMARK 465 LYS B 401 REMARK 465 GLN B 402 REMARK 465 SER B 403 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 3 CG CD OE1 OE2 REMARK 470 ARG A 15 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 18 CG CD CE NZ REMARK 470 LEU A 19 CG CD1 CD2 REMARK 470 GLU A 39 CG CD OE1 OE2 REMARK 470 ARG A 54 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 126 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 180 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 183 CG CD OE1 OE2 REMARK 470 GLU B 354 CG CD OE1 OE2 REMARK 470 ARG B 375 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 389 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 302 NH1 ARG B 304 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN B 332 CB - CA - C ANGL. DEV. = -15.2 DEGREES REMARK 500 MET B 373 CG - SD - CE ANGL. DEV. = 12.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 36 125.08 179.79 REMARK 500 ASP B 202 -161.66 -129.72 REMARK 500 SER B 226 -56.56 82.73 REMARK 500 ASP B 256 45.37 -144.88 REMARK 500 ASN B 274 71.84 63.08 REMARK 500 VAL B 344 66.35 38.89 REMARK 500 LEU B 364 52.31 -95.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 286 0.10 SIDE CHAIN REMARK 500 ARG B 371 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 9RVK A -3 61 PDB 9RVK 9RVK -3 61 DBREF 9RVK B 122 403 UNP O14965 AURKA_HUMAN 122 403 SEQADV 9RVK ASN B 274 UNP O14965 ASP 274 CONFLICT SEQADV 9RVK ALA B 290 UNP O14965 CYS 290 CONFLICT SEQADV 9RVK ALA B 393 UNP O14965 CYS 393 CONFLICT SEQRES 1 A 65 GLY HIS MET GLY GLU ARG GLU GLU LEU ILE LYS ARG ILE SEQRES 2 A 65 ASP GLU VAL LEU ALA ARG ALA ALA LYS LEU GLY ALA LEU SEQRES 3 A 65 PRO GLU TRP VAL ILE LYS ILE PHE GLU GLU PHE LYS ALA SEQRES 4 A 65 LYS GLY GLY GLU GLU ALA GLU GLU ILE VAL LYS THR LEU SEQRES 5 A 65 ILE GLU ALA VAL GLU ARG HIS ASN ALA ALA LEU GLU ALA SEQRES 1 B 282 GLU SER LYS LYS ARG GLN TRP ALA LEU GLU ASP PHE GLU SEQRES 2 B 282 ILE GLY ARG PRO LEU GLY LYS GLY LYS PHE GLY ASN VAL SEQRES 3 B 282 TYR LEU ALA ARG GLU LYS GLN SER LYS PHE ILE LEU ALA SEQRES 4 B 282 LEU LYS VAL LEU PHE LYS ALA GLN LEU GLU LYS ALA GLY SEQRES 5 B 282 VAL GLU HIS GLN LEU ARG ARG GLU VAL GLU ILE GLN SER SEQRES 6 B 282 HIS LEU ARG HIS PRO ASN ILE LEU ARG LEU TYR GLY TYR SEQRES 7 B 282 PHE HIS ASP ALA THR ARG VAL TYR LEU ILE LEU GLU TYR SEQRES 8 B 282 ALA PRO LEU GLY THR VAL TYR ARG GLU LEU GLN LYS LEU SEQRES 9 B 282 SER LYS PHE ASP GLU GLN ARG THR ALA THR TYR ILE THR SEQRES 10 B 282 GLU LEU ALA ASN ALA LEU SER TYR CYS HIS SER LYS ARG SEQRES 11 B 282 VAL ILE HIS ARG ASP ILE LYS PRO GLU ASN LEU LEU LEU SEQRES 12 B 282 GLY SER ALA GLY GLU LEU LYS ILE ALA ASN PHE GLY TRP SEQRES 13 B 282 SER VAL HIS ALA PRO SER SER ARG ARG THR THR LEU ALA SEQRES 14 B 282 GLY THR LEU ASP TYR LEU PRO PRO GLU MET ILE GLU GLY SEQRES 15 B 282 ARG MET HIS ASP GLU LYS VAL ASP LEU TRP SER LEU GLY SEQRES 16 B 282 VAL LEU CYS TYR GLU PHE LEU VAL GLY LYS PRO PRO PHE SEQRES 17 B 282 GLU ALA ASN THR TYR GLN GLU THR TYR LYS ARG ILE SER SEQRES 18 B 282 ARG VAL GLU PHE THR PHE PRO ASP PHE VAL THR GLU GLY SEQRES 19 B 282 ALA ARG ASP LEU ILE SER ARG LEU LEU LYS HIS ASN PRO SEQRES 20 B 282 SER GLN ARG PRO MET LEU ARG GLU VAL LEU GLU HIS PRO SEQRES 21 B 282 TRP ILE THR ALA ASN SER SER LYS PRO SER ASN ALA GLN SEQRES 22 B 282 ASN LYS GLU SER ALA SER LYS GLN SER HET CL A 101 1 HET ADP B 501 27 HET GOL B 502 6 HET GOL B 503 6 HET MPD B 504 8 HET MPD B 505 8 HET GOL B 506 6 HET CL B 507 1 HETNAM CL CHLORIDE ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CL 2(CL 1-) FORMUL 4 ADP C10 H15 N5 O10 P2 FORMUL 5 GOL 3(C3 H8 O3) FORMUL 7 MPD 2(C6 H14 O2) FORMUL 11 HOH *232(H2 O) HELIX 1 AA1 GLY A 0 LYS A 18 1 19 HELIX 2 AA2 PRO A 23 LYS A 36 1 14 HELIX 3 AA3 GLY A 38 ALA A 58 1 21 HELIX 4 AA4 ALA B 129 GLU B 131 5 3 HELIX 5 AA5 LYS B 166 GLY B 173 1 8 HELIX 6 AA6 VAL B 174 SER B 186 1 13 HELIX 7 AA7 THR B 217 SER B 226 1 10 HELIX 8 AA8 ASP B 229 LYS B 250 1 22 HELIX 9 AA9 LYS B 258 GLU B 260 5 3 HELIX 10 AB1 PRO B 282 SER B 284 5 3 HELIX 11 AB2 THR B 292 LEU B 296 5 5 HELIX 12 AB3 PRO B 297 GLU B 302 1 6 HELIX 13 AB4 GLU B 308 GLY B 325 1 18 HELIX 14 AB5 THR B 333 ARG B 343 1 11 HELIX 15 AB6 THR B 353 LEU B 364 1 12 HELIX 16 AB7 ASN B 367 ARG B 371 5 5 HELIX 17 AB8 MET B 373 GLU B 379 1 7 HELIX 18 AB9 HIS B 380 SER B 387 1 8 SHEET 1 AA1 5 PHE B 133 LYS B 141 0 SHEET 2 AA1 5 ASN B 146 GLU B 152 -1 O VAL B 147 N LEU B 139 SHEET 3 AA1 5 ILE B 158 PHE B 165 -1 O VAL B 163 N ASN B 146 SHEET 4 AA1 5 ARG B 205 LEU B 210 -1 O LEU B 210 N ALA B 160 SHEET 5 AA1 5 LEU B 196 HIS B 201 -1 N PHE B 200 O TYR B 207 SHEET 1 AA2 2 VAL B 252 ILE B 253 0 SHEET 2 AA2 2 VAL B 279 HIS B 280 -1 O VAL B 279 N ILE B 253 SHEET 1 AA3 2 LEU B 262 LEU B 264 0 SHEET 2 AA3 2 LEU B 270 ILE B 272 -1 O LYS B 271 N LEU B 263 CRYST1 56.766 68.852 89.226 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017616 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014524 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011207 0.00000 CONECT 2615 2616 2617 2618 2622 CONECT 2616 2615 CONECT 2617 2615 CONECT 2618 2615 CONECT 2619 2620 2621 2622 2623 CONECT 2620 2619 CONECT 2621 2619 CONECT 2622 2615 2619 CONECT 2623 2619 2624 CONECT 2624 2623 2625 CONECT 2625 2624 2626 2627 CONECT 2626 2625 2631 CONECT 2627 2625 2628 2629 CONECT 2628 2627 CONECT 2629 2627 2630 2631 CONECT 2630 2629 CONECT 2631 2626 2629 2632 CONECT 2632 2631 2633 2641 CONECT 2633 2632 2634 CONECT 2634 2633 2635 CONECT 2635 2634 2636 2641 CONECT 2636 2635 2637 2638 CONECT 2637 2636 CONECT 2638 2636 2639 CONECT 2639 2638 2640 CONECT 2640 2639 2641 CONECT 2641 2632 2635 2640 CONECT 2642 2643 2644 CONECT 2643 2642 CONECT 2644 2642 2645 2646 CONECT 2645 2644 CONECT 2646 2644 2647 CONECT 2647 2646 CONECT 2648 2649 2650 CONECT 2649 2648 CONECT 2650 2648 2651 2652 CONECT 2651 2650 CONECT 2652 2650 2653 CONECT 2653 2652 CONECT 2654 2655 CONECT 2655 2654 2656 2657 2658 CONECT 2656 2655 CONECT 2657 2655 CONECT 2658 2655 2659 CONECT 2659 2658 2660 2661 CONECT 2660 2659 CONECT 2661 2659 CONECT 2662 2663 CONECT 2663 2662 2664 2665 2666 CONECT 2664 2663 CONECT 2665 2663 CONECT 2666 2663 2667 CONECT 2667 2666 2668 2669 CONECT 2668 2667 CONECT 2669 2667 CONECT 2670 2671 2672 CONECT 2671 2670 CONECT 2672 2670 2673 2674 CONECT 2673 2672 CONECT 2674 2672 2675 CONECT 2675 2674 MASTER 389 0 8 18 9 0 0 6 2881 2 61 27 END